AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0279390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0279390 MtrunA17_Chr2g0292751 90.923 1344 62 5 1 1290 1 1338 0.0 2394
Msa0279390 MtrunA17_Chr8g0380401 49.409 761 362 11 533 1281 627 1376 0.0 728
Msa0279390 MtrunA17_Chr2g0292401 46.389 720 361 9 577 1281 132 841 0.0 645
Msa0279390 MtrunA17_Chr4g0064571 43.626 706 372 11 581 1278 101 788 0.0 560
Msa0279390 MtrunA17_Chr4g0067361 44.776 335 170 4 577 903 549 876 1.10e-78 279
Msa0279390 MtrunA17_Chr7g0254961 35.249 261 144 5 656 905 39 285 2.61e-33 132
Msa0279390 MtrunA17_Chr3g0126061 33.858 254 149 4 656 898 40 285 3.56e-32 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0279390 AT2G16640.2 78.647 754 159 2 536 1288 454 1206 0.0 1209
Msa0279390 AT2G16640.1 78.647 754 159 2 536 1288 454 1206 0.0 1209
Msa0279390 AT2G16640.3 78.647 754 159 2 536 1288 454 1206 0.0 1209
Msa0279390 AT3G16620.1 75.316 790 192 2 501 1288 301 1089 0.0 1207
Msa0279390 AT4G02510.1 50.000 754 355 8 533 1273 739 1483 0.0 743
Msa0279390 AT4G02510.4 50.000 754 355 8 533 1273 739 1483 0.0 743
Msa0279390 AT4G02510.3 50.000 754 355 8 533 1273 739 1483 0.0 743
Msa0279390 AT4G02510.2 50.000 754 355 8 533 1273 739 1483 0.0 743
Msa0279390 AT5G20300.4 42.857 700 372 10 585 1278 94 771 3.55e-174 536
Msa0279390 AT5G20300.1 42.857 700 372 10 585 1278 94 771 3.55e-174 536
Msa0279390 AT5G20300.5 42.857 700 372 10 585 1278 94 771 3.55e-174 536
Msa0279390 AT5G20300.2 42.857 700 372 10 585 1278 94 771 3.55e-174 536
Msa0279390 AT5G20300.3 43.364 648 340 9 636 1278 18 643 2.18e-165 509
Msa0279390 AT5G05000.1 33.210 271 160 6 656 917 38 296 6.93e-33 130
Msa0279390 AT5G05000.2 33.210 271 160 6 656 917 38 296 6.93e-33 130
Msa0279390 AT5G05000.3 33.210 271 160 6 656 917 38 296 6.93e-33 130
Msa0279390 AT1G02280.1 35.577 208 119 4 656 857 36 234 2.68e-28 117
Msa0279390 AT1G02280.2 35.577 208 119 4 656 857 36 234 2.68e-28 117
Msa0279390 AT4G15810.1 35.948 153 92 3 577 728 554 701 6.87e-17 87.0

Find 319 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTACTTAAGAAGGTTAT+TGG 0.154134 2_3:-13239610 Msa0279390:CDS
GCCTTTGTCAAAGGTTTAAA+TGG 0.175703 2_3:+13240603 None:intergenic
TGATGGAAGCACGGTGTTTC+AGG 0.207753 2_3:-13242926 Msa0279390:CDS
GATGAGTTGCATACAGAATT+TGG 0.215641 2_3:-13242763 Msa0279390:CDS
TCAGATTCGGTTGATGAAAT+TGG 0.235296 2_3:-13243198 Msa0279390:CDS
CACCAGGACTTCTACCTTCT+TGG 0.250044 2_3:-13241292 Msa0279390:CDS
TCTTGTACAATAATGGTTCT+TGG 0.250796 2_3:-13241458 Msa0279390:CDS
GTATCCTTGTGGATTATATC+AGG 0.262750 2_3:+13242511 None:intergenic
TGGAACTGCTGCTCCATTAC+TGG 0.276869 2_3:-13241813 Msa0279390:CDS
TGATTTCTCTTGTACAATAA+TGG 0.277505 2_3:-13241465 Msa0279390:CDS
AACGCTTGGGCTTTCTGTTA+TGG 0.278806 2_3:-13239800 Msa0279390:CDS
ATCTAATGAGTCGAAGAATT+TGG 0.280838 2_3:-13243361 Msa0279390:CDS
ACAAAATGGTGGCATGGTTT+TGG 0.281784 2_3:-13242821 Msa0279390:CDS
TCTAGATAAAGCACAATATC+TGG 0.289541 2_3:+13241206 None:intergenic
TTGTAACTTTCGGAGAAATA+AGG 0.290524 2_3:-13240022 Msa0279390:CDS
TTGCGGCTGGCTAATAGGTT+TGG 0.294610 2_3:-13241644 Msa0279390:CDS
GATCCCAGCCGTGAGTTTCT+AGG 0.299890 2_3:+13240271 None:intergenic
TGGTCTCTCATTTACTCTCT+TGG 0.305717 2_3:-13239992 Msa0279390:CDS
CAGCTTCAAATTGCTTTGAT+TGG 0.306661 2_3:-13239640 Msa0279390:CDS
TAATACACAGTCCCAGAAAA+TGG 0.306853 2_3:-13241741 Msa0279390:CDS
AGGAGGATCTTCTCCGGCTT+TGG 0.310758 2_3:-13242149 Msa0279390:CDS
AGCCCCACGATTGTTCAAAT+TGG 0.328584 2_3:+13239696 None:intergenic
CTTGTTCGTCCTGTTGGCCT+TGG 0.328627 2_3:-13241833 Msa0279390:CDS
CGATTCAAGTTGGTTATTGC+TGG 0.329064 2_3:-13239916 Msa0279390:CDS
AGATGAAGTGATTGATAATC+AGG 0.330393 2_3:-13243094 Msa0279390:CDS
CATGAAAACTTATCTGTTGT+TGG 0.332063 2_3:-13242193 Msa0279390:CDS
ATGACAAGTTCGGTTAAATA+TGG 0.336645 2_3:-13240129 Msa0279390:CDS
GAGAGAAACTTCAAATGATT+AGG 0.338120 2_3:-13241676 Msa0279390:CDS
GCACAAGTTCTTTATAGATT+AGG 0.340685 2_3:-13241596 Msa0279390:CDS
TCAAGTTACCAAGGATAAAA+AGG 0.342407 2_3:-13240172 Msa0279390:CDS
TAGTTCATTGCCTTCGGATT+TGG 0.347792 2_3:-13243253 Msa0279390:CDS
TAGCAAAAGAACTTTCTGAT+AGG 0.348073 2_3:+13242305 None:intergenic
CTCTAGAAAGGTTTCTGATC+TGG 0.348391 2_3:+13240580 None:intergenic
TGTAACAAACATGTCATAAC+TGG 0.350273 2_3:+13241034 None:intergenic
GGTGATGATGTTGATGTTGC+TGG 0.358023 2_3:-13243282 Msa0279390:CDS
CTTGATGAACCATCAGATTC+TGG 0.358260 2_3:-13240654 Msa0279390:CDS
TGCGGCTGGCTAATAGGTTT+GGG 0.360103 2_3:-13241643 Msa0279390:CDS
TGCTGTTAGTTCATTGCCTT+CGG 0.360797 2_3:-13243259 Msa0279390:CDS
GGTCTCTCATTTACTCTCTT+GGG 0.362556 2_3:-13239991 Msa0279390:CDS
GAGGAACAGTTCAATGCTTC+AGG 0.363743 2_3:-13242652 Msa0279390:CDS
GGTTTCCAAACCTGCCCATT+AGG 0.365668 2_3:+13240885 None:intergenic
CCTTCTTAAGTAGAGGGATT+AGG 0.368598 2_3:+13239617 None:intergenic
AAAGATCTGCCAGGTGACTA+TGG 0.369869 2_3:-13240441 Msa0279390:CDS
AGAAACCAGGGTGCTGAGGC+TGG 0.374274 2_3:-13242724 Msa0279390:CDS
TGTTGCCTAATGGGCAGGTT+TGG 0.375329 2_3:-13240890 Msa0279390:CDS
GACAAAGAGTGTTGCCTAAT+GGG 0.376896 2_3:-13240899 Msa0279390:CDS
TAATGAGATGACATCTGTTC+AGG 0.376944 2_3:-13242068 Msa0279390:CDS
TCATCTTGAATTTCACTAGA+AGG 0.380602 2_3:+13242625 None:intergenic
AGCAACTTAGAGGGAGGAAT+GGG 0.381160 2_3:-13241565 Msa0279390:CDS
GATTATCAAAATGCTTTAAC+GGG 0.383033 2_3:+13243307 None:intergenic
GCTCTTGTGCGCGCTGTGTA+AGG 0.385193 2_3:+13240777 None:intergenic
CACAATAGCATTGAACCATA+TGG 0.386101 2_3:+13241109 None:intergenic
GTGGTTGAGGAGAGTGTTGT+GGG 0.386273 2_3:-13243384 Msa0279390:CDS
TGGTGATAACGTAGAAGAAT+TGG 0.386738 2_3:-13243178 Msa0279390:CDS
CTAGGGTTGCGCAGCAGCCA+CGG 0.389819 2_3:-13241781 Msa0279390:CDS
AGTGAGCTTGATTCCTCATC+TGG 0.393385 2_3:-13241881 Msa0279390:CDS
TTCTCTTTCATGTTATTCTC+AGG 0.394149 2_3:+13241935 None:intergenic
CTGATCTGGGCCTTTGTCAA+AGG 0.403414 2_3:+13240594 None:intergenic
CCTTTGTCAAAGGTTTAAAT+GGG 0.403885 2_3:+13240604 None:intergenic
AGATTATCAAAATGCTTTAA+CGG 0.405699 2_3:+13243306 None:intergenic
GAAGGGAAAGCAACGTCGTT+AGG 0.406551 2_3:-13240105 Msa0279390:CDS
ACCCCGCTTGTTCGTCCTGT+TGG 0.408539 2_3:-13241839 Msa0279390:CDS
CGTATCAAATTCAGAGCATC+TGG 0.409650 2_3:-13242404 Msa0279390:CDS
GGACAAAGAGTGTTGCCTAA+TGG 0.412007 2_3:-13240900 Msa0279390:CDS
GAAGCAGGCAAGGACATATC+AGG 0.412338 2_3:+13240366 None:intergenic
TAACTGGAAGGAGTACCATT+AGG 0.415307 2_3:+13241050 None:intergenic
GGATGTTGTGGGCATGGTAC+AGG 0.418124 2_3:-13241339 Msa0279390:CDS
GGATCTTCTCATTGTGTGGC+TGG 0.420130 2_3:+13241264 None:intergenic
CTCTTGGGTGATGCCTTGTC+AGG 0.420714 2_3:-13239976 Msa0279390:CDS
TGACGAGGTTAAATTTAATA+CGG 0.420737 2_3:-13241393 Msa0279390:CDS
TAGTTCATTGCCTTCAGATT+CGG 0.421641 2_3:-13243211 Msa0279390:CDS
AGAAGTGAAGCGATTGAAAC+AGG 0.423033 2_3:-13242169 Msa0279390:CDS
AGAGAAACTTCAAATGATTA+GGG 0.425915 2_3:-13241675 Msa0279390:CDS
CTGGTTTCTCATTTCCTCAT+CGG 0.428605 2_3:+13242738 None:intergenic
GGACTGGCTGAGCAACTTAG+AGG 0.428821 2_3:-13241575 Msa0279390:CDS
GCTCCACCTGATGGCCCTAA+TGG 0.430616 2_3:-13241065 Msa0279390:CDS
CTTTCTTCTGAGCTCTAGAA+AGG 0.433217 2_3:+13240568 None:intergenic
CCTAATCCCTCTACTTAAGA+AGG 0.435437 2_3:-13239617 Msa0279390:CDS
