Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333940 | KAG5546319.1 | 63.535 | 628 | 170 | 6 | 33 | 601 | 30 | 657 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012780 | Msa0333940 | 0.812618 | 3.871891e-51 | -8.615850e-47 |
| Msa0012790 | Msa0333940 | 0.803742 | 3.015545e-49 | -8.615850e-47 |
| Msa0012820 | Msa0333940 | 0.822215 | 2.668987e-53 | -8.615850e-47 |
| Msa0045850 | Msa0333940 | 0.814707 | 1.343050e-51 | -8.615850e-47 |
| Msa0048950 | Msa0333940 | 0.800578 | 1.349724e-48 | -8.615850e-47 |
| Msa0059880 | Msa0333940 | 0.815401 | 9.423496e-52 | -8.615850e-47 |
| Msa0061600 | Msa0333940 | 0.838368 | 2.998393e-57 | -8.615850e-47 |
| Msa0101170 | Msa0333940 | 0.806047 | 9.941247e-50 | -8.615850e-47 |
| Msa0106110 | Msa0333940 | 0.807159 | 5.791375e-50 | -8.615850e-47 |
| Msa0106120 | Msa0333940 | 0.801010 | 1.101701e-48 | -8.615850e-47 |
| Msa0106130 | Msa0333940 | 0.831134 | 1.982462e-55 | -8.615850e-47 |
| Msa0139460 | Msa0333940 | 0.831223 | 1.885314e-55 | -8.615850e-47 |
| Msa0150910 | Msa0333940 | 0.813519 | 2.456514e-51 | -8.615850e-47 |
| Msa0152640 | Msa0333940 | 0.803003 | 4.289660e-49 | -8.615850e-47 |
| Msa0152740 | Msa0333940 | 0.808285 | 3.338125e-50 | -8.615850e-47 |
| Msa0216760 | Msa0333940 | 0.864683 | 1.019517e-64 | -8.615850e-47 |
| Msa0225910 | Msa0333940 | 0.815484 | 9.030613e-52 | -8.615850e-47 |
| Msa0266640 | Msa0333940 | 0.802618 | 5.150250e-49 | -8.615850e-47 |
| Msa0274250 | Msa0333940 | 0.808272 | 3.360703e-50 | -8.615850e-47 |
| Msa0278950 | Msa0333940 | 0.813029 | 3.147288e-51 | -8.615850e-47 |
| Msa0295980 | Msa0333940 | 0.903090 | 4.967734e-79 | -8.615850e-47 |
| Msa0333940 | Msa0334050 | 0.960495 | 1.271982e-118 | -8.615850e-47 |
| Msa0333940 | Msa0374130 | 0.803169 | 3.963035e-49 | -8.615850e-47 |
| Msa0333940 | Msa0469550 | 0.833249 | 5.945649e-56 | -8.615850e-47 |
| Msa0333940 | Msa0515260 | 0.827885 | 1.221484e-54 | -8.615850e-47 |
| Msa0333940 | Msa0533510 | 0.802937 | 4.426101e-49 | -8.615850e-47 |
| Msa0333940 | Msa0548760 | 0.835903 | 1.279490e-56 | -8.615850e-47 |
| Msa0333940 | Msa0548770 | 0.803304 | 3.715808e-49 | -8.615850e-47 |
| Msa0333940 | Msa0548970 | 0.832196 | 1.085225e-55 | -8.615850e-47 |
| Msa0333940 | Msa0584970 | 0.813146 | 2.966984e-51 | -8.615850e-47 |
| Msa0333940 | Msa0605410 | 0.827670 | 1.375886e-54 | -8.615850e-47 |
| Msa0333940 | Msa0645060 | 0.804338 | 2.266295e-49 | -8.615850e-47 |
| Msa0333940 | Msa0645100 | 0.800180 | 1.626149e-48 | -8.615850e-47 |
| Msa0333940 | Msa0645120 | 0.817467 | 3.247568e-52 | -8.615850e-47 |
| Msa0333940 | Msa0676140 | 0.816936 | 4.277090e-52 | -8.615850e-47 |
| Msa0333940 | Msa0676190 | 0.838459 | 2.840428e-57 | -8.615850e-47 |
| Msa0333940 | Msa0676200 | 0.804069 | 2.578376e-49 | -8.615850e-47 |
| Msa0333940 | Msa0678620 | 0.804950 | 1.689247e-49 | -8.615850e-47 |
| Msa0333940 | Msa0684560 | 0.829546 | 4.845811e-55 | -8.615850e-47 |
| Msa0333940 | Msa0684590 | 0.816063 | 6.708244e-52 | -8.615850e-47 |
| Msa0333940 | Msa0684600 | 0.818916 | 1.527186e-52 | -8.615850e-47 |
| Msa0333940 | Msa0684720 | 0.844012 | 9.839634e-59 | -8.615850e-47 |
| Msa0333940 | Msa0777070 | 0.823167 | 1.602084e-53 | -8.615850e-47 |
| Msa0333940 | Msa0854840 | 0.825907 | 3.628172e-54 | -8.615850e-47 |
| Msa0333940 | Msa0864160 | 0.800160 | 1.641577e-48 | -8.615850e-47 |
| Msa0333940 | Msa0883640 | 0.841641 | 4.202281e-58 | -8.615850e-47 |
| Msa0333940 | Msa0910830 | 0.843763 | 1.146830e-58 | -8.615850e-47 |
| Msa0333940 | Msa0924490 | 0.802138 | 6.467353e-49 | -8.615850e-47 |
| Msa0333940 | Msa0960090 | 0.842394 | 2.655431e-58 | -8.615850e-47 |
| Msa0333940 | Msa0967820 | 0.813383 | 2.631465e-51 | -8.615850e-47 |
| Msa0333940 | Msa0985700 | 0.840779 | 7.080104e-58 | -8.615850e-47 |
| Msa0333940 | Msa1024350 | 0.817169 | 3.791591e-52 | -8.615850e-47 |
| Msa0333940 | Msa1061670 | 0.804328 | 2.276798e-49 | -8.615850e-47 |
| Msa0333940 | Msa1081610 | 0.807573 | 4.732110e-50 | -8.615850e-47 |
| Msa0333940 | Msa1087370 | 0.800439 | 1.440319e-48 | -8.615850e-47 |
| Msa0333940 | Msa1109890 | 0.825805 | 3.837582e-54 | -8.615850e-47 |
| Msa0333940 | Msa1207480 | 0.803116 | 4.063720e-49 | -8.615850e-47 |
| Msa0333940 | Msa1216600 | 0.831895 | 1.288155e-55 | -8.615850e-47 |
| Msa0333940 | Msa1296870 | 0.831130 | 1.986892e-55 | -8.615850e-47 |
| Msa0333940 | Msa1323030 | 0.827359 | 1.634564e-54 | -8.615850e-47 |
| Msa0333940 | Msa1323160 | 0.826469 | 2.667660e-54 | -8.615850e-47 |
| Msa0333940 | Msa1329740 | 0.803495 | 3.393071e-49 | -8.615850e-47 |
| Msa0333940 | Msa1357490 | 0.832083 | 1.156950e-55 | -8.615850e-47 |
| Msa0333940 | Msa1357860 | 0.818220 | 2.196362e-52 | -8.615850e-47 |
| Msa0333940 | Msa1378400 | 0.815922 | 7.211006e-52 | -8.615850e-47 |
| Msa0333940 | Msa1380490 | 0.807744 | 4.351577e-50 | -8.615850e-47 |
| Msa0333940 | Msa1407670 | 0.801357 | 9.352808e-49 | -8.615850e-47 |
| Msa0333940 | Msa1411550 | 0.812363 | 4.403229e-51 | -8.615850e-47 |
| Msa0333940 | Msa1426420 | 0.843891 | 1.059976e-58 | -8.615850e-47 |
| Msa0333940 | Msa1459610 | 0.827565 | 1.458821e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333940 | MtrunA17_Chr2g0318341 | 91.167 | 317 | 28 | 0 | 285 | 601 | 25 | 341 | 0.0 | 601 |
