Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219210 | XP_003596846.1 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 1.83e-153 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219210 | sp|G7IHF9|CASP4_MEDTR | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 2.29e-156 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219210 | A0A396JB04 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 8.74e-154 | 434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004580 | Msa0219210 | 0.851165 | 1.060240e-60 | -8.615850e-47 |
| Msa0004590 | Msa0219210 | 0.804235 | 2.381569e-49 | -8.615850e-47 |
| Msa0024280 | Msa0219210 | 0.826567 | 2.527872e-54 | -8.615850e-47 |
| Msa0024290 | Msa0219210 | 0.808910 | 2.455797e-50 | -8.615850e-47 |
| Msa0032130 | Msa0219210 | 0.803529 | 3.337995e-49 | -8.615850e-47 |
| Msa0048950 | Msa0219210 | 0.867624 | 1.192955e-65 | -8.615850e-47 |
| Msa0057870 | Msa0219210 | 0.823672 | 1.221248e-53 | -8.615850e-47 |
| Msa0059880 | Msa0219210 | 0.867060 | 1.807652e-65 | -8.615850e-47 |
| Msa0072030 | Msa0219210 | 0.831854 | 1.318575e-55 | -8.615850e-47 |
| Msa0074620 | Msa0219210 | 0.815116 | 1.090307e-51 | -8.615850e-47 |
| Msa0084150 | Msa0219210 | 0.817655 | 2.945780e-52 | -8.615850e-47 |
| Msa0084160 | Msa0219210 | 0.809686 | 1.674174e-50 | -8.615850e-47 |
| Msa0102930 | Msa0219210 | 0.841210 | 5.454787e-58 | -8.615850e-47 |
| Msa0104390 | Msa0219210 | -0.800684 | 1.283915e-48 | -8.615850e-47 |
| Msa0106130 | Msa0219210 | 0.801075 | 1.068183e-48 | -8.615850e-47 |
| Msa0112640 | Msa0219210 | 0.801508 | 8.710706e-49 | -8.615850e-47 |
| Msa0120050 | Msa0219210 | 0.826163 | 3.154145e-54 | -8.615850e-47 |
| Msa0120070 | Msa0219210 | 0.829475 | 5.042471e-55 | -8.615850e-47 |
| Msa0131460 | Msa0219210 | 0.808745 | 2.663646e-50 | -8.615850e-47 |
| Msa0139720 | Msa0219210 | 0.804242 | 2.372699e-49 | -8.615850e-47 |
| Msa0140270 | Msa0219210 | 0.802765 | 4.802961e-49 | -8.615850e-47 |
| Msa0143680 | Msa0219210 | 0.809040 | 2.303339e-50 | -8.615850e-47 |
| Msa0143710 | Msa0219210 | 0.819136 | 1.360998e-52 | -8.615850e-47 |
| Msa0143740 | Msa0219210 | 0.809586 | 1.758635e-50 | -8.615850e-47 |
| Msa0143770 | Msa0219210 | 0.815477 | 9.062862e-52 | -8.615850e-47 |
| Msa0147670 | Msa0219210 | 0.863315 | 2.717187e-64 | -8.615850e-47 |
| Msa0147680 | Msa0219210 | 0.812070 | 5.101890e-51 | -8.615850e-47 |
| Msa0150910 | Msa0219210 | 0.844062 | 9.538748e-59 | -8.615850e-47 |
| Msa0163340 | Msa0219210 | 0.846654 | 1.896541e-59 | -8.615850e-47 |
| Msa0163370 | Msa0219210 | 0.823808 | 1.134584e-53 | -8.615850e-47 |
| Msa0170990 | Msa0219210 | 0.821694 | 3.522675e-53 | -8.615850e-47 |
| Msa0174600 | Msa0219210 | 0.812809 | 3.516989e-51 | -8.615850e-47 |
| Msa0197750 | Msa0219210 | 0.827855 | 1.242307e-54 | -8.615850e-47 |
| Msa0212490 | Msa0219210 | 0.822485 | 2.310495e-53 | -8.615850e-47 |
| Msa0219210 | Msa0223880 | 0.807754 | 4.330953e-50 | -8.615850e-47 |
| Msa0219210 | Msa0235080 | 0.803741 | 3.016777e-49 | -8.615850e-47 |
| Msa0219210 | Msa0252880 | 0.816422 | 5.575735e-52 | -8.615850e-47 |
| Msa0219210 | Msa0259300 | 0.809985 | 1.443144e-50 | -8.615850e-47 |
| Msa0219210 | Msa0265060 | 0.803242 | 3.828324e-49 | -8.615850e-47 |
| Msa0219210 | Msa0274260 | 0.804505 | 2.091507e-49 | -8.615850e-47 |
| Msa0219210 | Msa0277280 | 0.817578 | 3.065848e-52 | -8.615850e-47 |
| Msa0219210 | Msa0291750 | 0.802171 | 6.368544e-49 | -8.615850e-47 |
| Msa0219210 | Msa0298270 | 0.915334 | 6.663120e-85 | -8.615850e-47 |
| Msa0219210 | Msa0329650 | 0.811788 | 5.875643e-51 | -8.615850e-47 |
| Msa0219210 | Msa0336070 | 0.848837 | 4.750109e-60 | -8.615850e-47 |
| Msa0219210 | Msa0336520 | 0.807323 | 5.346838e-50 | -8.615850e-47 |
| Msa0219210 | Msa0336630 | 0.869158 | 3.817102e-66 | -8.615850e-47 |
| Msa0219210 | Msa0340650 | 0.808787 | 2.609065e-50 | -8.615850e-47 |
| Msa0219210 | Msa0366510 | 0.813413 | 2.591820e-51 | -8.615850e-47 |
| Msa0219210 | Msa0374130 | 0.820417 | 6.935907e-53 | -8.615850e-47 |
| Msa0219210 | Msa0444200 | 0.822541 | 2.241855e-53 | -8.615850e-47 |
| Msa0219210 | Msa0469550 | 0.845243 | 4.586538e-59 | -8.615850e-47 |
| Msa0219210 | Msa0491760 | 0.840671 | 7.558203e-58 | -8.615850e-47 |
| Msa0219210 | Msa0491770 | 0.807696 | 4.455490e-50 | -8.615850e-47 |
| Msa0219210 | Msa0515260 | 0.849116 | 3.975349e-60 | -8.615850e-47 |
| Msa0219210 | Msa0531030 | 0.803726 | 3.038163e-49 | -8.615850e-47 |
| Msa0219210 | Msa0531080 | 0.805748 | 1.149460e-49 | -8.615850e-47 |
