Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374130 | XP_003601984.1 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 5.42e-116 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374130 | sp|Q9LX15|DFC_ARATH | 46.914 | 162 | 81 | 3 | 1 | 159 | 1 | 160 | 6.73e-45 | 147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374130 | G7J4B2 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 2.59e-116 | 335 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004580 | Msa0374130 | 0.823357 | 1.447030e-53 | -8.615850e-47 |
| Msa0004590 | Msa0374130 | 0.818601 | 1.800387e-52 | -8.615850e-47 |
| Msa0012790 | Msa0374130 | 0.803643 | 3.161499e-49 | -8.615850e-47 |
| Msa0012820 | Msa0374130 | 0.828347 | 9.455352e-55 | -8.615850e-47 |
| Msa0024280 | Msa0374130 | 0.816052 | 6.745388e-52 | -8.615850e-47 |
| Msa0036580 | Msa0374130 | 0.812469 | 4.174927e-51 | -8.615850e-47 |
| Msa0048950 | Msa0374130 | 0.880524 | 5.113664e-70 | -8.615850e-47 |
| Msa0059880 | Msa0374130 | 0.863991 | 1.675826e-64 | -8.615850e-47 |
| Msa0061590 | Msa0374130 | 0.804221 | 2.397236e-49 | -8.615850e-47 |
| Msa0061600 | Msa0374130 | 0.826088 | 3.285986e-54 | -8.615850e-47 |
| Msa0072030 | Msa0374130 | 0.847084 | 1.446668e-59 | -8.615850e-47 |
| Msa0102920 | Msa0374130 | 0.812312 | 4.516931e-51 | -8.615850e-47 |
| Msa0102930 | Msa0374130 | 0.807108 | 5.938792e-50 | -8.615850e-47 |
| Msa0106110 | Msa0374130 | 0.801269 | 9.751659e-49 | -8.615850e-47 |
| Msa0106120 | Msa0374130 | 0.825624 | 4.235758e-54 | -8.615850e-47 |
| Msa0106130 | Msa0374130 | 0.830279 | 3.212139e-55 | -8.615850e-47 |
| Msa0120050 | Msa0374130 | 0.830089 | 3.573181e-55 | -8.615850e-47 |
| Msa0120070 | Msa0374130 | 0.805915 | 1.059865e-49 | -8.615850e-47 |
| Msa0131460 | Msa0374130 | 0.840393 | 8.933890e-58 | -8.615850e-47 |
| Msa0139270 | Msa0374130 | 0.803752 | 3.000196e-49 | -8.615850e-47 |
| Msa0139460 | Msa0374130 | 0.819965 | 8.802013e-53 | -8.615850e-47 |
| Msa0140270 | Msa0374130 | 0.816234 | 6.141768e-52 | -8.615850e-47 |
| Msa0143680 | Msa0374130 | 0.809060 | 2.279976e-50 | -8.615850e-47 |
| Msa0143710 | Msa0374130 | 0.818624 | 1.778439e-52 | -8.615850e-47 |
| Msa0143740 | Msa0374130 | 0.813657 | 2.291139e-51 | -8.615850e-47 |
| Msa0143770 | Msa0374130 | 0.816503 | 5.348247e-52 | -8.615850e-47 |
| Msa0147670 | Msa0374130 | 0.837759 | 4.300463e-57 | -8.615850e-47 |
| Msa0147680 | Msa0374130 | 0.823086 | 1.673550e-53 | -8.615850e-47 |
| Msa0150910 | Msa0374130 | 0.853744 | 1.951314e-61 | -8.615850e-47 |
| Msa0152660 | Msa0374130 | 0.801052 | 1.079862e-48 | -8.615850e-47 |
| Msa0152740 | Msa0374130 | 0.823619 | 1.256196e-53 | -8.615850e-47 |
| Msa0163340 | Msa0374130 | 0.825428 | 4.713846e-54 | -8.615850e-47 |
| Msa0163370 | Msa0374130 | 0.807653 | 4.549578e-50 | -8.615850e-47 |
| Msa0176620 | Msa0374130 | 0.816734 | 4.746265e-52 | -8.615850e-47 |
| Msa0177260 | Msa0374130 | 0.803457 | 3.454070e-49 | -8.615850e-47 |
| Msa0190670 | Msa0374130 | 0.803848 | 2.865393e-49 | -8.615850e-47 |
| Msa0190890 | Msa0374130 | 0.820511 | 6.600478e-53 | -8.615850e-47 |
