Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663120 | XP_003605138.1 | 99.773 | 440 | 1 | 0 | 1 | 440 | 1 | 440 | 0.0 | 907 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663120 | sp|O81312|GAE3_ARATH | 86.667 | 435 | 51 | 4 | 4 | 438 | 1 | 428 | 0.0 | 770 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663120 | G7JEN3 | 99.773 | 440 | 1 | 0 | 1 | 440 | 1 | 440 | 0.0 | 907 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005000 | Msa0663120 | -0.859736 | 3.365940e-63 | -8.615850e-47 |
| Msa0015940 | Msa0663120 | 0.814791 | 1.287113e-51 | -8.615850e-47 |
| Msa0050730 | Msa0663120 | 0.808323 | 3.277013e-50 | -8.615850e-47 |
| Msa0050760 | Msa0663120 | 0.809413 | 1.915935e-50 | -8.615850e-47 |
| Msa0053050 | Msa0663120 | -0.830051 | 3.649902e-55 | -8.615850e-47 |
| Msa0098390 | Msa0663120 | -0.856544 | 2.994451e-62 | -8.615850e-47 |
| Msa0119320 | Msa0663120 | 0.849989 | 2.269418e-60 | -8.615850e-47 |
| Msa0628500 | Msa0663120 | 0.803823 | 2.900053e-49 | -8.615850e-47 |
| Msa0663120 | Msa0689760 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa0663120 | Msa0716860 | 0.815595 | 8.528268e-52 | -8.615850e-47 |
| Msa0663120 | Msa0735620 | -0.802118 | 6.529292e-49 | -8.615850e-47 |
| Msa0663120 | Msa0747720 | -0.854720 | 1.019685e-61 | -8.615850e-47 |
| Msa0663120 | Msa0750330 | -0.808762 | 2.641524e-50 | -8.615850e-47 |
| Msa0663120 | Msa0820890 | 0.831225 | 1.883113e-55 | -8.615850e-47 |
| Msa0663120 | Msa0829190 | 0.823326 | 1.471223e-53 | -8.615850e-47 |
| Msa0663120 | Msa0893810 | 0.808331 | 3.264083e-50 | -8.615850e-47 |
| Msa0663120 | Msa0959010 | 0.816037 | 6.796436e-52 | -8.615850e-47 |
| Msa0663120 | Msa0981310 | 0.841067 | 5.950152e-58 | -8.615850e-47 |
| Msa0663120 | Msa0982240 | 0.844849 | 5.860023e-59 | -8.615850e-47 |
| Msa0663120 | Msa0993530 | 0.817832 | 2.687325e-52 | -8.615850e-47 |
| Msa0663120 | Msa1010460 | 0.808555 | 2.924030e-50 | -8.615850e-47 |
| Msa0663120 | Msa1032170 | 0.807157 | 5.796898e-50 | -8.615850e-47 |
| Msa0663120 | Msa1040520 | 0.815842 | 7.515248e-52 | -8.615850e-47 |
| Msa0663120 | Msa1080770 | 0.804260 | 2.352446e-49 | -8.615850e-47 |
| Msa0663120 | Msa1118040 | 0.804885 | 1.742641e-49 | -8.615850e-47 |
| Msa0663120 | Msa1127770 | 0.803938 | 2.744901e-49 | -8.615850e-47 |
| Msa0663120 | Msa1170800 | 0.820645 | 6.149670e-53 | -8.615850e-47 |
| Msa0663120 | Msa1174850 | 0.814414 | 1.559575e-51 | -8.615850e-47 |
| Msa0663120 | Msa1214320 | 0.817934 | 2.548483e-52 | -8.615850e-47 |
| Msa0663120 | Msa1228890 | 0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa0663120 | Msa1261070 | 0.810171 | 1.316212e-50 | -8.615850e-47 |
| Msa0663120 | Msa1262960 | 0.805297 | 1.428998e-49 | -8.615850e-47 |
| Msa0663120 | Msa1295630 | 0.815442 | 9.227052e-52 | -8.615850e-47 |
| Msa0663120 | Msa1299360 | 0.809236 | 2.090877e-50 | -8.615850e-47 |
| Msa0663120 | Msa1302060 | 0.834465 | 2.950328e-56 | -8.615850e-47 |
| Msa0663120 | Msa1338250 | 0.820122 | 8.103194e-53 | -8.615850e-47 |
| Msa0663120 | Msa1361770 | 0.827163 | 1.820296e-54 | -8.615850e-47 |
| Msa0663120 | Msa1370650 | 0.825621 | 4.243006e-54 | -8.615850e-47 |
| Msa0663120 | Msa1393800 | 0.811351 | 7.312223e-51 | -8.615850e-47 |
| Msa0663120 | Msa1398860 | 0.802720 | 4.907180e-49 | -8.615850e-47 |
| Msa0663120 | Msa1420250 | 0.810619 | 1.053290e-50 | -8.615850e-47 |
| Msa0663120 | Msa1422840 | 0.802225 | 6.207152e-49 | -8.615850e-47 |
| Msa0663120 | Msa1426910 | 0.807419 | 5.101830e-50 | -8.615850e-47 |
| Msa0663120 | Msa1435260 | 0.811184 | 7.949464e-51 | -8.615850e-47 |
| Msa0663120 | Msa1440600 | 0.809464 | 1.867689e-50 | -8.615850e-47 |
| Msa0663120 | Msa1447150 | 0.849516 | 3.075064e-60 | -8.615850e-47 |
| Msa0663120 | Msa1466460 | 0.816900 | 4.357314e-52 | -8.615850e-47 |
| Msa0138210 | Msa0663120 | 0.806209 | 9.194291e-50 | -8.615850e-47 |
| Msa0138950 | Msa0663120 | 0.824090 | 9.741996e-54 | -8.615850e-47 |
| Msa0222550 | Msa0663120 | 0.807296 | 5.418685e-50 | -8.615850e-47 |
| Msa0227230 | Msa0663120 | 0.810297 | 1.236423e-50 | -8.615850e-47 |
| Msa0229940 | Msa0663120 | 0.806749 | 7.072184e-50 | -8.615850e-47 |
| Msa0236770 | Msa0663120 | 0.842587 | 2.361178e-58 | -8.615850e-47 |
| Msa0381000 | Msa0663120 | 0.806642 | 7.450107e-50 | -8.615850e-47 |
| Msa0381080 | Msa0663120 | 0.802472 | 5.520807e-49 | -8.615850e-47 |
| Msa0390960 | Msa0663120 | 0.836590 | 8.557330e-57 | -8.615850e-47 |
| Msa0432480 | Msa0663120 | 0.823395 | 1.417400e-53 | -8.615850e-47 |
| Msa0467930 | Msa0663120 | 0.821643 | 3.619918e-53 | -8.615850e-47 |
| Msa0476880 | Msa0663120 | 0.814740 | 1.320719e-51 | -8.615850e-47 |
| Msa0277420 | Msa0663120 | 0.805861 | 1.088049e-49 | -8.615850e-47 |
| Msa0281360 | Msa0663120 | 0.823435 | 1.386985e-53 | -8.615850e-47 |
| Msa0301810 | Msa0663120 | 0.825923 | 3.597105e-54 | -8.615850e-47 |
| Msa0526940 | Msa0663120 | 0.805262 | 1.453277e-49 | -8.615850e-47 |
| Msa0529320 | Msa0663120 | 0.856288 | 3.561022e-62 | -8.615850e-47 |
| Msa0577200 | Msa0663120 | -0.807486 | 4.938170e-50 | -8.615850e-47 |
| Msa0580640 | Msa0663120 | 0.801657 | 8.119870e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663120 | MtrunA17_Chr4g0011281 | 99.773 | 440 | 1 | 0 | 1 | 440 | 1 | 440 | 0.0 | 907 |
| Msa0663120 | MtrunA17_Chr7g0230291 | 82.629 | 426 | 66 | 3 | 15 | 440 | 4 | 421 | 0.0 | 728 |
| Msa0663120 | MtrunA17_Chr4g0056941 | 69.431 | 422 | 125 | 3 | 11 | 432 | 7 | 424 | 0.0 | 603 |
| Msa0663120 | MtrunA17_Chr4g0073351 | 67.431 | 436 | 132 | 4 | 8 | 440 | 6 | 434 | 0.0 | 593 |
| Msa0663120 | MtrunA17_Chr3g0121661 | 66.047 | 430 | 134 | 3 | 13 | 432 | 3 | 430 | 0.0 | 585 |
| Msa0663120 | MtrunA17_Chr5g0398811 | 76.294 | 367 | 85 | 1 | 69 | 433 | 56 | 422 | 0.0 | 581 |