TTGGGCTTTCTGTTATGGAT+TGG 0.441505 2_3:-13239795 Msa0279390:CDS
CATTACTGGAACCTGCTCCT+AGG 0.444131 2_3:-13241799 Msa0279390:CDS
TGTTGCTTATGGTGGCAGTT+TGG 0.446772 2_3:-13239869 Msa0279390:CDS
GCAGCAGTTCCAAGGCCAAC+AGG 0.449389 2_3:+13241824 None:intergenic
GGTGGTTGAGGAGAGTGTTG+TGG 0.449518 2_3:-13243385 Msa0279390:CDS
AACTGGAAGGAGTACCATTA+GGG 0.450555 2_3:+13241051 None:intergenic
GACATATCAGGCATGGGAAC+AGG 0.454273 2_3:+13240378 None:intergenic
GCTTCCATCAGTGTTTAAAT+CGG 0.455577 2_3:+13242939 None:intergenic
CGTGGCTGCTGCGCAACCCT+AGG 0.455654 2_3:+13241782 None:intergenic
TCGTCGCTGAATTGCTCCTC+TGG 0.460298 2_3:+13240696 None:intergenic
GGGCGTGATGATGTTGCTTA+TGG 0.460856 2_3:-13239880 Msa0279390:CDS
CTTCTCCGGCTTTGGATGAA+AGG 0.461615 2_3:-13242141 Msa0279390:CDS
CTGAATCAGCTGCAGTAGCC+TGG 0.463279 2_3:+13242266 None:intergenic
AATTTGAACAATCGTGGGGC+TGG 0.464858 2_3:-13239694 Msa0279390:CDS
TGCTGCGCAACCCTAGGAGC+AGG 0.465414 2_3:+13241788 None:intergenic
AGTGAAATTCAAGATGATAC+AGG 0.466338 2_3:-13242619 Msa0279390:CDS
TGGCATGGAGATCTTGCTGT+TGG 0.466753 2_3:-13239775 Msa0279390:CDS
ATAATGGTTCTTGGAAAGTC+AGG 0.467829 2_3:-13241449 Msa0279390:CDS
GGCATGGAGATCTTGCTGTT+GGG 0.467831 2_3:-13239774 Msa0279390:CDS
ATCTTGTCATCTCCAACATC+AGG 0.470161 2_3:+13242676 None:intergenic
GATGAAGGAAATGGCAGAAT+CGG 0.472313 2_3:-13240466 Msa0279390:CDS
TGGTTCTCCACCAACGATAC+AGG 0.473339 2_3:+13240948 None:intergenic
ATTGCTGGTGGTGCAATGAC+AGG 0.473686 2_3:-13239901 Msa0279390:CDS
GACGCTCATTATCAACGCTT+GGG 0.473748 2_3:-13239813 Msa0279390:CDS
TGATTGTAGTGGAGGAAAGG+AGG 0.474011 2_3:-13242968 Msa0279390:CDS
GGAGTACCATTAGGGCCATC+AGG 0.474067 2_3:+13241059 None:intergenic
AGCAAAAGAACTTTCTGATA+GGG 0.474144 2_3:+13242306 None:intergenic
GGACGCTCATTATCAACGCT+TGG 0.474591 2_3:-13239814 Msa0279390:CDS
TCTAGAAAGGTTTCTGATCT+GGG 0.475614 2_3:+13240581 None:intergenic
ATTACTGGAACCTGCTCCTA+GGG 0.477039 2_3:-13241798 Msa0279390:CDS
TGAGTATTTAGAACCTCGTC+AGG 0.478313 2_3:-13242569 Msa0279390:CDS
CTCTGCATGTAGAACTAATA+CGG 0.479893 2_3:-13240925 Msa0279390:CDS
CTTTGTCATCTGTATCCTTG+TGG 0.480341 2_3:+13242500 None:intergenic
CAAGCCATTCGTCAAGCAGC+TGG 0.483656 2_3:-13240990 Msa0279390:CDS
CGAGTCTCATCAGATTCCTC+AGG 0.483717 2_3:+13241698 None:intergenic
CCCATTTAAACCTTTGACAA+AGG 0.487031 2_3:-13240604 Msa0279390:CDS
GCGGAAGATGATGAAGGAAA+TGG 0.488326 2_3:-13240475 Msa0279390:CDS
TGGTACAGGGCATTAAAGTC+CGG 0.488906 2_3:-13241325 Msa0279390:CDS
CTTCATTAGAAATCTGAGAC+AGG 0.491704 2_3:+13242008 None:intergenic
GATGGATAATGAAGGAGAAA+AGG 0.491792 2_3:-13243424 Msa0279390:CDS
AAGAGTGTTGCCTAATGGGC+AGG 0.494822 2_3:-13240895 Msa0279390:CDS
GTTCTTGGAAAGTCAGGAGT+TGG 0.496093 2_3:-13241443 Msa0279390:CDS
ATTGCGGCCTTGACTGCAGA+AGG 0.496741 2_3:+13240727 None:intergenic
GACCAAGAAGGTAGAAGTCC+TGG 0.501003 2_3:+13241290 None:intergenic
CTAGGAGCAGGTTCCAGTAA+TGG 0.502017 2_3:+13241800 None:intergenic
GCAGCATCGGCTCCACCTGA+TGG 0.502641 2_3:-13241074 Msa0279390:CDS
TCAGATGGAAATGACAAGTT+CGG 0.504112 2_3:-13240139 Msa0279390:CDS
GGCCAACAGGACGAACAAGC+GGG 0.509500 2_3:+13241837 None:intergenic
GGAGGAGTCTGTGGATCAGC+AGG 0.509774 2_3:-13243073 Msa0279390:CDS
TGTCATCCCTTCTGCAGTCA+AGG 0.510685 2_3:-13240734 Msa0279390:CDS
ACTGCAGCTGATTCAGAAGA+AGG 0.511631 2_3:-13242259 Msa0279390:CDS
TGCTTATGGTGGCAGTTTGG+AGG 0.512235 2_3:-13239866 Msa0279390:CDS
CTTTCTGTTATGGATTGGCA+TGG 0.513103 2_3:-13239790 Msa0279390:CDS
TTACAATCACAAATTCCCAT+TGG 0.513109 2_3:-13239745 Msa0279390:CDS
ACCTGCTGATTCGAGTTGCT+CGG 0.514205 2_3:+13241499 None:intergenic
CAGATGCTCTGAATTTGATA+CGG 0.517290 2_3:+13242405 None:intergenic
TGAGGAATCGTATGGTATCA+AGG 0.517359 2_3:-13242992 Msa0279390:CDS
CTGTCCTAGAAACTCACGGC+TGG 0.518300 2_3:-13240275 Msa0279390:CDS
AGAAAAGTGATTGAAACCTC+TGG 0.519662 2_3:-13242337 Msa0279390:CDS
TATGAATCCTGTATCGTTGG+TGG 0.521089 2_3:-13240955 Msa0279390:CDS
TAGGGTTGCGCAGCAGCCAC+GGG 0.521176 2_3:-13241780 Msa0279390:CDS
ATAGATTAGATATGCAGAGC+CGG 0.522387 2_3:-13241184 Msa0279390:CDS
CAATAACCTTCTTAAGTAGA+GGG 0.523046 2_3:+13239611 None:intergenic
CATATGGTTCAATGCTATTG+TGG 0.523137 2_3:-13241108 Msa0279390:CDS
TGCTAATAAGCGATTCAAGT+TGG 0.523977 2_3:-13239926 Msa0279390:CDS
TTCCTCAGGCTCCGCAGTTG+AGG 0.524205 2_3:+13241712 None:intergenic
AGTAGGATCTTCTCTGGCCG+TGG 0.524458 2_3:-13242365 Msa0279390:CDS
TTTGTGACGCCTAGACAAAA+TGG 0.527842 2_3:-13242835 Msa0279390:CDS
GAGGGCAGAGACTTGGTGAA+TGG 0.528172 2_3:-13242904 Msa0279390:CDS
GTATCAGAATCGAAGGAAGC+AGG 0.528219 2_3:+13240351 None:intergenic
GAAGAATTTGGAAGGAGATG+AGG 0.528525 2_3:-13243349 Msa0279390:CDS
GTTTCAGGAGGGCAGAGACT+TGG 0.529924 2_3:-13242911 Msa0279390:CDS
ACTTTCCTTTCATCCAAAGC+CGG 0.530295 2_3:+13242136 None:intergenic
ACTTTAATTGTTTCTTCATG+AGG 0.532998 2_3:+13240511 None:intergenic
CGATGAGGAAATGAGAAACC+AGG 0.533492 2_3:-13242737 Msa0279390:CDS
GGATGATTGTAGTGGAGGAA+AGG 0.534840 2_3:-13242971 Msa0279390:CDS
GCATGTAGAACTAATACGGC+TGG 0.535142 2_3:-13240921 Msa0279390:CDS
ACAATAGCATTGAACCATAT+GGG 0.536181 2_3:+13241110 None:intergenic
CTTCATTAGAAATCTCAGAC+TGG 0.539648 2_3:+13242221 None:intergenic
CCAATAACCTTCTTAAGTAG+AGG 0.541542 2_3:+13239610 None:intergenic
TAGATTAGATATGCAGAGCC+GGG 0.541828 2_3:-13241183 Msa0279390:CDS
TGATTCAGAAGAAGGGAGTA+CGG 0.541843 2_3:-13242251 Msa0279390:CDS
GACTTGGTGAATGGAAACTC+AGG 0.542609 2_3:-13242895 Msa0279390:CDS
AATCACAAATTCCCATTGGA+CGG 0.544278 2_3:-13239741 Msa0279390:CDS
CAGCCGTGAGTTTCTAGGAC+AGG 0.544541 2_3:+13240276 None:intergenic
TGATACGGTGTCATCCTCCT+CGG 0.545240 2_3:+13242420 None:intergenic
TGAAACAGGAGGATCTTCTC+CGG 0.547289 2_3:-13242155 Msa0279390:CDS
CTTTGATCGTGCAAGTGCGA+TGG 0.547563 2_3:-13241522 Msa0279390:CDS
AGTTCGGTTAAATATGGAGA+AGG 0.547885 2_3:-13240123 Msa0279390:CDS
TTCAAGTTGGTTATTGCTGG+TGG 0.548554 2_3:-13239913 Msa0279390:CDS
GTATTTGAAAGAGAGTGGCT+TGG 0.549260 2_3:-13242701 Msa0279390:CDS
TGAAACAGTAGGATCTTCTC+TGG 0.549299 2_3:-13242371 Msa0279390:CDS
TTGGGTGATGCCTTGTCAGG+TGG 0.549786 2_3:-13239973 Msa0279390:CDS
AGTTCTTTATAGATTAGGAC+TGG 0.553445 2_3:-13241591 Msa0279390:CDS
AAAGGATGCTAATGTTCAGA+TGG 0.554998 2_3:-13240154 Msa0279390:CDS
AGGTTCGTATACCGTCCAAT+GGG 0.555412 2_3:+13239730 None:intergenic
CGAGCCAATTTGAACAATCG+TGG 0.556311 2_3:-13239700 Msa0279390:CDS
ATTTCTAATGAAGAAAATCA+AGG 0.556458 2_3:-13241998 Msa0279390:CDS
GGTTCAGGATGTTGTGGGCA+TGG 0.557398 2_3:-13241345 Msa0279390:CDS
GATCATGATGTGGGTTATGA+AGG 0.557737 2_3:-13240252 Msa0279390:CDS
CGGAGAAATAAGGCAACTGC+TGG 0.558621 2_3:-13240012 Msa0279390:CDS
GCCGAGCAACTCGAATCAGC+AGG 0.560010 2_3:-13241500 Msa0279390:CDS
TGAAGGAGAAAAGGAGAGGG+GGG 0.561154 2_3:-13243415 Msa0279390:CDS
AGGCAAGGACATATCAGGCA+TGG 0.561552 2_3:+13240371 None:intergenic
GGATACAGATGACAAAGAAA+CGG 0.562233 2_3:-13242494 Msa0279390:CDS
ATCAAGGATGATTGTAGTGG+AGG 0.564329 2_3:-13242976 Msa0279390:CDS
TCACGGCTGGGATCATGATG+TGG 0.565086 2_3:-13240262 Msa0279390:CDS
GTGGATTATATCAGGGCCAA+TGG 0.565593 2_3:+13242519 None:intergenic
GGTACAGGGCATTAAAGTCC+GGG 0.566956 2_3:-13241324 Msa0279390:CDS
CTCCTCAACTGCGGAGCCTG+AGG 0.566977 2_3:-13241714 Msa0279390:CDS
TAAAACGTTTGACAGAGTGC+AGG 0.567701 2_3:+13241243 None:intergenic