| Msa0333940 | MtrunA17_Chr2g0318341 | 87.537 | 337 | 9 | 2 | 1 | 304 | 1 | 337 | 0.0 | 580 |
| Msa0333940 | MtrunA17_Chr2g0318311 | 86.446 | 332 | 42 | 1 | 270 | 601 | 13 | 341 | 0.0 | 588 |
| Msa0333940 | MtrunA17_Chr2g0318311 | 84.273 | 337 | 20 | 2 | 1 | 304 | 1 | 337 | 0.0 | 578 |
| Msa0333940 | MtrunA17_Chr8g0360691 | 66.869 | 329 | 109 | 0 | 273 | 601 | 13 | 341 | 7.26e-161 | 463 |
| Msa0333940 | MtrunA17_Chr8g0360691 | 62.310 | 329 | 90 | 3 | 10 | 304 | 9 | 337 | 2.76e-137 | 403 |
| Msa0333940 | MtrunA17_Chr4g0029291 | 48.214 | 280 | 138 | 4 | 306 | 582 | 120 | 395 | 3.07e-88 | 279 |
| Msa0333940 | MtrunA17_Chr4g0029291 | 43.403 | 288 | 123 | 7 | 38 | 289 | 112 | 395 | 4.51e-70 | 231 |
| Msa0333940 | MtrunA17_Chr4g0029271 | 46.786 | 280 | 143 | 4 | 306 | 582 | 110 | 386 | 2.26e-87 | 276 |
| Msa0333940 | MtrunA17_Chr4g0029271 | 42.807 | 285 | 124 | 5 | 41 | 289 | 105 | 386 | 1.31e-71 | 235 |
| Msa0333940 | MtrunA17_Chr2g0287361 | 43.525 | 278 | 139 | 5 | 334 | 601 | 62 | 331 | 7.45e-76 | 244 |
| Msa0333940 | MtrunA17_Chr2g0287361 | 36.610 | 295 | 130 | 8 | 33 | 293 | 38 | 309 | 8.66e-54 | 186 |
| Msa0333940 | MtrunA17_Chr2g0292811 | 43.165 | 278 | 140 | 5 | 334 | 601 | 61 | 330 | 2.49e-74 | 240 |
| Msa0333940 | MtrunA17_Chr2g0292811 | 37.591 | 274 | 123 | 6 | 33 | 274 | 37 | 294 | 8.88e-53 | 183 |
| Msa0333940 | MtrunA17_Chr2g0292801 | 42.857 | 280 | 147 | 5 | 325 | 601 | 324 | 593 | 3.98e-72 | 243 |
| Msa0333940 | MtrunA17_Chr2g0292801 | 34.951 | 309 | 149 | 8 | 31 | 304 | 298 | 589 | 1.67e-50 | 184 |
| Msa0333940 | MtrunA17_Chr2g0292821 | 42.500 | 280 | 148 | 5 | 325 | 601 | 324 | 593 | 3.87e-71 | 240 |
| Msa0333940 | MtrunA17_Chr2g0292821 | 34.951 | 309 | 149 | 8 | 31 | 304 | 298 | 589 | 6.28e-50 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333940 | AT5G54370.1 | 64.548 | 299 | 101 | 2 | 306 | 601 | 41 | 337 | 2.72e-145 | 424 |
| Msa0333940 | AT5G54370.1 | 54.192 | 334 | 113 | 5 | 7 | 304 | 4 | 333 | 6.63e-123 | 367 |
| Msa0333940 | AT1G54890.1 | 61.589 | 302 | 111 | 3 | 305 | 601 | 46 | 347 | 2.43e-135 | 399 |
| Msa0333940 | AT1G54890.1 | 53.172 | 331 | 113 | 5 | 16 | 304 | 13 | 343 | 1.12e-117 | 353 |
| Msa0333940 | AT4G27400.1 | 55.836 | 317 | 135 | 3 | 289 | 601 | 26 | 341 | 6.50e-130 | 385 |
| Msa0333940 | AT4G27400.1 | 49.398 | 332 | 126 | 5 | 13 | 304 | 8 | 337 | 1.95e-106 | 324 |
| Msa0333940 | AT5G60520.1 | 51.698 | 265 | 124 | 3 | 306 | 567 | 64 | 327 | 1.30e-92 | 288 |
| Msa0333940 | AT5G60520.1 | 45.487 | 277 | 113 | 5 | 34 | 274 | 53 | 327 | 2.09e-75 | 244 |
| Msa0333940 | AT5G60530.1 | 49.451 | 273 | 133 | 3 | 306 | 574 | 164 | 435 | 9.99e-92 | 290 |
| Msa0333940 | AT5G60530.1 | 45.263 | 285 | 117 | 6 | 34 | 281 | 153 | 435 | 8.94e-79 | 256 |
| Msa0333940 | AT3G19430.1 | 41.254 | 303 | 157 | 6 | 303 | 601 | 274 | 559 | 2.03e-73 | 245 |
| Msa0333940 | AT3G19430.1 | 36.039 | 308 | 143 | 8 | 34 | 304 | 265 | 555 | 2.74e-53 | 191 |
| Msa0333940 | AT3G19430.2 | 41.254 | 303 | 157 | 6 | 303 | 601 | 297 | 582 | 2.34e-73 | 246 |
| Msa0333940 | AT3G19430.2 | 36.039 | 308 | 143 | 8 | 34 | 304 | 288 | 578 | 3.11e-53 | 191 |
Find 156 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCCACACCATCATCAATT+TGG | 0.212135 | 2_4:+51991437 | Msa0333940:CDS |
| ACAGATATTTCAGCAACTTC+TGG | 0.256973 | 2_4:-51988278 | None:intergenic |
| ACAGATATTTCAGCAACTTC+TGG | 0.256973 | 2_4:-51991604 | None:intergenic |
| ATTGCCACGCCTGGCTTTGC+CGG | 0.261338 | 2_4:-51988461 | None:intergenic |
| CATCAGGAATCTGATAATTA+TGG | 0.264771 | 2_4:-51988337 | None:intergenic |
| CATCAGGAATCTGATAATTA+TGG | 0.264771 | 2_4:-51991663 | None:intergenic |
| AGATAGCAAACTTTGTGTTT+TGG | 0.265953 | 2_4:-51990844 | None:intergenic |
| ATTGCCACGCCTGGCTTTGC+CGG | 0.284921 | 2_4:-51991787 | None:intergenic |
| GATCCACGACCATTACAATT+TGG | 0.298259 | 2_4:-51991208 | None:intergenic |
| TCCAAGAACTCCTTCAACTT+TGG | 0.319801 | 2_4:-51991737 | None:intergenic |
| GATGTGCAGTTCAAATTCTA+TGG | 0.321248 | 2_4:+51988380 | Msa0333940:CDS |
| GATGTGCAGTTCAAATTCTA+TGG | 0.321248 | 2_4:+51991706 | Msa0333940:CDS |
| CACGTGGAGAGGTGACCTTC+AGG | 0.323310 | 2_4:-51988188 | None:intergenic |
| CATGTAGAGAGGTGACCTTC+AGG | 0.334170 | 2_4:-51991514 | None:intergenic |
| TCCAAAGTTGAAGGAGTTCT+TGG | 0.337116 | 2_4:+51988410 | Msa0333940:intron |
| TCCAAAGTTGAAGGAGTTCT+TGG | 0.337116 | 2_4:+51991736 | Msa0333940:CDS |
| TAAAACGAGCATTGATTTGA+AGG | 0.368629 | 2_4:-51991327 | None:intergenic |
| GATCTTGAAGGGCACTGAAT+AGG | 0.375732 | 2_4:-51990811 | None:intergenic |
| TAAAACGAGCATTGATTTGA+AGG | 0.375773 | 2_4:-51988001 | None:intergenic |
| ATCTTGAAGGGCACTGAATA+GGG | 0.384154 | 2_4:-51990810 | None:intergenic |
| CAGATATTTCAGCAACTTCT+GGG | 0.400574 | 2_4:-51988277 | None:intergenic |
| CAGATATTTCAGCAACTTCT+GGG | 0.400574 | 2_4:-51991603 | None:intergenic |
| AGCCACACCATCATCAATTT+GGG | 0.401698 | 2_4:+51991438 | Msa0333940:CDS |
| GAAGGCTTGGAGATTGAATA+TGG | 0.405534 | 2_4:+51991907 | Msa0333940:CDS |
| GATCTGCATGCTTGGACCCT+CGG | 0.411633 | 2_4:+51991227 | Msa0333940:CDS |
| GGCGTGGCAATGCCGGTCAT+TGG | 0.420807 | 2_4:+51991799 | Msa0333940:CDS |
| TATACTTGGATTCAAGCATT+GGG | 0.425530 | 2_4:+51988056 | Msa0333940:CDS |
| TATACTTGGATTCAAGCATT+GGG | 0.425530 | 2_4:+51991382 | Msa0333940:CDS |
| TGGCCGCGGATCTGCGTGCT+TGG | 0.430493 | 2_4:+51987893 | Msa0333940:CDS |