| Msa0197750 | Msa0374130 | 0.827440 | 1.562955e-54 | -8.615850e-47 |
| Msa0210790 | Msa0374130 | 0.804998 | 1.650416e-49 | -8.615850e-47 |
| Msa0210850 | Msa0374130 | 0.819706 | 1.008939e-52 | -8.615850e-47 |
| Msa0212490 | Msa0374130 | 0.814446 | 1.534030e-51 | -8.615850e-47 |
| Msa0216760 | Msa0374130 | 0.815517 | 8.877103e-52 | -8.615850e-47 |
| Msa0219210 | Msa0374130 | 0.820417 | 6.935907e-53 | -8.615850e-47 |
| Msa0223880 | Msa0374130 | 0.823556 | 1.299973e-53 | -8.615850e-47 |
| Msa0225910 | Msa0374130 | 0.804160 | 2.468156e-49 | -8.615850e-47 |
| Msa0226410 | Msa0374130 | 0.821542 | 3.821259e-53 | -8.615850e-47 |
| Msa0374130 | Msa0414480 | 0.810023 | 1.416263e-50 | -8.615850e-47 |
| Msa0374130 | Msa0469550 | 0.930876 | 8.642046e-94 | -8.615850e-47 |
| Msa0374130 | Msa0470370 | 0.802510 | 5.421490e-49 | -8.615850e-47 |
| Msa0374130 | Msa0491760 | 0.840261 | 9.669982e-58 | -8.615850e-47 |
| Msa0374130 | Msa0491770 | 0.809218 | 2.109648e-50 | -8.615850e-47 |
| Msa0374130 | Msa0515260 | 0.930855 | 8.907391e-94 | -8.615850e-47 |
| Msa0374130 | Msa0530660 | 0.805731 | 1.158704e-49 | -8.615850e-47 |
| Msa0374130 | Msa0531030 | 0.826133 | 3.207272e-54 | -8.615850e-47 |
| Msa0374130 | Msa0531080 | 0.833052 | 6.652720e-56 | -8.615850e-47 |
| Msa0374130 | Msa0533510 | 0.813590 | 2.370148e-51 | -8.615850e-47 |
| Msa0374130 | Msa0535570 | 0.806992 | 6.282964e-50 | -8.615850e-47 |
| Msa0374130 | Msa0540100 | 0.810819 | 9.535413e-51 | -8.615850e-47 |
| Msa0374130 | Msa0543740 | 0.813696 | 2.245594e-51 | -8.615850e-47 |
| Msa0374130 | Msa0548760 | 0.821263 | 4.430909e-53 | -8.615850e-47 |
| Msa0374130 | Msa0548970 | 0.841449 | 4.720219e-58 | -8.615850e-47 |
| Msa0374130 | Msa0549920 | 0.835385 | 1.730442e-56 | -8.615850e-47 |
| Msa0374130 | Msa0584970 | 0.829788 | 4.231747e-55 | -8.615850e-47 |
| Msa0374130 | Msa0587180 | 0.807245 | 5.553117e-50 | -8.615850e-47 |
| Msa0374130 | Msa0587920 | 0.810621 | 1.052362e-50 | -8.615850e-47 |
| Msa0374130 | Msa0591490 | 0.802349 | 5.850697e-49 | -8.615850e-47 |
| Msa0374130 | Msa0599600 | 0.818551 | 1.848131e-52 | -8.615850e-47 |
| Msa0374130 | Msa0602050 | 0.829542 | 4.855251e-55 | -8.615850e-47 |
| Msa0374130 | Msa0603950 | 0.864474 | 1.184748e-64 | -8.615850e-47 |
| Msa0374130 | Msa0605400 | 0.829723 | 4.389245e-55 | -8.615850e-47 |
| Msa0374130 | Msa0605410 | 0.806916 | 6.519511e-50 | -8.615850e-47 |
| Msa0374130 | Msa0605460 | 0.814225 | 1.716929e-51 | -8.615850e-47 |
| Msa0374130 | Msa0605470 | 0.853107 | 2.973468e-61 | -8.615850e-47 |
| Msa0374130 | Msa0623980 | 0.823027 | 1.727504e-53 | -8.615850e-47 |
| Msa0374130 | Msa0624050 | 0.820580 | 6.362335e-53 | -8.615850e-47 |
| Msa0374130 | Msa0627360 | 0.800306 | 1.533277e-48 | -8.615850e-47 |
| Msa0374130 | Msa0640290 | 0.815486 | 9.017957e-52 | -8.615850e-47 |
| Msa0374130 | Msa0643840 | 0.813120 | 3.006693e-51 | -8.615850e-47 |
| Msa0374130 | Msa0645060 | 0.807158 | 5.794425e-50 | -8.615850e-47 |
| Msa0374130 | Msa0645100 | 0.805063 | 1.599404e-49 | -8.615850e-47 |
| Msa0374130 | Msa0645120 | 0.801744 | 7.791479e-49 | -8.615850e-47 |