| Msa0663120 | MtrunA17_Chr8g0359401 | 27.545 | 334 | 213 | 8 | 102 | 428 | 8 | 319 | 8.54e-22 | 98.2 |
| Msa0663120 | MtrunA17_Chr8g0386331 | 28.614 | 332 | 199 | 12 | 103 | 412 | 8 | 323 | 1.11e-21 | 95.9 |
| Msa0663120 | MtrunA17_Chr2g0293521 | 26.087 | 345 | 219 | 12 | 103 | 427 | 73 | 401 | 2.03e-20 | 92.8 |
| Msa0663120 | MtrunA17_Chr2g0314601 | 26.822 | 343 | 208 | 8 | 102 | 430 | 8 | 321 | 2.19e-20 | 94.0 |
| Msa0663120 | MtrunA17_Chr5g0396581 | 26.039 | 361 | 230 | 12 | 91 | 433 | 38 | 379 | 2.59e-20 | 92.4 |
| Msa0663120 | MtrunA17_Chr8g0388261 | 27.576 | 330 | 205 | 12 | 102 | 412 | 5 | 319 | 6.06e-20 | 90.9 |
| Msa0663120 | MtrunA17_Chr1g0147841 | 25.519 | 337 | 220 | 10 | 102 | 430 | 6 | 319 | 2.43e-19 | 90.9 |
| Msa0663120 | MtrunA17_Chr4g0067461 | 25.397 | 441 | 251 | 17 | 8 | 425 | 20 | 405 | 5.01e-19 | 89.0 |
| Msa0663120 | MtrunA17_Chr5g0396571 | 26.923 | 338 | 203 | 11 | 99 | 412 | 2 | 319 | 8.21e-19 | 87.4 |
| Msa0663120 | MtrunA17_Chr8g0380921 | 25.143 | 350 | 226 | 11 | 103 | 432 | 73 | 406 | 1.05e-17 | 84.7 |
| Msa0663120 | MtrunA17_Chr4g0031131 | 24.471 | 331 | 212 | 11 | 98 | 421 | 29 | 328 | 2.23e-17 | 83.2 |
| Msa0663120 | MtrunA17_Chr1g0195521 | 24.929 | 353 | 206 | 12 | 98 | 425 | 115 | 433 | 7.00e-17 | 82.4 |
| Msa0663120 | MtrunA17_Chr7g0274131 | 25.000 | 336 | 210 | 13 | 103 | 427 | 31 | 335 | 1.90e-15 | 77.8 |
| Msa0663120 | MtrunA17_Chr1g0190771 | 24.189 | 339 | 214 | 12 | 101 | 427 | 28 | 335 | 6.17e-15 | 76.3 |
| Msa0663120 | MtrunA17_Chr2g0327981 | 24.324 | 333 | 210 | 12 | 98 | 421 | 35 | 334 | 1.27e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663120 | AT4G00110.1 | 86.667 | 435 | 51 | 4 | 4 | 438 | 1 | 428 | 0.0 | 770 |
| Msa0663120 | AT1G02000.1 | 84.828 | 435 | 59 | 5 | 7 | 439 | 1 | 430 | 0.0 | 751 |
| Msa0663120 | AT2G45310.1 | 78.851 | 435 | 88 | 3 | 7 | 438 | 1 | 434 | 0.0 | 693 |
| Msa0663120 | AT4G12250.1 | 73.059 | 438 | 105 | 4 | 7 | 437 | 1 | 432 | 0.0 | 621 |
| Msa0663120 | AT3G23820.1 | 77.557 | 352 | 79 | 0 | 81 | 432 | 92 | 443 | 0.0 | 582 |
| Msa0663120 | AT4G30440.1 | 67.907 | 430 | 126 | 4 | 11 | 438 | 6 | 425 | 0.0 | 564 |
| Msa0663120 | AT4G23920.1 | 27.350 | 351 | 215 | 12 | 102 | 430 | 4 | 336 | 4.24e-23 | 100 |
| Msa0663120 | AT1G12780.1 | 28.657 | 335 | 197 | 13 | 102 | 412 | 8 | 324 | 1.11e-22 | 99.0 |
| Msa0663120 | AT1G63180.1 | 28.443 | 334 | 199 | 12 | 102 | 412 | 8 | 324 | 5.13e-21 | 94.4 |
| Msa0663120 | AT1G78570.1 | 26.647 | 334 | 216 | 8 | 102 | 428 | 8 | 319 | 8.91e-21 | 95.5 |
| Msa0663120 | AT3G14790.2 | 26.647 | 334 | 216 | 8 | 102 | 428 | 11 | 322 | 2.30e-20 | 94.4 |
| Msa0663120 | AT3G14790.1 | 26.647 | 334 | 216 | 8 | 102 | 428 | 8 | 319 | 2.57e-20 | 94.4 |
| Msa0663120 | AT4G10960.1 | 26.891 | 357 | 209 | 13 | 102 | 430 | 5 | 337 | 7.81e-20 | 90.9 |
| Msa0663120 | AT1G30620.3 | 25.507 | 345 | 221 | 11 | 103 | 427 | 72 | 400 | 4.14e-19 | 89.4 |
| Msa0663120 | AT1G30620.1 | 25.507 | 345 | 221 | 11 | 103 | 427 | 73 | 401 | 4.53e-19 | 89.4 |
| Msa0663120 | AT1G30620.6 | 25.507 | 345 | 221 | 11 | 103 | 427 | 73 | 401 | 4.53e-19 | 89.4 |
| Msa0663120 | AT1G30620.4 | 25.507 | 345 | 221 | 11 | 103 | 427 | 73 | 401 | 4.53e-19 | 89.4 |
| Msa0663120 | AT1G30620.2 | 25.507 | 345 | 221 | 11 | 103 | 427 | 73 | 401 | 4.53e-19 | 89.4 |
| Msa0663120 | AT1G53500.1 | 26.393 | 341 | 208 | 8 | 102 | 428 | 10 | 321 | 9.18e-19 | 89.4 |
| Msa0663120 | AT5G44480.3 | 24.709 | 344 | 225 | 10 | 103 | 427 | 73 | 401 | 1.81e-18 | 87.4 |
| Msa0663120 | AT5G44480.4 | 24.709 | 344 | 225 | 10 | 103 | 427 | 73 | 401 | 1.81e-18 | 87.4 |
| Msa0663120 | AT5G44480.2 | 24.709 | 344 | 225 | 10 | 103 | 427 | 73 | 401 | 1.81e-18 | 87.4 |
| Msa0663120 | AT5G44480.1 | 24.709 | 344 | 225 | 10 | 103 | 427 | 97 | 425 | 2.19e-18 | 87.4 |
| Msa0663120 | AT3G62830.2 | 25.507 | 345 | 200 | 12 | 98 | 426 | 116 | 419 | 8.28e-18 | 85.9 |
| Msa0663120 | AT3G62830.1 | 25.507 | 345 | 200 | 12 | 98 | 426 | 116 | 419 | 8.28e-18 | 85.9 |
| Msa0663120 | AT3G53520.1 | 25.294 | 340 | 215 | 10 | 98 | 430 | 117 | 424 | 1.41e-17 | 85.1 |
| Msa0663120 | AT1G64440.1 | 25.281 | 356 | 220 | 12 | 102 | 434 | 4 | 336 | 1.43e-17 | 84.0 |
| Msa0663120 | AT2G47650.1 | 24.122 | 427 | 252 | 16 | 32 | 426 | 35 | 421 | 4.01e-17 | 83.6 |
| Msa0663120 | AT4G20460.1 | 25.212 | 353 | 227 | 12 | 96 | 427 | 64 | 400 | 4.57e-17 | 83.2 |
| Msa0663120 | AT2G28760.1 | 25.225 | 333 | 207 | 13 | 98 | 421 | 28 | 327 | 6.41e-17 | 82.0 |
| Msa0663120 | AT2G28760.2 | 25.225 | 333 | 207 | 13 | 98 | 421 | 28 | 327 | 6.41e-17 | 82.0 |
| Msa0663120 | AT2G28760.3 | 25.225 | 333 | 207 | 13 | 98 | 421 | 28 | 327 | 6.41e-17 | 82.0 |
| Msa0663120 | AT2G28760.4 | 25.225 | 333 | 207 | 13 | 98 | 421 | 59 | 358 | 8.40e-17 | 82.0 |
| Msa0663120 | AT1G63180.2 | 28.188 | 298 | 175 | 11 | 102 | 376 | 8 | 289 | 9.35e-17 | 81.3 |
| Msa0663120 | AT3G53520.2 | 25.000 | 340 | 214 | 11 | 98 | 430 | 117 | 422 | 1.73e-15 | 78.6 |
| Msa0663120 | AT2G47650.2 | 24.249 | 433 | 250 | 18 | 32 | 426 | 35 | 427 | 4.01e-15 | 77.4 |
| Msa0663120 | AT5G59290.2 | 24.085 | 328 | 207 | 12 | 103 | 421 | 47 | 341 | 7.62e-15 | 76.3 |
| Msa0663120 | AT5G59290.1 | 24.085 | 328 | 207 | 12 | 103 | 421 | 32 | 326 | 8.44e-15 | 75.9 |
| Msa0663120 | AT5G59290.4 | 24.085 | 328 | 207 | 12 | 103 | 421 | 3 | 297 | 9.26e-15 | 75.5 |
| Msa0663120 | AT5G59290.3 | 24.085 | 328 | 207 | 12 | 103 | 421 | 25 | 319 | 1.04e-14 | 75.5 |
| Msa0663120 | AT3G46440.2 | 23.353 | 334 | 214 | 12 | 97 | 421 | 25 | 325 | 1.25e-14 | 75.1 |
| Msa0663120 | AT3G46440.1 | 23.353 | 334 | 214 | 12 | 97 | 421 | 25 | 325 | 1.25e-14 | 75.1 |
| Msa0663120 | AT3G53520.3 | 27.083 | 240 | 153 | 6 | 98 | 331 | 117 | 340 | 2.61e-14 | 74.3 |