| AGATTCAGTGCAGGAAGGCT+TGG | 0.436915 | 2_4:+51991894 | Msa0333940:CDS |
| CCTCGTTTCGTTGGTGCGGA+TGG | 0.440785 | 2_4:+51987918 | Msa0333940:CDS |
| TGAGAAAACAACGGCTCTTA+CGG | 0.441610 | 2_4:-51987345 | None:intergenic |
| GGGTTAGCTGGTGATCTTGA+AGG | 0.441826 | 2_4:-51987394 | None:intergenic |
| AACTATACCATTACCACTGC+TGG | 0.442336 | 2_4:-51991953 | None:intergenic |
| GAAGGCATGGATATTGAGTA+TGG | 0.445718 | 2_4:+51988581 | Msa0333940:CDS |
| ACGAGCATTGATTTGAAGGT+TGG | 0.446132 | 2_4:-51987997 | None:intergenic |
| CCTCGGTTCGTTGGTGCGGA+TGG | 0.452228 | 2_4:+51991244 | Msa0333940:CDS |
| ACTACTGGCATTGCCACGCC+TGG | 0.455683 | 2_4:-51988470 | None:intergenic |
| AAAGCCAGGCGTGGCAATGC+CGG | 0.457703 | 2_4:+51991792 | Msa0333940:CDS |
| GGAGACCAAGGGATTATACT+TGG | 0.459154 | 2_4:+51988042 | Msa0333940:CDS |
| TTGGTCTCCCTTGCGGCCTA+AGG | 0.460474 | 2_4:-51991354 | None:intergenic |
| GGAGACCAAGGGATTATACT+TGG | 0.461637 | 2_4:+51991368 | Msa0333940:CDS |
| ATGACCGGCATTGCCACGCC+TGG | 0.467891 | 2_4:-51991796 | None:intergenic |
| TTGGTCTCCCTAGCGGCCTA+AGG | 0.471410 | 2_4:-51988028 | None:intergenic |
| GGGTTAGCAGGTGATCTTGA+AGG | 0.475004 | 2_4:-51990823 | None:intergenic |
| ATGGATTCTACTGTCCTCCT+TGG | 0.475359 | 2_4:-51988318 | None:intergenic |
| ATGGATTCTACTGTCCTCCT+TGG | 0.475359 | 2_4:-51991644 | None:intergenic |
| GTGGCAATGCCGGTCATTGG+AGG | 0.478744 | 2_4:+51991802 | Msa0333940:CDS |
| TTATACTTGGATTCAAGCAT+TGG | 0.481860 | 2_4:+51988055 | Msa0333940:CDS |
| TTATACTTGGATTCAAGCAT+TGG | 0.481860 | 2_4:+51991381 | Msa0333940:CDS |
| TTGTCTTCCCCTCCAACTAC+TGG | 0.482550 | 2_4:-51988485 | None:intergenic |
| TGAGCAAAACAATCATCATC+AGG | 0.483129 | 2_4:-51988353 | None:intergenic |
| TGAGCAAAACAATCATCATC+AGG | 0.483129 | 2_4:-51991679 | None:intergenic |
| GGCGTGGCAATGCCAGTAGT+TGG | 0.486470 | 2_4:+51988473 | Msa0333940:CDS |
| TTTCAAAATCCGGCAAAGCC+AGG | 0.488564 | 2_4:+51988452 | Msa0333940:CDS |
| TTTCAAAATCCGGCAAAGCC+AGG | 0.488564 | 2_4:+51991778 | Msa0333940:CDS |
| GGTCGTAAAGCAAATTGTAA+TGG | 0.494042 | 2_4:+51987873 | Msa0333940:intron |
| CTACTGTCCTCCTTGGTGAC+AGG | 0.494181 | 2_4:-51988311 | None:intergenic |
| CTACTGTCCTCCTTGGTGAC+AGG | 0.494181 | 2_4:-51991637 | None:intergenic |
| CCTCGGATTGCCACGTGGAG+AGG | 0.499460 | 2_4:-51988199 | None:intergenic |
| CTGAAGGTCACCTCTCTACA+TGG | 0.503524 | 2_4:+51991515 | Msa0333940:CDS |
| GGAGATTGAATATGGTATGA+TGG | 0.508182 | 2_4:+51991915 | Msa0333940:CDS |
| TGCTTGGACCCTCGGTTCGT+TGG | 0.509275 | 2_4:+51991235 | Msa0333940:CDS |
| TTTATCGGCCTTAGGCCGCT+AGG | 0.513330 | 2_4:+51988020 | Msa0333940:CDS |
| AATGCTCATTCCTCCTTCCA+TGG | 0.514259 | 2_4:-51987956 | None:intergenic |
| TTCTGTTAAAGATTCAGTGC+AGG | 0.514763 | 2_4:+51991885 | Msa0333940:CDS |
| AAACCAAATTGTAATGGTCG+TGG | 0.516808 | 2_4:+51991205 | Msa0333940:CDS |
| GGATATTGAGTATGGTATGA+TGG | 0.518205 | 2_4:+51988589 | Msa0333940:CDS |
| TGGCAATGCCGGTCATTGGA+GGG | 0.520893 | 2_4:+51991803 | Msa0333940:CDS |
| AGATTCAGTGCAGGAAGGCA+TGG | 0.525207 | 2_4:+51988568 | Msa0333940:CDS |
| TGCTTGGACCCTCGTTTCGT+TGG | 0.528337 | 2_4:+51987909 | Msa0333940:CDS |
| TGGTCGTGGATCTGCATGCT+TGG | 0.528868 | 2_4:+51991219 | Msa0333940:CDS |
| GGTTAGCAGGTGATCTTGAA+GGG | 0.529857 | 2_4:-51990822 | None:intergenic |
| ATGTAGAGAGGTGACCTTCA+GGG | 0.531349 | 2_4:-51991513 | None:intergenic |
| ACGTGGAGAGGTGACCTTCA+GGG | 0.531866 | 2_4:-51988187 | None:intergenic |
| GGACCCTCGGTTCGTTGGTG+CGG | 0.532291 | 2_4:+51991240 | Msa0333940:CDS |
| TTGTCTTCCCCTCCAATGAC+CGG | 0.533192 | 2_4:-51991811 | None:intergenic |
| ATCTGAAGATGCAAGGGATG+TGG | 0.533450 | 2_4:-51988516 | None:intergenic |
| GGTGGTGCCAGCAGTGGTAA+TGG | 0.535725 | 2_4:+51991946 | Msa0333940:CDS |
| CAAGACAATCTGAAGAAACA+AGG | 0.537212 | 2_4:-51991849 | None:intergenic |
| GGTGGTGCTAGCAGTGGTAA+TGG | 0.538430 | 2_4:+51988620 | Msa0333940:CDS |
| TTTATCGGCCTTAGGCCGCA+AGG | 0.538998 | 2_4:+51991346 | Msa0333940:CDS |
| GGTTTATCGTCCAAAGTTGA+AGG | 0.540641 | 2_4:+51991727 | Msa0333940:CDS |
| TGAATCCAAGTATAATCCCT+TGG | 0.542313 | 2_4:-51988047 | None:intergenic |
| TGAATCCAAGTATAATCCCT+TGG | 0.542313 | 2_4:-51991373 | None:intergenic |
| CGTCATAAGAGAGCTTCAAA+TGG | 0.545184 | 2_4:-51991474 | None:intergenic |
| AGTGCTCATTCCTCCTTCCA+TGG | 0.545876 | 2_4:-51991282 | None:intergenic |
| ATCTGAAGAAACAAGGGATG+TGG | 0.547311 | 2_4:-51991842 | None:intergenic |
| TTCTGCTAAAGATTCAGTGC+AGG | 0.549391 | 2_4:+51988559 | Msa0333940:CDS |
| GGCAATGCCGGTCATTGGAG+GGG | 0.549475 | 2_4:+51991804 | Msa0333940:CDS |
| GTGGCAATGCCAGTAGTTGG+AGG | 0.551168 | 2_4:+51988476 | Msa0333940:CDS |
| CCTCGGATTGCCATGTAGAG+AGG | 0.553637 | 2_4:-51991525 | None:intergenic |
| GGTCGTAAACCAAATTGTAA+TGG | 0.554034 | 2_4:+51991199 | Msa0333940:intron |
| TCGTCATCCCAAATTGATGA+TGG | 0.560527 | 2_4:-51991445 | None:intergenic |
| CAAGACAATCTGAAGATGCA+AGG | 0.565565 | 2_4:-51988523 | None:intergenic |
| GGTATGATGGATTGCACTGG+TGG | 0.568752 | 2_4:+51988602 | Msa0333940:CDS |
| GATCTTGAAGGACATTGAGC+AGG | 0.570539 | 2_4:-51987382 | None:intergenic |
| TGGCAATGCCAGTAGTTGGA+GGG | 0.574377 | 2_4:+51988477 | Msa0333940:CDS |
| AAAAGTTGTGTGAATCAAAG+AGG | 0.574407 | 2_4:-51991408 | None:intergenic |
| CATTTGAAGCTCTCTTATGA+CGG | 0.574479 | 2_4:+51988149 | Msa0333940:intron |