| Msa0219210 | Msa0535570 | 0.818907 | 1.534448e-52 | -8.615850e-47 |
| Msa0219210 | Msa0543740 | 0.821672 | 3.565914e-53 | -8.615850e-47 |
| Msa0219210 | Msa0547200 | 0.807680 | 4.490301e-50 | -8.615850e-47 |
| Msa0219210 | Msa0548970 | 0.826077 | 3.305362e-54 | -8.615850e-47 |
| Msa0219210 | Msa0584970 | 0.804090 | 2.552125e-49 | -8.615850e-47 |
| Msa0219210 | Msa0587920 | 0.815343 | 9.704063e-52 | -8.615850e-47 |
| Msa0219210 | Msa0591490 | 0.800108 | 1.681935e-48 | -8.615850e-47 |
| Msa0219210 | Msa0599600 | 0.839413 | 1.608773e-57 | -8.615850e-47 |
| Msa0219210 | Msa0601920 | 0.825226 | 5.261551e-54 | -8.615850e-47 |
| Msa0219210 | Msa0602050 | 0.812073 | 5.093529e-51 | -8.615850e-47 |
| Msa0219210 | Msa0603950 | 0.841495 | 4.591167e-58 | -8.615850e-47 |
| Msa0219210 | Msa0605410 | 0.804512 | 2.084563e-49 | -8.615850e-47 |
| Msa0219210 | Msa0605460 | 0.822881 | 1.868574e-53 | -8.615850e-47 |
| Msa0219210 | Msa0605470 | 0.856036 | 4.219780e-62 | -8.615850e-47 |
| Msa0219210 | Msa0623310 | 0.820746 | 5.826659e-53 | -8.615850e-47 |
| Msa0219210 | Msa0623980 | 0.817990 | 2.475195e-52 | -8.615850e-47 |
| Msa0219210 | Msa0624050 | 0.807251 | 5.538268e-50 | -8.615850e-47 |
| Msa0219210 | Msa0631700 | 0.822128 | 2.796148e-53 | -8.615850e-47 |
| Msa0219210 | Msa0640290 | 0.820979 | 5.150745e-53 | -8.615850e-47 |
| Msa0219210 | Msa0643020 | 0.826770 | 2.260226e-54 | -8.615850e-47 |
| Msa0219210 | Msa0643840 | 0.802913 | 4.477739e-49 | -8.615850e-47 |
| Msa0219210 | Msa0646040 | 0.808502 | 3.001422e-50 | -8.615850e-47 |
| Msa0219210 | Msa0670360 | 0.822709 | 2.049114e-53 | -8.615850e-47 |
| Msa0219210 | Msa0676140 | 0.802838 | 4.639642e-49 | -8.615850e-47 |
| Msa0219210 | Msa0676190 | 0.823991 | 1.027968e-53 | -8.615850e-47 |
| Msa0219210 | Msa0678620 | 0.839438 | 1.584110e-57 | -8.615850e-47 |
| Msa0219210 | Msa0682730 | 0.833991 | 3.879443e-56 | -8.615850e-47 |
| Msa0219210 | Msa0684720 | 0.841535 | 4.480507e-58 | -8.615850e-47 |
| Msa0219210 | Msa0711240 | 0.810107 | 1.358590e-50 | -8.615850e-47 |
| Msa0219210 | Msa0727480 | 0.836391 | 9.618144e-57 | -8.615850e-47 |
| Msa0219210 | Msa0735280 | 0.855061 | 8.123093e-62 | -8.615850e-47 |
| Msa0219210 | Msa0768670 | 0.832071 | 1.165228e-55 | -8.615850e-47 |
| Msa0219210 | Msa0768720 | 0.832510 | 9.072805e-56 | -8.615850e-47 |
| Msa0219210 | Msa0777250 | 0.850003 | 2.248133e-60 | -8.615850e-47 |
| Msa0219210 | Msa0791300 | 0.832071 | 1.165052e-55 | -8.615850e-47 |
| Msa0219210 | Msa0796430 | 0.802819 | 4.680902e-49 | -8.615850e-47 |
| Msa0219210 | Msa0813840 | 0.800162 | 1.640259e-48 | -8.615850e-47 |
| Msa0219210 | Msa0814230 | 0.834562 | 2.789613e-56 | -8.615850e-47 |
| Msa0219210 | Msa0834270 | 0.813042 | 3.126440e-51 | -8.615850e-47 |
| Msa0219210 | Msa0854840 | 0.809456 | 1.875589e-50 | -8.615850e-47 |
| Msa0219210 | Msa0883640 | 0.856667 | 2.756115e-62 | -8.615850e-47 |
| Msa0219210 | Msa0893840 | 0.822413 | 2.400193e-53 | -8.615850e-47 |
| Msa0219210 | Msa0896920 | 0.810954 | 8.916048e-51 | -8.615850e-47 |
| Msa0219210 | Msa0902340 | 0.841784 | 3.850916e-58 | -8.615850e-47 |
| Msa0219210 | Msa0910830 | 0.860734 | 1.680268e-63 | -8.615850e-47 |
| Msa0219210 | Msa0913550 | 0.827466 | 1.540503e-54 | -8.615850e-47 |
| Msa0219210 | Msa0941120 | 0.832947 | 7.068523e-56 | -8.615850e-47 |
| Msa0219210 | Msa0951150 | 0.815112 | 1.092438e-51 | -8.615850e-47 |
| Msa0219210 | Msa0960090 | 0.858445 | 8.198883e-63 | -8.615850e-47 |
| Msa0219210 | Msa0962290 | 0.804540 | 2.057097e-49 | -8.615850e-47 |
| Msa0219210 | Msa0967820 | 0.805421 | 1.345779e-49 | -8.615850e-47 |
| Msa0219210 | Msa0971880 | 0.802228 | 6.197699e-49 | -8.615850e-47 |
| Msa0219210 | Msa0985700 | 0.857961 | 1.142249e-62 | -8.615850e-47 |
| Msa0219210 | Msa0987640 | 0.813526 | 2.448445e-51 | -8.615850e-47 |
| Msa0219210 | Msa0993450 | 0.824105 | 9.662993e-54 | -8.615850e-47 |
| Msa0219210 | Msa1003110 | 0.820687 | 6.012950e-53 | -8.615850e-47 |
| Msa0219210 | Msa1021620 | 0.836122 | 1.125609e-56 | -8.615850e-47 |
| Msa0219210 | Msa1022580 | 0.804160 | 2.468347e-49 | -8.615850e-47 |
| Msa0219210 | Msa1024350 | 0.816169 | 6.350999e-52 | -8.615850e-47 |
| Msa0219210 | Msa1026050 | 0.823225 | 1.553193e-53 | -8.615850e-47 |
| Msa0219210 | Msa1061670 | 0.839847 | 1.240253e-57 | -8.615850e-47 |
| Msa0219210 | Msa1076830 | 0.834048 | 3.753629e-56 | -8.615850e-47 |
| Msa0219210 | Msa1081610 | 0.802756 | 4.824392e-49 | -8.615850e-47 |
| Msa0219210 | Msa1087380 | 0.806761 | 7.030738e-50 | -8.615850e-47 |