| Msa0663120 | AT3G53520.4 | 24.011 | 354 | 225 | 12 | 98 | 430 | 117 | 447 | 3.57e-14 | 74.7 |
| Msa0663120 | AT1G30620.5 | 27.128 | 188 | 133 | 3 | 103 | 288 | 73 | 258 | 1.38e-13 | 71.6 |
Find 118 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAGTTCTAGTTCTGTTTA+TGG | 0.169613 | 4_4:+1667879 | Msa0663120:CDS |
| GTTCTATCCCTTTCAGAAAA+AGG | 0.194999 | 4_4:-1667918 | None:intergenic |
| ATCTATGGTCTTTCTTTAAC+TGG | 0.228130 | 4_4:+1668011 | Msa0663120:CDS |
| ATCCTCAACCTTCAATTGTT+TGG | 0.242672 | 4_4:+1667856 | Msa0663120:CDS |
| CTCCGGCGAAGCTTTGTCTT+TGG | 0.247408 | 4_4:+1667316 | Msa0663120:CDS |
| TATCTGAATTACTATTCTTC+TGG | 0.256882 | 4_4:+1668488 | Msa0663120:CDS |
| TAGTGATCTTGTGGGTATTT+TGG | 0.296077 | 4_4:+1668307 | Msa0663120:CDS |
| TTCTCCATCTTGAACTTTCC+CGG | 0.301644 | 4_4:-1667258 | None:intergenic |
| TCCTCAACCTTCAATTGTTT+GGG | 0.302294 | 4_4:+1667857 | Msa0663120:CDS |
| AAATGCATCACATGAGTAAA+AGG | 0.305224 | 4_4:-1667729 | None:intergenic |
| TTTCACTGTTTATGGTCCTT+GGG | 0.318056 | 4_4:+1668043 | Msa0663120:CDS |
| TCCTTGGGGTAGGCCTGATA+TGG | 0.329537 | 4_4:+1668058 | Msa0663120:CDS |
| CAAACTGGGGTGGTCCCGTT+TGG | 0.334864 | 4_4:+1667439 | Msa0663120:CDS |
| GCGTGCAAGACAAGCACTTT+TGG | 0.348677 | 4_4:+1667632 | Msa0663120:CDS |
| GTCTTTCTTTAACTGGTTTG+AGG | 0.353381 | 4_4:+1668018 | Msa0663120:CDS |
| TATGTTCATAGTAACATTGC+TGG | 0.365279 | 4_4:+1667798 | Msa0663120:CDS |
| CATTGAGGAGTCCTTCAAAC+TGG | 0.372195 | 4_4:+1667424 | Msa0663120:CDS |
| CATACTTATAATCATATCTA+TGG | 0.374841 | 4_4:+1667996 | Msa0663120:CDS |
| CTCTTCCGGCGGACCCTTCA+CGG | 0.384471 | 4_4:+1667397 | Msa0663120:CDS |
| AAACTGGGGTGGTCCCGTTT+GGG | 0.395396 | 4_4:+1667440 | Msa0663120:CDS |
| TTATGAAGTTGCCGAGGAAT+GGG | 0.400306 | 4_4:+1668363 | Msa0663120:CDS |
| ATCTGAATTACTATTCTTCT+GGG | 0.411188 | 4_4:+1668489 | Msa0663120:CDS |
| CTGTTTATGGTCCTTGGGGT+AGG | 0.421551 | 4_4:+1668048 | Msa0663120:CDS |
| CTGGAAGTGGTGGGAAGAAG+AGG | 0.431142 | 4_4:+1668231 | Msa0663120:CDS |
| TCAATGATGCTGCTTTGTTA+AGG | 0.431669 | 4_4:+1667688 | Msa0663120:CDS |
| GTTCTTGTGACCGGAGCTGC+TGG | 0.437389 | 4_4:+1667513 | Msa0663120:CDS |
| TCCGGCGACTTCTCCTCTTC+CGG | 0.441112 | 4_4:+1667383 | Msa0663120:CDS |
| GGAGAGGCTGTTGAAGACTA+AGG | 0.452325 | 4_4:+1668328 | Msa0663120:CDS |
| TGTACGGTGGCACGCTTCTC+CGG | 0.452864 | 4_4:+1667299 | Msa0663120:CDS |
| GAACTAGCCCAAACAATTGA+AGG | 0.455646 | 4_4:-1667864 | None:intergenic |
| TGTCTTGCACGCTTCAAAGA+AGG | 0.457699 | 4_4:-1667621 | None:intergenic |
| ATACCCACAAGATCACTAAC+AGG | 0.465851 | 4_4:-1668302 | None:intergenic |
| AACAGTGCTCCGTCGACGCC+GGG | 0.468408 | 4_4:+1667240 | Msa0663120:CDS |
| ATTATGAAGTTGCCGAGGAA+TGG | 0.468878 | 4_4:+1668362 | Msa0663120:CDS |
| TGTTTATGGATTGAATACTA+AGG | 0.472188 | 4_4:+1667893 | Msa0663120:CDS |
| ATGCATTTGGCTGCTCAAGC+TGG | 0.474694 | 4_4:+1667744 | Msa0663120:CDS |
| ACAAGATCACTAACAGGAAC+AGG | 0.475033 | 4_4:-1668296 | None:intergenic |
| CGTGAAGGGTCCGCCGGAAG+AGG | 0.475778 | 4_4:-1667396 | None:intergenic |
| TCCGACGAAACCAGCAGCTC+CGG | 0.477531 | 4_4:-1667523 | None:intergenic |
| GCGCTTAAACGCCGCGGAGA+CGG | 0.482259 | 4_4:+1667561 | Msa0663120:CDS |
| GTTCCTGTTAGTGATCTTGT+GGG | 0.482574 | 4_4:+1668299 | Msa0663120:CDS |
| CGGAGAATCCGTTCCGTGAC+CGG | 0.489325 | 4_4:-1667491 | None:intergenic |
| TCCGTTCCTCCGCTAGAGTC+CGG | 0.497044 | 4_4:+1667472 | Msa0663120:CDS |
| CTCCAAAGACAAAGCTTCGC+CGG | 0.498173 | 4_4:-1667318 | None:intergenic |
| AGTTATGCGCAGAGAGAGCT+TGG | 0.500038 | 4_4:+1668413 | Msa0663120:CDS |
| CGGACACGTTTCTCCCAAAC+GGG | 0.500537 | 4_4:-1667453 | None:intergenic |
| GATACTGCTGAGAAGAGTAC+TGG | 0.501421 | 4_4:+1668212 | Msa0663120:CDS |
| TGGTGGGAAGAAGAGGGGTC+CGG | 0.502374 | 4_4:+1668238 | Msa0663120:CDS |
| CTTCTTACTTCAACCGTGTA+CGG | 0.502910 | 4_4:+1667283 | Msa0663120:CDS |
| ACGGGACCACCCCAGTTTGA+AGG | 0.504384 | 4_4:-1667435 | None:intergenic |
| AGAGGGGTCCGGCTCAGTTG+AGG | 0.506497 | 4_4:+1668249 | Msa0663120:CDS |
| GGATTCTCCGTTCTTGTGAC+CGG | 0.510300 | 4_4:+1667504 | Msa0663120:CDS |
| GACCGCCGTGAAGGGTCCGC+CGG | 0.515234 | 4_4:-1667402 | None:intergenic |
| TAAGCCGGTGACGGATCTGC+AGG | 0.518058 | 4_4:+1668439 | Msa0663120:CDS |
| GAGGGGTCCGGCTCAGTTGA+GGG | 0.518628 | 4_4:+1668250 | Msa0663120:CDS |
| TGTTCCTGTTAGTGATCTTG+TGG | 0.519953 | 4_4:+1668298 | Msa0663120:CDS |
| ACGGACACGTTTCTCCCAAA+CGG | 0.521018 | 4_4:-1667454 | None:intergenic |
| AGTATGCGCGATTTCTTCAC+CGG | 0.527758 | 4_4:-1667979 | None:intergenic |
| CTCCTCAATGACCGCCGTGA+AGG | 0.532413 | 4_4:-1667411 | None:intergenic |
| GCCCAAACAATTGAAGGTTG+AGG | 0.535698 | 4_4:-1667858 | None:intergenic |
| ACCGGAGCTGCTGGTTTCGT+CGG | 0.536422 | 4_4:+1667522 | Msa0663120:CDS |
| TGGAAGTGGTGGGAAGAAGA+GGG | 0.543352 | 4_4:+1668232 | Msa0663120:CDS |
| TTCACTGTTTATGGTCCTTG+GGG | 0.546844 | 4_4:+1668044 | Msa0663120:CDS |
| ACCCTTCACGGCGGTCATTG+AGG | 0.548511 | 4_4:+1667409 | Msa0663120:CDS |
| ATTGAGGAGTCCTTCAAACT+GGG | 0.549385 | 4_4:+1667425 | Msa0663120:CDS |
| TTATATTGATGATATTGTGA+GGG | 0.550359 | 4_4:+1668172 | Msa0663120:CDS |
| GAGGAGAAGTCGCCGGAGAA+CGG | 0.554120 | 4_4:-1667377 | None:intergenic |
| AACTGCACATCCCCATTCCT+CGG | 0.554769 | 4_4:-1668374 | None:intergenic |
| CCAGCCTGCAGATCCGTCAC+CGG | 0.555310 | 4_4:-1668443 | None:intergenic |
| TCCTCAATGACCGCCGTGAA+GGG | 0.559853 | 4_4:-1667410 | None:intergenic |
| TAACAGTGCTCCGTCGACGC+CGG | 0.562127 | 4_4:+1667239 | Msa0663120:CDS |
| GTAGCGGCATACAAACTAGC+AGG | 0.564565 | 4_4:-1667948 | None:intergenic |
| TTGAAAACCCTCAACTGAGC+CGG | 0.564710 | 4_4:-1668257 | None:intergenic |
| TTGAACTTTCCCGGCGTCGA+CGG | 0.565515 | 4_4:-1667249 | None:intergenic |
| TTCACCGGCTTTCTTAGTAG+CGG | 0.567698 | 4_4:-1667964 | None:intergenic |
| GAGAAGCGTGCCACCGTACA+CGG | 0.567964 | 4_4:-1667296 | None:intergenic |