TAATGAGATACCGACTGTCC+AGG 0.568358 2_3:-13242284 Msa0279390:CDS
TGCAGGATCTTCTCATTGTG+TGG 0.568708 2_3:+13241260 None:intergenic
ATCACCAGCTGCTTGACGAA+TGG 0.569319 2_3:+13240986 None:intergenic
TAATGAAGGAGAAAAGGAGA+GGG 0.570127 2_3:-13243418 Msa0279390:CDS
AAGATGACGATACCGGTGCG+TGG 0.570230 2_3:+13240326 None:intergenic
ATGAATCAAGATGACGATAC+CGG 0.571203 2_3:+13240319 None:intergenic
GATGTTGTGGGCATGGTACA+GGG 0.572321 2_3:-13241338 Msa0279390:CDS
GGACAGGTCGTACAAGCCAC+TGG 0.573934 2_3:+13240292 None:intergenic
TCAGTTATTGTGCGTAAGAG+AGG 0.574603 2_3:+13241146 None:intergenic
GAAACAATTGATGAAACAGT+AGG 0.575955 2_3:-13242382 Msa0279390:CDS
GGAAAATGGAAGCACGAACA+AGG 0.576504 2_3:-13242800 Msa0279390:CDS
GAAACCAGGGTGCTGAGGCT+GGG 0.576694 2_3:-13242723 Msa0279390:CDS
GGTATCAAGGATGATTGTAG+TGG 0.577582 2_3:-13242979 Msa0279390:CDS
TGATAATCAGGAGGAGTCTG+TGG 0.577797 2_3:-13243082 Msa0279390:CDS
GAGCAACTTAGAGGGAGGAA+TGG 0.578334 2_3:-13241566 Msa0279390:CDS
AAGTGAGGAGATTGAAAATG+AGG 0.579255 2_3:-13242866 Msa0279390:CDS
TGTTGGAGATGACAAGATAG+AGG 0.579924 2_3:-13242671 Msa0279390:CDS
CGTGATGATGTTGCTTATGG+TGG 0.580769 2_3:-13239877 Msa0279390:CDS
GAGCCAATTTGAACAATCGT+GGG 0.581635 2_3:-13239699 Msa0279390:CDS
ATTGTACAAGAGAAATCAAG+TGG 0.581699 2_3:+13241470 None:intergenic
AAGGTTCGTATACCGTCCAA+TGG 0.581801 2_3:+13239729 None:intergenic
GTTTCATCACCAGAATCTGA+TGG 0.584845 2_3:+13240645 None:intergenic
AATGAGTCGAAGAATTTGGA+AGG 0.586145 2_3:-13243357 Msa0279390:CDS
GTGAAATTCAAGATGATACA+GGG 0.586161 2_3:-13242618 Msa0279390:CDS
GAGGCATATCACTAAAATCC+CGG 0.587617 2_3:+13241165 None:intergenic
TTGTGCTACAACAACATTGT+GGG 0.588324 2_3:+13241613 None:intergenic
GATGACAAGAGAAACGGTAA+TGG 0.588740 2_3:+13240750 None:intergenic
AGTGGCTTGGATCCTGATGT+TGG 0.588972 2_3:-13242688 Msa0279390:CDS
AAAGCAGCGGAAGATGATGA+AGG 0.590226 2_3:-13240481 Msa0279390:CDS
ATGAAGGAGAAAAGGAGAGG+GGG 0.590571 2_3:-13243416 Msa0279390:CDS
TTAGCCGATTTAAACACTGA+TGG 0.591442 2_3:-13242943 Msa0279390:CDS
GCTACTGCAGCTGATTCAGA+AGG 0.592295 2_3:-13242046 Msa0279390:CDS
AGAATCGAAGGAAGCAGGCA+AGG 0.592639 2_3:+13240356 None:intergenic
GCAGACTGTTGGGAAAGACT+TGG 0.592875 2_3:-13240073 Msa0279390:CDS
GCCTAGACAAAATGGTGGCA+TGG 0.595463 2_3:-13242827 Msa0279390:CDS
GCTGGGTATTTGAAAGAGAG+TGG 0.596523 2_3:-13242706 Msa0279390:CDS
CGTGGGAGTATCAGAATCGA+AGG 0.600208 2_3:+13240344 None:intergenic
AGGCCAACAGGACGAACAAG+CGG 0.603613 2_3:+13241836 None:intergenic
TATCCTTGTGGATTATATCA+GGG 0.603810 2_3:+13242512 None:intergenic
GAATCGGTGAAAGATCTGCC+AGG 0.604130 2_3:-13240450 Msa0279390:CDS
GGCAAGGACATATCAGGCAT+GGG 0.604213 2_3:+13240372 None:intergenic
ATCTTGATTCATCCAACCAG+TGG 0.604636 2_3:-13240308 Msa0279390:CDS
TGTCCTAGAAACTCACGGCT+GGG 0.605203 2_3:-13240274 Msa0279390:CDS
GACAAGAGAAACGGTAATGG+TGG 0.607624 2_3:+13240753 None:intergenic
AGAAGGGATGACAAGAGAAA+CGG 0.610329 2_3:+13240744 None:intergenic
ATAAAGCACAATATCTGGAG+GGG 0.611134 2_3:+13241211 None:intergenic
CTGCAGCTGATTCAGAAGAA+GGG 0.611232 2_3:-13242258 Msa0279390:CDS
CACGGCTGGGATCATGATGT+GGG 0.612749 2_3:-13240261 Msa0279390:CDS
TCAAATTGGCTCGTGCAACA+AGG 0.613154 2_3:+13239710 None:intergenic
CAAAGCTAAAAGCGCCAACA+CGG 0.613162 2_3:+13241540 None:intergenic
ATTCTGATACTCCCACGCAC+CGG 0.613336 2_3:-13240338 Msa0279390:CDS
GTAATGGAGCAGCAGTTCCA+AGG 0.613696 2_3:+13241816 None:intergenic
AATGAAGGAGAAAAGGAGAG+GGG 0.614369 2_3:-13243417 Msa0279390:CDS
GATAAAGCACAATATCTGGA+GGG 0.614535 2_3:+13241210 None:intergenic
GCTGCAGTAGCCTGGACAGT+CGG 0.614540 2_3:+13242274 None:intergenic
AATGAGAAACCAGGGTGCTG+AGG 0.614665 2_3:-13242728 Msa0279390:CDS
TCTTATGAATCCTGTATCGT+TGG 0.615177 2_3:-13240958 Msa0279390:CDS
CCTCTCAGATCACTAAAGAA+CGG 0.615346 2_3:-13241907 Msa0279390:CDS
GTCCTGGTGTATCAATGACC+CGG 0.616327 2_3:+13241306 None:intergenic
CAACTTAGAGGGAGGAATGG+GGG 0.616857 2_3:-13241563 Msa0279390:CDS
TTTGTCAAAGGTTTAAATGG+GGG 0.616901 2_3:+13240606 None:intergenic
TGGAAGCACGGTGTTTCAGG+AGG 0.618747 2_3:-13242923 Msa0279390:CDS
GTTCGGTTAAATATGGAGAA+GGG 0.620993 2_3:-13240122 Msa0279390:CDS
AGATGACGATACCGGTGCGT+GGG 0.621681 2_3:+13240327 None:intergenic
TTGATAATGAGCGTCCTAGA+GGG 0.622612 2_3:+13239821 None:intergenic
CCGTTCTTTAGTGATCTGAG+AGG 0.624237 2_3:+13241907 None:intergenic
CGACCTGTCCTAGAAACTCA+CGG 0.624734 2_3:-13240279 Msa0279390:CDS
TGATTTGTGATGGATAATGA+AGG 0.625119 2_3:-13243432 None:intergenic
GAAGTGGAGGATGAGACCAT+TGG 0.626104 2_3:-13242535 Msa0279390:CDS
GCAACTTAGAGGGAGGAATG+GGG 0.626304 2_3:-13241564 Msa0279390:CDS
TTGCTGGTGGTGCAATGACA+GGG 0.626445 2_3:-13239900 Msa0279390:CDS
ATTTCATCAACCGAATCTGA+AGG 0.627557 2_3:+13243201 None:intergenic
TGAAGTGATTGATAATCAGG+AGG 0.628119 2_3:-13243091 Msa0279390:CDS
AGATAAAGCACAATATCTGG+AGG 0.628479 2_3:+13241209 None:intergenic
GCCAACAGGACGAACAAGCG+GGG 0.631363 2_3:+13241838 None:intergenic
CTTTGTCAAAGGTTTAAATG+GGG 0.633168 2_3:+13240605 None:intergenic
CTTGTGCTACAACAACATTG+TGG 0.633330 2_3:+13241612 None:intergenic
GTAACTTGTGAGGAATCGTA+TGG 0.633442 2_3:-13243000 Msa0279390:CDS
AGGAAAGTGACTGAAACTGT+CGG 0.633446 2_3:-13242121 Msa0279390:CDS
GACTGGCTGAGCAACTTAGA+GGG 0.634591 2_3:-13241574 Msa0279390:CDS
AATACCCAGCCTCAGCACCC+TGG 0.634888 2_3:+13242719 None:intergenic
ACTTGACCACTAAAAGACAC+TGG 0.637581 2_3:+13240189 None:intergenic
GTCCGGGTCATTGATACACC+AGG 0.638215 2_3:-13241308 Msa0279390:CDS
AGGTCGTACAAGCCACTGGT+TGG 0.638842 2_3:+13240296 None:intergenic
GCAACATCAACCAAATCCGA+AGG 0.639342 2_3:+13243243 None:intergenic
GAAAATGTGGAGGAAGAAAG+TGG 0.641728 2_3:-13240417 Msa0279390:CDS
GGAAGCACGGTGTTTCAGGA+GGG 0.642613 2_3:-13242922 Msa0279390:CDS
AATGGAAGCACGAACAAGGT+GGG 0.649339 2_3:-13242796 Msa0279390:CDS
TTGCGGCCTTGACTGCAGAA+GGG 0.649522 2_3:+13240728 None:intergenic
AAACTCAGGTTTGTCAAGTG+AGG 0.652028 2_3:-13242881 Msa0279390:CDS
ACAAACATGTCATAACTGGA+AGG 0.653148 2_3:+13241038 None:intergenic
ATAATGAAGGAGAAAAGGAG+AGG 0.656200 2_3:-13243419 Msa0279390:CDS
AGGTGACTATGGAGAAAATG+TGG 0.656527 2_3:-13240430 Msa0279390:CDS
TTTAAACACTGATGGAAGCA+CGG 0.657586 2_3:-13242935 Msa0279390:CDS
GGTACTGAAGAGACTGAGGA+CGG 0.659660 2_3:-13243024 Msa0279390:CDS
GTTGATAATGAGCGTCCTAG+AGG 0.660527 2_3:+13239820 None:intergenic
CTACTGCAGCTGATTCAGAA+GGG 0.660579 2_3:-13242045 Msa0279390:CDS
TACAGAATTTGGATCCGATG+AGG 0.666081 2_3:-13242752 Msa0279390:CDS
GTTTGTGGAACGTCTGAACG+AGG 0.670740 2_3:-13243121 Msa0279390:CDS
TATCAATTCTATCTTTGACG+AGG 0.673568 2_3:-13241408 Msa0279390:CDS
TGTGGCTGGTCTGACCAAGA+AGG 0.674043 2_3:+13241278 None:intergenic
AGATGGTACTGAAGAGACTG+AGG 0.675363 2_3:-13243028 Msa0279390:CDS
AGTGAAGCGATTGAAACAGG+AGG 0.679435 2_3:-13242166 Msa0279390:CDS
GTACCATTAGGGCCATCAGG+TGG 0.679621 2_3:+13241062 None:intergenic
GCCGCAATTAAAATTGCCAG+AGG 0.680748 2_3:-13240712 Msa0279390:CDS
TGGCTGAGCAACTTAGAGGG+AGG 0.681391 2_3:-13241571 Msa0279390:CDS
AGCCAATTTGAACAATCGTG+GGG 0.683448 2_3:-13239698 Msa0279390:CDS
TTGTAATGATGAAACCGAGG+AGG 0.684954 2_3:-13242434 Msa0279390:CDS
GATGAGGAAATGAGAAACCA+GGG 0.685078 2_3:-13242736 Msa0279390:CDS
TGGCCCTGATATAATCCACA+AGG 0.686452 2_3:-13242515 Msa0279390:CDS
AAATGGAAGCACGAACAAGG+TGG 0.686726 2_3:-13242797 Msa0279390:CDS