| CATTTGAAGCTCTCTTATGA+CGG | 0.574479 | 2_4:+51991475 | Msa0333940:CDS |
| TTAGGCCGCAAGGGAGACCA+AGG | 0.575605 | 2_4:+51991356 | Msa0333940:CDS |
| GAAGCTCTCTTATGACGGAA+AGG | 0.577165 | 2_4:+51988154 | Msa0333940:intron |
| GAAGCTCTCTTATGACGGAA+AGG | 0.577165 | 2_4:+51991480 | Msa0333940:CDS |
| TTATCGGCCTTAGGCCGCTA+GGG | 0.584302 | 2_4:+51988021 | Msa0333940:CDS |
| TTAGGCCGCTAGGGAGACCA+AGG | 0.588612 | 2_4:+51988030 | Msa0333940:CDS |
| GAGGAATGAGCATTTCAGCT+TGG | 0.589342 | 2_4:+51987965 | Msa0333940:CDS |
| ATCGAATGAGAACGGTGTCA+TGG | 0.591031 | 2_4:+51988247 | Msa0333940:CDS |
| ATCGAATGAGAACGGTGTCA+TGG | 0.591031 | 2_4:+51991573 | Msa0333940:CDS |
| TGCACTGGTGGTGCCAGCAG+TGG | 0.591546 | 2_4:+51991940 | Msa0333940:CDS |
| GGCAATGCCAGTAGTTGGAG+GGG | 0.593366 | 2_4:+51988478 | Msa0333940:CDS |
| CAAGATCACCAGCTAACCCA+AGG | 0.593988 | 2_4:+51987398 | Msa0333940:CDS |
| TAATCCCTTGGTCTCCCTTG+CGG | 0.596610 | 2_4:-51991361 | None:intergenic |
| AAAACAACGGCTCTTACGGT+TGG | 0.597533 | 2_4:-51987341 | None:intergenic |
| AAGACAATCTGAAGATGCAA+GGG | 0.603290 | 2_4:-51988522 | None:intergenic |
| AAAGCAAATTGTAATGGCCG+CGG | 0.604200 | 2_4:+51987879 | Msa0333940:CDS |
| TTATCGGCCTTAGGCCGCAA+GGG | 0.605783 | 2_4:+51991347 | Msa0333940:CDS |
| CCTCTCCACGTGGCAATCCG+AGG | 0.606272 | 2_4:+51988199 | Msa0333940:CDS |
| GGTCCAAGCACGCAGATCCG+CGG | 0.606584 | 2_4:-51987896 | None:intergenic |
| GTTAAAGATTCAGTGCAGGA+AGG | 0.612449 | 2_4:+51991889 | Msa0333940:CDS |
| GGACCCTCGTTTCGTTGGTG+CGG | 0.615729 | 2_4:+51987914 | Msa0333940:CDS |
| GGTATGATGGATTGCACTGG+TGG | 0.616779 | 2_4:+51991928 | Msa0333940:CDS |
| CCATCCGCACCAACGAAACG+AGG | 0.619171 | 2_4:-51987918 | None:intergenic |
| CAATGTGGTGCCTGTCACCA+AGG | 0.622527 | 2_4:+51988301 | Msa0333940:CDS |
| CAATGTGGTGCCTGTCACCA+AGG | 0.622527 | 2_4:+51991627 | Msa0333940:CDS |
| ATACTTGGATTCAAGCATTG+GGG | 0.623520 | 2_4:+51988057 | Msa0333940:CDS |
| ATACTTGGATTCAAGCATTG+GGG | 0.623520 | 2_4:+51991383 | Msa0333940:CDS |
| TGCACTGGTGGTGCTAGCAG+TGG | 0.626595 | 2_4:+51988614 | Msa0333940:CDS |
| CATCCGCACCAACGAACCGA+GGG | 0.629982 | 2_4:-51991243 | None:intergenic |
| GAAGGACATTGAGCAGGACA+AGG | 0.630142 | 2_4:-51987376 | None:intergenic |
| AAGGATCTCGTAATCCCTGA+AGG | 0.634498 | 2_4:+51988173 | Msa0333940:CDS |
| AAGGATCTCGTAATCCCTGA+AGG | 0.634498 | 2_4:+51991499 | Msa0333940:CDS |
| CCATCCGCACCAACGAACCG+AGG | 0.635702 | 2_4:-51991244 | None:intergenic |
| ATCCCAAATTGATGATGGTG+TGG | 0.638854 | 2_4:-51991440 | None:intergenic |
| AAGACAATCTGAAGAAACAA+GGG | 0.640149 | 2_4:-51991848 | None:intergenic |
| CCTCTCTACATGGCAATCCG+AGG | 0.646287 | 2_4:+51991525 | Msa0333940:CDS |
| GCTAAAGATTCAGTGCAGGA+AGG | 0.646657 | 2_4:+51988563 | Msa0333940:CDS |
| AAATCCGGCAAAGCCAGGCG+TGG | 0.649193 | 2_4:+51988457 | Msa0333940:CDS |
| AAATCCGGCAAAGCCAGGCG+TGG | 0.649193 | 2_4:+51991783 | Msa0333940:CDS |
| GAGAGAACATCGAATGAGAA+CGG | 0.650582 | 2_4:+51988239 | Msa0333940:CDS |
| GAGAGAACATCGAATGAGAA+CGG | 0.650582 | 2_4:+51991565 | Msa0333940:CDS |
| TATGGTATGATGGATTGCAC+TGG | 0.652916 | 2_4:+51988599 | Msa0333940:CDS |
| TAATCCCTTGGTCTCCCTAG+CGG | 0.654842 | 2_4:-51988035 | None:intergenic |
| TACTTGGATTCAAGCATTGG+GGG | 0.654990 | 2_4:+51988058 | Msa0333940:CDS |
| TACTTGGATTCAAGCATTGG+GGG | 0.654990 | 2_4:+51991384 | Msa0333940:CDS |
| TATGGTATGATGGATTGCAC+TGG | 0.671149 | 2_4:+51991925 | Msa0333940:CDS |
| GTAGTTTCTTGAGAAAACAA+CGG | 0.671848 | 2_4:-51987354 | None:intergenic |
| CTGAAGGTCACCTCTCCACG+TGG | 0.671875 | 2_4:+51988189 | Msa0333940:CDS |
| AAGATCACCAGCTAACCCAA+GGG | 0.673008 | 2_4:+51987399 | Msa0333940:CDS |
| CATCCGCACCAACGAAACGA+GGG | 0.683977 | 2_4:-51987917 | None:intergenic |
| TAGGCCGCTAGGGAGACCAA+GGG | 0.701533 | 2_4:+51988031 | Msa0333940:CDS |
| TAGGCCGCAAGGGAGACCAA+GGG | 0.706685 | 2_4:+51991357 | Msa0333940:CDS |
| TGCTGAAATATCTGTCAATG+TGG | 0.712131 | 2_4:+51988286 | Msa0333940:CDS |
| TGCTGAAATATCTGTCAATG+TGG | 0.712131 | 2_4:+51991612 | Msa0333940:CDS |
| TGTGGTGCCTGTCACCAAGG+AGG | 0.732407 | 2_4:+51988304 | Msa0333940:CDS |
| TGTGGTGCCTGTCACCAAGG+AGG | 0.732407 | 2_4:+51991630 | Msa0333940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTGTGATAAATTTAATA+AGG | + | chr2_4:51987536-51987555 | Msa0333940:intron | 15.0% |
| !!! | TTTTATACATAGTACATAAT+AGG | + | chr2_4:51989520-51989539 | Msa0333940:intron | 15.0% |
| !!! | TTTTTCGTATTTTATGATAA+TGG | + | chr2_4:51990959-51990978 | Msa0333940:intron | 15.0% |
| !! | TGTGATAAATTTAATAAGGT+TGG | + | chr2_4:51987540-51987559 | Msa0333940:intron | 20.0% |
| !! | AACAAGTGATCATTATATAT+TGG | + | chr2_4:51987796-51987815 | Msa0333940:intron | 20.0% |
| !! | AACAAGTGTTCATTATATAT+TGG | + | chr2_4:51987841-51987860 | Msa0333940:intron | 20.0% |
| !!! | ATGGTTACAAAACAATATTT+TGG | - | chr2_4:51988748-51988767 | None:intergenic | 20.0% |
| !! | AAATTGGATGTTTATTCATT+CGG | - | chr2_4:51989187-51989206 | None:intergenic | 20.0% |
| !! | TGCATGTAAAAATAAGATAA+AGG | + | chr2_4:51989453-51989472 | Msa0333940:intron | 20.0% |
| !! | GCATGTAAAAATAAGATAAA+GGG | + | chr2_4:51989454-51989473 | Msa0333940:intron | 20.0% |
| !! | AAGCAAAAAGATAGTATATA+AGG | + | chr2_4:51990594-51990613 | Msa0333940:intron | 20.0% |
| !! | GATTATTTATGTTCAATACT+TGG | + | chr2_4:51990909-51990928 | Msa0333940:intron | 20.0% |