| Msa0219210 | Msa1104960 | 0.819744 | 9.886960e-53 | -8.615850e-47 |
| Msa0219210 | Msa1106960 | 0.838039 | 3.642502e-57 | -8.615850e-47 |
| Msa0219210 | Msa1109880 | 0.831526 | 1.587663e-55 | -8.615850e-47 |
| Msa0219210 | Msa1109890 | 0.862604 | 4.504442e-64 | -8.615850e-47 |
| Msa0219210 | Msa1112730 | 0.807760 | 4.317604e-50 | -8.615850e-47 |
| Msa0219210 | Msa1132560 | 0.806206 | 9.204733e-50 | -8.615850e-47 |
| Msa0219210 | Msa1133860 | 0.815899 | 7.296093e-52 | -8.615850e-47 |
| Msa0219210 | Msa1149020 | 0.815529 | 8.822061e-52 | -8.615850e-47 |
| Msa0219210 | Msa1155630 | 0.807398 | 5.153408e-50 | -8.615850e-47 |
| Msa0219210 | Msa1182800 | -0.807854 | 4.124402e-50 | -8.615850e-47 |
| Msa0219210 | Msa1211390 | -0.802671 | 5.023084e-49 | -8.615850e-47 |
| Msa0219210 | Msa1214960 | 0.826622 | 2.452352e-54 | -8.615850e-47 |
| Msa0219210 | Msa1216600 | 0.834065 | 3.716926e-56 | -8.615850e-47 |
| Msa0219210 | Msa1233640 | 0.806528 | 7.874852e-50 | -8.615850e-47 |
| Msa0219210 | Msa1233650 | 0.811798 | 5.847153e-51 | -8.615850e-47 |
| Msa0219210 | Msa1237260 | -0.801015 | 1.099077e-48 | -8.615850e-47 |
| Msa0219210 | Msa1253270 | 0.807284 | 5.448297e-50 | -8.615850e-47 |
| Msa0219210 | Msa1269050 | 0.853020 | 3.148022e-61 | -8.615850e-47 |
| Msa0219210 | Msa1286420 | 0.820077 | 8.300030e-53 | -8.615850e-47 |
| Msa0219210 | Msa1296870 | 0.805321 | 1.412472e-49 | -8.615850e-47 |
| Msa0219210 | Msa1300610 | 0.824317 | 8.619009e-54 | -8.615850e-47 |
| Msa0219210 | Msa1314040 | 0.800708 | 1.269388e-48 | -8.615850e-47 |
| Msa0219210 | Msa1314710 | 0.830952 | 2.197306e-55 | -8.615850e-47 |
| Msa0219210 | Msa1319290 | 0.818889 | 1.548998e-52 | -8.615850e-47 |
| Msa0219210 | Msa1320530 | 0.811728 | 6.056494e-51 | -8.615850e-47 |
| Msa0219210 | Msa1323030 | 0.844881 | 5.743973e-59 | -8.615850e-47 |
| Msa0219210 | Msa1323120 | 0.834029 | 3.796107e-56 | -8.615850e-47 |
| Msa0219210 | Msa1323160 | 0.836087 | 1.149433e-56 | -8.615850e-47 |
| Msa0219210 | Msa1329740 | 0.823844 | 1.113135e-53 | -8.615850e-47 |
| Msa0219210 | Msa1357490 | 0.859328 | 4.463040e-63 | -8.615850e-47 |
| Msa0219210 | Msa1365850 | 0.813587 | 2.373243e-51 | -8.615850e-47 |
| Msa0219210 | Msa1370930 | 0.807355 | 5.263537e-50 | -8.615850e-47 |
| Msa0219210 | Msa1373560 | 0.823428 | 1.392339e-53 | -8.615850e-47 |
| Msa0219210 | Msa1376070 | 0.841906 | 3.576624e-58 | -8.615850e-47 |
| Msa0219210 | Msa1377520 | 0.837119 | 6.272541e-57 | -8.615850e-47 |
| Msa0219210 | Msa1378400 | 0.829801 | 4.199776e-55 | -8.615850e-47 |
| Msa0219210 | Msa1380490 | 0.834659 | 2.636925e-56 | -8.615850e-47 |
| Msa0219210 | Msa1386120 | 0.805443 | 1.331610e-49 | -8.615850e-47 |
| Msa0219210 | Msa1386260 | 0.822693 | 2.066634e-53 | -8.615850e-47 |
| Msa0219210 | Msa1393440 | 0.821548 | 3.808971e-53 | -8.615850e-47 |
| Msa0219210 | Msa1398490 | 0.800387 | 1.476086e-48 | -8.615850e-47 |
| Msa0219210 | Msa1407670 | 0.845505 | 3.896018e-59 | -8.615850e-47 |
| Msa0219210 | Msa1409060 | 0.806569 | 7.717136e-50 | -8.615850e-47 |
| Msa0219210 | Msa1411550 | 0.800304 | 1.534504e-48 | -8.615850e-47 |
| Msa0219210 | Msa1413090 | 0.804237 | 2.379038e-49 | -8.615850e-47 |
| Msa0219210 | Msa1417950 | 0.802174 | 6.357764e-49 | -8.615850e-47 |
| Msa0219210 | Msa1420020 | 0.972877 | 1.732207e-135 | -8.615850e-47 |
| Msa0219210 | Msa1421120 | 0.840609 | 7.841963e-58 | -8.615850e-47 |
| Msa0219210 | Msa1421130 | 0.813984 | 1.940971e-51 | -8.615850e-47 |
| Msa0219210 | Msa1426420 | 0.813986 | 1.938751e-51 | -8.615850e-47 |
| Msa0219210 | Msa1427670 | 0.805240 | 1.468489e-49 | -8.615850e-47 |
| Msa0219210 | Msa1445900 | 0.830656 | 2.596738e-55 | -8.615850e-47 |
| Msa0219210 | Msa1447790 | 0.817011 | 4.114092e-52 | -8.615850e-47 |
| Msa0219210 | Msa1447900 | 0.810033 | 1.409287e-50 | -8.615850e-47 |
| Msa0219210 | Msa1449770 | 0.848598 | 5.533397e-60 | -8.615850e-47 |
| Msa0219210 | Msa1459610 | 0.859717 | 3.410167e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219210 | MtrunA17_Chr2g0321671 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 1.68e-157 | 434 |
| Msa0219210 | MtrunA17_Chr1g0178161 | 59.064 | 171 | 70 | 0 | 49 | 219 | 25 | 195 | 3.24e-61 | 190 |
| Msa0219210 | MtrunA17_Chr1g0178181 | 59.538 | 173 | 70 | 0 | 47 | 219 | 22 | 194 | 1.60e-57 | 180 |
| Msa0219210 | MtrunA17_Chr1g0178191 | 56.725 | 171 | 74 | 0 | 49 | 219 | 23 | 193 | 2.58e-55 | 175 |
| Msa0219210 | MtrunA17_Chr7g0217691 | 48.276 | 174 | 90 | 0 | 46 | 219 | 12 | 185 | 1.11e-50 | 162 |