TGATTCAGAAGGGAGTACAA+AGG 0.687990 2_3:-13242035 Msa0279390:CDS
TGATAGGGAAGAGATACCAG+AGG 0.688438 2_3:+13242321 None:intergenic
AGGCATGGGAACAGGAACAG+AGG 0.691015 2_3:+13240386 None:intergenic
AAAGATAAGAGTAACAGCTG+AGG 0.692896 2_3:+13240864 None:intergenic
TGAAATTCAAGATGATACAG+GGG 0.693349 2_3:-13242617 Msa0279390:CDS
TGAGGACGGAGTAACTTGTG+AGG 0.695232 2_3:-13243010 Msa0279390:CDS
AATGGAAGACTCCTCAACTG+CGG 0.695801 2_3:-13241723 Msa0279390:CDS
TGACTATGGAGAAAATGTGG+AGG 0.705796 2_3:-13240427 Msa0279390:CDS
TATTAGTTCTACATGCAGAG+TGG 0.709756 2_3:+13240928 None:intergenic
GTGACGCCTAGACAAAATGG+TGG 0.711364 2_3:-13242832 Msa0279390:CDS
TTATTGTAATGATGAAACCG+AGG 0.715588 2_3:-13242437 Msa0279390:CDS
ATAGCATTGAACCATATGGG+TGG 0.718990 2_3:+13241113 None:intergenic
TTCAGAAGAAGGGAGTACGG+AGG 0.722118 2_3:-13242248 Msa0279390:CDS
GATACAGTATAATTGACCCG+TGG 0.724591 2_3:+13241764 None:intergenic
GAAGAAAGCATATCTAGACG+AGG 0.730624 2_3:-13240553 Msa0279390:CDS
AGAGGAGCAATTCAGCGACG+AGG 0.731632 2_3:-13240694 Msa0279390:CDS
TGTGCTACAACAACATTGTG+GGG 0.734919 2_3:+13241614 None:intergenic
TGTGGAACGTCTGAACGAGG+AGG 0.736329 2_3:-13243118 Msa0279390:CDS
AATGTGGAGGAAGAAAGTGG+TGG 0.798455 2_3:-13240414 Msa0279390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATTATCAAAATGCTTTAA+CGG + chr2_3:13239693-13239712 None:intergenic 20.0%
!!! TTAAAGCATTTTGATAATCT+GGG - chr2_3:13239693-13239712 Msa0279390:CDS 20.0%
!! ATTTCTAATGAAGAAAATCA+AGG - chr2_3:13240785-13240804 Msa0279390:CDS 20.0%
!!! AGACAAAATTTTGTAACTTT+CGG - chr2_3:13242964-13242983 Msa0279390:CDS 20.0%
!!! TATTTTAAACAATTGCAGTT+TGG - chr2_3:13243410-13243429 Msa0279390:CDS 20.0%
! GATTATCAAAATGCTTTAAC+GGG + chr2_3:13239692-13239711 None:intergenic 25.0%
!!! GTTAAAGCATTTTGATAATC+TGG - chr2_3:13239692-13239711 Msa0279390:CDS 25.0%
!!! ATTGGATAATTTTCAAGAGT+CGG - chr2_3:13239836-13239855 Msa0279390:CDS 25.0%
!! TAGAAAAAGAGTTTTCTGAT+GGG + chr2_3:13240910-13240929 None:intergenic 25.0%
!! TTAGAAAAAGAGTTTTCTGA+TGG + chr2_3:13240911-13240930 None:intergenic 25.0%
! AGAGAAACTTCAAATGATTA+GGG - chr2_3:13241321-13241340 Msa0279390:CDS 25.0%
! TGATTTCTCTTGTACAATAA+TGG - chr2_3:13241531-13241550 Msa0279390:CDS 25.0%
! TGACGAGGTTAAATTTAATA+CGG - chr2_3:13241603-13241622 Msa0279390:CDS 25.0%
!! ACTTTAATTGTTTCTTCATG+AGG + chr2_3:13242488-13242507 None:intergenic 25.0%
! TAAAGTATGAAAAAAAGCAG+CGG - chr2_3:13242502-13242521 Msa0279390:CDS 25.0%
!! GTAATTTTTATCTCTCAACT+GGG + chr2_3:13243156-13243175 None:intergenic 25.0%
ATCTAATGAGTCGAAGAATT+TGG - chr2_3:13239635-13239654 Msa0279390:CDS 30.0%
! AGATGAAGTGATTGATAATC+AGG - chr2_3:13239902-13239921 Msa0279390:CDS 30.0%
TCATCTTGAATTTCACTAGA+AGG + chr2_3:13240374-13240393 None:intergenic 30.0%
AGTGAAATTCAAGATGATAC+AGG - chr2_3:13240377-13240396 Msa0279390:CDS 30.0%
GTGAAATTCAAGATGATACA+GGG - chr2_3:13240378-13240397 Msa0279390:CDS 30.0%
TGAAATTCAAGATGATACAG+GGG - chr2_3:13240379-13240398 Msa0279390:CDS 30.0%
TCAGGAAAAATTTACAGAAG+TGG - chr2_3:13240445-13240464 Msa0279390:CDS 30.0%
! TATCCTTGTGGATTATATCA+GGG + chr2_3:13240487-13240506 None:intergenic 30.0%
TTATTGTAATGATGAAACCG+AGG - chr2_3:13240559-13240578 Msa0279390:CDS 30.0%
GAAACAATTGATGAAACAGT+AGG - chr2_3:13240614-13240633 Msa0279390:CDS 30.0%
!! AATCACTTTTCTTTCATCCA+CGG + chr2_3:13240651-13240670 None:intergenic 30.0%
AGCAAAAGAACTTTCTGATA+GGG + chr2_3:13240693-13240712 None:intergenic 30.0%
TAGCAAAAGAACTTTCTGAT+AGG + chr2_3:13240694-13240713 None:intergenic 30.0%
CATGAAAACTTATCTGTTGT+TGG - chr2_3:13240803-13240822 Msa0279390:CDS 30.0%
TAATGAAAAATCGTCTGTTG+TGG - chr2_3:13241024-13241043 Msa0279390:CDS 30.0%
! TTATTCTCAGGTATCTTTTC+AGG + chr2_3:13241052-13241071 None:intergenic 30.0%
TTCTCTTTCATGTTATTCTC+AGG + chr2_3:13241064-13241083 None:intergenic 30.0%
GAGAGAAACTTCAAATGATT+AGG - chr2_3:13241320-13241339 Msa0279390:CDS 30.0%
GCACAAGTTCTTTATAGATT+AGG - chr2_3:13241400-13241419 Msa0279390:CDS 30.0%
AGTTCTTTATAGATTAGGAC+TGG - chr2_3:13241405-13241424 Msa0279390:CDS 30.0%
ATTGTACAAGAGAAATCAAG+TGG + chr2_3:13241529-13241548 None:intergenic 30.0%
TCTTGTACAATAATGGTTCT+TGG - chr2_3:13241538-13241557 Msa0279390:CDS 30.0%
TATCAATTCTATCTTTGACG+AGG - chr2_3:13241588-13241607 Msa0279390:CDS 30.0%
! TAATACGGATGCTTTTCATA+CGG - chr2_3:13241618-13241637 Msa0279390:CDS 30.0%
TCTAGATAAAGCACAATATC+TGG + chr2_3:13241793-13241812 None:intergenic 30.0%
! ACAATAGCATTGAACCATAT+GGG + chr2_3:13241889-13241908 None:intergenic 30.0%
TGTAACAAACATGTCATAAC+TGG + chr2_3:13241965-13241984 None:intergenic 30.0%
! ATCTTTTGCGTCAAAAATTC+TGG - chr2_3:13242149-13242168 Msa0279390:CDS 30.0%
TTTGTCAAAGGTTTAAATGG+GGG + chr2_3:13242393-13242412 None:intergenic 30.0%
CTTTGTCAAAGGTTTAAATG+GGG + chr2_3:13242394-13242413 None:intergenic 30.0%
CCTTTGTCAAAGGTTTAAAT+GGG + chr2_3:13242395-13242414 None:intergenic 30.0%
TCAAGTTACCAAGGATAAAA+AGG - chr2_3:13242824-13242843 Msa0279390:CDS 30.0%
! ATTAGCATCCTTTTTATCCT+TGG + chr2_3:13242835-13242854 None:intergenic 30.0%
ATGACAAGTTCGGTTAAATA+TGG - chr2_3:13242867-13242886 Msa0279390:CDS 30.0%
TTGTAACTTTCGGAGAAATA+AGG - chr2_3:13242974-13242993 Msa0279390:CDS 30.0%
! GGTAATTTTTATCTCTCAAC+TGG + chr2_3:13243157-13243176 None:intergenic 30.0%
AGAGATAAAAATTACCCTCT+AGG - chr2_3:13243161-13243180 Msa0279390:CDS 30.0%
TTACAATCACAAATTCCCAT+TGG - chr2_3:13243251-13243270 Msa0279390:CDS 30.0%
CAATAACCTTCTTAAGTAGA+GGG + chr2_3:13243388-13243407 None:intergenic 30.0%
ATAATGAAGGAGAAAAGGAG+AGG - chr2_3:13239577-13239596 Msa0279390:CDS 35.0%
TAATGAAGGAGAAAAGGAGA+GGG - chr2_3:13239578-13239597 Msa0279390:CDS 35.0%
AATGAGTCGAAGAATTTGGA+AGG - chr2_3:13239639-13239658 Msa0279390:CDS 35.0%
TAGTTCATTGCCTTCAGATT+CGG - chr2_3:13239785-13239804 Msa0279390:CDS 35.0%
ATTTCATCAACCGAATCTGA+AGG + chr2_3:13239798-13239817 None:intergenic 35.0%
!! TCAGATTCGGTTGATGAAAT+TGG - chr2_3:13239798-13239817 Msa0279390:CDS 35.0%
! TGGTGATAACGTAGAAGAAT+TGG - chr2_3:13239818-13239837 Msa0279390:CDS 35.0%
!! GATAATTTTCAAGAGTCGGT+GGG - chr2_3:13239840-13239859 Msa0279390:CDS 35.0%
!! ATAATTTTCAAGAGTCGGTG+GGG - chr2_3:13239841-13239860 Msa0279390:CDS 35.0%
! TGAAGTGATTGATAATCAGG+AGG - chr2_3:13239905-13239924 Msa0279390:CDS 35.0%
! TTAGCCGATTTAAACACTGA+TGG - chr2_3:13240053-13240072 Msa0279390:CDS 35.0%
GCTTCCATCAGTGTTTAAAT+CGG + chr2_3:13240060-13240079 None:intergenic 35.0%
TTTAAACACTGATGGAAGCA+CGG - chr2_3:13240061-13240080 Msa0279390:CDS 35.0%
AAGTGAGGAGATTGAAAATG+AGG - chr2_3:13240130-13240149 Msa0279390:CDS 35.0%
GATGAGTTGCATACAGAATT+TGG - chr2_3:13240233-13240252 Msa0279390:CDS 35.0%
! TCTGTAAATTTTTCCTGACG+AGG + chr2_3:13240443-13240462 None:intergenic 35.0%
GGAAAAATTTACAGAAGTGG+AGG - chr2_3:13240448-13240467 Msa0279390:CDS 35.0%
! GTATCCTTGTGGATTATATC+AGG + chr2_3:13240488-13240507 None:intergenic 35.0%
GGATACAGATGACAAAGAAA+CGG - chr2_3:13240502-13240521 Msa0279390:CDS 35.0%
! CAGATGCTCTGAATTTGATA+CGG + chr2_3:13240594-13240613 None:intergenic 35.0%
AGAAAAGTGATTGAAACCTC+TGG - chr2_3:13240659-13240678 Msa0279390:CDS 35.0%
CTTCATTAGAAATCTCAGAC+TGG + chr2_3:13240778-13240797 None:intergenic 35.0%