| CCGGTGACGGATCTGCAGGC+TGG | 0.569584 | 4_4:+1668443 | Msa0663120:CDS |
| AGCAGCTCCGGTCACAAGAA+CGG | 0.569637 | 4_4:-1667511 | None:intergenic |
| ACCGGACTCTAGCGGAGGAA+CGG | 0.574251 | 4_4:-1667473 | None:intergenic |
| CTTATATTGATGATATTGTG+AGG | 0.578974 | 4_4:+1668171 | Msa0663120:CDS |
| CGAATCATGGTACCGTTGCG+AGG | 0.585042 | 4_4:+1668141 | Msa0663120:CDS |
| AGCTGGTGTGAGGTATGCTA+TGG | 0.586552 | 4_4:+1667761 | Msa0663120:CDS |
| AGGTATGCTATGGAGAATCC+TGG | 0.586560 | 4_4:+1667771 | Msa0663120:CDS |
| GAGAGAGCTTGGTTATAAGC+CGG | 0.588325 | 4_4:+1668424 | Msa0663120:CDS |
| GGCGACTTCTCCTCTTCCGG+CGG | 0.605382 | 4_4:+1667386 | Msa0663120:CDS |
| CCTCCGCTAGAGTCCGGTCA+CGG | 0.608900 | 4_4:+1667478 | Msa0663120:CDS |
| TATGAAGTTGCCGAGGAATG+GGG | 0.609964 | 4_4:+1668364 | Msa0663120:CDS |
| GCTAGAGTCCGGTCACGGAA+CGG | 0.610673 | 4_4:+1667483 | Msa0663120:CDS |
| GAATCATGGTACCGTTGCGA+GGG | 0.611200 | 4_4:+1668142 | Msa0663120:CDS |
| GCCGGAAGAGGAGAAGTCGC+CGG | 0.613076 | 4_4:-1667384 | None:intergenic |
| TATGCCGCTACTAAGAAAGC+CGG | 0.617216 | 4_4:+1667960 | Msa0663120:CDS |
| GCTTGGTTATAAGCCGGTGA+CGG | 0.621396 | 4_4:+1668430 | Msa0663120:CDS |
| GAGAAGAGTACTGGAAGTGG+TGG | 0.623154 | 4_4:+1668221 | Msa0663120:CDS |
| GTTTGAAGAAATTTGTGAGG+TGG | 0.624134 | 4_4:+1668465 | Msa0663120:CDS |
| TGGCTGCTCAAGCTGGTGTG+AGG | 0.625330 | 4_4:+1667751 | Msa0663120:CDS |
| GCCATATCAGGCCTACCCCA+AGG | 0.630669 | 4_4:-1668059 | None:intergenic |
| GCTGAGAAGAGTACTGGAAG+TGG | 0.633054 | 4_4:+1668218 | Msa0663120:CDS |
| GACGCCGGGAAAGTTCAAGA+TGG | 0.634115 | 4_4:+1667254 | Msa0663120:CDS |
| TCCGCGGCGCTTAAACGCCG+CGG | 0.635349 | 4_4:+1667555 | Msa0663120:CDS |
| TCCGCGGCGTTTAAGCGCCG+CGG | 0.637292 | 4_4:-1667556 | None:intergenic |
| GGAAGTGGTGGGAAGAAGAG+GGG | 0.637984 | 4_4:+1668233 | Msa0663120:CDS |
| CTGGTTTGAAGAAATTTGTG+AGG | 0.647230 | 4_4:+1668462 | Msa0663120:CDS |
| AGGAGTCCTTCAAACTGGGG+TGG | 0.647390 | 4_4:+1667429 | Msa0663120:CDS |
| ATAAGTAAAATCCCTCGCAA+CGG | 0.649166 | 4_4:-1668153 | None:intergenic |
| TCCCTAAAACACCGTCTCCG+CGG | 0.649971 | 4_4:-1667572 | None:intergenic |
| AGAAGAGTACTGGAAGTGGT+GGG | 0.649979 | 4_4:+1668222 | Msa0663120:CDS |
| GTTCCGTGACCGGACTCTAG+CGG | 0.650330 | 4_4:-1667481 | None:intergenic |
| GGAATATTATGAAGTTGCCG+AGG | 0.656687 | 4_4:+1668357 | Msa0663120:CDS |
| CTTACTTCAACCGTGTACGG+TGG | 0.659507 | 4_4:+1667286 | Msa0663120:CDS |
| CCGTGACCGGACTCTAGCGG+AGG | 0.659987 | 4_4:-1667478 | None:intergenic |
| TATATTGATGATATTGTGAG+GGG | 0.666488 | 4_4:+1668173 | Msa0663120:CDS |
| ATCACTAACAGGAACAGGCG+AGG | 0.666779 | 4_4:-1668291 | None:intergenic |
| TGTTGAAGACTAAGGCGAAG+AGG | 0.671437 | 4_4:+1668336 | Msa0663120:CDS |
| TTACTATGAACATAAGAACC+AGG | 0.683714 | 4_4:-1667789 | None:intergenic |
| TTGAGGAGTCCTTCAAACTG+GGG | 0.690015 | 4_4:+1667426 | Msa0663120:CDS |
| CGTCGGAACACATGTCTCCG+CGG | 0.690793 | 4_4:+1667539 | Msa0663120:CDS |
| TTCCGGCGGACCCTTCACGG+CGG | 0.735183 | 4_4:+1667400 | Msa0663120:CDS |
| ATATTGATGATATTGTGAGG+GGG | 0.741076 | 4_4:+1668174 | Msa0663120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATACTTATAATCATATCTA+TGG | + | chr4_4:1667996-1668015 | Msa0663120:CDS | 20.0% |
| !!! | TTATATTGATGATATTGTGA+GGG | + | chr4_4:1668172-1668191 | Msa0663120:CDS | 20.0% |
| !! | CATACTTATAATCATATCTA+TGG | + | chr4_4:1667996-1668015 | Msa0663120:CDS | 20.0% |
| !!! | TTATATTGATGATATTGTGA+GGG | + | chr4_4:1668172-1668191 | Msa0663120:CDS | 20.0% |
| !! | TGTTTATGGATTGAATACTA+AGG | + | chr4_4:1667893-1667912 | Msa0663120:CDS | 25.0% |
| ! | AAAAAGAAATAAGCCATATC+AGG | - | chr4_4:1668074-1668093 | None:intergenic | 25.0% |
| !!! | TTTCACTAGAGATATTTTGA+AGG | + | chr4_4:1668091-1668110 | Msa0663120:CDS | 25.0% |
| !!! | TTCACTAGAGATATTTTGAA+GGG | + | chr4_4:1668092-1668111 | Msa0663120:CDS | 25.0% |
| !! | CTTATATTGATGATATTGTG+AGG | + | chr4_4:1668171-1668190 | Msa0663120:CDS | 25.0% |
| !! | TATATTGATGATATTGTGAG+GGG | + | chr4_4:1668173-1668192 | Msa0663120:CDS | 25.0% |
| ! | TATCTGAATTACTATTCTTC+TGG | + | chr4_4:1668488-1668507 | Msa0663120:CDS | 25.0% |
| ! | ATCTGAATTACTATTCTTCT+GGG | + | chr4_4:1668489-1668508 | Msa0663120:CDS | 25.0% |
| !! | TGTTTATGGATTGAATACTA+AGG | + | chr4_4:1667893-1667912 | Msa0663120:CDS | 25.0% |
| ! | AAAAAGAAATAAGCCATATC+AGG | - | chr4_4:1668074-1668093 | None:intergenic | 25.0% |
| !!! | TTTCACTAGAGATATTTTGA+AGG | + | chr4_4:1668091-1668110 | Msa0663120:CDS | 25.0% |
| !!! | TTCACTAGAGATATTTTGAA+GGG | + | chr4_4:1668092-1668111 | Msa0663120:CDS | 25.0% |
| !! | CTTATATTGATGATATTGTG+AGG | + | chr4_4:1668171-1668190 | Msa0663120:CDS | 25.0% |
| !! | TATATTGATGATATTGTGAG+GGG | + | chr4_4:1668173-1668192 | Msa0663120:CDS | 25.0% |
| ! | TATCTGAATTACTATTCTTC+TGG | + | chr4_4:1668488-1668507 | Msa0663120:CDS | 25.0% |
| ! | ATCTGAATTACTATTCTTCT+GGG | + | chr4_4:1668489-1668508 | Msa0663120:CDS | 25.0% |
| ! | TTTGTTAAGGAAGCTTTTTG+AGG | + | chr4_4:1667701-1667720 | Msa0663120:CDS | 30.0% |
| AAATGCATCACATGAGTAAA+AGG | - | chr4_4:1667732-1667751 | None:intergenic | 30.0% | |
| ! | TTTTACTCATGTGATGCATT+TGG | + | chr4_4:1667731-1667750 | Msa0663120:CDS | 30.0% |
| TTACTATGAACATAAGAACC+AGG | - | chr4_4:1667792-1667811 | None:intergenic | 30.0% | |
| TATGTTCATAGTAACATTGC+TGG | + | chr4_4:1667798-1667817 | Msa0663120:CDS | 30.0% | |
| !!! | TGGTTTTGTTAATTTGCTTG+AGG | + | chr4_4:1667818-1667837 | Msa0663120:CDS | 30.0% |
| !! | TAAGGTTCCTTTTTCTGAAA+GGG | + | chr4_4:1667911-1667930 | Msa0663120:CDS | 30.0% |
| ATCTATGGTCTTTCTTTAAC+TGG | + | chr4_4:1668011-1668030 | Msa0663120:CDS | 30.0% | |
| ! | TTGAGGTTTTTCACTGTTTA+TGG | + | chr4_4:1668035-1668054 | Msa0663120:CDS | 30.0% |
| !! | TCACTAGAGATATTTTGAAG+GGG | + | chr4_4:1668093-1668112 | Msa0663120:CDS | 30.0% |