| !! | AACAAGTGTTAATTATATAG+TGG | + | chr2_4:51991165-51991184 | Msa0333940:intron | 20.0% |
| !! | GAAATAATCCTATTTGAGAT+CGG | - | chr2_4:51987696-51987715 | None:intergenic | 25.0% |
| ! | ATTATATATTGGATGCGAAT+AGG | + | chr2_4:51987852-51987871 | Msa0333940:intron | 25.0% |
| !! | TAGTTTGCAGAAGATAAATT+TGG | + | chr2_4:51988645-51988664 | Msa0333940:intron | 25.0% |
| !! | ACGTAATTATAAGAAAGCAT+TGG | - | chr2_4:51988677-51988696 | None:intergenic | 25.0% |
| ! | AACTCAGAAAAAAATGTTTG+TGG | + | chr2_4:51988708-51988727 | Msa0333940:intron | 25.0% |
| ! | ACTCAGAAAAAAATGTTTGT+GGG | + | chr2_4:51988709-51988728 | Msa0333940:intron | 25.0% |
| ! | TTCTTACACAAAAGGAAATA+TGG | - | chr2_4:51988767-51988786 | None:intergenic | 25.0% |
| ! | TAAGACAATTCTTACACAAA+AGG | - | chr2_4:51988775-51988794 | None:intergenic | 25.0% |
| ! | AATTAACACGCTTATTCAAA+AGG | - | chr2_4:51988831-51988850 | None:intergenic | 25.0% |
| ! | TTTGAATAAGCGTGTTAATT+TGG | + | chr2_4:51988831-51988850 | Msa0333940:intron | 25.0% |
| ! | CAATCACAATAGAAAAACAA+TGG | - | chr2_4:51988862-51988881 | None:intergenic | 25.0% |
| ! | TAACTCAAAGAAACATGTTA+TGG | + | chr2_4:51988889-51988908 | Msa0333940:intron | 25.0% |
| ! | AACTCAAAGAAACATGTTAT+GGG | + | chr2_4:51988890-51988909 | Msa0333940:intron | 25.0% |
| ! | TTCATTTGCATATAATCACT+AGG | - | chr2_4:51988958-51988977 | None:intergenic | 25.0% |
| ! | CAACAATAGATTTCAATACA+AGG | - | chr2_4:51989016-51989035 | None:intergenic | 25.0% |
| !!! | TGTTGCATTCTAAAGTATTA+TGG | + | chr2_4:51989217-51989236 | Msa0333940:intron | 25.0% |
| ! | ATTAGAAGGGAAAAATACTA+AGG | + | chr2_4:51990065-51990084 | Msa0333940:intron | 25.0% |
| !! | AAAATTCAAAACGCAGATTT+TGG | + | chr2_4:51990160-51990179 | Msa0333940:intron | 25.0% |
| ! | GGTATATGATAAGTTATGTA+GGG | - | chr2_4:51990292-51990311 | None:intergenic | 25.0% |
| ! | GTGCAGTTATATAAAAGATT+GGG | - | chr2_4:51990313-51990332 | None:intergenic | 25.0% |
| ! | TGTGCAGTTATATAAAAGAT+TGG | - | chr2_4:51990314-51990333 | None:intergenic | 25.0% |
| ! | AAAAGATAGTATATAAGGTG+AGG | + | chr2_4:51990599-51990618 | Msa0333940:intron | 25.0% |
| !! | TGTTCTTTTATGAAATTCAC+AGG | - | chr2_4:51991095-51991114 | None:intergenic | 25.0% |
| GTAGTTTCTTGAGAAAACAA+CGG | - | chr2_4:51987357-51987376 | None:intergenic | 30.0% | |
| ! | TTGTTTTCTATTTCCATGGA+AGG | + | chr2_4:51987943-51987962 | Msa0333940:CDS | 30.0% |
| !! | TAAAACGAGCATTGATTTGA+AGG | - | chr2_4:51988004-51988023 | None:intergenic | 30.0% |
| ! | CAAATCAATGCTCGTTTTAT+CGG | + | chr2_4:51988005-51988024 | Msa0333940:CDS | 30.0% |
| TTATACTTGGATTCAAGCAT+TGG | + | chr2_4:51988055-51988074 | Msa0333940:CDS | 30.0% | |
| TATACTTGGATTCAAGCATT+GGG | + | chr2_4:51988056-51988075 | Msa0333940:CDS | 30.0% | |
| AAAAGTTGTGTGAATCAAAG+AGG | - | chr2_4:51988085-51988104 | None:intergenic | 30.0% | |
| CATCAGGAATCTGATAATTA+TGG | - | chr2_4:51988340-51988359 | None:intergenic | 30.0% | |
| !! | TGATGATTGTTTTGCTCATT+TGG | + | chr2_4:51988358-51988377 | Msa0333940:CDS | 30.0% |
| AATTAACAACTCAAAGCTGA+GGG | - | chr2_4:51989379-51989398 | None:intergenic | 30.0% | |
| TAATTAACAACTCAAAGCTG+AGG | - | chr2_4:51989380-51989399 | None:intergenic | 30.0% | |
| ACAATCAGATATCCATAGTT+CGG | + | chr2_4:51989875-51989894 | Msa0333940:intron | 30.0% | |
| TCAATTAACTCGAAATTGGA+AGG | - | chr2_4:51989966-51989985 | None:intergenic | 30.0% | |
| ACAAATCACTCAAGATTAGA+AGG | + | chr2_4:51990051-51990070 | Msa0333940:intron | 30.0% | |
| CAAATCACTCAAGATTAGAA+GGG | + | chr2_4:51990052-51990071 | Msa0333940:intron | 30.0% | |
| !!! | TCACTAGTAAGTTTTAGAAG+AGG | - | chr2_4:51990114-51990133 | None:intergenic | 30.0% |
| !! | GTTTTGAATTTTGTGTCACT+TGG | - | chr2_4:51990152-51990171 | None:intergenic | 30.0% |
| GGGTATATGATAAGTTATGT+AGG | - | chr2_4:51990293-51990312 | None:intergenic | 30.0% | |
| ! | GATAATGAAAGTTGACTTAG+TGG | - | chr2_4:51990454-51990473 | None:intergenic | 30.0% |
| TGAATTGCTGGAATTATTTG+TGG | - | chr2_4:51990516-51990535 | None:intergenic | 30.0% | |
| CTTATAGAAAACTCAACAAG+TGG | - | chr2_4:51990577-51990596 | None:intergenic | 30.0% | |
| CAAACAAGAGAAAATCAACA+TGG | + | chr2_4:51990648-51990667 | Msa0333940:intron | 30.0% | |
| TCAGTTTCTTGAGAAAACAA+CGG | - | chr2_4:51990786-51990805 | None:intergenic | 30.0% | |
| ! | GATAGCAAACTTTGTGTTTT+GGG | - | chr2_4:51990846-51990865 | None:intergenic | 30.0% |
| ! | AGATAGCAAACTTTGTGTTT+TGG | - | chr2_4:51990847-51990866 | None:intergenic | 30.0% |
| !! | TAAAACGAGCATTGATTTGA+AGG | - | chr2_4:51988004-51988023 | None:intergenic | 30.0% |
| ! | CAAATCAATGCTCGTTTTAT+CGG | + | chr2_4:51988005-51988024 | Msa0333940:CDS | 30.0% |
| TTATACTTGGATTCAAGCAT+TGG | + | chr2_4:51988055-51988074 | Msa0333940:CDS | 30.0% | |
| TATACTTGGATTCAAGCATT+GGG | + | chr2_4:51988056-51988075 | Msa0333940:CDS | 30.0% | |
| AAAAGTTGTGTGAATCAAAG+AGG | - | chr2_4:51988085-51988104 | None:intergenic | 30.0% | |
| CATCAGGAATCTGATAATTA+TGG | - | chr2_4:51988340-51988359 | None:intergenic | 30.0% | |
| !! | TGATGATTGTTTTGCTCATT+TGG | + | chr2_4:51988358-51988377 | Msa0333940:CDS | 30.0% |
| AAGACAATCTGAAGAAACAA+GGG | - | chr2_4:51991851-51991870 | None:intergenic | 30.0% | |
| !! | GATAGCAAACTTTTTCCCTT+GGG | - | chr2_4:51987417-51987436 | None:intergenic | 35.0% |