TAATGAGATGACATCTGTTC+AGG - chr2_3:13240928-13240947 Msa0279390:CDS 35.0%
! CTTCATTAGAAATCTGAGAC+AGG + chr2_3:13240991-13241010 None:intergenic 35.0%
TAATACACAGTCCCAGAAAA+TGG - chr2_3:13241255-13241274 Msa0279390:CDS 35.0%
! TGATTAGGGTGAAGTTTTTG+CGG - chr2_3:13241335-13241354 Msa0279390:CDS 35.0%
TTGTGCTACAACAACATTGT+GGG + chr2_3:13241386-13241405 None:intergenic 35.0%
ATAATGGTTCTTGGAAAGTC+AGG - chr2_3:13241547-13241566 Msa0279390:CDS 35.0%
! AATACGGATGCTTTTCATAC+GGG - chr2_3:13241619-13241638 Msa0279390:CDS 35.0%
! TTTTCATACGGGAACGAAAA+AGG - chr2_3:13241630-13241649 Msa0279390:CDS 35.0%
AAAAAGGTTCAGGATGTTGT+GGG - chr2_3:13241646-13241665 Msa0279390:CDS 35.0%
ATAAAGCACAATATCTGGAG+GGG + chr2_3:13241788-13241807 None:intergenic 35.0%
GATAAAGCACAATATCTGGA+GGG + chr2_3:13241789-13241808 None:intergenic 35.0%
AGATAAAGCACAATATCTGG+AGG + chr2_3:13241790-13241809 None:intergenic 35.0%
ATAGATTAGATATGCAGAGC+CGG - chr2_3:13241812-13241831 Msa0279390:CDS 35.0%
! CGCACAATAACTGACATTTT+TGG - chr2_3:13241859-13241878 Msa0279390:CDS 35.0%
! CACAATAGCATTGAACCATA+TGG + chr2_3:13241890-13241909 None:intergenic 35.0%
CATATGGTTCAATGCTATTG+TGG - chr2_3:13241888-13241907 Msa0279390:CDS 35.0%
ACAAACATGTCATAACTGGA+AGG + chr2_3:13241961-13241980 None:intergenic 35.0%
TCTTATGAATCCTGTATCGT+TGG - chr2_3:13242038-13242057 Msa0279390:CDS 35.0%
!! TATTAGTTCTACATGCAGAG+TGG + chr2_3:13242071-13242090 None:intergenic 35.0%
CTCTGCATGTAGAACTAATA+CGG - chr2_3:13242071-13242090 Msa0279390:CDS 35.0%
AAAGATAAGAGTAACAGCTG+AGG + chr2_3:13242135-13242154 None:intergenic 35.0%
!!! TCCTCTGGCAATTTTAATTG+CGG + chr2_3:13242288-13242307 None:intergenic 35.0%
CCCATTTAAACCTTTGACAA+AGG - chr2_3:13242392-13242411 Msa0279390:CDS 35.0%
GCCTTTGTCAAAGGTTTAAA+TGG + chr2_3:13242396-13242415 None:intergenic 35.0%
TCTAGAAAGGTTTCTGATCT+GGG + chr2_3:13242418-13242437 None:intergenic 35.0%
! TCTTCATGAGGAGTTTTTCT+CGG + chr2_3:13242476-13242495 None:intergenic 35.0%
ATGAATCAAGATGACGATAC+CGG + chr2_3:13242680-13242699 None:intergenic 35.0%
! AAGATACCAGTGTCTTTTAG+TGG - chr2_3:13242801-13242820 Msa0279390:CDS 35.0%
! TTTTAGTGGTCAAGTTACCA+AGG - chr2_3:13242815-13242834 Msa0279390:CDS 35.0%
AAAGGATGCTAATGTTCAGA+TGG - chr2_3:13242842-13242861 Msa0279390:CDS 35.0%
TCAGATGGAAATGACAAGTT+CGG - chr2_3:13242857-13242876 Msa0279390:CDS 35.0%
AGTTCGGTTAAATATGGAGA+AGG - chr2_3:13242873-13242892 Msa0279390:CDS 35.0%
GTTCGGTTAAATATGGAGAA+GGG - chr2_3:13242874-13242893 Msa0279390:CDS 35.0%
TGCTAATAAGCGATTCAAGT+TGG - chr2_3:13243070-13243089 Msa0279390:CDS 35.0%
AATCACAAATTCCCATTGGA+CGG - chr2_3:13243255-13243274 Msa0279390:CDS 35.0%
CAGCTTCAAATTGCTTTGAT+TGG - chr2_3:13243356-13243375 Msa0279390:CDS 35.0%
CCAATAACCTTCTTAAGTAG+AGG + chr2_3:13243389-13243408 None:intergenic 35.0%
CCTCTACTTAAGAAGGTTAT+TGG - chr2_3:13243386-13243405 Msa0279390:CDS 35.0%
AATGAAGGAGAAAAGGAGAG+GGG - chr2_3:13239579-13239598 Msa0279390:CDS 40.0%
GAAGAATTTGGAAGGAGATG+AGG - chr2_3:13239647-13239666 Msa0279390:CDS 40.0%
TGCTGTTAGTTCATTGCCTT+CGG - chr2_3:13239737-13239756 Msa0279390:CDS 40.0%
TAGTTCATTGCCTTCGGATT+TGG - chr2_3:13239743-13239762 Msa0279390:CDS 40.0%
!! GGATAATTTTCAAGAGTCGG+TGG - chr2_3:13239839-13239858 Msa0279390:CDS 40.0%
!! TAATTTTCAAGAGTCGGTGG+GGG - chr2_3:13239842-13239861 Msa0279390:CDS 40.0%
! CTTTACAGCGCTTTTCTAGA+TGG - chr2_3:13239951-13239970 Msa0279390:CDS 40.0%
! GTAACTTGTGAGGAATCGTA+TGG - chr2_3:13239996-13240015 Msa0279390:CDS 40.0%
TGAGGAATCGTATGGTATCA+AGG - chr2_3:13240004-13240023 Msa0279390:CDS 40.0%
GGTATCAAGGATGATTGTAG+TGG - chr2_3:13240017-13240036 Msa0279390:CDS 40.0%
ATCAAGGATGATTGTAGTGG+AGG - chr2_3:13240020-13240039 Msa0279390:CDS 40.0%
AAACTCAGGTTTGTCAAGTG+AGG - chr2_3:13240115-13240134 Msa0279390:CDS 40.0%
TTTGTGACGCCTAGACAAAA+TGG - chr2_3:13240161-13240180 Msa0279390:CDS 40.0%
! ACAAAATGGTGGCATGGTTT+TGG - chr2_3:13240175-13240194 Msa0279390:CDS 40.0%
TACAGAATTTGGATCCGATG+AGG - chr2_3:13240244-13240263 Msa0279390:CDS 40.0%
CTGGTTTCTCATTTCCTCAT+CGG + chr2_3:13240261-13240280 None:intergenic 40.0%
GATGAGGAAATGAGAAACCA+GGG - chr2_3:13240260-13240279 Msa0279390:CDS 40.0%
GTATTTGAAAGAGAGTGGCT+TGG - chr2_3:13240295-13240314 Msa0279390:CDS 40.0%
ATCTTGTCATCTCCAACATC+AGG + chr2_3:13240323-13240342 None:intergenic 40.0%
TGTTGGAGATGACAAGATAG+AGG - chr2_3:13240325-13240344 Msa0279390:CDS 40.0%
! TGAGTATTTAGAACCTCGTC+AGG - chr2_3:13240427-13240446 Msa0279390:CDS 40.0%
CTTTGTCATCTGTATCCTTG+TGG + chr2_3:13240499-13240518 None:intergenic 40.0%
TTGTAATGATGAAACCGAGG+AGG - chr2_3:13240562-13240581 Msa0279390:CDS 40.0%
! CGTATCAAATTCAGAGCATC+TGG - chr2_3:13240592-13240611 Msa0279390:CDS 40.0%
TGAAACAGTAGGATCTTCTC+TGG - chr2_3:13240625-13240644 Msa0279390:CDS 40.0%
TGATTCAGAAGAAGGGAGTA+CGG - chr2_3:13240745-13240764 Msa0279390:CDS 40.0%
AGAAGTGAAGCGATTGAAAC+AGG - chr2_3:13240827-13240846 Msa0279390:CDS 40.0%
ACTTTCCTTTCATCCAAAGC+CGG + chr2_3:13240863-13240882 None:intergenic 40.0%
AGGAAAGTGACTGAAACTGT+CGG - chr2_3:13240875-13240894 Msa0279390:CDS 40.0%
! TGATTCAGAAGGGAGTACAA+AGG - chr2_3:13240961-13240980 Msa0279390:CDS 40.0%
CCTCTCAGATCACTAAAGAA+CGG - chr2_3:13241089-13241108 Msa0279390:CDS 40.0%
! AGCAACAGATTTTCCAGATG+AGG + chr2_3:13241131-13241150 None:intergenic 40.0%
GATACAGTATAATTGACCCG+TGG + chr2_3:13241235-13241254 None:intergenic 40.0%
! TGAGGAGTCTTCCATTTTCT+GGG + chr2_3:13241269-13241288 None:intergenic 40.0%
! TTGAGGAGTCTTCCATTTTC+TGG + chr2_3:13241270-13241289 None:intergenic 40.0%
TGTGCTACAACAACATTGTG+GGG + chr2_3:13241385-13241404 None:intergenic 40.0%
CTTGTGCTACAACAACATTG+TGG + chr2_3:13241387-13241406 None:intergenic 40.0%
GAAAAAGGTTCAGGATGTTG+TGG - chr2_3:13241645-13241664 Msa0279390:CDS 40.0%
TAAAACGTTTGACAGAGTGC+AGG + chr2_3:13241756-13241775 None:intergenic 40.0%
TAGATTAGATATGCAGAGCC+GGG - chr2_3:13241813-13241832 Msa0279390:CDS 40.0%
GAGGCATATCACTAAAATCC+CGG + chr2_3:13241834-13241853 None:intergenic 40.0%
TCAGTTATTGTGCGTAAGAG+AGG + chr2_3:13241853-13241872 None:intergenic 40.0%
!! ACATTTTTGGACCACCCATA+TGG - chr2_3:13241872-13241891 Msa0279390:CDS 40.0%
! ATAGCATTGAACCATATGGG+TGG + chr2_3:13241886-13241905 None:intergenic 40.0%
!! AACTGGAAGGAGTACCATTA+GGG + chr2_3:13241948-13241967 None:intergenic 40.0%
!! TAACTGGAAGGAGTACCATT+AGG + chr2_3:13241949-13241968 None:intergenic 40.0%
TATGAATCCTGTATCGTTGG+TGG - chr2_3:13242041-13242060 Msa0279390:CDS 40.0%
!! GACAAAGAGTGTTGCCTAAT+GGG - chr2_3:13242097-13242116 Msa0279390:CDS 40.0%
GATGACAAGAGAAACGGTAA+TGG + chr2_3:13242249-13242268 None:intergenic 40.0%
AGAAGGGATGACAAGAGAAA+CGG + chr2_3:13242255-13242274 None:intergenic 40.0%
CTTGATGAACCATCAGATTC+TGG - chr2_3:13242342-13242361 Msa0279390:CDS 40.0%
GTTTCATCACCAGAATCTGA+TGG + chr2_3:13242354-13242373 None:intergenic 40.0%
TAAATGGGGGTAAGTCATCA+GGG + chr2_3:13242380-13242399 None:intergenic 40.0%
TTAAATGGGGGTAAGTCATC+AGG + chr2_3:13242381-13242400 None:intergenic 40.0%
! CTCTAGAAAGGTTTCTGATC+TGG + chr2_3:13242419-13242438 None:intergenic 40.0%
!! CTTTCTTCTGAGCTCTAGAA+AGG + chr2_3:13242431-13242450 None:intergenic 40.0%
! GAAGAAAGCATATCTAGACG+AGG - chr2_3:13242443-13242462 Msa0279390:CDS 40.0%