| Msa0219210 | MtrunA17_Chr4g0042551 | 43.243 | 185 | 99 | 1 | 42 | 220 | 33 | 217 | 9.46e-47 | 154 |
| Msa0219210 | MtrunA17_Chr5g0417761 | 43.590 | 195 | 100 | 1 | 26 | 220 | 2 | 186 | 3.23e-42 | 141 |
| Msa0219210 | MtrunA17_Chr7g0251531 | 33.094 | 139 | 90 | 2 | 65 | 202 | 33 | 169 | 2.95e-16 | 73.9 |
| Msa0219210 | MtrunA17_Chr4g0021111 | 34.899 | 149 | 84 | 4 | 55 | 201 | 1 | 138 | 4.77e-16 | 72.8 |
| Msa0219210 | MtrunA17_Chr7g0268681 | 28.877 | 187 | 115 | 5 | 24 | 206 | 3 | 175 | 3.41e-15 | 71.2 |
| Msa0219210 | MtrunA17_Chr3g0109681 | 28.141 | 199 | 103 | 5 | 40 | 216 | 7 | 187 | 2.60e-14 | 69.3 |
| Msa0219210 | MtrunA17_Chr2g0303151 | 29.565 | 115 | 81 | 0 | 99 | 213 | 71 | 185 | 3.78e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219210 | AT2G27370.1 | 49.091 | 220 | 103 | 4 | 3 | 220 | 8 | 220 | 3.69e-64 | 198 |
| Msa0219210 | AT2G36100.1 | 54.762 | 168 | 76 | 0 | 52 | 219 | 38 | 205 | 9.78e-59 | 184 |
| Msa0219210 | AT5G06200.1 | 60.479 | 167 | 66 | 0 | 53 | 219 | 35 | 201 | 4.06e-54 | 172 |
| Msa0219210 | AT5G15290.1 | 49.686 | 159 | 79 | 1 | 43 | 200 | 8 | 166 | 1.58e-51 | 165 |
| Msa0219210 | AT3G11550.1 | 59.880 | 167 | 67 | 0 | 53 | 219 | 37 | 203 | 7.10e-50 | 161 |
| Msa0219210 | AT1G14160.1 | 43.030 | 165 | 94 | 0 | 55 | 219 | 44 | 208 | 2.84e-42 | 142 |
| Msa0219210 | AT1G17200.1 | 29.193 | 161 | 105 | 3 | 58 | 217 | 29 | 181 | 2.83e-15 | 72.0 |
| Msa0219210 | AT3G06390.1 | 28.161 | 174 | 104 | 4 | 24 | 190 | 11 | 170 | 3.35e-15 | 71.6 |
| Msa0219210 | AT5G44550.1 | 30.247 | 162 | 101 | 4 | 66 | 219 | 22 | 179 | 6.08e-12 | 62.8 |
| Msa0219210 | AT1G03700.1 | 32.000 | 150 | 80 | 5 | 65 | 206 | 12 | 147 | 3.01e-11 | 60.1 |
| Msa0219210 | AT4G15610.1 | 27.545 | 167 | 117 | 2 | 40 | 202 | 7 | 173 | 5.45e-11 | 60.1 |
Find 48 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGTTCTCTTGGATTCT+AGG | 0.131201 | 2_1:-66714517 | None:intergenic |
| TCTTGGTGCTTCTGTCATTA+TGG | 0.177988 | 2_1:+66714694 | Msa0219210:CDS |
| TACCTAATTGCAGGTATTAA+TGG | 0.240857 | 2_1:+66715601 | Msa0219210:intron |
| TCCATTGCTTCTTGTTCTCT+TGG | 0.247900 | 2_1:-66714525 | None:intergenic |
| CTTGGTGCTTCTGTCATTAT+GGG | 0.276810 | 2_1:+66714695 | Msa0219210:CDS |
| AAATCTACTCCAATCCAAAA+AGG | 0.350579 | 2_1:+66714608 | Msa0219210:CDS |
| TCCTTCAGTTTCATGCTCAA+TGG | 0.391797 | 2_1:+66714753 | Msa0219210:CDS |
| CCTTCAGTTTCATGCTCAAT+GGG | 0.394063 | 2_1:+66714754 | Msa0219210:CDS |
| GGTGCCATTGGTGCTACTCT+TGG | 0.400369 | 2_1:+66714677 | Msa0219210:CDS |
| TGTTCTCTTGGATTCTAGGA+TGG | 0.406134 | 2_1:-66714513 | None:intergenic |
| GCAGGTATTAATGGCCTTAG+TGG | 0.406928 | 2_1:+66715610 | Msa0219210:intron |
| ACATGAACTTACTTAAACAT+TGG | 0.425523 | 2_1:-66714785 | None:intergenic |
| AGAACAAGAAGCAATGGAAA+AGG | 0.427010 | 2_1:+66714530 | Msa0219210:CDS |
| ACACCACAACCAAACAAGAT+AGG | 0.440488 | 2_1:-66715781 | None:intergenic |
| ATGGGAGTCAAGATGCAAAC+TGG | 0.445257 | 2_1:+66715678 | Msa0219210:CDS |
| GTTCTCTTGGATTCTAGGAT+GGG | 0.446748 | 2_1:-66714512 | None:intergenic |
| CTAAACATGCAGGTTCTTTG+TGG | 0.448810 | 2_1:+66715357 | Msa0219210:intron |
| GAACAAGAAGCAATGGAAAA+GGG | 0.449907 | 2_1:+66714531 | Msa0219210:CDS |
| ATTGTTAGACCCCTTGCAGC+TGG | 0.465698 | 2_1:+66715439 | Msa0219210:CDS |
| GGAAAAGGGAAATCCATTGA+TGG | 0.488181 | 2_1:+66714545 | Msa0219210:CDS |
| TTTCCTATCTTGTTTGGTTG+TGG | 0.489463 | 2_1:+66715778 | Msa0219210:CDS |
| CCAAGGTTCAAGTTTGGCTG+TGG | 0.491266 | 2_1:+66715733 | Msa0219210:CDS |
| GTGGCAAATGGAGCAGCAGC+TGG | 0.512854 | 2_1:+66715379 | Msa0219210:CDS |
| TTGTGTACTTAGCACACAAT+GGG | 0.520027 | 2_1:+66715660 | Msa0219210:CDS |
| TGTCTTCTGTAGCTCTCAAA+AGG | 0.525875 | 2_1:+66715801 | Msa0219210:CDS |
| AGGTTCTTTGTGGTGGCAAA+TGG | 0.527477 | 2_1:+66715367 | Msa0219210:intron |
| GACCCCTTGCAGCTGGTCCA+CGG | 0.529518 | 2_1:+66715446 | Msa0219210:CDS |
| TCCAAGAGAACAAGAAGCAA+TGG | 0.530743 | 2_1:+66714524 | Msa0219210:CDS |
| CCACAGCCAAACTTGAACCT+TGG | 0.532217 | 2_1:-66715733 | None:intergenic |
| AGGAGAATGATCTCCATCAA+TGG | 0.544643 | 2_1:-66714558 | None:intergenic |
| TGAAGCAGCTGCAACCACTA+AGG | 0.546688 | 2_1:-66715624 | None:intergenic |
| TGAAGGAACTGAGTAAAGAA+AGG | 0.555422 | 2_1:-66714737 | None:intergenic |
| AATCCGTGGACCAGCTGCAA+GGG | 0.560165 | 2_1:-66715449 | None:intergenic |
| AACATGCAGGTTCTTTGTGG+TGG | 0.566783 | 2_1:+66715360 | Msa0219210:intron |
| GGACTCAAGAAGAGAAGTTG+AGG | 0.570390 | 2_1:+66714475 | Msa0219210:CDS |