| !! | AGATAGCAAACTTTTTCCCT+TGG | - | chr2_4:51987418-51987437 | None:intergenic | 35.0% |
| AAAACTAACATGCTCTCACT+AGG | - | chr2_4:51987566-51987585 | None:intergenic | 35.0% | |
| !!! | GCATGTTAGTTTTGCAAATG+TGG | + | chr2_4:51987573-51987592 | Msa0333940:intron | 35.0% |
| ATGTTCTACCGATCTCAAAT+AGG | + | chr2_4:51987685-51987704 | Msa0333940:intron | 35.0% | |
| GGTCGTAAAGCAAATTGTAA+TGG | + | chr2_4:51987873-51987892 | Msa0333940:intron | 35.0% | |
| ! | GGCATTGTTTTCTATTTCCA+TGG | + | chr2_4:51987939-51987958 | Msa0333940:CDS | 35.0% |
| ! | TTTTCTATTTCCATGGAAGG+AGG | + | chr2_4:51987946-51987965 | Msa0333940:CDS | 35.0% |
| TGAATCCAAGTATAATCCCT+TGG | - | chr2_4:51988050-51988069 | None:intergenic | 35.0% | |
| ! | ATACTTGGATTCAAGCATTG+GGG | + | chr2_4:51988057-51988076 | Msa0333940:CDS | 35.0% |
| TCATCATCCCAAATTGATGA+TGG | - | chr2_4:51988122-51988141 | None:intergenic | 35.0% | |
| ! | CATTTGAAGCTCTCTTATGA+CGG | + | chr2_4:51988149-51988168 | Msa0333940:intron | 35.0% |
| !!! | GACTCTAAGTTGATTTTCCT+CGG | - | chr2_4:51988219-51988238 | None:intergenic | 35.0% |
| CAGATATTTCAGCAACTTCT+GGG | - | chr2_4:51988280-51988299 | None:intergenic | 35.0% | |
| ACAGATATTTCAGCAACTTC+TGG | - | chr2_4:51988281-51988300 | None:intergenic | 35.0% | |
| TGCTGAAATATCTGTCAATG+TGG | + | chr2_4:51988286-51988305 | Msa0333940:CDS | 35.0% | |
| TGAGCAAAACAATCATCATC+AGG | - | chr2_4:51988356-51988375 | None:intergenic | 35.0% | |
| GATGTGCAGTTCAAATTCTA+TGG | + | chr2_4:51988380-51988399 | Msa0333940:CDS | 35.0% | |
| ! | TCAGCCAGATTTTCAAAATC+CGG | + | chr2_4:51988442-51988461 | Msa0333940:CDS | 35.0% |
| !! | TTTGCCGGATTTTGAAAATC+TGG | - | chr2_4:51988449-51988468 | None:intergenic | 35.0% |
| AAGACAATCTGAAGATGCAA+GGG | - | chr2_4:51988525-51988544 | None:intergenic | 35.0% | |
| GGATATTGAGTATGGTATGA+TGG | + | chr2_4:51988589-51988608 | Msa0333940:CDS | 35.0% | |
| CGCTTATTCAAAAGGAAACA+TGG | - | chr2_4:51988823-51988842 | None:intergenic | 35.0% | |
| AACATGTTATGGGATGTACT+CGG | + | chr2_4:51988900-51988919 | Msa0333940:intron | 35.0% | |
| TATTGATACAAGCACAAGCA+TGG | + | chr2_4:51989040-51989059 | Msa0333940:intron | 35.0% | |
| ATTGATACAAGCACAAGCAT+GGG | + | chr2_4:51989041-51989060 | Msa0333940:intron | 35.0% | |
| !! | CTTTAGAATGCAACAACTCA+CGG | - | chr2_4:51989212-51989231 | None:intergenic | 35.0% |
| TAGGCTAAAATCAGCAACTT+TGG | + | chr2_4:51989312-51989331 | Msa0333940:intron | 35.0% | |
| TTTATTCTTCAGCGATACCT+CGG | - | chr2_4:51989350-51989369 | None:intergenic | 35.0% | |
| AGGGATAAAATAGCGAGAAT+AGG | + | chr2_4:51989473-51989492 | Msa0333940:intron | 35.0% | |
| TTATGGAAAGTTGCACACTA+TGG | - | chr2_4:51989707-51989726 | None:intergenic | 35.0% | |
| TATAACGTCACTAACCACAA+GGG | - | chr2_4:51989752-51989771 | None:intergenic | 35.0% | |
| TTATAACGTCACTAACCACA+AGG | - | chr2_4:51989753-51989772 | None:intergenic | 35.0% | |
| TGGTTAGTGACGTTATAAAC+AGG | + | chr2_4:51989755-51989774 | Msa0333940:intron | 35.0% | |
| AAGTCAAAGCTTAGTAGAAC+TGG | - | chr2_4:51989806-51989825 | None:intergenic | 35.0% | |
| TTAACTCGAAATTGGAAGGT+AGG | - | chr2_4:51989962-51989981 | None:intergenic | 35.0% | |
| CCACTCAATTAACTCGAAAT+TGG | - | chr2_4:51989970-51989989 | None:intergenic | 35.0% | |
| !! | CCAATTTCGAGTTAATTGAG+TGG | + | chr2_4:51989967-51989986 | Msa0333940:intron | 35.0% |
| !!! | GTAAGTTTTAGAAGAGGCTA+AGG | - | chr2_4:51990108-51990127 | None:intergenic | 35.0% |
| TGACTTTCAACCATGAAATG+TGG | - | chr2_4:51990395-51990414 | None:intergenic | 35.0% | |
| ! | GTTGACTTAGTGGTTTAGAA+TGG | - | chr2_4:51990444-51990463 | None:intergenic | 35.0% |
| !! | TTATGATAATGGTCGCAGTA+AGG | + | chr2_4:51990970-51990989 | Msa0333940:intron | 35.0% |
| !! | TATGATAATGGTCGCAGTAA+GGG | + | chr2_4:51990971-51990990 | Msa0333940:intron | 35.0% |
| CTTTGTGATCCTTGATATTG+CGG | + | chr2_4:51991003-51991022 | Msa0333940:intron | 35.0% | |
| !! | TATATAGTGGATATGAGAGC+AGG | + | chr2_4:51991178-51991197 | Msa0333940:intron | 35.0% |
| GGTCGTAAACCAAATTGTAA+TGG | + | chr2_4:51991199-51991218 | Msa0333940:intron | 35.0% | |
| AAACCAAATTGTAATGGTCG+TGG | + | chr2_4:51991205-51991224 | Msa0333940:CDS | 35.0% | |
| ! | TTGTTTTCTACTTCCATGGA+AGG | + | chr2_4:51991269-51991288 | Msa0333940:CDS | 35.0% |
| TGAATCCAAGTATAATCCCT+TGG | - | chr2_4:51988050-51988069 | None:intergenic | 35.0% | |
| ! | ATACTTGGATTCAAGCATTG+GGG | + | chr2_4:51988057-51988076 | Msa0333940:CDS | 35.0% |
| ! | CATTTGAAGCTCTCTTATGA+CGG | + | chr2_4:51988149-51988168 | Msa0333940:intron | 35.0% |
| !!! | GACTCTAAGTTGATTTTCCT+CGG | - | chr2_4:51988219-51988238 | None:intergenic | 35.0% |
| CAGATATTTCAGCAACTTCT+GGG | - | chr2_4:51988280-51988299 | None:intergenic | 35.0% | |
| ACAGATATTTCAGCAACTTC+TGG | - | chr2_4:51988281-51988300 | None:intergenic | 35.0% | |
| TGCTGAAATATCTGTCAATG+TGG | + | chr2_4:51988286-51988305 | Msa0333940:CDS | 35.0% | |
| TGAGCAAAACAATCATCATC+AGG | - | chr2_4:51988356-51988375 | None:intergenic | 35.0% | |
| GATGTGCAGTTCAAATTCTA+TGG | + | chr2_4:51988380-51988399 | Msa0333940:CDS | 35.0% | |
| ! | TCAGCCAGATTTTCAAAATC+CGG | + | chr2_4:51988442-51988461 | Msa0333940:CDS | 35.0% |
| !! | TTTGCCGGATTTTGAAAATC+TGG | - | chr2_4:51988449-51988468 | None:intergenic | 35.0% |