GATGAAGGAAATGGCAGAAT+CGG - chr2_3:13242530-13242549 Msa0279390:CDS 40.0%
! ACATTTTCTCCATAGTCACC+TGG + chr2_3:13242567-13242586 None:intergenic 40.0%
AGGTGACTATGGAGAAAATG+TGG - chr2_3:13242566-13242585 Msa0279390:CDS 40.0%
TGACTATGGAGAAAATGTGG+AGG - chr2_3:13242569-13242588 Msa0279390:CDS 40.0%
GAAAATGTGGAGGAAGAAAG+TGG - chr2_3:13242579-13242598 Msa0279390:CDS 40.0%
ATCTTGATTCATCCAACCAG+TGG - chr2_3:13242688-13242707 Msa0279390:CDS 40.0%
! GATCATGATGTGGGTTATGA+AGG - chr2_3:13242744-13242763 Msa0279390:CDS 40.0%
ACTTGACCACTAAAAGACAC+TGG + chr2_3:13242810-13242829 None:intergenic 40.0%
!! GTTTTGACATGCAGACTGTT+GGG - chr2_3:13242913-13242932 Msa0279390:CDS 40.0%
TGGTCTCTCATTTACTCTCT+TGG - chr2_3:13243004-13243023 Msa0279390:CDS 40.0%
GGTCTCTCATTTACTCTCTT+GGG - chr2_3:13243005-13243024 Msa0279390:CDS 40.0%
!!! GATTTTAACTCCACCTGACA+AGG + chr2_3:13243036-13243055 None:intergenic 40.0%
!! CGATTCAAGTTGGTTATTGC+TGG - chr2_3:13243080-13243099 Msa0279390:CDS 40.0%
!! TTCAAGTTGGTTATTGCTGG+TGG - chr2_3:13243083-13243102 Msa0279390:CDS 40.0%
!! TTGATAATGAGCGTCCTAGA+GGG + chr2_3:13243178-13243197 None:intergenic 40.0%
TTGGGCTTTCTGTTATGGAT+TGG - chr2_3:13243201-13243220 Msa0279390:CDS 40.0%
!! CTTTCTGTTATGGATTGGCA+TGG - chr2_3:13243206-13243225 Msa0279390:CDS 40.0%
GAGCCAATTTGAACAATCGT+GGG - chr2_3:13243297-13243316 Msa0279390:CDS 40.0%
AGCCAATTTGAACAATCGTG+GGG - chr2_3:13243298-13243317 Msa0279390:CDS 40.0%
CCTTCTTAAGTAGAGGGATT+AGG + chr2_3:13243382-13243401 None:intergenic 40.0%
CCTAATCCCTCTACTTAAGA+AGG - chr2_3:13243379-13243398 Msa0279390:CDS 40.0%
ATGAAGGAGAAAAGGAGAGG+GGG - chr2_3:13239580-13239599 Msa0279390:CDS 45.0%
! GGTGATGATGTTGATGTTGC+TGG - chr2_3:13239714-13239733 Msa0279390:CDS 45.0%
GCAACATCAACCAAATCCGA+AGG + chr2_3:13239756-13239775 None:intergenic 45.0%
TGATAATCAGGAGGAGTCTG+TGG - chr2_3:13239914-13239933 Msa0279390:CDS 45.0%
! AGATGGTACTGAAGAGACTG+AGG - chr2_3:13239968-13239987 Msa0279390:CDS 45.0%
! GGATGATTGTAGTGGAGGAA+AGG - chr2_3:13240025-13240044 Msa0279390:CDS 45.0%
! TGATTGTAGTGGAGGAAAGG+AGG - chr2_3:13240028-13240047 Msa0279390:CDS 45.0%
!! GACTTGGTGAATGGAAACTC+AGG - chr2_3:13240101-13240120 Msa0279390:CDS 45.0%
! ACCATGCCACCATTTTGTCT+AGG + chr2_3:13240173-13240192 None:intergenic 45.0%
!!! GGTGGCATGGTTTTGGAAAA+TGG - chr2_3:13240182-13240201 Msa0279390:CDS 45.0%
! GGAAAATGGAAGCACGAACA+AGG - chr2_3:13240196-13240215 Msa0279390:CDS 45.0%
! AAATGGAAGCACGAACAAGG+TGG - chr2_3:13240199-13240218 Msa0279390:CDS 45.0%
! AATGGAAGCACGAACAAGGT+GGG - chr2_3:13240200-13240219 Msa0279390:CDS 45.0%
CGATGAGGAAATGAGAAACC+AGG - chr2_3:13240259-13240278 Msa0279390:CDS 45.0%
GCTGGGTATTTGAAAGAGAG+TGG - chr2_3:13240290-13240309 Msa0279390:CDS 45.0%
GAGGAACAGTTCAATGCTTC+AGG - chr2_3:13240344-13240363 Msa0279390:CDS 45.0%
! GTGGATTATATCAGGGCCAA+TGG + chr2_3:13240480-13240499 None:intergenic 45.0%
TGGCCCTGATATAATCCACA+AGG - chr2_3:13240481-13240500 Msa0279390:CDS 45.0%
TGATAGGGAAGAGATACCAG+AGG + chr2_3:13240678-13240697 None:intergenic 45.0%
! TAATGAGATACCGACTGTCC+AGG - chr2_3:13240712-13240731 Msa0279390:CDS 45.0%
! ACTGCAGCTGATTCAGAAGA+AGG - chr2_3:13240737-13240756 Msa0279390:CDS 45.0%
! CTGCAGCTGATTCAGAAGAA+GGG - chr2_3:13240738-13240757 Msa0279390:CDS 45.0%
AGTGAAGCGATTGAAACAGG+AGG - chr2_3:13240830-13240849 Msa0279390:CDS 45.0%
TGAAACAGGAGGATCTTCTC+CGG - chr2_3:13240841-13240860 Msa0279390:CDS 45.0%
! CTACTGCAGCTGATTCAGAA+GGG - chr2_3:13240735-13240754 Msa0279390:CDS 45.0%
CCGTTCTTTAGTGATCTGAG+AGG + chr2_3:13241092-13241111 None:intergenic 45.0%
AGTGAGCTTGATTCCTCATC+TGG - chr2_3:13241115-13241134 Msa0279390:CDS 45.0%
ATTACTGGAACCTGCTCCTA+GGG - chr2_3:13241198-13241217 Msa0279390:CDS 45.0%
AATGGAAGACTCCTCAACTG+CGG - chr2_3:13241273-13241292 Msa0279390:CDS 45.0%
!! AGTTTTTGCGGCTGGCTAAT+AGG - chr2_3:13241347-13241366 Msa0279390:CDS 45.0%
AGCAACTTAGAGGGAGGAAT+GGG - chr2_3:13241431-13241450 Msa0279390:CDS 45.0%
!! CAAAGCTAAAAGCGCCAACA+CGG + chr2_3:13241459-13241478 None:intergenic 45.0%
GTTCTTGGAAAGTCAGGAGT+TGG - chr2_3:13241553-13241572 Msa0279390:CDS 45.0%
TACGGGAACGAAAAAGGTTC+AGG - chr2_3:13241636-13241655 Msa0279390:CDS 45.0%
! TGGTACAGGGCATTAAAGTC+CGG - chr2_3:13241671-13241690 Msa0279390:CDS 45.0%
TGCAGGATCTTCTCATTGTG+TGG + chr2_3:13241739-13241758 None:intergenic 45.0%
!!! GGTTTTGACTCATGCAGCAT+CGG - chr2_3:13241909-13241928 Msa0279390:CDS 45.0%
GCATGTAGAACTAATACGGC+TGG - chr2_3:13242075-13242094 Msa0279390:CDS 45.0%
!! GGACAAAGAGTGTTGCCTAA+TGG - chr2_3:13242096-13242115 Msa0279390:CDS 45.0%
! GACAAGAGAAACGGTAATGG+TGG + chr2_3:13242246-13242265 None:intergenic 45.0%
GCCGCAATTAAAATTGCCAG+AGG - chr2_3:13242284-13242303 Msa0279390:CDS 45.0%
AAAGCAGCGGAAGATGATGA+AGG - chr2_3:13242515-13242534 Msa0279390:CDS 45.0%
GCGGAAGATGATGAAGGAAA+TGG - chr2_3:13242521-13242540 Msa0279390:CDS 45.0%
AAAGATCTGCCAGGTGACTA+TGG - chr2_3:13242555-13242574 Msa0279390:CDS 45.0%
AATGTGGAGGAAGAAAGTGG+TGG - chr2_3:13242582-13242601 Msa0279390:CDS 45.0%
GTATCAGAATCGAAGGAAGC+AGG + chr2_3:13242648-13242667 None:intergenic 45.0%
!! GGTTTTGACATGCAGACTGT+TGG - chr2_3:13242912-13242931 Msa0279390:CDS 45.0%
! CGTGATGATGTTGCTTATGG+TGG - chr2_3:13243119-13243138 Msa0279390:CDS 45.0%
! TGTTGCTTATGGTGGCAGTT+TGG - chr2_3:13243127-13243146 Msa0279390:CDS 45.0%
!! GTTGATAATGAGCGTCCTAG+AGG + chr2_3:13243179-13243198 None:intergenic 45.0%
GACGCTCATTATCAACGCTT+GGG - chr2_3:13243183-13243202 Msa0279390:CDS 45.0%
AACGCTTGGGCTTTCTGTTA+TGG - chr2_3:13243196-13243215 Msa0279390:CDS 45.0%
AGGTTCGTATACCGTCCAAT+GGG + chr2_3:13243269-13243288 None:intergenic 45.0%
AAGGTTCGTATACCGTCCAA+TGG + chr2_3:13243270-13243289 None:intergenic 45.0%
!! TCAAATTGGCTCGTGCAACA+AGG + chr2_3:13243289-13243308 None:intergenic 45.0%
CGAGCCAATTTGAACAATCG+TGG - chr2_3:13243296-13243315 Msa0279390:CDS 45.0%
AGCCCCACGATTGTTCAAAT+TGG + chr2_3:13243303-13243322 None:intergenic 45.0%
AATTTGAACAATCGTGGGGC+TGG - chr2_3:13243302-13243321 Msa0279390:CDS 45.0%
TGAAGGAGAAAAGGAGAGGG+GGG - chr2_3:13239581-13239600 Msa0279390:CDS 50.0%
AAAAGGAGAGGGGGGATGTT+GGG - chr2_3:13239589-13239608 Msa0279390:CDS 50.0%
!! GTGGTTGAGGAGAGTGTTGT+GGG - chr2_3:13239612-13239631 Msa0279390:CDS 50.0%
! GGAAGGAGATGAGGTTTTCG+AGG - chr2_3:13239656-13239675 Msa0279390:CDS 50.0%
!! AGGAGATGAGGTTTTCGAGG+AGG - chr2_3:13239659-13239678 Msa0279390:CDS 50.0%
! GGGGGTTGTTGATGAGTTTG+TGG - chr2_3:13239860-13239879 Msa0279390:CDS 50.0%
GTTTGTGGAACGTCTGAACG+AGG - chr2_3:13239875-13239894 Msa0279390:CDS 50.0%
! GGTACTGAAGAGACTGAGGA+CGG - chr2_3:13239972-13239991 Msa0279390:CDS 50.0%
! TGAGGACGGAGTAACTTGTG+AGG - chr2_3:13239986-13240005 Msa0279390:CDS 50.0%
! TGATGGAAGCACGGTGTTTC+AGG - chr2_3:13240070-13240089 Msa0279390:CDS 50.0%
GTGACGCCTAGACAAAATGG+TGG - chr2_3:13240164-13240183 Msa0279390:CDS 50.0%
GCCTAGACAAAATGGTGGCA+TGG - chr2_3:13240169-13240188 Msa0279390:CDS 50.0%
!! AATGAGAAACCAGGGTGCTG+AGG - chr2_3:13240268-13240287 Msa0279390:CDS 50.0%
! AGTGGCTTGGATCCTGATGT+TGG - chr2_3:13240308-13240327 Msa0279390:CDS 50.0%
GAAGTGGAGGATGAGACCAT+TGG - chr2_3:13240461-13240480 Msa0279390:CDS 50.0%