| !!! | GAAGACTATTCCTATTTTTG+AGG | + | chr4_4:1668115-1668134 | Msa0663120:CDS | 30.0% |
| ! | ATATTGATGATATTGTGAGG+GGG | + | chr4_4:1668174-1668193 | Msa0663120:CDS | 30.0% |
| ! | TTTGTTAAGGAAGCTTTTTG+AGG | + | chr4_4:1667701-1667720 | Msa0663120:CDS | 30.0% |
| AAATGCATCACATGAGTAAA+AGG | - | chr4_4:1667732-1667751 | None:intergenic | 30.0% | |
| ! | TTTTACTCATGTGATGCATT+TGG | + | chr4_4:1667731-1667750 | Msa0663120:CDS | 30.0% |
| TTACTATGAACATAAGAACC+AGG | - | chr4_4:1667792-1667811 | None:intergenic | 30.0% | |
| TATGTTCATAGTAACATTGC+TGG | + | chr4_4:1667798-1667817 | Msa0663120:CDS | 30.0% | |
| !!! | TGGTTTTGTTAATTTGCTTG+AGG | + | chr4_4:1667818-1667837 | Msa0663120:CDS | 30.0% |
| !! | TAAGGTTCCTTTTTCTGAAA+GGG | + | chr4_4:1667911-1667930 | Msa0663120:CDS | 30.0% |
| ATCTATGGTCTTTCTTTAAC+TGG | + | chr4_4:1668011-1668030 | Msa0663120:CDS | 30.0% | |
| ! | TTGAGGTTTTTCACTGTTTA+TGG | + | chr4_4:1668035-1668054 | Msa0663120:CDS | 30.0% |
| !! | TCACTAGAGATATTTTGAAG+GGG | + | chr4_4:1668093-1668112 | Msa0663120:CDS | 30.0% |
| !!! | GAAGACTATTCCTATTTTTG+AGG | + | chr4_4:1668115-1668134 | Msa0663120:CDS | 30.0% |
| ! | ATATTGATGATATTGTGAGG+GGG | + | chr4_4:1668174-1668193 | Msa0663120:CDS | 30.0% |
| ! | ACTGGTGTTTTCATTGTTGA+AGG | + | chr4_4:1667660-1667679 | Msa0663120:CDS | 35.0% |
| !! | TCAATGATGCTGCTTTGTTA+AGG | + | chr4_4:1667688-1667707 | Msa0663120:CDS | 35.0% |
| ATCCTCAACCTTCAATTGTT+TGG | + | chr4_4:1667856-1667875 | Msa0663120:CDS | 35.0% | |
| TCCTCAACCTTCAATTGTTT+GGG | + | chr4_4:1667857-1667876 | Msa0663120:CDS | 35.0% | |
| !! | GCTAGTTCTAGTTCTGTTTA+TGG | + | chr4_4:1667879-1667898 | Msa0663120:CDS | 35.0% |
| ! | CTAAGGTTCCTTTTTCTGAA+AGG | + | chr4_4:1667910-1667929 | Msa0663120:CDS | 35.0% |
| GTTCTATCCCTTTCAGAAAA+AGG | - | chr4_4:1667921-1667940 | None:intergenic | 35.0% | |
| !! | GTCTTTCTTTAACTGGTTTG+AGG | + | chr4_4:1668018-1668037 | Msa0663120:CDS | 35.0% |
| ! | TTTTCACTGTTTATGGTCCT+TGG | + | chr4_4:1668042-1668061 | Msa0663120:CDS | 35.0% |
| TTTCACTGTTTATGGTCCTT+GGG | + | chr4_4:1668043-1668062 | Msa0663120:CDS | 35.0% | |
| !!! | GACTATTCCTATTTTTGAGG+CGG | + | chr4_4:1668118-1668137 | Msa0663120:CDS | 35.0% |
| ATAAGTAAAATCCCTCGCAA+CGG | - | chr4_4:1668156-1668175 | None:intergenic | 35.0% | |
| ! | TCAGTTGAGGGTTTTCAATT+TGG | + | chr4_4:1668262-1668281 | Msa0663120:CDS | 35.0% |
| ! | CAGTTGAGGGTTTTCAATTT+GGG | + | chr4_4:1668263-1668282 | Msa0663120:CDS | 35.0% |
| ! | AGTTGAGGGTTTTCAATTTG+GGG | + | chr4_4:1668264-1668283 | Msa0663120:CDS | 35.0% |
| ! | TAGTGATCTTGTGGGTATTT+TGG | + | chr4_4:1668307-1668326 | Msa0663120:CDS | 35.0% |
| ! | CTGGTTTGAAGAAATTTGTG+AGG | + | chr4_4:1668462-1668481 | Msa0663120:CDS | 35.0% |
| GTTTGAAGAAATTTGTGAGG+TGG | + | chr4_4:1668465-1668484 | Msa0663120:CDS | 35.0% | |
| ! | ACTGGTGTTTTCATTGTTGA+AGG | + | chr4_4:1667660-1667679 | Msa0663120:CDS | 35.0% |
| !! | TCAATGATGCTGCTTTGTTA+AGG | + | chr4_4:1667688-1667707 | Msa0663120:CDS | 35.0% |
| ATCCTCAACCTTCAATTGTT+TGG | + | chr4_4:1667856-1667875 | Msa0663120:CDS | 35.0% | |
| TCCTCAACCTTCAATTGTTT+GGG | + | chr4_4:1667857-1667876 | Msa0663120:CDS | 35.0% | |
| !! | GCTAGTTCTAGTTCTGTTTA+TGG | + | chr4_4:1667879-1667898 | Msa0663120:CDS | 35.0% |
| ! | CTAAGGTTCCTTTTTCTGAA+AGG | + | chr4_4:1667910-1667929 | Msa0663120:CDS | 35.0% |
| GTTCTATCCCTTTCAGAAAA+AGG | - | chr4_4:1667921-1667940 | None:intergenic | 35.0% | |
| !! | GTCTTTCTTTAACTGGTTTG+AGG | + | chr4_4:1668018-1668037 | Msa0663120:CDS | 35.0% |
| ! | TTTTCACTGTTTATGGTCCT+TGG | + | chr4_4:1668042-1668061 | Msa0663120:CDS | 35.0% |
| TTTCACTGTTTATGGTCCTT+GGG | + | chr4_4:1668043-1668062 | Msa0663120:CDS | 35.0% | |
| !!! | GACTATTCCTATTTTTGAGG+CGG | + | chr4_4:1668118-1668137 | Msa0663120:CDS | 35.0% |
| ATAAGTAAAATCCCTCGCAA+CGG | - | chr4_4:1668156-1668175 | None:intergenic | 35.0% | |
| ! | TCAGTTGAGGGTTTTCAATT+TGG | + | chr4_4:1668262-1668281 | Msa0663120:CDS | 35.0% |
| ! | CAGTTGAGGGTTTTCAATTT+GGG | + | chr4_4:1668263-1668282 | Msa0663120:CDS | 35.0% |
| ! | AGTTGAGGGTTTTCAATTTG+GGG | + | chr4_4:1668264-1668283 | Msa0663120:CDS | 35.0% |
| ! | TAGTGATCTTGTGGGTATTT+TGG | + | chr4_4:1668307-1668326 | Msa0663120:CDS | 35.0% |
| ! | CTGGTTTGAAGAAATTTGTG+AGG | + | chr4_4:1668462-1668481 | Msa0663120:CDS | 35.0% |
| GTTTGAAGAAATTTGTGAGG+TGG | + | chr4_4:1668465-1668484 | Msa0663120:CDS | 35.0% | |
| TTCTCCATCTTGAACTTTCC+CGG | - | chr4_4:1667261-1667280 | None:intergenic | 40.0% | |
| CTTCTTACTTCAACCGTGTA+CGG | + | chr4_4:1667283-1667302 | Msa0663120:CDS | 40.0% | |
| ! | GATCTTCTTTTTCCGTTCTC+CGG | + | chr4_4:1667365-1667384 | Msa0663120:CDS | 40.0% |
| ATTGAGGAGTCCTTCAAACT+GGG | + | chr4_4:1667425-1667444 | Msa0663120:CDS | 40.0% | |
| GAACTAGCCCAAACAATTGA+AGG | - | chr4_4:1667867-1667886 | None:intergenic | 40.0% | |
| TTCACTGTTTATGGTCCTTG+GGG | + | chr4_4:1668044-1668063 | Msa0663120:CDS | 40.0% | |
| ACAAGATCACTAACAGGAAC+AGG | - | chr4_4:1668299-1668318 | None:intergenic | 40.0% | |
| TGTTCCTGTTAGTGATCTTG+TGG | + | chr4_4:1668298-1668317 | Msa0663120:CDS | 40.0% | |
| GTTCCTGTTAGTGATCTTGT+GGG | + | chr4_4:1668299-1668318 | Msa0663120:CDS | 40.0% | |
| ATACCCACAAGATCACTAAC+AGG | - | chr4_4:1668305-1668324 | None:intergenic | 40.0% | |
| !! | ATCTTGTGGGTATTTTGGAG+AGG | + | chr4_4:1668312-1668331 | Msa0663120:CDS | 40.0% |
| GGAATATTATGAAGTTGCCG+AGG | + | chr4_4:1668357-1668376 | Msa0663120:CDS | 40.0% | |
| ATTATGAAGTTGCCGAGGAA+TGG | + | chr4_4:1668362-1668381 | Msa0663120:CDS | 40.0% | |
| TTATGAAGTTGCCGAGGAAT+GGG | + | chr4_4:1668363-1668382 | Msa0663120:CDS | 40.0% | |
| TTCTCCATCTTGAACTTTCC+CGG | - | chr4_4:1667261-1667280 | None:intergenic | 40.0% | |