| Msa0374130 | Msa0645150 | 0.802092 | 6.609851e-49 | -8.615850e-47 |
| Msa0374130 | Msa0646040 | 0.806670 | 7.347448e-50 | -8.615850e-47 |
| Msa0374130 | Msa0670220 | 0.811866 | 5.649856e-51 | -8.615850e-47 |
| Msa0374130 | Msa0670360 | 0.831428 | 1.678333e-55 | -8.615850e-47 |
| Msa0374130 | Msa0673940 | 0.809605 | 1.742518e-50 | -8.615850e-47 |
| Msa0374130 | Msa0676140 | 0.810699 | 1.012103e-50 | -8.615850e-47 |
| Msa0374130 | Msa0676190 | 0.830100 | 3.551020e-55 | -8.615850e-47 |
| Msa0374130 | Msa0676200 | 0.812522 | 4.063345e-51 | -8.615850e-47 |
| Msa0374130 | Msa0678620 | 0.840116 | 1.055057e-57 | -8.615850e-47 |
| Msa0374130 | Msa0684560 | 0.824443 | 8.049828e-54 | -8.615850e-47 |
| Msa0374130 | Msa0684720 | 0.855248 | 7.164115e-62 | -8.615850e-47 |
| Msa0374130 | Msa0711240 | 0.807316 | 5.364498e-50 | -8.615850e-47 |
| Msa0374130 | Msa0727480 | 0.843954 | 1.019773e-58 | -8.615850e-47 |
| Msa0374130 | Msa0735280 | 0.834662 | 2.633218e-56 | -8.615850e-47 |
| Msa0374130 | Msa0735340 | 0.804465 | 2.131927e-49 | -8.615850e-47 |
| Msa0374130 | Msa0768670 | 0.843477 | 1.367962e-58 | -8.615850e-47 |
| Msa0374130 | Msa0768720 | 0.861661 | 8.771676e-64 | -8.615850e-47 |
| Msa0374130 | Msa0777250 | 0.821968 | 3.045394e-53 | -8.615850e-47 |
| Msa0374130 | Msa0791300 | 0.830671 | 2.574872e-55 | -8.615850e-47 |
| Msa0374130 | Msa0814230 | 0.808631 | 2.816592e-50 | -8.615850e-47 |
| Msa0374130 | Msa0824860 | 0.816769 | 4.662493e-52 | -8.615850e-47 |
| Msa0374130 | Msa0834270 | 0.803767 | 2.978770e-49 | -8.615850e-47 |
| Msa0374130 | Msa0854840 | 0.809695 | 1.666568e-50 | -8.615850e-47 |
| Msa0374130 | Msa0863840 | 0.819496 | 1.126529e-52 | -8.615850e-47 |
| Msa0374130 | Msa0883640 | 0.901837 | 1.788325e-78 | -8.615850e-47 |
| Msa0374130 | Msa0893840 | 0.801996 | 6.918377e-49 | -8.615850e-47 |
| Msa0374130 | Msa0902340 | 0.832448 | 9.397874e-56 | -8.615850e-47 |
| Msa0374130 | Msa0910830 | 0.899510 | 1.846139e-77 | -8.615850e-47 |
| Msa0374130 | Msa0913550 | 0.829542 | 4.856879e-55 | -8.615850e-47 |
| Msa0374130 | Msa0933580 | 0.804545 | 2.051666e-49 | -8.615850e-47 |
| Msa0374130 | Msa0941120 | 0.806776 | 6.979472e-50 | -8.615850e-47 |
| Msa0374130 | Msa0951150 | 0.812353 | 4.425070e-51 | -8.615850e-47 |
| Msa0374130 | Msa0960090 | 0.903242 | 4.246164e-79 | -8.615850e-47 |
| Msa0374130 | Msa0967820 | 0.811073 | 8.401850e-51 | -8.615850e-47 |
| Msa0374130 | Msa0971880 | 0.822647 | 2.118207e-53 | -8.615850e-47 |
| Msa0374130 | Msa0972370 | 0.804496 | 2.100422e-49 | -8.615850e-47 |
| Msa0374130 | Msa0985700 | 0.901172 | 3.506580e-78 | -8.615850e-47 |
| Msa0374130 | Msa0987640 | 0.819727 | 9.976707e-53 | -8.615850e-47 |
| Msa0374130 | Msa0993450 | 0.831263 | 1.843480e-55 | -8.615850e-47 |
| Msa0374130 | Msa1003110 | 0.825574 | 4.351834e-54 | -8.615850e-47 |
| Msa0374130 | Msa1020540 | 0.826484 | 2.645552e-54 | -8.615850e-47 |
| Msa0374130 | Msa1021620 | 0.865308 | 6.489514e-65 | -8.615850e-47 |
| Msa0374130 | Msa1024350 | 0.826426 | 2.730323e-54 | -8.615850e-47 |
| Msa0374130 | Msa1026050 | 0.828937 | 6.808821e-55 | -8.615850e-47 |