!! TGATACGGTGTCATCCTCCT+CGG + chr2_3:13240579-13240598 None:intergenic 50.0%
! TTCAGAAGAAGGGAGTACGG+AGG - chr2_3:13240748-13240767 Msa0279390:CDS 50.0%
!! CTTCTCCGGCTTTGGATGAA+AGG - chr2_3:13240855-13240874 Msa0279390:CDS 50.0%
! GCTACTGCAGCTGATTCAGA+AGG - chr2_3:13240734-13240753 Msa0279390:CDS 50.0%
! GTAATGGAGCAGCAGTTCCA+AGG + chr2_3:13241183-13241202 None:intergenic 50.0%
TGGAACTGCTGCTCCATTAC+TGG - chr2_3:13241183-13241202 Msa0279390:CDS 50.0%
CTAGGAGCAGGTTCCAGTAA+TGG + chr2_3:13241199-13241218 None:intergenic 50.0%
CATTACTGGAACCTGCTCCT+AGG - chr2_3:13241197-13241216 Msa0279390:CDS 50.0%
CGAGTCTCATCAGATTCCTC+AGG + chr2_3:13241301-13241320 None:intergenic 50.0%
! TAGGGTGAAGTTTTTGCGGC+TGG - chr2_3:13241339-13241358 Msa0279390:CDS 50.0%
! TTGCGGCTGGCTAATAGGTT+TGG - chr2_3:13241352-13241371 Msa0279390:CDS 50.0%
! TGCGGCTGGCTAATAGGTTT+GGG - chr2_3:13241353-13241372 Msa0279390:CDS 50.0%
! GACTGGCTGAGCAACTTAGA+GGG - chr2_3:13241422-13241441 Msa0279390:CDS 50.0%
GAGCAACTTAGAGGGAGGAA+TGG - chr2_3:13241430-13241449 Msa0279390:CDS 50.0%
GCAACTTAGAGGGAGGAATG+GGG - chr2_3:13241432-13241451 Msa0279390:CDS 50.0%
CAACTTAGAGGGAGGAATGG+GGG - chr2_3:13241433-13241452 Msa0279390:CDS 50.0%
CTTTGATCGTGCAAGTGCGA+TGG - chr2_3:13241474-13241493 Msa0279390:CDS 50.0%
!! ACCTGCTGATTCGAGTTGCT+CGG + chr2_3:13241500-13241519 None:intergenic 50.0%
GATGTTGTGGGCATGGTACA+GGG - chr2_3:13241658-13241677 Msa0279390:CDS 50.0%
! GGTACAGGGCATTAAAGTCC+GGG - chr2_3:13241672-13241691 Msa0279390:CDS 50.0%
GTCCTGGTGTATCAATGACC+CGG + chr2_3:13241693-13241712 None:intergenic 50.0%
CACCAGGACTTCTACCTTCT+TGG - chr2_3:13241704-13241723 Msa0279390:CDS 50.0%
GACCAAGAAGGTAGAAGTCC+TGG + chr2_3:13241709-13241728 None:intergenic 50.0%
GGATCTTCTCATTGTGTGGC+TGG + chr2_3:13241735-13241754 None:intergenic 50.0%
ATCACCAGCTGCTTGACGAA+TGG + chr2_3:13242013-13242032 None:intergenic 50.0%
TGGTTCTCCACCAACGATAC+AGG + chr2_3:13242051-13242070 None:intergenic 50.0%
!! AAGAGTGTTGCCTAATGGGC+AGG - chr2_3:13242101-13242120 Msa0279390:CDS 50.0%
! TGTTGCCTAATGGGCAGGTT+TGG - chr2_3:13242106-13242125 Msa0279390:CDS 50.0%
GGTTTCCAAACCTGCCCATT+AGG + chr2_3:13242114-13242133 None:intergenic 50.0%
! GCTGTGTAAGGCTTTTCACG+TGG + chr2_3:13242210-13242229 None:intergenic 50.0%
TGTCATCCCTTCTGCAGTCA+AGG - chr2_3:13242262-13242281 Msa0279390:CDS 50.0%
CTGATCTGGGCCTTTGTCAA+AGG + chr2_3:13242405-13242424 None:intergenic 50.0%
GAATCGGTGAAAGATCTGCC+AGG - chr2_3:13242546-13242565 Msa0279390:CDS 50.0%
GACATATCAGGCATGGGAAC+AGG + chr2_3:13242621-13242640 None:intergenic 50.0%
GGCAAGGACATATCAGGCAT+GGG + chr2_3:13242627-13242646 None:intergenic 50.0%
AGGCAAGGACATATCAGGCA+TGG + chr2_3:13242628-13242647 None:intergenic 50.0%
GAAGCAGGCAAGGACATATC+AGG + chr2_3:13242633-13242652 None:intergenic 50.0%
AGAATCGAAGGAAGCAGGCA+AGG + chr2_3:13242643-13242662 None:intergenic 50.0%
!! CGTGGGAGTATCAGAATCGA+AGG + chr2_3:13242655-13242674 None:intergenic 50.0%
ATTCTGATACTCCCACGCAC+CGG - chr2_3:13242658-13242677 Msa0279390:CDS 50.0%
CGACCTGTCCTAGAAACTCA+CGG - chr2_3:13242717-13242736 Msa0279390:CDS 50.0%
TGTCCTAGAAACTCACGGCT+GGG - chr2_3:13242722-13242741 Msa0279390:CDS 50.0%
GAAGGGAAAGCAACGTCGTT+AGG - chr2_3:13242891-13242910 Msa0279390:CDS 50.0%
GCAGACTGTTGGGAAAGACT+TGG - chr2_3:13242923-13242942 Msa0279390:CDS 50.0%
CGGAGAAATAAGGCAACTGC+TGG - chr2_3:13242984-13243003 Msa0279390:CDS 50.0%
! ATTGCTGGTGGTGCAATGAC+AGG - chr2_3:13243095-13243114 Msa0279390:CDS 50.0%
! TTGCTGGTGGTGCAATGACA+GGG - chr2_3:13243096-13243115 Msa0279390:CDS 50.0%
! GGGCGTGATGATGTTGCTTA+TGG - chr2_3:13243116-13243135 Msa0279390:CDS 50.0%
TGCTTATGGTGGCAGTTTGG+AGG - chr2_3:13243130-13243149 Msa0279390:CDS 50.0%
GGACGCTCATTATCAACGCT+TGG - chr2_3:13243182-13243201 Msa0279390:CDS 50.0%
! TGGCATGGAGATCTTGCTGT+TGG - chr2_3:13243221-13243240 Msa0279390:CDS 50.0%
!! GGCATGGAGATCTTGCTGTT+GGG - chr2_3:13243222-13243241 Msa0279390:CDS 50.0%
GAAAAGGAGAGGGGGGATGT+TGG - chr2_3:13239588-13239607 Msa0279390:CDS 55.0%
AAAGGAGAGGGGGGATGTTG+GGG - chr2_3:13239590-13239609 Msa0279390:CDS 55.0%
!! GGTGGTTGAGGAGAGTGTTG+TGG - chr2_3:13239611-13239630 Msa0279390:CDS 55.0%
TGTGGAACGTCTGAACGAGG+AGG - chr2_3:13239878-13239897 Msa0279390:CDS 55.0%
! TGGAAGCACGGTGTTTCAGG+AGG - chr2_3:13240073-13240092 Msa0279390:CDS 55.0%
! GGAAGCACGGTGTTTCAGGA+GGG - chr2_3:13240074-13240093 Msa0279390:CDS 55.0%
GTTTCAGGAGGGCAGAGACT+TGG - chr2_3:13240085-13240104 Msa0279390:CDS 55.0%
!! GAGGGCAGAGACTTGGTGAA+TGG - chr2_3:13240092-13240111 Msa0279390:CDS 55.0%
AGTAGGATCTTCTCTGGCCG+TGG - chr2_3:13240631-13240650 Msa0279390:CDS 55.0%
CTGAATCAGCTGCAGTAGCC+TGG + chr2_3:13240733-13240752 None:intergenic 55.0%
AGGAGGATCTTCTCCGGCTT+TGG - chr2_3:13240847-13240866 Msa0279390:CDS 55.0%
AGGCCAACAGGACGAACAAG+CGG + chr2_3:13241163-13241182 None:intergenic 55.0%
! CTTGTTCGTCCTGTTGGCCT+TGG - chr2_3:13241163-13241182 Msa0279390:CDS 55.0%
!! GGACTGGCTGAGCAACTTAG+AGG - chr2_3:13241421-13241440 Msa0279390:CDS 55.0%
TGGCTGAGCAACTTAGAGGG+AGG - chr2_3:13241425-13241444 Msa0279390:CDS 55.0%
GGTTCAGGATGTTGTGGGCA+TGG - chr2_3:13241651-13241670 Msa0279390:CDS 55.0%
GGATGTTGTGGGCATGGTAC+AGG - chr2_3:13241657-13241676 Msa0279390:CDS 55.0%
GTCCGGGTCATTGATACACC+AGG - chr2_3:13241688-13241707 Msa0279390:CDS 55.0%
!! TGTGGCTGGTCTGACCAAGA+AGG + chr2_3:13241721-13241740 None:intergenic 55.0%
GTACCATTAGGGCCATCAGG+TGG + chr2_3:13241937-13241956 None:intergenic 55.0%
! GGAGTACCATTAGGGCCATC+AGG + chr2_3:13241940-13241959 None:intergenic 55.0%
CAAGCCATTCGTCAAGCAGC+TGG - chr2_3:13242006-13242025 Msa0279390:CDS 55.0%
TTGCGGCCTTGACTGCAGAA+GGG + chr2_3:13242271-13242290 None:intergenic 55.0%
ATTGCGGCCTTGACTGCAGA+AGG + chr2_3:13242272-13242291 None:intergenic 55.0%
TCGTCGCTGAATTGCTCCTC+TGG + chr2_3:13242303-13242322 None:intergenic 55.0%
AGAGGAGCAATTCAGCGACG+AGG - chr2_3:13242302-13242321 Msa0279390:CDS 55.0%
AGGCATGGGAACAGGAACAG+AGG + chr2_3:13242613-13242632 None:intergenic 55.0%
AGATGACGATACCGGTGCGT+GGG + chr2_3:13242672-13242691 None:intergenic 55.0%
AAGATGACGATACCGGTGCG+TGG + chr2_3:13242673-13242692 None:intergenic 55.0%
AGGTCGTACAAGCCACTGGT+TGG + chr2_3:13242703-13242722 None:intergenic 55.0%
!! CAGCCGTGAGTTTCTAGGAC+AGG + chr2_3:13242723-13242742 None:intergenic 55.0%
CTGTCCTAGAAACTCACGGC+TGG - chr2_3:13242721-13242740 Msa0279390:CDS 55.0%
GATCCCAGCCGTGAGTTTCT+AGG + chr2_3:13242728-13242747 None:intergenic 55.0%
TCACGGCTGGGATCATGATG+TGG - chr2_3:13242734-13242753 Msa0279390:CDS 55.0%
CACGGCTGGGATCATGATGT+GGG - chr2_3:13242735-13242754 Msa0279390:CDS 55.0%
CTCTTGGGTGATGCCTTGTC+AGG - chr2_3:13243020-13243039 Msa0279390:CDS 55.0%
TTGGGTGATGCCTTGTCAGG+TGG - chr2_3:13243023-13243042 Msa0279390:CDS 55.0%
GGAGGAGTCTGTGGATCAGC+AGG - chr2_3:13239923-13239942 Msa0279390:CDS 60.0%
!! AGAAACCAGGGTGCTGAGGC+TGG - chr2_3:13240272-13240291 Msa0279390:CDS 60.0%
!! GAAACCAGGGTGCTGAGGCT+GGG - chr2_3:13240273-13240292 Msa0279390:CDS 60.0%
AATACCCAGCCTCAGCACCC+TGG + chr2_3:13240280-13240299 None:intergenic 60.0%
GCTGCAGTAGCCTGGACAGT+CGG + chr2_3:13240725-13240744 None:intergenic 60.0%
ACCCCGCTTGTTCGTCCTGT+TGG - chr2_3:13241157-13241176 Msa0279390:CDS 60.0%