| CTTCTTACTTCAACCGTGTA+CGG | + | chr4_4:1667283-1667302 | Msa0663120:CDS | 40.0% | |
| ! | GATCTTCTTTTTCCGTTCTC+CGG | + | chr4_4:1667365-1667384 | Msa0663120:CDS | 40.0% |
| ATTGAGGAGTCCTTCAAACT+GGG | + | chr4_4:1667425-1667444 | Msa0663120:CDS | 40.0% | |
| GAACTAGCCCAAACAATTGA+AGG | - | chr4_4:1667867-1667886 | None:intergenic | 40.0% | |
| TTCACTGTTTATGGTCCTTG+GGG | + | chr4_4:1668044-1668063 | Msa0663120:CDS | 40.0% | |
| ACAAGATCACTAACAGGAAC+AGG | - | chr4_4:1668299-1668318 | None:intergenic | 40.0% | |
| TGTTCCTGTTAGTGATCTTG+TGG | + | chr4_4:1668298-1668317 | Msa0663120:CDS | 40.0% | |
| GTTCCTGTTAGTGATCTTGT+GGG | + | chr4_4:1668299-1668318 | Msa0663120:CDS | 40.0% | |
| ATACCCACAAGATCACTAAC+AGG | - | chr4_4:1668305-1668324 | None:intergenic | 40.0% | |
| !! | ATCTTGTGGGTATTTTGGAG+AGG | + | chr4_4:1668312-1668331 | Msa0663120:CDS | 40.0% |
| GGAATATTATGAAGTTGCCG+AGG | + | chr4_4:1668357-1668376 | Msa0663120:CDS | 40.0% | |
| ATTATGAAGTTGCCGAGGAA+TGG | + | chr4_4:1668362-1668381 | Msa0663120:CDS | 40.0% | |
| TTATGAAGTTGCCGAGGAAT+GGG | + | chr4_4:1668363-1668382 | Msa0663120:CDS | 40.0% | |
| CATTGAGGAGTCCTTCAAAC+TGG | + | chr4_4:1667424-1667443 | Msa0663120:CDS | 45.0% | |
| TTGAGGAGTCCTTCAAACTG+GGG | + | chr4_4:1667426-1667445 | Msa0663120:CDS | 45.0% | |
| TGTCTTGCACGCTTCAAAGA+AGG | - | chr4_4:1667624-1667643 | None:intergenic | 45.0% | |
| !!! | CAAGCACTTTTGGAACGTAC+TGG | + | chr4_4:1667642-1667661 | Msa0663120:CDS | 45.0% |
| AGGTATGCTATGGAGAATCC+TGG | + | chr4_4:1667771-1667790 | Msa0663120:CDS | 45.0% | |
| GCCCAAACAATTGAAGGTTG+AGG | - | chr4_4:1667861-1667880 | None:intergenic | 45.0% | |
| TATGCCGCTACTAAGAAAGC+CGG | + | chr4_4:1667960-1667979 | Msa0663120:CDS | 45.0% | |
| !! | TTCACCGGCTTTCTTAGTAG+CGG | - | chr4_4:1667967-1667986 | None:intergenic | 45.0% |
| AGTATGCGCGATTTCTTCAC+CGG | - | chr4_4:1667982-1668001 | None:intergenic | 45.0% | |
| TGATTCGCCGCCTCAAAAAT+AGG | - | chr4_4:1668128-1668147 | None:intergenic | 45.0% | |
| !!! | ATTTTTGAGGCGGCGAATCA+TGG | + | chr4_4:1668128-1668147 | Msa0663120:CDS | 45.0% |
| !! | GATATTGTGAGGGGGTGTTT+AGG | + | chr4_4:1668182-1668201 | Msa0663120:CDS | 45.0% |
| ! | GATACTGCTGAGAAGAGTAC+TGG | + | chr4_4:1668212-1668231 | Msa0663120:CDS | 45.0% |
| !! | AGAAGAGTACTGGAAGTGGT+GGG | + | chr4_4:1668222-1668241 | Msa0663120:CDS | 45.0% |
| TTGAAAACCCTCAACTGAGC+CGG | - | chr4_4:1668260-1668279 | None:intergenic | 45.0% | |
| TGTTGAAGACTAAGGCGAAG+AGG | + | chr4_4:1668336-1668355 | Msa0663120:CDS | 45.0% | |
| TATGAAGTTGCCGAGGAATG+GGG | + | chr4_4:1668364-1668383 | Msa0663120:CDS | 45.0% | |
| GAGAGAGCTTGGTTATAAGC+CGG | + | chr4_4:1668424-1668443 | Msa0663120:CDS | 45.0% | |
| CATTGAGGAGTCCTTCAAAC+TGG | + | chr4_4:1667424-1667443 | Msa0663120:CDS | 45.0% | |
| TTGAGGAGTCCTTCAAACTG+GGG | + | chr4_4:1667426-1667445 | Msa0663120:CDS | 45.0% | |
| TGTCTTGCACGCTTCAAAGA+AGG | - | chr4_4:1667624-1667643 | None:intergenic | 45.0% | |
| !!! | CAAGCACTTTTGGAACGTAC+TGG | + | chr4_4:1667642-1667661 | Msa0663120:CDS | 45.0% |
| AGGTATGCTATGGAGAATCC+TGG | + | chr4_4:1667771-1667790 | Msa0663120:CDS | 45.0% | |
| GCCCAAACAATTGAAGGTTG+AGG | - | chr4_4:1667861-1667880 | None:intergenic | 45.0% | |
| TATGCCGCTACTAAGAAAGC+CGG | + | chr4_4:1667960-1667979 | Msa0663120:CDS | 45.0% | |
| !! | TTCACCGGCTTTCTTAGTAG+CGG | - | chr4_4:1667967-1667986 | None:intergenic | 45.0% |
| AGTATGCGCGATTTCTTCAC+CGG | - | chr4_4:1667982-1668001 | None:intergenic | 45.0% | |
| TGATTCGCCGCCTCAAAAAT+AGG | - | chr4_4:1668128-1668147 | None:intergenic | 45.0% | |
| !!! | ATTTTTGAGGCGGCGAATCA+TGG | + | chr4_4:1668128-1668147 | Msa0663120:CDS | 45.0% |
| !! | GATATTGTGAGGGGGTGTTT+AGG | + | chr4_4:1668182-1668201 | Msa0663120:CDS | 45.0% |
| ! | GATACTGCTGAGAAGAGTAC+TGG | + | chr4_4:1668212-1668231 | Msa0663120:CDS | 45.0% |
| !! | AGAAGAGTACTGGAAGTGGT+GGG | + | chr4_4:1668222-1668241 | Msa0663120:CDS | 45.0% |
| TTGAAAACCCTCAACTGAGC+CGG | - | chr4_4:1668260-1668279 | None:intergenic | 45.0% | |
| TGTTGAAGACTAAGGCGAAG+AGG | + | chr4_4:1668336-1668355 | Msa0663120:CDS | 45.0% | |
| TATGAAGTTGCCGAGGAATG+GGG | + | chr4_4:1668364-1668383 | Msa0663120:CDS | 45.0% | |
| GAGAGAGCTTGGTTATAAGC+CGG | + | chr4_4:1668424-1668443 | Msa0663120:CDS | 45.0% | |
| CTTACTTCAACCGTGTACGG+TGG | + | chr4_4:1667286-1667305 | Msa0663120:CDS | 50.0% | |
| CTCCAAAGACAAAGCTTCGC+CGG | - | chr4_4:1667321-1667340 | None:intergenic | 50.0% | |
| ACGGACACGTTTCTCCCAAA+CGG | - | chr4_4:1667457-1667476 | None:intergenic | 50.0% | |
| GGATTCTCCGTTCTTGTGAC+CGG | + | chr4_4:1667504-1667523 | Msa0663120:CDS | 50.0% | |
| ! | GCGTGCAAGACAAGCACTTT+TGG | + | chr4_4:1667632-1667651 | Msa0663120:CDS | 50.0% |
| ATGCATTTGGCTGCTCAAGC+TGG | + | chr4_4:1667744-1667763 | Msa0663120:CDS | 50.0% | |
| AGCTGGTGTGAGGTATGCTA+TGG | + | chr4_4:1667761-1667780 | Msa0663120:CDS | 50.0% | |
| GTAGCGGCATACAAACTAGC+AGG | - | chr4_4:1667951-1667970 | None:intergenic | 50.0% | |
| CTGTTTATGGTCCTTGGGGT+AGG | + | chr4_4:1668048-1668067 | Msa0663120:CDS | 50.0% | |
| GAATCATGGTACCGTTGCGA+GGG | + | chr4_4:1668142-1668161 | Msa0663120:CDS | 50.0% | |
| !! | GCTGAGAAGAGTACTGGAAG+TGG | + | chr4_4:1668218-1668237 | Msa0663120:CDS | 50.0% |
| !! | GAGAAGAGTACTGGAAGTGG+TGG | + | chr4_4:1668221-1668240 | Msa0663120:CDS | 50.0% |
| ! | TGGAAGTGGTGGGAAGAAGA+GGG | + | chr4_4:1668232-1668251 | Msa0663120:CDS | 50.0% |
| ATCACTAACAGGAACAGGCG+AGG | - | chr4_4:1668294-1668313 | None:intergenic | 50.0% | |
| GGAGAGGCTGTTGAAGACTA+AGG | + | chr4_4:1668328-1668347 | Msa0663120:CDS | 50.0% | |
| AACTGCACATCCCCATTCCT+CGG | - | chr4_4:1668377-1668396 | None:intergenic | 50.0% | |
| AGTTATGCGCAGAGAGAGCT+TGG | + | chr4_4:1668413-1668432 | Msa0663120:CDS | 50.0% | |