| Msa0374130 | Msa1041630 | 0.811170 | 8.002670e-51 | -8.615850e-47 |
| Msa0374130 | Msa1061670 | 0.842673 | 2.239681e-58 | -8.615850e-47 |
| Msa0374130 | Msa1076830 | 0.834101 | 3.640129e-56 | -8.615850e-47 |
| Msa0374130 | Msa1081610 | 0.840104 | 1.063267e-57 | -8.615850e-47 |
| Msa0374130 | Msa1091000 | 0.810354 | 1.201969e-50 | -8.615850e-47 |
| Msa0374130 | Msa1098100 | 0.800688 | 1.281433e-48 | -8.615850e-47 |
| Msa0374130 | Msa1106960 | 0.840012 | 1.123533e-57 | -8.615850e-47 |
| Msa0374130 | Msa1109880 | 0.836295 | 1.017438e-56 | -8.615850e-47 |
| Msa0374130 | Msa1109890 | 0.872561 | 2.894089e-67 | -8.615850e-47 |
| Msa0374130 | Msa1133860 | 0.820691 | 6.001133e-53 | -8.615850e-47 |
| Msa0374130 | Msa1149020 | 0.846774 | 1.758694e-59 | -8.615850e-47 |
| Msa0374130 | Msa1166530 | 0.819951 | 8.867131e-53 | -8.615850e-47 |
| Msa0374130 | Msa1207480 | 0.802095 | 6.600991e-49 | -8.615850e-47 |
| Msa0374130 | Msa1214960 | 0.825143 | 5.505560e-54 | -8.615850e-47 |
| Msa0374130 | Msa1216600 | 0.856739 | 2.624208e-62 | -8.615850e-47 |
| Msa0374130 | Msa1262810 | 0.813915 | 2.010273e-51 | -8.615850e-47 |
| Msa0374130 | Msa1269050 | 0.829503 | 4.964889e-55 | -8.615850e-47 |
| Msa0374130 | Msa1275860 | 0.800973 | 1.120806e-48 | -8.615850e-47 |
| Msa0374130 | Msa1286420 | 0.839775 | 1.295052e-57 | -8.615850e-47 |
| Msa0374130 | Msa1296870 | 0.860398 | 2.123663e-63 | -8.615850e-47 |
| Msa0374130 | Msa1300610 | 0.813237 | 2.833397e-51 | -8.615850e-47 |
| Msa0374130 | Msa1314710 | 0.805513 | 1.287178e-49 | -8.615850e-47 |
| Msa0374130 | Msa1319290 | 0.802005 | 6.887252e-49 | -8.615850e-47 |
| Msa0374130 | Msa1323030 | 0.867781 | 1.062375e-65 | -8.615850e-47 |
| Msa0374130 | Msa1323120 | 0.839472 | 1.552586e-57 | -8.615850e-47 |
| Msa0374130 | Msa1323160 | 0.840651 | 7.648216e-58 | -8.615850e-47 |
| Msa0374130 | Msa1329740 | 0.824212 | 9.123533e-54 | -8.615850e-47 |
| Msa0374130 | Msa1357490 | 0.926945 | 2.331935e-91 | -8.615850e-47 |
| Msa0374130 | Msa1357750 | 0.828168 | 1.044403e-54 | -8.615850e-47 |
| Msa0374130 | Msa1357860 | 0.818698 | 1.711212e-52 | -8.615850e-47 |
| Msa0374130 | Msa1365850 | 0.814668 | 1.369966e-51 | -8.615850e-47 |
| Msa0374130 | Msa1370930 | 0.804529 | 2.068304e-49 | -8.615850e-47 |
| Msa0374130 | Msa1371870 | 0.801555 | 8.521197e-49 | -8.615850e-47 |
| Msa0374130 | Msa1373560 | 0.825219 | 5.280527e-54 | -8.615850e-47 |
| Msa0374130 | Msa1376070 | 0.839834 | 1.250306e-57 | -8.615850e-47 |
| Msa0374130 | Msa1377520 | 0.825908 | 3.627443e-54 | -8.615850e-47 |
| Msa0374130 | Msa1378400 | 0.847875 | 8.766456e-60 | -8.615850e-47 |
| Msa0374130 | Msa1380490 | 0.829862 | 4.058237e-55 | -8.615850e-47 |
| Msa0374130 | Msa1386120 | 0.823521 | 1.324563e-53 | -8.615850e-47 |
| Msa0374130 | Msa1393440 | 0.818821 | 1.604992e-52 | -8.615850e-47 |
| Msa0374130 | Msa1395690 | 0.815661 | 8.246411e-52 | -8.615850e-47 |
| Msa0374130 | Msa1396550 | 0.810686 | 1.018776e-50 | -8.615850e-47 |
| Msa0374130 | Msa1407210 | 0.808369 | 3.203632e-50 | -8.615850e-47 |
| Msa0374130 | Msa1407670 | 0.848188 | 7.185263e-60 | -8.615850e-47 |