| CAAGACAATCTGAAGAAACA+AGG | - | chr2_4:51991852-51991871 | None:intergenic | 35.0% | |
| TTCTGTTAAAGATTCAGTGC+AGG | + | chr2_4:51991885-51991904 | Msa0333940:CDS | 35.0% | |
| GGAGATTGAATATGGTATGA+TGG | + | chr2_4:51991915-51991934 | Msa0333940:CDS | 35.0% | |
| TGAGAAAACAACGGCTCTTA+CGG | - | chr2_4:51987348-51987367 | None:intergenic | 40.0% | |
| ! | TTGCACTGAGTTTTGCACAT+AGG | - | chr2_4:51987454-51987473 | None:intergenic | 40.0% |
| AAATCAAACGAGAGACCTCT+CGG | - | chr2_4:51987624-51987643 | None:intergenic | 40.0% | |
| AAAGCAAATTGTAATGGCCG+CGG | + | chr2_4:51987879-51987898 | Msa0333940:CDS | 40.0% | |
| !! | ACGAGCATTGATTTGAAGGT+TGG | - | chr2_4:51988000-51988019 | None:intergenic | 40.0% |
| !! | TACTTGGATTCAAGCATTGG+GGG | + | chr2_4:51988058-51988077 | Msa0333940:CDS | 40.0% |
| AAGCCACACCATCATCAATT+TGG | + | chr2_4:51988111-51988130 | Msa0333940:intron | 40.0% | |
| AGCCACACCATCATCAATTT+GGG | + | chr2_4:51988112-51988131 | Msa0333940:intron | 40.0% | |
| !! | ATCCCAAATTGATGATGGTG+TGG | - | chr2_4:51988117-51988136 | None:intergenic | 40.0% |
| CGTCATAAGAGAGCTTCAAA+TGG | - | chr2_4:51988151-51988170 | None:intergenic | 40.0% | |
| GAGAGAACATCGAATGAGAA+CGG | + | chr2_4:51988239-51988258 | Msa0333940:CDS | 40.0% | |
| GGTTTATCGTCCAAAGTTGA+AGG | + | chr2_4:51988401-51988420 | Msa0333940:intron | 40.0% | |
| TCCAAAGTTGAAGGAGTTCT+TGG | + | chr2_4:51988410-51988429 | Msa0333940:intron | 40.0% | |
| TCCAAGAACTCCTTCAACTT+TGG | - | chr2_4:51988414-51988433 | None:intergenic | 40.0% | |
| CAAGACAATCTGAAGATGCA+AGG | - | chr2_4:51988526-51988545 | None:intergenic | 40.0% | |
| TTCTGCTAAAGATTCAGTGC+AGG | + | chr2_4:51988559-51988578 | Msa0333940:CDS | 40.0% | |
| ! | GAAGGCATGGATATTGAGTA+TGG | + | chr2_4:51988581-51988600 | Msa0333940:CDS | 40.0% |
| !! | TATGGTATGATGGATTGCAC+TGG | + | chr2_4:51988599-51988618 | Msa0333940:CDS | 40.0% |
| AGAGCAAGGTTGTACTCATT+CGG | - | chr2_4:51989107-51989126 | None:intergenic | 40.0% | |
| CTGAAACTGCATTTAACTGC+CGG | + | chr2_4:51989250-51989269 | Msa0333940:intron | 40.0% | |
| TGAAACTGCATTTAACTGCC+GGG | + | chr2_4:51989251-51989270 | Msa0333940:intron | 40.0% | |
| CTGCACTCAATCAGATTCAT+GGG | - | chr2_4:51989279-51989298 | None:intergenic | 40.0% | |
| !! | GATTTTAGCCTATCCAAAGC+CGG | - | chr2_4:51989304-51989323 | None:intergenic | 40.0% |
| ! | GTAAGCCATGTCATTTCAGT+CGG | - | chr2_4:51989570-51989589 | None:intergenic | 40.0% |
| TTACAATGTCTAGTCCCGTT+CGG | + | chr2_4:51989586-51989605 | Msa0333940:intron | 40.0% | |
| CACACTATGGACCTTATCAA+CGG | - | chr2_4:51989694-51989713 | None:intergenic | 40.0% | |
| ! | GAGTACGGACACATGTTTTA+TGG | - | chr2_4:51989724-51989743 | None:intergenic | 40.0% |
| ATAACGTCACTAACCACAAG+GGG | - | chr2_4:51989751-51989770 | None:intergenic | 40.0% | |
| ACGTTATAAACAGGCAGCAT+GGG | + | chr2_4:51989764-51989783 | Msa0333940:intron | 40.0% | |
| ATTGGAAGGTAGGTGATTAG+AGG | - | chr2_4:51989952-51989971 | None:intergenic | 40.0% | |
| TTACCGAAAGCCACATTTCA+TGG | + | chr2_4:51990382-51990401 | Msa0333940:intron | 40.0% | |
| CAACCATGAAATGTGGCTTT+CGG | - | chr2_4:51990388-51990407 | None:intergenic | 40.0% | |
| TGAGAAAACAACGGCTCTTA+CGG | - | chr2_4:51987348-51987367 | None:intergenic | 40.0% | |
| !! | ATCTTGAAGGGCACTGAATA+GGG | - | chr2_4:51990813-51990832 | None:intergenic | 40.0% |
| !!! | ACTTTGTGTTTTGGGTTAGC+AGG | - | chr2_4:51990838-51990857 | None:intergenic | 40.0% |
| TCATGGTCAAATGTGACTGA+TGG | + | chr2_4:51991030-51991049 | Msa0333940:intron | 40.0% | |
| ATAAGCAATGTGACCGCAAT+CGG | - | chr2_4:51991060-51991079 | None:intergenic | 40.0% | |
| GATCCACGACCATTACAATT+TGG | - | chr2_4:51991211-51991230 | None:intergenic | 40.0% | |
| ! | GGCATTGTTTTCTACTTCCA+TGG | + | chr2_4:51991265-51991284 | Msa0333940:CDS | 40.0% |
| ! | TTTTCTACTTCCATGGAAGG+AGG | + | chr2_4:51991272-51991291 | Msa0333940:CDS | 40.0% |
| !! | TACTTGGATTCAAGCATTGG+GGG | + | chr2_4:51988058-51988077 | Msa0333940:CDS | 40.0% |
| AAGCCACACCATCATCAATT+TGG | + | chr2_4:51988111-51988130 | Msa0333940:intron | 40.0% | |
| AGCCACACCATCATCAATTT+GGG | + | chr2_4:51988112-51988131 | Msa0333940:intron | 40.0% | |
| !! | ATCCCAAATTGATGATGGTG+TGG | - | chr2_4:51988117-51988136 | None:intergenic | 40.0% |
| TCGTCATCCCAAATTGATGA+TGG | - | chr2_4:51991448-51991467 | None:intergenic | 40.0% | |
| CGTCATAAGAGAGCTTCAAA+TGG | - | chr2_4:51988151-51988170 | None:intergenic | 40.0% | |
| GAGAGAACATCGAATGAGAA+CGG | + | chr2_4:51988239-51988258 | Msa0333940:CDS | 40.0% | |
| GGTTTATCGTCCAAAGTTGA+AGG | + | chr2_4:51988401-51988420 | Msa0333940:intron | 40.0% | |
| TCCAAAGTTGAAGGAGTTCT+TGG | + | chr2_4:51988410-51988429 | Msa0333940:intron | 40.0% | |
| TCCAAGAACTCCTTCAACTT+TGG | - | chr2_4:51988414-51988433 | None:intergenic | 40.0% | |
| ATCTGAAGAAACAAGGGATG+TGG | - | chr2_4:51991845-51991864 | None:intergenic | 40.0% | |
| GTTAAAGATTCAGTGCAGGA+AGG | + | chr2_4:51991889-51991908 | Msa0333940:CDS | 40.0% | |
| GAAGGCTTGGAGATTGAATA+TGG | + | chr2_4:51991907-51991926 | Msa0333940:CDS | 40.0% | |
| !! | TATGGTATGATGGATTGCAC+TGG | + | chr2_4:51988599-51988618 | Msa0333940:CDS | 40.0% |
| AACTATACCATTACCACTGC+TGG | - | chr2_4:51988630-51988649 | None:intergenic | 40.0% | |
| AAAACAACGGCTCTTACGGT+TGG | - | chr2_4:51987344-51987363 | None:intergenic | 45.0% | |