| GGTTGTTTCTTTCGTTGCGT+CGG | 0.570523 | 2_1:+66715754 | Msa0219210:CDS |
| TTGGTGCTTCTGTCATTATG+GGG | 0.574068 | 2_1:+66714696 | Msa0219210:CDS |
| GCAGACAATTGAGAATGGTA+AGG | 0.574191 | 2_1:-66715416 | None:intergenic |
| ACAATGCAGACAATTGAGAA+TGG | 0.577153 | 2_1:-66715421 | None:intergenic |
| CCCATTGAGCATGAAACTGA+AGG | 0.601992 | 2_1:-66714754 | None:intergenic |
| GAATCCGTGGACCAGCTGCA+AGG | 0.605753 | 2_1:-66715450 | None:intergenic |
| AGCACCAAGAGTAGCACCAA+TGG | 0.630653 | 2_1:-66714681 | None:intergenic |
| GTTGTGTACTTAGCACACAA+TGG | 0.633961 | 2_1:+66715659 | Msa0219210:CDS |
| ATCCGTGGACCAGCTGCAAG+GGG | 0.635198 | 2_1:-66715448 | None:intergenic |
| CAATTGAGAATGGTAAGGAG+AGG | 0.647713 | 2_1:-66715411 | None:intergenic |
| ACAACAGTTGCAGCATGTGG+AGG | 0.650553 | 2_1:-66714578 | None:intergenic |
| GTAACAACAGTTGCAGCATG+TGG | 0.663640 | 2_1:-66714581 | None:intergenic |
| ACGATGACAAGTAGAATCCG+TGG | 0.676654 | 2_1:-66715463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACAATTAATTGTATTTT+TGG | + | chr2_1:66714907-66714926 | Msa0219210:intron | 10.0% |
| !!! | TTTACAATTAATTGTATTTT+TGG | + | chr2_1:66714907-66714926 | Msa0219210:intron | 10.0% |
| !! | AAACAATAAATTTCAAGAAT+AGG | + | chr2_1:66715101-66715120 | Msa0219210:intron | 15.0% |
| !! | AAAAAAAAAATGTTCTTAGA+GGG | + | chr2_1:66715151-66715170 | Msa0219210:intron | 15.0% |
| !!! | TTTAAATATCATCCTTTTTA+TGG | + | chr2_1:66715332-66715351 | Msa0219210:intron | 15.0% |
| !! | AAACAATAAATTTCAAGAAT+AGG | + | chr2_1:66715101-66715120 | Msa0219210:intron | 15.0% |
| !! | AAAAAAAAAATGTTCTTAGA+GGG | + | chr2_1:66715151-66715170 | Msa0219210:intron | 15.0% |
| !!! | TTTAAATATCATCCTTTTTA+TGG | + | chr2_1:66715332-66715351 | Msa0219210:intron | 15.0% |
| !! | TAGTATTGTAAAGATCAAAT+GGG | - | chr2_1:66714827-66714846 | None:intergenic | 20.0% |
| !! | ATAGTATTGTAAAGATCAAA+TGG | - | chr2_1:66714828-66714847 | None:intergenic | 20.0% |
| !! | AATTGTGTTTCAGTTAAAAT+AGG | - | chr2_1:66714937-66714956 | None:intergenic | 20.0% |
| !!! | AGAAAAAAGTTTTGAAACAA+GGG | - | chr2_1:66714994-66715013 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAATGTTCTTAG+AGG | + | chr2_1:66715150-66715169 | Msa0219210:intron | 20.0% |
| !! | TAGTATTGTAAAGATCAAAT+GGG | - | chr2_1:66714827-66714846 | None:intergenic | 20.0% |
| !! | ATAGTATTGTAAAGATCAAA+TGG | - | chr2_1:66714828-66714847 | None:intergenic | 20.0% |
| !! | AATTGTGTTTCAGTTAAAAT+AGG | - | chr2_1:66714937-66714956 | None:intergenic | 20.0% |
| !!! | AGAAAAAAGTTTTGAAACAA+GGG | - | chr2_1:66714994-66715013 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAATGTTCTTAG+AGG | + | chr2_1:66715150-66715169 | Msa0219210:intron | 20.0% |
| !! | CAATCTTAGACTTCATTTTA+AGG | + | chr2_1:66714651-66714670 | Msa0219210:CDS | 25.0% |
| ! | ACATGAACTTACTTAAACAT+TGG | - | chr2_1:66714788-66714807 | None:intergenic | 25.0% |
| ! | AGTAAGTTCATGTTACATAA+CGG | + | chr2_1:66714795-66714814 | Msa0219210:intron | 25.0% |
| !!! | AACACTTTTTAAGAATGACT+TGG | + | chr2_1:66714876-66714895 | Msa0219210:intron | 25.0% |
| !!! | GAAAAAAGTTTTGAAACAAG+GGG | - | chr2_1:66714993-66715012 | None:intergenic | 25.0% |
| !!! | GAGAAAAAAGTTTTGAAACA+AGG | - | chr2_1:66714995-66715014 | None:intergenic | 25.0% |
| !!! | TTTTCTCACAACTTAATTTG+AGG | + | chr2_1:66715008-66715027 | Msa0219210:intron | 25.0% |
| ! | TTACATCCGATAAATGAAAT+CGG | + | chr2_1:66715125-66715144 | Msa0219210:intron | 25.0% |
| ! | TTTCTTCCGATTTCATTTAT+CGG | - | chr2_1:66715134-66715153 | None:intergenic | 25.0% |
| !! | CAATCTTAGACTTCATTTTA+AGG | + | chr2_1:66714651-66714670 | Msa0219210:CDS | 25.0% |
| ! | ACATGAACTTACTTAAACAT+TGG | - | chr2_1:66714788-66714807 | None:intergenic | 25.0% |
| ! | AGTAAGTTCATGTTACATAA+CGG | + | chr2_1:66714795-66714814 | Msa0219210:intron | 25.0% |
| !!! | AACACTTTTTAAGAATGACT+TGG | + | chr2_1:66714876-66714895 | Msa0219210:intron | 25.0% |
| !!! | GAAAAAAGTTTTGAAACAAG+GGG | - | chr2_1:66714993-66715012 | None:intergenic | 25.0% |
| !!! | GAGAAAAAAGTTTTGAAACA+AGG | - | chr2_1:66714995-66715014 | None:intergenic | 25.0% |
| !!! | TTTTCTCACAACTTAATTTG+AGG | + | chr2_1:66715008-66715027 | Msa0219210:intron | 25.0% |
| ! | TTACATCCGATAAATGAAAT+CGG | + | chr2_1:66715125-66715144 | Msa0219210:intron | 25.0% |
| ! | TTTCTTCCGATTTCATTTAT+CGG | - | chr2_1:66715134-66715153 | None:intergenic | 25.0% |
| AAATCTACTCCAATCCAAAA+AGG | + | chr2_1:66714608-66714627 | Msa0219210:CDS | 30.0% | |
| CAAAAAGGTGGAATGAAAAA+GGG | + | chr2_1:66714623-66714642 | Msa0219210:CDS | 30.0% | |