| GCTTGGTTATAAGCCGGTGA+CGG | + | chr4_4:1668430-1668449 | Msa0663120:CDS | 50.0% | |
| CTTACTTCAACCGTGTACGG+TGG | + | chr4_4:1667286-1667305 | Msa0663120:CDS | 50.0% | |
| CTCCAAAGACAAAGCTTCGC+CGG | - | chr4_4:1667321-1667340 | None:intergenic | 50.0% | |
| ACGGACACGTTTCTCCCAAA+CGG | - | chr4_4:1667457-1667476 | None:intergenic | 50.0% | |
| GGATTCTCCGTTCTTGTGAC+CGG | + | chr4_4:1667504-1667523 | Msa0663120:CDS | 50.0% | |
| ! | GCGTGCAAGACAAGCACTTT+TGG | + | chr4_4:1667632-1667651 | Msa0663120:CDS | 50.0% |
| ATGCATTTGGCTGCTCAAGC+TGG | + | chr4_4:1667744-1667763 | Msa0663120:CDS | 50.0% | |
| AGCTGGTGTGAGGTATGCTA+TGG | + | chr4_4:1667761-1667780 | Msa0663120:CDS | 50.0% | |
| GTAGCGGCATACAAACTAGC+AGG | - | chr4_4:1667951-1667970 | None:intergenic | 50.0% | |
| CTGTTTATGGTCCTTGGGGT+AGG | + | chr4_4:1668048-1668067 | Msa0663120:CDS | 50.0% | |
| GAATCATGGTACCGTTGCGA+GGG | + | chr4_4:1668142-1668161 | Msa0663120:CDS | 50.0% | |
| !! | GCTGAGAAGAGTACTGGAAG+TGG | + | chr4_4:1668218-1668237 | Msa0663120:CDS | 50.0% |
| !! | GAGAAGAGTACTGGAAGTGG+TGG | + | chr4_4:1668221-1668240 | Msa0663120:CDS | 50.0% |
| ! | TGGAAGTGGTGGGAAGAAGA+GGG | + | chr4_4:1668232-1668251 | Msa0663120:CDS | 50.0% |
| ATCACTAACAGGAACAGGCG+AGG | - | chr4_4:1668294-1668313 | None:intergenic | 50.0% | |
| GGAGAGGCTGTTGAAGACTA+AGG | + | chr4_4:1668328-1668347 | Msa0663120:CDS | 50.0% | |
| AACTGCACATCCCCATTCCT+CGG | - | chr4_4:1668377-1668396 | None:intergenic | 50.0% | |
| AGTTATGCGCAGAGAGAGCT+TGG | + | chr4_4:1668413-1668432 | Msa0663120:CDS | 50.0% | |
| GCTTGGTTATAAGCCGGTGA+CGG | + | chr4_4:1668430-1668449 | Msa0663120:CDS | 50.0% | |
| ! | TTGAACTTTCCCGGCGTCGA+CGG | - | chr4_4:1667252-1667271 | None:intergenic | 55.0% |
| GACGCCGGGAAAGTTCAAGA+TGG | + | chr4_4:1667254-1667273 | Msa0663120:CDS | 55.0% | |
| ! | CTCCGGCGAAGCTTTGTCTT+TGG | + | chr4_4:1667316-1667335 | Msa0663120:CDS | 55.0% |
| TCCTCAATGACCGCCGTGAA+GGG | - | chr4_4:1667413-1667432 | None:intergenic | 55.0% | |
| AGGAGTCCTTCAAACTGGGG+TGG | + | chr4_4:1667429-1667448 | Msa0663120:CDS | 55.0% | |
| AAACTGGGGTGGTCCCGTTT+GGG | + | chr4_4:1667440-1667459 | Msa0663120:CDS | 55.0% | |
| CGGACACGTTTCTCCCAAAC+GGG | - | chr4_4:1667456-1667475 | None:intergenic | 55.0% | |
| AGCAGCTCCGGTCACAAGAA+CGG | - | chr4_4:1667514-1667533 | None:intergenic | 55.0% | |
| TCCCTAAAACACCGTCTCCG+CGG | - | chr4_4:1667575-1667594 | None:intergenic | 55.0% | |
| TCCTTGGGGTAGGCCTGATA+TGG | + | chr4_4:1668058-1668077 | Msa0663120:CDS | 55.0% | |
| CGAATCATGGTACCGTTGCG+AGG | + | chr4_4:1668141-1668160 | Msa0663120:CDS | 55.0% | |
| !! | GAGGGGGTGTTTAGGTGCTT+TGG | + | chr4_4:1668190-1668209 | Msa0663120:CDS | 55.0% |
| ! | CTGGAAGTGGTGGGAAGAAG+AGG | + | chr4_4:1668231-1668250 | Msa0663120:CDS | 55.0% |
| ! | GGAAGTGGTGGGAAGAAGAG+GGG | + | chr4_4:1668233-1668252 | Msa0663120:CDS | 55.0% |
| ! | TTGAACTTTCCCGGCGTCGA+CGG | - | chr4_4:1667252-1667271 | None:intergenic | 55.0% |
| GACGCCGGGAAAGTTCAAGA+TGG | + | chr4_4:1667254-1667273 | Msa0663120:CDS | 55.0% | |
| ! | CTCCGGCGAAGCTTTGTCTT+TGG | + | chr4_4:1667316-1667335 | Msa0663120:CDS | 55.0% |
| TCCTCAATGACCGCCGTGAA+GGG | - | chr4_4:1667413-1667432 | None:intergenic | 55.0% | |
| AGGAGTCCTTCAAACTGGGG+TGG | + | chr4_4:1667429-1667448 | Msa0663120:CDS | 55.0% | |
| AAACTGGGGTGGTCCCGTTT+GGG | + | chr4_4:1667440-1667459 | Msa0663120:CDS | 55.0% | |
| CGGACACGTTTCTCCCAAAC+GGG | - | chr4_4:1667456-1667475 | None:intergenic | 55.0% | |
| AGCAGCTCCGGTCACAAGAA+CGG | - | chr4_4:1667514-1667533 | None:intergenic | 55.0% | |
| TCCCTAAAACACCGTCTCCG+CGG | - | chr4_4:1667575-1667594 | None:intergenic | 55.0% | |
| TCCTTGGGGTAGGCCTGATA+TGG | + | chr4_4:1668058-1668077 | Msa0663120:CDS | 55.0% | |
| CGAATCATGGTACCGTTGCG+AGG | + | chr4_4:1668141-1668160 | Msa0663120:CDS | 55.0% | |
| !! | GAGGGGGTGTTTAGGTGCTT+TGG | + | chr4_4:1668190-1668209 | Msa0663120:CDS | 55.0% |
| ! | CTGGAAGTGGTGGGAAGAAG+AGG | + | chr4_4:1668231-1668250 | Msa0663120:CDS | 55.0% |
| ! | GGAAGTGGTGGGAAGAAGAG+GGG | + | chr4_4:1668233-1668252 | Msa0663120:CDS | 55.0% |
| TAACAGTGCTCCGTCGACGC+CGG | + | chr4_4:1667239-1667258 | Msa0663120:CDS | 60.0% | |
| ! | GAGAAGCGTGCCACCGTACA+CGG | - | chr4_4:1667299-1667318 | None:intergenic | 60.0% |
| TGTACGGTGGCACGCTTCTC+CGG | + | chr4_4:1667299-1667318 | Msa0663120:CDS | 60.0% | |
| GAGGAGAAGTCGCCGGAGAA+CGG | - | chr4_4:1667380-1667399 | None:intergenic | 60.0% | |
| TCCGGCGACTTCTCCTCTTC+CGG | + | chr4_4:1667383-1667402 | Msa0663120:CDS | 60.0% | |
| ACCCTTCACGGCGGTCATTG+AGG | + | chr4_4:1667409-1667428 | Msa0663120:CDS | 60.0% | |
| CTCCTCAATGACCGCCGTGA+AGG | - | chr4_4:1667414-1667433 | None:intergenic | 60.0% | |
| ACGGGACCACCCCAGTTTGA+AGG | - | chr4_4:1667438-1667457 | None:intergenic | 60.0% | |
| CAAACTGGGGTGGTCCCGTT+TGG | + | chr4_4:1667439-1667458 | Msa0663120:CDS | 60.0% | |
| TCCGTTCCTCCGCTAGAGTC+CGG | + | chr4_4:1667472-1667491 | Msa0663120:CDS | 60.0% | |
| ACCGGACTCTAGCGGAGGAA+CGG | - | chr4_4:1667476-1667495 | None:intergenic | 60.0% | |
| GTTCCGTGACCGGACTCTAG+CGG | - | chr4_4:1667484-1667503 | None:intergenic | 60.0% | |
| GCTAGAGTCCGGTCACGGAA+CGG | + | chr4_4:1667483-1667502 | Msa0663120:CDS | 60.0% | |
| CGGAGAATCCGTTCCGTGAC+CGG | - | chr4_4:1667494-1667513 | None:intergenic | 60.0% | |
| GTTCTTGTGACCGGAGCTGC+TGG | + | chr4_4:1667513-1667532 | Msa0663120:CDS | 60.0% | |
| !! | ACCGGAGCTGCTGGTTTCGT+CGG | + | chr4_4:1667522-1667541 | Msa0663120:CDS | 60.0% |
| TCCGACGAAACCAGCAGCTC+CGG | - | chr4_4:1667526-1667545 | None:intergenic | 60.0% | |
| CGTCGGAACACATGTCTCCG+CGG | + | chr4_4:1667539-1667558 | Msa0663120:CDS | 60.0% | |
| ! | GCCGCGGAGACGGTGTTTTA+GGG | + | chr4_4:1667571-1667590 | Msa0663120:CDS | 60.0% |
| TGGCTGCTCAAGCTGGTGTG+AGG | + | chr4_4:1667751-1667770 | Msa0663120:CDS | 60.0% | |