| Msa0374130 | Msa1409060 | 0.803173 | 3.956223e-49 | -8.615850e-47 |
| Msa0374130 | Msa1417950 | 0.801586 | 8.395873e-49 | -8.615850e-47 |
| Msa0374130 | Msa1421120 | 0.840675 | 7.538944e-58 | -8.615850e-47 |
| Msa0374130 | Msa1421130 | 0.802410 | 5.684008e-49 | -8.615850e-47 |
| Msa0374130 | Msa1426420 | 0.837150 | 6.159060e-57 | -8.615850e-47 |
| Msa0374130 | Msa1427670 | 0.822751 | 2.003632e-53 | -8.615850e-47 |
| Msa0374130 | Msa1445900 | 0.848981 | 4.333190e-60 | -8.615850e-47 |
| Msa0374130 | Msa1447900 | 0.804829 | 1.789957e-49 | -8.615850e-47 |
| Msa0374130 | Msa1449770 | 0.843773 | 1.140179e-58 | -8.615850e-47 |
| Msa0374130 | Msa1459610 | 0.835198 | 1.929761e-56 | -8.615850e-47 |
| Msa0252880 | Msa0374130 | 0.821200 | 4.582514e-53 | -8.615850e-47 |
| Msa0261400 | Msa0374130 | 0.807272 | 5.481045e-50 | -8.615850e-47 |
| Msa0265060 | Msa0374130 | 0.828112 | 1.077113e-54 | -8.615850e-47 |
| Msa0266640 | Msa0374130 | 0.808977 | 2.375218e-50 | -8.615850e-47 |
| Msa0274250 | Msa0374130 | 0.803841 | 2.875846e-49 | -8.615850e-47 |
| Msa0277280 | Msa0374130 | 0.815911 | 7.251698e-52 | -8.615850e-47 |
| Msa0278940 | Msa0374130 | 0.805150 | 1.533836e-49 | -8.615850e-47 |
| Msa0278950 | Msa0374130 | 0.826503 | 2.618268e-54 | -8.615850e-47 |
| Msa0295980 | Msa0374130 | 0.821040 | 4.986898e-53 | -8.615850e-47 |
| Msa0298270 | Msa0374130 | 0.819551 | 1.094663e-52 | -8.615850e-47 |
| Msa0303120 | Msa0374130 | 0.805195 | 1.501105e-49 | -8.615850e-47 |
| Msa0304550 | Msa0374130 | 0.824945 | 6.130285e-54 | -8.615850e-47 |
| Msa0329650 | Msa0374130 | 0.802742 | 4.857040e-49 | -8.615850e-47 |
| Msa0333940 | Msa0374130 | 0.803169 | 3.963035e-49 | -8.615850e-47 |
| Msa0334050 | Msa0374130 | 0.817094 | 3.941806e-52 | -8.615850e-47 |
| Msa0336070 | Msa0374130 | 0.822926 | 1.823466e-53 | -8.615850e-47 |
| Msa0336630 | Msa0374130 | 0.827744 | 1.320977e-54 | -8.615850e-47 |
| Msa0340650 | Msa0374130 | 0.819474 | 1.139912e-52 | -8.615850e-47 |
| Msa0341110 | Msa0374130 | 0.816321 | 5.873425e-52 | -8.615850e-47 |
| Msa0343720 | Msa0374130 | 0.808827 | 2.557839e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374130 | MtrunA17_Chr3g0124301 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 4.99e-120 | 335 |
| Msa0374130 | MtrunA17_Chr3g0115561 | 39.189 | 148 | 82 | 3 | 11 | 152 | 8 | 153 | 1.73e-31 | 110 |
| Msa0374130 | MtrunA17_Chr2g0283801 | 32.704 | 159 | 96 | 7 | 1 | 152 | 1 | 155 | 1.20e-22 | 88.6 |
| Msa0374130 | MtrunA17_Chr2g0316151 | 29.688 | 128 | 85 | 3 | 24 | 151 | 42 | 164 | 3.40e-13 | 63.9 |
| Msa0374130 | MtrunA17_Chr2g0316111 | 29.688 | 128 | 85 | 3 | 24 | 151 | 42 | 164 | 3.82e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374130 | AT5G10130.1 | 46.914 | 162 | 81 | 3 | 1 | 159 | 1 | 160 | 6.84e-46 | 147 |
| Msa0374130 | AT4G08685.1 | 40.000 | 165 | 87 | 4 | 1 | 159 | 1 | 159 | 2.70e-36 | 123 |
| Msa0374130 | AT1G78040.1 | 36.095 | 169 | 92 | 5 | 1 | 159 | 1 | 163 | 1.66e-34 | 119 |
| Msa0374130 | AT1G78040.3 | 36.095 | 169 | 92 | 5 | 1 | 159 | 1 | 163 | 1.66e-34 | 119 |