| !!! | TTAGACTTCATTTTAAGGCT+TGG | + | chr2_1:66714656-66714675 | Msa0219210:CDS | 30.0% |
| TGTGTTTCAGTTAAAATAGG+AGG | - | chr2_1:66714934-66714953 | None:intergenic | 30.0% | |
| AACATGTCACGTCATAAAAT+AGG | - | chr2_1:66715037-66715056 | None:intergenic | 30.0% | |
| !! | ACGATATGAGAGTGTTTATT+TGG | - | chr2_1:66715183-66715202 | None:intergenic | 30.0% |
| !!! | TAAACAATGTTTTGATGACG+TGG | - | chr2_1:66715216-66715235 | None:intergenic | 30.0% |
| GCATGTTTAGATCCATAAAA+AGG | - | chr2_1:66715347-66715366 | None:intergenic | 30.0% | |
| ! | TTTTATGGATCTAAACATGC+AGG | + | chr2_1:66715347-66715366 | Msa0219210:intron | 30.0% |
| TACCTAATTGCAGGTATTAA+TGG | + | chr2_1:66715601-66715620 | Msa0219210:intron | 30.0% | |
| AAATCTACTCCAATCCAAAA+AGG | + | chr2_1:66714608-66714627 | Msa0219210:CDS | 30.0% | |
| CAAAAAGGTGGAATGAAAAA+GGG | + | chr2_1:66714623-66714642 | Msa0219210:CDS | 30.0% | |
| !!! | TTAGACTTCATTTTAAGGCT+TGG | + | chr2_1:66714656-66714675 | Msa0219210:CDS | 30.0% |
| TGTGTTTCAGTTAAAATAGG+AGG | - | chr2_1:66714934-66714953 | None:intergenic | 30.0% | |
| AACATGTCACGTCATAAAAT+AGG | - | chr2_1:66715037-66715056 | None:intergenic | 30.0% | |
| !! | ACGATATGAGAGTGTTTATT+TGG | - | chr2_1:66715183-66715202 | None:intergenic | 30.0% |
| !!! | TAAACAATGTTTTGATGACG+TGG | - | chr2_1:66715216-66715235 | None:intergenic | 30.0% |
| GCATGTTTAGATCCATAAAA+AGG | - | chr2_1:66715347-66715366 | None:intergenic | 30.0% | |
| ! | TTTTATGGATCTAAACATGC+AGG | + | chr2_1:66715347-66715366 | Msa0219210:intron | 30.0% |
| TACCTAATTGCAGGTATTAA+TGG | + | chr2_1:66715601-66715620 | Msa0219210:intron | 30.0% | |
| TTCTTGTTCTCTTGGATTCT+AGG | - | chr2_1:66714520-66714539 | None:intergenic | 35.0% | |
| AGAACAAGAAGCAATGGAAA+AGG | + | chr2_1:66714530-66714549 | Msa0219210:CDS | 35.0% | |
| GAACAAGAAGCAATGGAAAA+GGG | + | chr2_1:66714531-66714550 | Msa0219210:CDS | 35.0% | |
| ! | TTCATTCCACCTTTTTGGAT+TGG | - | chr2_1:66714620-66714639 | None:intergenic | 35.0% |
| !! | CCTTTTTCATTCCACCTTTT+TGG | - | chr2_1:66714625-66714644 | None:intergenic | 35.0% |
| CCAAAAAGGTGGAATGAAAA+AGG | + | chr2_1:66714622-66714641 | Msa0219210:CDS | 35.0% | |
| TGAAGGAACTGAGTAAAGAA+AGG | - | chr2_1:66714740-66714759 | None:intergenic | 35.0% | |
| CGAAATTGCAAGGATATGAA+GGG | - | chr2_1:66715288-66715307 | None:intergenic | 35.0% | |
| ACAATGCAGACAATTGAGAA+TGG | - | chr2_1:66715424-66715443 | None:intergenic | 35.0% | |
| TTGTGTACTTAGCACACAAT+GGG | + | chr2_1:66715660-66715679 | Msa0219210:CDS | 35.0% | |
| !! | TTTTTGCCAAGGTTCAAGTT+TGG | + | chr2_1:66715727-66715746 | Msa0219210:CDS | 35.0% |
| ! | TTTCCTATCTTGTTTGGTTG+TGG | + | chr2_1:66715778-66715797 | Msa0219210:CDS | 35.0% |
| TTCTTGTTCTCTTGGATTCT+AGG | - | chr2_1:66714520-66714539 | None:intergenic | 35.0% | |
| AGAACAAGAAGCAATGGAAA+AGG | + | chr2_1:66714530-66714549 | Msa0219210:CDS | 35.0% | |
| GAACAAGAAGCAATGGAAAA+GGG | + | chr2_1:66714531-66714550 | Msa0219210:CDS | 35.0% | |
| ! | TTCATTCCACCTTTTTGGAT+TGG | - | chr2_1:66714620-66714639 | None:intergenic | 35.0% |
| !! | CCTTTTTCATTCCACCTTTT+TGG | - | chr2_1:66714625-66714644 | None:intergenic | 35.0% |
| CCAAAAAGGTGGAATGAAAA+AGG | + | chr2_1:66714622-66714641 | Msa0219210:CDS | 35.0% | |
| TGAAGGAACTGAGTAAAGAA+AGG | - | chr2_1:66714740-66714759 | None:intergenic | 35.0% | |
| CGAAATTGCAAGGATATGAA+GGG | - | chr2_1:66715288-66715307 | None:intergenic | 35.0% | |
| ACAATGCAGACAATTGAGAA+TGG | - | chr2_1:66715424-66715443 | None:intergenic | 35.0% | |
| TTGTGTACTTAGCACACAAT+GGG | + | chr2_1:66715660-66715679 | Msa0219210:CDS | 35.0% | |
| !! | TTTTTGCCAAGGTTCAAGTT+TGG | + | chr2_1:66715727-66715746 | Msa0219210:CDS | 35.0% |
| ! | TTTCCTATCTTGTTTGGTTG+TGG | + | chr2_1:66715778-66715797 | Msa0219210:CDS | 35.0% |
| !! | GTTCTCTTGGATTCTAGGAT+GGG | - | chr2_1:66714515-66714534 | None:intergenic | 40.0% |
| ! | TGTTCTCTTGGATTCTAGGA+TGG | - | chr2_1:66714516-66714535 | None:intergenic | 40.0% |
| TCCAAGAGAACAAGAAGCAA+TGG | + | chr2_1:66714524-66714543 | Msa0219210:CDS | 40.0% | |
| TCCATTGCTTCTTGTTCTCT+TGG | - | chr2_1:66714528-66714547 | None:intergenic | 40.0% | |
| GGAAAAGGGAAATCCATTGA+TGG | + | chr2_1:66714545-66714564 | Msa0219210:CDS | 40.0% | |
| AGGAGAATGATCTCCATCAA+TGG | - | chr2_1:66714561-66714580 | None:intergenic | 40.0% | |
| TCTACTCCAATCCAAAAAGG+TGG | + | chr2_1:66714611-66714630 | Msa0219210:CDS | 40.0% | |
| !!! | ATTTTAAGGCTTGGTGCCAT+TGG | + | chr2_1:66714665-66714684 | Msa0219210:CDS | 40.0% |