| GCCATATCAGGCCTACCCCA+AGG | - | chr4_4:1668062-1668081 | None:intergenic | 60.0% | |
| TGGTGGGAAGAAGAGGGGTC+CGG | + | chr4_4:1668238-1668257 | Msa0663120:CDS | 60.0% | |
| !! | TAAGCCGGTGACGGATCTGC+AGG | + | chr4_4:1668439-1668458 | Msa0663120:CDS | 60.0% |
| TAACAGTGCTCCGTCGACGC+CGG | + | chr4_4:1667239-1667258 | Msa0663120:CDS | 60.0% | |
| ! | GAGAAGCGTGCCACCGTACA+CGG | - | chr4_4:1667299-1667318 | None:intergenic | 60.0% |
| TGTACGGTGGCACGCTTCTC+CGG | + | chr4_4:1667299-1667318 | Msa0663120:CDS | 60.0% | |
| GAGGAGAAGTCGCCGGAGAA+CGG | - | chr4_4:1667380-1667399 | None:intergenic | 60.0% | |
| TCCGGCGACTTCTCCTCTTC+CGG | + | chr4_4:1667383-1667402 | Msa0663120:CDS | 60.0% | |
| ACCCTTCACGGCGGTCATTG+AGG | + | chr4_4:1667409-1667428 | Msa0663120:CDS | 60.0% | |
| CTCCTCAATGACCGCCGTGA+AGG | - | chr4_4:1667414-1667433 | None:intergenic | 60.0% | |
| ACGGGACCACCCCAGTTTGA+AGG | - | chr4_4:1667438-1667457 | None:intergenic | 60.0% | |
| CAAACTGGGGTGGTCCCGTT+TGG | + | chr4_4:1667439-1667458 | Msa0663120:CDS | 60.0% | |
| TCCGTTCCTCCGCTAGAGTC+CGG | + | chr4_4:1667472-1667491 | Msa0663120:CDS | 60.0% | |
| ACCGGACTCTAGCGGAGGAA+CGG | - | chr4_4:1667476-1667495 | None:intergenic | 60.0% | |
| GTTCCGTGACCGGACTCTAG+CGG | - | chr4_4:1667484-1667503 | None:intergenic | 60.0% | |
| GCTAGAGTCCGGTCACGGAA+CGG | + | chr4_4:1667483-1667502 | Msa0663120:CDS | 60.0% | |
| CGGAGAATCCGTTCCGTGAC+CGG | - | chr4_4:1667494-1667513 | None:intergenic | 60.0% | |
| GTTCTTGTGACCGGAGCTGC+TGG | + | chr4_4:1667513-1667532 | Msa0663120:CDS | 60.0% | |
| !! | ACCGGAGCTGCTGGTTTCGT+CGG | + | chr4_4:1667522-1667541 | Msa0663120:CDS | 60.0% |
| TCCGACGAAACCAGCAGCTC+CGG | - | chr4_4:1667526-1667545 | None:intergenic | 60.0% | |
| CGTCGGAACACATGTCTCCG+CGG | + | chr4_4:1667539-1667558 | Msa0663120:CDS | 60.0% | |
| ! | GCCGCGGAGACGGTGTTTTA+GGG | + | chr4_4:1667571-1667590 | Msa0663120:CDS | 60.0% |
| TGGCTGCTCAAGCTGGTGTG+AGG | + | chr4_4:1667751-1667770 | Msa0663120:CDS | 60.0% | |
| GCCATATCAGGCCTACCCCA+AGG | - | chr4_4:1668062-1668081 | None:intergenic | 60.0% | |
| TGGTGGGAAGAAGAGGGGTC+CGG | + | chr4_4:1668238-1668257 | Msa0663120:CDS | 60.0% | |
| !! | TAAGCCGGTGACGGATCTGC+AGG | + | chr4_4:1668439-1668458 | Msa0663120:CDS | 60.0% |
| AACAGTGCTCCGTCGACGCC+GGG | + | chr4_4:1667240-1667259 | Msa0663120:CDS | 65.0% | |
| GCCGGAAGAGGAGAAGTCGC+CGG | - | chr4_4:1667387-1667406 | None:intergenic | 65.0% | |
| GGCGACTTCTCCTCTTCCGG+CGG | + | chr4_4:1667386-1667405 | Msa0663120:CDS | 65.0% | |
| CTCTTCCGGCGGACCCTTCA+CGG | + | chr4_4:1667397-1667416 | Msa0663120:CDS | 65.0% | |
| CCTCCGCTAGAGTCCGGTCA+CGG | + | chr4_4:1667478-1667497 | Msa0663120:CDS | 65.0% | |
| GCGCTTAAACGCCGCGGAGA+CGG | + | chr4_4:1667561-1667580 | Msa0663120:CDS | 65.0% | |
| ! | CGCCGCGGAGACGGTGTTTT+AGG | + | chr4_4:1667570-1667589 | Msa0663120:CDS | 65.0% |
| AGAGGGGTCCGGCTCAGTTG+AGG | + | chr4_4:1668249-1668268 | Msa0663120:CDS | 65.0% | |
| GAGGGGTCCGGCTCAGTTGA+GGG | + | chr4_4:1668250-1668269 | Msa0663120:CDS | 65.0% | |
| CCAGCCTGCAGATCCGTCAC+CGG | - | chr4_4:1668446-1668465 | None:intergenic | 65.0% | |
| AACAGTGCTCCGTCGACGCC+GGG | + | chr4_4:1667240-1667259 | Msa0663120:CDS | 65.0% | |
| GCCGGAAGAGGAGAAGTCGC+CGG | - | chr4_4:1667387-1667406 | None:intergenic | 65.0% | |
| GGCGACTTCTCCTCTTCCGG+CGG | + | chr4_4:1667386-1667405 | Msa0663120:CDS | 65.0% | |
| CTCTTCCGGCGGACCCTTCA+CGG | + | chr4_4:1667397-1667416 | Msa0663120:CDS | 65.0% | |
| CCTCCGCTAGAGTCCGGTCA+CGG | + | chr4_4:1667478-1667497 | Msa0663120:CDS | 65.0% | |
| GCGCTTAAACGCCGCGGAGA+CGG | + | chr4_4:1667561-1667580 | Msa0663120:CDS | 65.0% | |
| ! | CGCCGCGGAGACGGTGTTTT+AGG | + | chr4_4:1667570-1667589 | Msa0663120:CDS | 65.0% |
| AGAGGGGTCCGGCTCAGTTG+AGG | + | chr4_4:1668249-1668268 | Msa0663120:CDS | 65.0% | |
| GAGGGGTCCGGCTCAGTTGA+GGG | + | chr4_4:1668250-1668269 | Msa0663120:CDS | 65.0% | |
| CCAGCCTGCAGATCCGTCAC+CGG | - | chr4_4:1668446-1668465 | None:intergenic | 65.0% | |
| CGTGAAGGGTCCGCCGGAAG+AGG | - | chr4_4:1667399-1667418 | None:intergenic | 70.0% | |
| TTCCGGCGGACCCTTCACGG+CGG | + | chr4_4:1667400-1667419 | Msa0663120:CDS | 70.0% | |
| CCGTGACCGGACTCTAGCGG+AGG | - | chr4_4:1667481-1667500 | None:intergenic | 70.0% | |
| TCCGCGGCGCTTAAACGCCG+CGG | + | chr4_4:1667555-1667574 | Msa0663120:CDS | 70.0% | |
| ! | TCCGCGGCGTTTAAGCGCCG+CGG | - | chr4_4:1667559-1667578 | None:intergenic | 70.0% |
| !! | CCGGTGACGGATCTGCAGGC+TGG | + | chr4_4:1668443-1668462 | Msa0663120:CDS | 70.0% |
| CGTGAAGGGTCCGCCGGAAG+AGG | - | chr4_4:1667399-1667418 | None:intergenic | 70.0% | |
| TTCCGGCGGACCCTTCACGG+CGG | + | chr4_4:1667400-1667419 | Msa0663120:CDS | 70.0% | |
| CCGTGACCGGACTCTAGCGG+AGG | - | chr4_4:1667481-1667500 | None:intergenic | 70.0% | |
| TCCGCGGCGCTTAAACGCCG+CGG | + | chr4_4:1667555-1667574 | Msa0663120:CDS | 70.0% | |
| ! | TCCGCGGCGTTTAAGCGCCG+CGG | - | chr4_4:1667559-1667578 | None:intergenic | 70.0% |
| !! | CCGGTGACGGATCTGCAGGC+TGG | + | chr4_4:1668443-1668462 | Msa0663120:CDS | 70.0% |
| GACCGCCGTGAAGGGTCCGC+CGG | - | chr4_4:1667405-1667424 | None:intergenic | 75.0% | |
| GACCGCCGTGAAGGGTCCGC+CGG | - | chr4_4:1667405-1667424 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 1667207 | 1668529 | 1667207 | ID=Msa0663120;Name=Msa0663120 |
| chr4_4 | mRNA | 1667207 | 1668529 | 1667207 | ID=Msa0663120-mRNA-1;Parent=Msa0663120;Name=Msa0663120-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|440 |
| chr4_4 | exon | 1667207 | 1668529 | 1667207 | ID=Msa0663120-mRNA-1:exon:442;Parent=Msa0663120-mRNA-1 |
| chr4_4 | CDS | 1667207 | 1668529 | 1667207 | ID=Msa0663120-mRNA-1:cds;Parent=Msa0663120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