| Msa0374130 | AT1G78040.2 | 36.095 | 169 | 92 | 5 | 1 | 159 | 1 | 163 | 1.66e-34 | 119 |
| Msa0374130 | AT1G29140.1 | 35.669 | 157 | 92 | 3 | 4 | 152 | 6 | 161 | 2.57e-26 | 98.2 |
| Msa0374130 | AT5G45880.1 | 39.024 | 123 | 70 | 3 | 25 | 143 | 35 | 156 | 4.40e-23 | 90.1 |
| Msa0374130 | AT4G18596.1 | 33.117 | 154 | 90 | 4 | 1 | 142 | 1 | 153 | 1.86e-22 | 88.2 |
| Msa0374130 | AT4G18596.2 | 33.117 | 154 | 90 | 4 | 1 | 142 | 47 | 199 | 4.72e-22 | 88.6 |
Find 45 sgRNAs with CRISPR-Local
Find 52 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGATTGTGTTGCTGTTAA+TGG | 0.278593 | 3_1:-73326945 | Msa0374130:CDS |
| AATAAACACAACCTTTGATA+TGG | 0.316996 | 3_1:+73326876 | None:intergenic |
| GTGTATTACACGATGATATT+GGG | 0.373900 | 3_1:+73326426 | None:intergenic |
| GGTGTATTACACGATGATAT+TGG | 0.406710 | 3_1:+73326425 | None:intergenic |
| CACTGGAACATACAACATAA+TGG | 0.429786 | 3_1:-73326498 | Msa0374130:CDS |
| CGTCCATAGTCTTCCTGTCT+TGG | 0.431661 | 3_1:+73326552 | None:intergenic |
| ACAAGTAATATTTGAGGAGT+TGG | 0.437901 | 3_1:+73326279 | None:intergenic |
| TAAAGGGAGGATAGAGATGA+GGG | 0.446926 | 3_1:+73326916 | None:intergenic |
| AAATGCTATGGGTTACTTCA+AGG | 0.456909 | 3_1:-73326327 | Msa0374130:CDS |
| TAGGTGCAAAGGTGGGAATT+CGG | 0.460306 | 3_1:-73326577 | Msa0374130:CDS |
| TGGGAATTCGGTGCCAAGAC+AGG | 0.469322 | 3_1:-73326565 | Msa0374130:CDS |
| TATTGTGATACTTGCCGTGC+TGG | 0.471219 | 3_1:-73326857 | Msa0374130:CDS |
| GTGCCAAGACAGGAAGACTA+TGG | 0.475430 | 3_1:-73326555 | Msa0374130:CDS |
| TCTTCACTATGCAAATGCTA+TGG | 0.481660 | 3_1:-73326339 | Msa0374130:CDS |
| TAGCATTTGCATAGTGAAGA+TGG | 0.484441 | 3_1:+73326342 | None:intergenic |
| GATCTGTTACGCCCAGGGTC+CGG | 0.486304 | 3_1:+73326404 | None:intergenic |
| AACATAGCTGTGGCAAGTAA+AGG | 0.486675 | 3_1:+73326899 | None:intergenic |
| ACATAGCTGTGGCAAGTAAA+GGG | 0.489307 | 3_1:+73326900 | None:intergenic |
| GGAGGATAGAGATGAGGGAA+AGG | 0.493157 | 3_1:+73326921 | None:intergenic |
| AGGAGTTGGTGGCAATATTG+AGG | 0.508425 | 3_1:+73326293 | None:intergenic |
| AATCAGACAAGTAATATTTG+AGG | 0.510401 | 3_1:+73326273 | None:intergenic |
| TGCTGGATCTGTTACGCCCA+GGG | 0.512778 | 3_1:+73326399 | None:intergenic |
| AGTAATATTTGAGGAGTTGG+TGG | 0.513246 | 3_1:+73326282 | None:intergenic |
| GTAGTGAGTGAGCACAATGC+TGG | 0.521929 | 3_1:+73326382 | None:intergenic |
| GAGGATAGAGATGAGGGAAA+GGG | 0.521934 | 3_1:+73326922 | None:intergenic |
| ATGCTGGATCTGTTACGCCC+AGG | 0.535067 | 3_1:+73326398 | None:intergenic |
| CTTCACTATGCAAATGCTAT+GGG | 0.535954 | 3_1:-73326338 | Msa0374130:CDS |
| TCGTGTAATACACCGGACCC+TGG | 0.543647 | 3_1:-73326416 | Msa0374130:CDS |
| TTGCATAGTGAAGATGGTTG+AGG | 0.549905 | 3_1:+73326348 | None:intergenic |
| TTCTTGATTAGGTGCAAAGG+TGG | 0.550705 | 3_1:-73326585 | Msa0374130:intron |
| CGTGTAATACACCGGACCCT+GGG | 0.556675 | 3_1:-73326415 | Msa0374130:CDS |
| TGGTGGCAATATTGAGGCAA+AGG | 0.557338 | 3_1:+73326299 | None:intergenic |
| CATTATGTTGTATGTTCCAG+TGG | 0.561706 | 3_1:+73326499 | None:intergenic |
| GTAAAGGGAGGATAGAGATG+AGG | 0.562442 | 3_1:+73326915 | None:intergenic |
| CATTGCTAATCATCATGGCA+AGG | 0.587013 | 3_1:-73326964 | None:intergenic |