| !! | TCTTGGTGCTTCTGTCATTA+TGG | + | chr2_1:66714694-66714713 | Msa0219210:CDS | 40.0% |
| !! | CTTGGTGCTTCTGTCATTAT+GGG | + | chr2_1:66714695-66714714 | Msa0219210:CDS | 40.0% |
| ! | TTGGTGCTTCTGTCATTATG+GGG | + | chr2_1:66714696-66714715 | Msa0219210:CDS | 40.0% |
| TCCTTCAGTTTCATGCTCAA+TGG | + | chr2_1:66714753-66714772 | Msa0219210:CDS | 40.0% | |
| CCTTCAGTTTCATGCTCAAT+GGG | + | chr2_1:66714754-66714773 | Msa0219210:CDS | 40.0% | |
| AATTGCAAGGATATGAAGGG+AGG | - | chr2_1:66715285-66715304 | None:intergenic | 40.0% | |
| GCGAAATTGCAAGGATATGA+AGG | - | chr2_1:66715289-66715308 | None:intergenic | 40.0% | |
| CTATAGCAAGTAAAGATGCC+AGG | - | chr2_1:66715311-66715330 | None:intergenic | 40.0% | |
| CTAAACATGCAGGTTCTTTG+TGG | + | chr2_1:66715357-66715376 | Msa0219210:intron | 40.0% | |
| CAATTGAGAATGGTAAGGAG+AGG | - | chr2_1:66715414-66715433 | None:intergenic | 40.0% | |
| GCAGACAATTGAGAATGGTA+AGG | - | chr2_1:66715419-66715438 | None:intergenic | 40.0% | |
| AATGTTCGCTACCTAATTGC+AGG | + | chr2_1:66715592-66715611 | Msa0219210:intron | 40.0% | |
| GGCCATTAATACCTGCAATT+AGG | - | chr2_1:66715606-66715625 | None:intergenic | 40.0% | |
| GTTGTGTACTTAGCACACAA+TGG | + | chr2_1:66715659-66715678 | Msa0219210:CDS | 40.0% | |
| !!! | CAGTTCACTGATTTTTGCCA+AGG | + | chr2_1:66715716-66715735 | Msa0219210:CDS | 40.0% |
| !! | GTCGGTTTTCCTATCTTGTT+TGG | + | chr2_1:66715772-66715791 | Msa0219210:CDS | 40.0% |
| ACACCACAACCAAACAAGAT+AGG | - | chr2_1:66715784-66715803 | None:intergenic | 40.0% | |
| TGTCTTCTGTAGCTCTCAAA+AGG | + | chr2_1:66715801-66715820 | Msa0219210:CDS | 40.0% | |
| !! | GTTCTCTTGGATTCTAGGAT+GGG | - | chr2_1:66714515-66714534 | None:intergenic | 40.0% |
| ! | TGTTCTCTTGGATTCTAGGA+TGG | - | chr2_1:66714516-66714535 | None:intergenic | 40.0% |
| TCCAAGAGAACAAGAAGCAA+TGG | + | chr2_1:66714524-66714543 | Msa0219210:CDS | 40.0% | |
| TCCATTGCTTCTTGTTCTCT+TGG | - | chr2_1:66714528-66714547 | None:intergenic | 40.0% | |
| GGAAAAGGGAAATCCATTGA+TGG | + | chr2_1:66714545-66714564 | Msa0219210:CDS | 40.0% | |
| AGGAGAATGATCTCCATCAA+TGG | - | chr2_1:66714561-66714580 | None:intergenic | 40.0% | |
| TCTACTCCAATCCAAAAAGG+TGG | + | chr2_1:66714611-66714630 | Msa0219210:CDS | 40.0% | |
| !!! | ATTTTAAGGCTTGGTGCCAT+TGG | + | chr2_1:66714665-66714684 | Msa0219210:CDS | 40.0% |
| !! | TCTTGGTGCTTCTGTCATTA+TGG | + | chr2_1:66714694-66714713 | Msa0219210:CDS | 40.0% |
| !! | CTTGGTGCTTCTGTCATTAT+GGG | + | chr2_1:66714695-66714714 | Msa0219210:CDS | 40.0% |
| ! | TTGGTGCTTCTGTCATTATG+GGG | + | chr2_1:66714696-66714715 | Msa0219210:CDS | 40.0% |
| TCCTTCAGTTTCATGCTCAA+TGG | + | chr2_1:66714753-66714772 | Msa0219210:CDS | 40.0% | |
| CCTTCAGTTTCATGCTCAAT+GGG | + | chr2_1:66714754-66714773 | Msa0219210:CDS | 40.0% | |
| AATTGCAAGGATATGAAGGG+AGG | - | chr2_1:66715285-66715304 | None:intergenic | 40.0% | |
| GCGAAATTGCAAGGATATGA+AGG | - | chr2_1:66715289-66715308 | None:intergenic | 40.0% | |
| CTATAGCAAGTAAAGATGCC+AGG | - | chr2_1:66715311-66715330 | None:intergenic | 40.0% | |
| CTAAACATGCAGGTTCTTTG+TGG | + | chr2_1:66715357-66715376 | Msa0219210:intron | 40.0% | |
| CAATTGAGAATGGTAAGGAG+AGG | - | chr2_1:66715414-66715433 | None:intergenic | 40.0% | |
| GCAGACAATTGAGAATGGTA+AGG | - | chr2_1:66715419-66715438 | None:intergenic | 40.0% | |
| AATGTTCGCTACCTAATTGC+AGG | + | chr2_1:66715592-66715611 | Msa0219210:intron | 40.0% | |
| GGCCATTAATACCTGCAATT+AGG | - | chr2_1:66715606-66715625 | None:intergenic | 40.0% | |
| GTTGTGTACTTAGCACACAA+TGG | + | chr2_1:66715659-66715678 | Msa0219210:CDS | 40.0% | |
| !!! | CAGTTCACTGATTTTTGCCA+AGG | + | chr2_1:66715716-66715735 | Msa0219210:CDS | 40.0% |
| !! | GTCGGTTTTCCTATCTTGTT+TGG | + | chr2_1:66715772-66715791 | Msa0219210:CDS | 40.0% |
| ACACCACAACCAAACAAGAT+AGG | - | chr2_1:66715784-66715803 | None:intergenic | 40.0% | |
| TGTCTTCTGTAGCTCTCAAA+AGG | + | chr2_1:66715801-66715820 | Msa0219210:CDS | 40.0% | |
| GGACTCAAGAAGAGAAGTTG+AGG | + | chr2_1:66714475-66714494 | Msa0219210:CDS | 45.0% | |
| GTAACAACAGTTGCAGCATG+TGG | - | chr2_1:66714584-66714603 | None:intergenic | 45.0% | |
| CCCATTGAGCATGAAACTGA+AGG | - | chr2_1:66714757-66714776 | None:intergenic | 45.0% | |
| CATATCCTTGCAATTTCGCC+TGG | + | chr2_1:66715290-66715309 | Msa0219210:intron | 45.0% | |
| AACATGCAGGTTCTTTGTGG+TGG | + | chr2_1:66715360-66715379 | Msa0219210:intron | 45.0% | |
| AGGTTCTTTGTGGTGGCAAA+TGG | + | chr2_1:66715367-66715386 | Msa0219210:intron | 45.0% | |