GCCAACAGGACGAACAAGCG+GGG + chr2_3:13241161-13241180 None:intergenic 60.0%
GGCCAACAGGACGAACAAGC+GGG + chr2_3:13241162-13241181 None:intergenic 60.0%
GCAGCAGTTCCAAGGCCAAC+AGG + chr2_3:13241175-13241194 None:intergenic 60.0%
TTCCTCAGGCTCCGCAGTTG+AGG + chr2_3:13241287-13241306 None:intergenic 60.0%
GCCGAGCAACTCGAATCAGC+AGG - chr2_3:13241496-13241515 Msa0279390:CDS 60.0%
GCTCCACCTGATGGCCCTAA+TGG - chr2_3:13241931-13241950 Msa0279390:CDS 60.0%
GCTCTTGTGCGCGCTGTGTA+AGG + chr2_3:13242222-13242241 None:intergenic 60.0%
GGACAGGTCGTACAAGCCAC+TGG + chr2_3:13242707-13242726 None:intergenic 60.0%
GGGGGATGTTGGGGTGGTTG+AGG - chr2_3:13239599-13239618 Msa0279390:CDS 65.0%
TGCTGCGCAACCCTAGGAGC+AGG + chr2_3:13241211-13241230 None:intergenic 65.0%
CTAGGGTTGCGCAGCAGCCA+CGG - chr2_3:13241215-13241234 Msa0279390:CDS 65.0%
TAGGGTTGCGCAGCAGCCAC+GGG - chr2_3:13241216-13241235 Msa0279390:CDS 65.0%
CTCCTCAACTGCGGAGCCTG+AGG - chr2_3:13241282-13241301 Msa0279390:CDS 65.0%
!! GCAGCATCGGCTCCACCTGA+TGG - chr2_3:13241922-13241941 Msa0279390:CDS 65.0%
GGAGAGGGGGGATGTTGGGG+TGG - chr2_3:13239593-13239612 Msa0279390:CDS 70.0%
CGTGGCTGCTGCGCAACCCT+AGG + chr2_3:13241217-13241236 None:intergenic 70.0%
GGGAGGAATGGGGGCCGTGT+TGG - chr2_3:13241442-13241461 Msa0279390:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 13239573 13243445 13239573 ID=Msa0279390;Name=Msa0279390
chr2_3 mRNA 13239573 13243445 13239573 ID=Msa0279390-mRNA-1;Parent=Msa0279390;Name=Msa0279390-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|1290
chr2_3 exon 13239573 13243445 13239573 ID=Msa0279390-mRNA-1:exon:5690;Parent=Msa0279390-mRNA-1
chr2_3 CDS 13239573 13243445 13239573 ID=Msa0279390-mRNA-1:cds;Parent=Msa0279390-mRNA-1
Gene Sequence

>Msa0279390

ATGGATAATGAAGGAGAAAAGGAGAGGGGGGATGTTGGGGTGGTTGAGGAGAGTGTTGTGGGATCTAATGAGTCGAAGAATTTGGAAGGAGATGAGGTTTTCGAGGAGGCGATAGACCCGTTAAAGCATTTTGATAATCTGGGTGATGATGTTGATGTTGCTGGTGCTGTTAGTTCATTGCCTTCGGATTTGGTTGATGTTGCTGCTACTGTTAGTTCATTGCCTTCAGATTCGGTTGATGAAATTGGTGATAACGTAGAAGAATTGGATAATTTTCAAGAGTCGGTGGGGGTTGTTGATGAGTTTGTGGAACGTCTGAACGAGGAGGAAGATGAAGTGATTGATAATCAGGAGGAGTCTGTGGATCAGCAGGTGAAGCTTTACAGCGCTTTTCTAGATGGTACTGAAGAGACTGAGGACGGAGTAACTTGTGAGGAATCGTATGGTATCAAGGATGATTGTAGTGGAGGAAAGGAGGAGTTAGCCGATTTAAACACTGATGGAAGCACGGTGTTTCAGGAGGGCAGAGACTTGGTGAATGGAAACTCAGGTTTGTCAAGTGAGGAGATTGAAAATGAGGATGTTGAATTTGTGACGCCTAGACAAAATGGTGGCATGGTTTTGGAAAATGGAAGCACGAACAAGGTGGGTTATGCTGTTGATGAGTTGCATACAGAATTTGGATCCGATGAGGAAATGAGAAACCAGGGTGCTGAGGCTGGGTATTTGAAAGAGAGTGGCTTGGATCCTGATGTTGGAGATGACAAGATAGAGGAACAGTTCAATGCTTCAGGTGATCCTTCTAGTGAAATTCAAGATGATACAGGGGAAAAAGCACACAGACATTCAGCTCATGAGTATTTAGAACCTCGTCAGGAAAAATTTACAGAAGTGGAGGATGAGACCATTGGCCCTGATATAATCCACAAGGATACAGATGACAAAGAAACGGTAATATCTGATAGTCAGAGTACTGAATGCAAAGTTTATTGTAATGATGAAACCGAGGAGGATGACACCGTATCAAATTCAGAGCATCTGGAAACAATTGATGAAACAGTAGGATCTTCTCTGGCCGTGGATGAAAGAAAAGTGATTGAAACCTCTGGTATCTCTTCCCTATCAGAAAGTTCTTTTGCTAATGAGATACCGACTGTCCAGGCTACTGCAGCTGATTCAGAAGAAGGGAGTACGGAGGTTTACCAGTCTGAGATTTCTAATGAAGAAAATCATGAAAACTTATCTGTTGTTGGAAGAAGTGAAGCGATTGAAACAGGAGGATCTTCTCCGGCTTTGGATGAAAGGAAAGTGACTGAAACTGTCGGAAGCTCATTCCCATCAGAAAACTCTTTTTCTAATGAGATGACATCTGTTCAGGCTACTGCAGCTGATTCAGAAGGGAGTACAAAGGTTTACCTGTCTCAGATTTCTAATGAAGAAAATCAAGGAGATAATGAAAAATCGTCTGTTGTGGAACCTGAAAAGATACCTGAGAATAACATGAAAGAGAAGCAAACCTCTCAGATCACTAAAGAACGGAATAGTGAGCTTGATTCCTCATCTGGAAAATCTGTTGCTACTAGCACCCCGCTTGTTCGTCCTGTTGGCCTTGGAACTGCTGCTCCATTACTGGAACCTGCTCCTAGGGTTGCGCAGCAGCCACGGGTCAATTATACTGTATCTAATACACAGTCCCAGAAAATGGAAGACTCCTCAACTGCGGAGCCTGAGGAATCTGATGAGACTCGAGAGAAACTTCAAATGATTAGGGTGAAGTTTTTGCGGCTGGCTAATAGGTTTGGGCAGACACCCCACAATGTTGTTGTAGCACAAGTTCTTTATAGATTAGGACTGGCTGAGCAACTTAGAGGGAGGAATGGGGGCCGTGTTGGCGCTTTTAGCTTTGATCGTGCAAGTGCGATGGCCGAGCAACTCGAATCAGCAGGTCAAGAACCACTTGATTTCTCTTGTACAATAATGGTTCTTGGAAAGTCAGGAGTTGGAAAAAGTTCAACTATCAATTCTATCTTTGACGAGGTTAAATTTAATACGGATGCTTTTCATACGGGAACGAAAAAGGTTCAGGATGTTGTGGGCATGGTACAGGGCATTAAAGTCCGGGTCATTGATACACCAGGACTTCTACCTTCTTGGTCAGACCAGCCACACAATGAGAAGATCCTGCACTCTGTCAAACGTTTTATTAAGAAAACCCCTCCAGATATTGTGCTTTATCTAGATAGATTAGATATGCAGAGCCGGGATTTTAGTGATATGCCTCTCTTACGCACAATAACTGACATTTTTGGACCACCCATATGGTTCAATGCTATTGTGGTTTTGACTCATGCAGCATCGGCTCCACCTGATGGCCCTAATGGTACTCCTTCCAGTTATGACATGTTTGTTACACAGCGCTCTCATGTTGTGCAGCAAGCCATTCGTCAAGCAGCTGGTGATATGCGTCTTATGAATCCTGTATCGTTGGTGGAGAACCACTCTGCATGTAGAACTAATACGGCTGGACAAAGAGTGTTGCCTAATGGGCAGGTTTGGAAACCTCAGCTGTTACTCTTATCTTTTGCGTCAAAAATTCTGGCTGAAGCAAATGCTCTTCTTAAGTTACAAGATAATCCACGTGAAAAGCCTTACACAGCGCGCACAAGAGCGCCACCATTACCGTTTCTCTTGTCATCCCTTCTGCAGTCAAGGCCGCAATTAAAATTGCCAGAGGAGCAATTCAGCGACGAGGATAGTCTCAATGACGATCTTGATGAACCATCAGATTCTGGTGATGAAACAGACCCTGATGACTTACCCCCATTTAAACCTTTGACAAAGGCCCAGATCAGAAACCTTTCTAGAGCTCAGAAGAAAGCATATCTAGACGAGGTTGAGTACCGAGAAAAACTCCTCATGAAGAAACAATTAAAGTATGAAAAAAAGCAGCGGAAGATGATGAAGGAAATGGCAGAATCGGTGAAAGATCTGCCAGGTGACTATGGAGAAAATGTGGAGGAAGAAAGTGGTGGTGCAGCCTCTGTTCCTGTTCCCATGCCTGATATGTCCTTGCCTGCTTCCTTCGATTCTGATACTCCCACGCACCGGTATCGTCATCTTGATTCATCCAACCAGTGGCTTGTACGACCTGTCCTAGAAACTCACGGCTGGGATCATGATGTGGGTTATGAAGGCTTAAATGTCGAAAGATTGTTTGTTCTTAAAGACAAGATACCAGTGTCTTTTAGTGGTCAAGTTACCAAGGATAAAAAGGATGCTAATGTTCAGATGGAAATGACAAGTTCGGTTAAATATGGAGAAGGGAAAGCAACGTCGTTAGGTTTTGACATGCAGACTGTTGGGAAAGACTTGGCTTACACATTACGTAGCGAGACAAAATTTTGTAACTTTCGGAGAAATAAGGCAACTGCTGGTCTCTCATTTACTCTCTTGGGTGATGCCTTGTCAGGTGGAGTTAAAATCGAAGATAAGTTGATTGCTAATAAGCGATTCAAGTTGGTTATTGCTGGTGGTGCAATGACAGGGCGTGATGATGTTGCTTATGGTGGCAGTTTGGAGGCCCAGTTGAGAGATAAAAATTACCCTCTAGGACGCTCATTATCAACGCTTGGGCTTTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGGTGCAATTTACAATCACAAATTCCCATTGGACGGTATACGAACCTTGTTGCACGAGCCAATTTGAACAATCGTGGGGCTGGACAAATTAGCATTCGATTGAATAGTTCAGAACAGCTTCAAATTGCTTTGATTGGCCTAATCCCTCTACTTAAGAAGGTTATTGGTTATTTTAAACAATTGCAGTTTGGACAAGATTATTGA

Protein sequence

>Msa0279390

MDNEGEKERGDVGVVEESVVGSNESKNLEGDEVFEEAIDPLKHFDNLGDDVDVAGAVSSLPSDLVDVAATVSSLPSDSVDEIGDNVEELDNFQESVGVVDEFVERLNEEEDEVIDNQEESVDQQVKLYSAFLDGTEETEDGVTCEESYGIKDDCSGGKEELADLNTDGSTVFQEGRDLVNGNSGLSSEEIENEDVEFVTPRQNGGMVLENGSTNKVGYAVDELHTEFGSDEEMRNQGAEAGYLKESGLDPDVGDDKIEEQFNASGDPSSEIQDDTGEKAHRHSAHEYLEPRQEKFTEVEDETIGPDIIHKDTDDKETVISDSQSTECKVYCNDETEEDDTVSNSEHLETIDETVGSSLAVDERKVIETSGISSLSESSFANEIPTVQATAADSEEGSTEVYQSEISNEENHENLSVVGRSEAIETGGSSPALDERKVTETVGSSFPSENSFSNEMTSVQATAADSEGSTKVYLSQISNEENQGDNEKSSVVEPEKIPENNMKEKQTSQITKERNSELDSSSGKSVATSTPLVRPVGLGTAAPLLEPAPRVAQQPRVNYTVSNTQSQKMEDSSTAEPEESDETREKLQMIRVKFLRLANRFGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLESAGQEPLDFSCTIMVLGKSGVGKSSTINSIFDEVKFNTDAFHTGTKKVQDVVGMVQGIKVRVIDTPGLLPSWSDQPHNEKILHSVKRFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITDIFGPPIWFNAIVVLTHAASAPPDGPNGTPSSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNTAGQRVLPNGQVWKPQLLLLSFASKILAEANALLKLQDNPREKPYTARTRAPPLPFLLSSLLQSRPQLKLPEEQFSDEDSLNDDLDEPSDSGDETDPDDLPPFKPLTKAQIRNLSRAQKKAYLDEVEYREKLLMKKQLKYEKKQRKMMKEMAESVKDLPGDYGENVEEESGGAASVPVPMPDMSLPASFDSDTPTHRYRHLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVLKDKIPVSFSGQVTKDKKDANVQMEMTSSVKYGEGKATSLGFDMQTVGKDLAYTLRSETKFCNFRRNKATAGLSFTLLGDALSGGVKIEDKLIANKRFKLVIAGGAMTGRDDVAYGGSLEAQLRDKNYPLGRSLSTLGLSVMDWHGDLAVGCNLQSQIPIGRYTNLVARANLNNRGAGQISIRLNSSEQLQIALIGLIPLLKKVIGYFKQLQFGQDY*