| CGATTCTTGATTAGGTGCAA+AGG | 0.587702 | 3_1:-73326588 | Msa0374130:intron |
| ACAGCTATGTTCCATATCAA+AGG | 0.587960 | 3_1:-73326887 | Msa0374130:CDS |
| GAAGGAGTGACAGATTCCAC+TGG | 0.617675 | 3_1:-73326515 | Msa0374130:CDS |
| TTGGATGTAAAATGTGGCGT+TGG | 0.634933 | 3_1:+73326826 | None:intergenic |
| CGTTGGTTTCGAATCCAGCA+CGG | 0.637233 | 3_1:+73326843 | None:intergenic |
| TCTTGATTAGGTGCAAAGGT+GGG | 0.642740 | 3_1:-73326584 | Msa0374130:intron |
| AATATCATCGTGTAATACAC+CGG | 0.667061 | 3_1:-73326423 | Msa0374130:CDS |
| TTTACCTTGGATGTAAAATG+TGG | 0.673598 | 3_1:+73326820 | None:intergenic |
| TTTGATATGGAACATAGCTG+TGG | 0.697489 | 3_1:+73326889 | None:intergenic |
| TAGCTGTGGCAAGTAAAGGG+AGG | 0.702643 | 3_1:+73326903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTAAAAAATTTACGTTG+AGG | + | chr3_1:73326424-73326443 | None:intergenic | 20.0% |
| ! | AATAAACACAACCTTTGATA+TGG | + | chr3_1:73326339-73326358 | None:intergenic | 25.0% |
| ! | AATCAGACAAGTAATATTTG+AGG | + | chr3_1:73326942-73326961 | None:intergenic | 25.0% |
| TTTACCTTGGATGTAAAATG+TGG | + | chr3_1:73326395-73326414 | None:intergenic | 30.0% | |
| TGTAAAATGTACACATGATC+AGG | + | chr3_1:73326495-73326514 | None:intergenic | 30.0% | |
| TATTGTGACGATTCTTGATT+AGG | - | chr3_1:73326616-73326635 | Msa0374130:intron | 30.0% | |
| ! | CAGTTTTGCAAATATTGTCA+TGG | + | chr3_1:73326753-73326772 | None:intergenic | 30.0% |
| GTGTATTACACGATGATATT+GGG | + | chr3_1:73326789-73326808 | None:intergenic | 30.0% | |
| AATATCATCGTGTAATACAC+CGG | - | chr3_1:73326789-73326808 | Msa0374130:intron | 30.0% | |
| ACAAGTAATATTTGAGGAGT+TGG | + | chr3_1:73326936-73326955 | None:intergenic | 30.0% | |
| ! | AAGGATTGTGTTGCTGTTAA+TGG | - | chr3_1:73326267-73326286 | Msa0374130:CDS | 35.0% |
| TTTGATATGGAACATAGCTG+TGG | + | chr3_1:73326326-73326345 | None:intergenic | 35.0% | |
| ACAGCTATGTTCCATATCAA+AGG | - | chr3_1:73326325-73326344 | Msa0374130:CDS | 35.0% | |
| CATTATGTTGTATGTTCCAG+TGG | + | chr3_1:73326716-73326735 | None:intergenic | 35.0% | |
| CACTGGAACATACAACATAA+TGG | - | chr3_1:73326714-73326733 | Msa0374130:intron | 35.0% | |
| GGTGTATTACACGATGATAT+TGG | + | chr3_1:73326790-73326809 | None:intergenic | 35.0% | |
| TAGCATTTGCATAGTGAAGA+TGG | + | chr3_1:73326873-73326892 | None:intergenic | 35.0% | |
| TCTTCACTATGCAAATGCTA+TGG | - | chr3_1:73326873-73326892 | Msa0374130:CDS | 35.0% | |
| CTTCACTATGCAAATGCTAT+GGG | - | chr3_1:73326874-73326893 | Msa0374130:CDS | 35.0% | |
| ! | AAATGCTATGGGTTACTTCA+AGG | - | chr3_1:73326885-73326904 | Msa0374130:CDS | 35.0% |
| AGTAATATTTGAGGAGTTGG+TGG | + | chr3_1:73326933-73326952 | None:intergenic | 35.0% | |
| TAAAGGGAGGATAGAGATGA+GGG | + | chr3_1:73326299-73326318 | None:intergenic | 40.0% | |
| ACATAGCTGTGGCAAGTAAA+GGG | + | chr3_1:73326315-73326334 | None:intergenic | 40.0% | |
| AACATAGCTGTGGCAAGTAA+AGG | + | chr3_1:73326316-73326335 | None:intergenic | 40.0% | |
| TTGGATGTAAAATGTGGCGT+TGG | + | chr3_1:73326389-73326408 | None:intergenic | 40.0% | |
| ! | AACGCCACATTTTACATCCA+AGG | - | chr3_1:73326388-73326407 | Msa0374130:CDS | 40.0% |