| ACGATGACAAGTAGAATCCG+TGG | - | chr2_1:66715466-66715485 | None:intergenic | 45.0% | |
| ! | GCAGGTATTAATGGCCTTAG+TGG | + | chr2_1:66715610-66715629 | Msa0219210:intron | 45.0% |
| ATGGGAGTCAAGATGCAAAC+TGG | + | chr2_1:66715678-66715697 | Msa0219210:CDS | 45.0% | |
| !! | GGTTGTTTCTTTCGTTGCGT+CGG | + | chr2_1:66715754-66715773 | Msa0219210:CDS | 45.0% |
| GGACTCAAGAAGAGAAGTTG+AGG | + | chr2_1:66714475-66714494 | Msa0219210:CDS | 45.0% | |
| GTAACAACAGTTGCAGCATG+TGG | - | chr2_1:66714584-66714603 | None:intergenic | 45.0% | |
| CCCATTGAGCATGAAACTGA+AGG | - | chr2_1:66714757-66714776 | None:intergenic | 45.0% | |
| CATATCCTTGCAATTTCGCC+TGG | + | chr2_1:66715290-66715309 | Msa0219210:intron | 45.0% | |
| AACATGCAGGTTCTTTGTGG+TGG | + | chr2_1:66715360-66715379 | Msa0219210:intron | 45.0% | |
| AGGTTCTTTGTGGTGGCAAA+TGG | + | chr2_1:66715367-66715386 | Msa0219210:intron | 45.0% | |
| ACGATGACAAGTAGAATCCG+TGG | - | chr2_1:66715466-66715485 | None:intergenic | 45.0% | |
| ! | GCAGGTATTAATGGCCTTAG+TGG | + | chr2_1:66715610-66715629 | Msa0219210:intron | 45.0% |
| ATGGGAGTCAAGATGCAAAC+TGG | + | chr2_1:66715678-66715697 | Msa0219210:CDS | 45.0% | |
| !! | GGTTGTTTCTTTCGTTGCGT+CGG | + | chr2_1:66715754-66715773 | Msa0219210:CDS | 45.0% |
| ACAACAGTTGCAGCATGTGG+AGG | - | chr2_1:66714581-66714600 | None:intergenic | 50.0% | |
| AGCACCAAGAGTAGCACCAA+TGG | - | chr2_1:66714684-66714703 | None:intergenic | 50.0% | |
| AGATGCCAGGCGAAATTGCA+AGG | - | chr2_1:66715298-66715317 | None:intergenic | 50.0% | |
| ATTGTTAGACCCCTTGCAGC+TGG | + | chr2_1:66715439-66715458 | Msa0219210:CDS | 50.0% | |
| TGAAGCAGCTGCAACCACTA+AGG | - | chr2_1:66715627-66715646 | None:intergenic | 50.0% | |
| CCACAGCCAAACTTGAACCT+TGG | - | chr2_1:66715736-66715755 | None:intergenic | 50.0% | |
| ! | CCAAGGTTCAAGTTTGGCTG+TGG | + | chr2_1:66715733-66715752 | Msa0219210:CDS | 50.0% |
| ACAACAGTTGCAGCATGTGG+AGG | - | chr2_1:66714581-66714600 | None:intergenic | 50.0% | |
| AGCACCAAGAGTAGCACCAA+TGG | - | chr2_1:66714684-66714703 | None:intergenic | 50.0% | |
| AGATGCCAGGCGAAATTGCA+AGG | - | chr2_1:66715298-66715317 | None:intergenic | 50.0% | |
| ATTGTTAGACCCCTTGCAGC+TGG | + | chr2_1:66715439-66715458 | Msa0219210:CDS | 50.0% | |
| TGAAGCAGCTGCAACCACTA+AGG | - | chr2_1:66715627-66715646 | None:intergenic | 50.0% | |
| CCACAGCCAAACTTGAACCT+TGG | - | chr2_1:66715736-66715755 | None:intergenic | 50.0% | |
| ! | CCAAGGTTCAAGTTTGGCTG+TGG | + | chr2_1:66715733-66715752 | Msa0219210:CDS | 50.0% |
| !! | GGTGCCATTGGTGCTACTCT+TGG | + | chr2_1:66714677-66714696 | Msa0219210:CDS | 55.0% |
| AATCCGTGGACCAGCTGCAA+GGG | - | chr2_1:66715452-66715471 | None:intergenic | 55.0% | |
| !! | GGTGCCATTGGTGCTACTCT+TGG | + | chr2_1:66714677-66714696 | Msa0219210:CDS | 55.0% |
| AATCCGTGGACCAGCTGCAA+GGG | - | chr2_1:66715452-66715471 | None:intergenic | 55.0% | |
| GTGGCAAATGGAGCAGCAGC+TGG | + | chr2_1:66715379-66715398 | Msa0219210:CDS | 60.0% | |
| ATCCGTGGACCAGCTGCAAG+GGG | - | chr2_1:66715451-66715470 | None:intergenic | 60.0% | |
| GAATCCGTGGACCAGCTGCA+AGG | - | chr2_1:66715453-66715472 | None:intergenic | 60.0% | |
| GTGGCAAATGGAGCAGCAGC+TGG | + | chr2_1:66715379-66715398 | Msa0219210:CDS | 60.0% | |
| ATCCGTGGACCAGCTGCAAG+GGG | - | chr2_1:66715451-66715470 | None:intergenic | 60.0% | |
| GAATCCGTGGACCAGCTGCA+AGG | - | chr2_1:66715453-66715472 | None:intergenic | 60.0% | |
| GACCCCTTGCAGCTGGTCCA+CGG | + | chr2_1:66715446-66715465 | Msa0219210:CDS | 65.0% | |
| GACCCCTTGCAGCTGGTCCA+CGG | + | chr2_1:66715446-66715465 | Msa0219210:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 66714473 | 66715829 | 66714473 | ID=Msa0219210;Name=Msa0219210 |
| chr2_1 | mRNA | 66714473 | 66715829 | 66714473 | ID=Msa0219210-mRNA-1;Parent=Msa0219210;Name=Msa0219210-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|220 |
| chr2_1 | exon | 66714473 | 66714795 | 66714473 | ID=Msa0219210-mRNA-1:exon:18820;Parent=Msa0219210-mRNA-1 |
| chr2_1 | exon | 66715369 | 66715492 | 66715369 | ID=Msa0219210-mRNA-1:exon:18821;Parent=Msa0219210-mRNA-1 |
| chr2_1 | exon | 66715614 | 66715829 | 66715614 | ID=Msa0219210-mRNA-1:exon:18822;Parent=Msa0219210-mRNA-1 |
| chr2_1 | CDS | 66714473 | 66714795 | 66714473 | ID=Msa0219210-mRNA-1:cds;Parent=Msa0219210-mRNA-1 |
| chr2_1 | CDS | 66715369 | 66715492 | 66715369 | ID=Msa0219210-mRNA-1:cds;Parent=Msa0219210-mRNA-1 |
| chr2_1 | CDS | 66715614 | 66715829 | 66715614 | ID=Msa0219210-mRNA-1:cds;Parent=Msa0219210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