| GTTGAGGTGTGTATTTACCT+TGG | + | chr3_1:73326408-73326427 | None:intergenic | 40.0% | |
| CGATTCTTGATTAGGTGCAA+AGG | - | chr3_1:73326624-73326643 | Msa0374130:intron | 40.0% | |
| TTCTTGATTAGGTGCAAAGG+TGG | - | chr3_1:73326627-73326646 | Msa0374130:intron | 40.0% | |
| TCTTGATTAGGTGCAAAGGT+GGG | - | chr3_1:73326628-73326647 | Msa0374130:intron | 40.0% | |
| ! | GACGAAGTTTTCTACACAGA+AGG | - | chr3_1:73326679-73326698 | Msa0374130:intron | 40.0% |
| GTGCTCACTCACTACAAAAA+TGG | - | chr3_1:73326838-73326857 | Msa0374130:CDS | 40.0% | |
| TTGCATAGTGAAGATGGTTG+AGG | + | chr3_1:73326867-73326886 | None:intergenic | 40.0% | |
| GAGGATAGAGATGAGGGAAA+GGG | + | chr3_1:73326293-73326312 | None:intergenic | 45.0% | |
| GTAAAGGGAGGATAGAGATG+AGG | + | chr3_1:73326300-73326319 | None:intergenic | 45.0% | |
| TATTGTGATACTTGCCGTGC+TGG | - | chr3_1:73326355-73326374 | Msa0374130:CDS | 45.0% | |
| TAGGTGCAAAGGTGGGAATT+CGG | - | chr3_1:73326635-73326654 | Msa0374130:intron | 45.0% | |
| TGGTGGCAATATTGAGGCAA+AGG | + | chr3_1:73326916-73326935 | None:intergenic | 45.0% | |
| !! | AGGAGTTGGTGGCAATATTG+AGG | + | chr3_1:73326922-73326941 | None:intergenic | 45.0% |
| GGAGGATAGAGATGAGGGAA+AGG | + | chr3_1:73326294-73326313 | None:intergenic | 50.0% | |
| TAGCTGTGGCAAGTAAAGGG+AGG | + | chr3_1:73326312-73326331 | None:intergenic | 50.0% | |
| !! | CGTTGGTTTCGAATCCAGCA+CGG | + | chr3_1:73326372-73326391 | None:intergenic | 50.0% |
| GTGCCAAGACAGGAAGACTA+TGG | - | chr3_1:73326657-73326676 | Msa0374130:intron | 50.0% | |
| CGTCCATAGTCTTCCTGTCT+TGG | + | chr3_1:73326663-73326682 | None:intergenic | 50.0% | |
| GAAGGAGTGACAGATTCCAC+TGG | - | chr3_1:73326697-73326716 | Msa0374130:intron | 50.0% | |
| GTAGTGAGTGAGCACAATGC+TGG | + | chr3_1:73326833-73326852 | None:intergenic | 50.0% | |
| !! | TGGGAATTCGGTGCCAAGAC+AGG | - | chr3_1:73326647-73326666 | Msa0374130:intron | 55.0% |
| TCGTGTAATACACCGGACCC+TGG | - | chr3_1:73326796-73326815 | Msa0374130:intron | 55.0% | |
| CGTGTAATACACCGGACCCT+GGG | - | chr3_1:73326797-73326816 | Msa0374130:intron | 55.0% | |
| TGCTGGATCTGTTACGCCCA+GGG | + | chr3_1:73326816-73326835 | None:intergenic | 55.0% | |
| ATGCTGGATCTGTTACGCCC+AGG | + | chr3_1:73326817-73326836 | None:intergenic | 55.0% | |
| GATCTGTTACGCCCAGGGTC+CGG | + | chr3_1:73326811-73326830 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 73326262 | 73326972 | 73326262 | ID=Msa0374130;Name=Msa0374130 |
| chr3_1 | mRNA | 73326262 | 73326972 | 73326262 | ID=Msa0374130-mRNA-1;Parent=Msa0374130;Name=Msa0374130-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|160 |
| chr3_1 | exon | 73326825 | 73326972 | 73326825 | ID=Msa0374130-mRNA-1:exon:16677;Parent=Msa0374130-mRNA-1 |
| chr3_1 | exon | 73326262 | 73326596 | 73326262 | ID=Msa0374130-mRNA-1:exon:16676;Parent=Msa0374130-mRNA-1 |
| chr3_1 | CDS | 73326825 | 73326972 | 73326825 | ID=Msa0374130-mRNA-1:cds;Parent=Msa0374130-mRNA-1 |
| chr3_1 | CDS | 73326262 | 73326596 | 73326262 | ID=Msa0374130-mRNA-1:cds;Parent=Msa0374130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