| GATCTTGAAGGACATTGAGC+AGG | - | chr2_4:51987385-51987404 | None:intergenic | 45.0% | |
| AAGATCACCAGCTAACCCAA+GGG | + | chr2_4:51987399-51987418 | Msa0333940:CDS | 45.0% | |
| !!! | ACTTTTTCCCTTGGGTTAGC+TGG | - | chr2_4:51987409-51987428 | None:intergenic | 45.0% |
| CAAAGATACTCGTTACCGAG+AGG | + | chr2_4:51987606-51987625 | Msa0333940:intron | 45.0% | |
| AATGCTCATTCCTCCTTCCA+TGG | - | chr2_4:51987959-51987978 | None:intergenic | 45.0% | |
| GAGGAATGAGCATTTCAGCT+TGG | + | chr2_4:51987965-51987984 | Msa0333940:CDS | 45.0% | |
| ! | ATGCTCGTTTTATCGGCCTT+AGG | + | chr2_4:51988012-51988031 | Msa0333940:CDS | 45.0% |
| GGAGACCAAGGGATTATACT+TGG | + | chr2_4:51988042-51988061 | Msa0333940:CDS | 45.0% | |
| ! | GAAGCTCTCTTATGACGGAA+AGG | + | chr2_4:51988154-51988173 | Msa0333940:intron | 45.0% |
| AAGGATCTCGTAATCCCTGA+AGG | + | chr2_4:51988173-51988192 | Msa0333940:CDS | 45.0% | |
| ! | ATCGAATGAGAACGGTGTCA+TGG | + | chr2_4:51988247-51988266 | Msa0333940:CDS | 45.0% |
| ATGGATTCTACTGTCCTCCT+TGG | - | chr2_4:51988321-51988340 | None:intergenic | 45.0% | |
| TTTCAAAATCCGGCAAAGCC+AGG | + | chr2_4:51988452-51988471 | Msa0333940:CDS | 45.0% | |
| ATCTGAAGATGCAAGGGATG+TGG | - | chr2_4:51988519-51988538 | None:intergenic | 45.0% | |
| GCTAAAGATTCAGTGCAGGA+AGG | + | chr2_4:51988563-51988582 | Msa0333940:CDS | 45.0% | |
| ! | TGTTTGTGGGTTGTACTCAG+TGG | + | chr2_4:51988722-51988741 | Msa0333940:intron | 45.0% |
| ATGTTATGGGATGTACTCGG+TGG | + | chr2_4:51988903-51988922 | Msa0333940:intron | 45.0% | |
| ! | GATGTACTCGGTGGACAAAA+TGG | + | chr2_4:51988912-51988931 | Msa0333940:intron | 45.0% |
| TGAGTACAACCTTGCTCTCT+AGG | + | chr2_4:51989109-51989128 | Msa0333940:intron | 45.0% | |
| ! | TACAACCTTGCTCTCTAGGA+AGG | + | chr2_4:51989113-51989132 | Msa0333940:intron | 45.0% |
| ! | TGAAGTGCTATGCACAAGAC+CGG | - | chr2_4:51989152-51989171 | None:intergenic | 45.0% |
| GCAACAACTCACGGAGAAAT+TGG | - | chr2_4:51989203-51989222 | None:intergenic | 45.0% | |
| CCTGCACTCAATCAGATTCA+TGG | - | chr2_4:51989280-51989299 | None:intergenic | 45.0% | |
| CCATGAATCTGATTGAGTGC+AGG | + | chr2_4:51989277-51989296 | Msa0333940:intron | 45.0% | |
| AATCTGATTGAGTGCAGGAC+CGG | + | chr2_4:51989282-51989301 | Msa0333940:intron | 45.0% | |
| TTTGGCAACAAAGTTAGCCG+AGG | + | chr2_4:51989330-51989349 | Msa0333940:intron | 45.0% | |
| ! | TCATGCCGACTGAAATGACA+TGG | + | chr2_4:51989562-51989581 | Msa0333940:intron | 45.0% |
| TACCCACAGAAATAGCCGAA+CGG | - | chr2_4:51989604-51989623 | None:intergenic | 45.0% | |
| !! | GTGTTTGTTTTCCCTCGTTG+AGG | + | chr2_4:51989626-51989645 | Msa0333940:intron | 45.0% |
| TGCTATGATCACCTCAACGA+GGG | - | chr2_4:51989640-51989659 | None:intergenic | 45.0% | |
| TGATCATAGCACCCCACTTT+CGG | + | chr2_4:51989649-51989668 | Msa0333940:intron | 45.0% | |
| ATGAAATGCAGCCGAAAGTG+GGG | - | chr2_4:51989663-51989682 | None:intergenic | 45.0% | |
| CATGAAATGCAGCCGAAAGT+GGG | - | chr2_4:51989664-51989683 | None:intergenic | 45.0% | |
| CATGGCATGATCCGTTGATA+AGG | + | chr2_4:51989680-51989699 | Msa0333940:intron | 45.0% | |
| GACGTTATAAACAGGCAGCA+TGG | + | chr2_4:51989763-51989782 | Msa0333940:intron | 45.0% | |
| CTTTGACTACACGCACGTAT+TGG | + | chr2_4:51989836-51989855 | Msa0333940:intron | 45.0% | |
| AGGCTATATCAGCCGAACTA+TGG | - | chr2_4:51989890-51989909 | None:intergenic | 45.0% | |
| ACGTGAGTGAGATGAATTGC+TGG | - | chr2_4:51990528-51990547 | None:intergenic | 45.0% | |
| AAAACAACGGCTCTTACGGT+TGG | - | chr2_4:51987344-51987363 | None:intergenic | 45.0% | |
| !! | GATCTTGAAGGGCACTGAAT+AGG | - | chr2_4:51990814-51990833 | None:intergenic | 45.0% |
| GGTTAGCAGGTGATCTTGAA+GGG | - | chr2_4:51990825-51990844 | None:intergenic | 45.0% | |
| ! | TTGCACTGAGTTTTGCACAC+AGG | - | chr2_4:51990883-51990902 | None:intergenic | 45.0% |
| CATGACTCTCCGCAATATCA+AGG | - | chr2_4:51991015-51991034 | None:intergenic | 45.0% | |
| CTTGATATTGCGGAGAGTCA+TGG | + | chr2_4:51991013-51991032 | Msa0333940:intron | 45.0% | |
| TAAGCAATGTGACCGCAATC+GGG | - | chr2_4:51991059-51991078 | None:intergenic | 45.0% | |
| ! | ATGCTCGTTTTATCGGCCTT+AGG | + | chr2_4:51988012-51988031 | Msa0333940:CDS | 45.0% |
| GGAGACCAAGGGATTATACT+TGG | + | chr2_4:51988042-51988061 | Msa0333940:CDS | 45.0% | |
| ! | GAAGCTCTCTTATGACGGAA+AGG | + | chr2_4:51988154-51988173 | Msa0333940:intron | 45.0% |
| AAGGATCTCGTAATCCCTGA+AGG | + | chr2_4:51988173-51988192 | Msa0333940:CDS | 45.0% | |
| ATGTAGAGAGGTGACCTTCA+GGG | - | chr2_4:51991516-51991535 | None:intergenic | 45.0% | |
| ! | ATCGAATGAGAACGGTGTCA+TGG | + | chr2_4:51988247-51988266 | Msa0333940:CDS | 45.0% |
| ATGGATTCTACTGTCCTCCT+TGG | - | chr2_4:51988321-51988340 | None:intergenic | 45.0% | |
| TTTCAAAATCCGGCAAAGCC+AGG | + | chr2_4:51988452-51988471 | Msa0333940:CDS | 45.0% | |
| GAAGGACATTGAGCAGGACA+AGG | - | chr2_4:51987379-51987398 | None:intergenic | 50.0% | |
| !! | GGGTTAGCTGGTGATCTTGA+AGG | - | chr2_4:51987397-51987416 | None:intergenic | 50.0% |
| CAAGATCACCAGCTAACCCA+AGG | + | chr2_4:51987398-51987417 | Msa0333940:CDS | 50.0% | |
| TAATCCCTTGGTCTCCCTAG+CGG | - | chr2_4:51988038-51988057 | None:intergenic | 50.0% | |
| ! | ATTTTCCTCGGATTGCCACG+TGG | - | chr2_4:51988207-51988226 | None:intergenic | 50.0% |
| TGGCAATGCCAGTAGTTGGA+GGG | + | chr2_4:51988477-51988496 | Msa0333940:CDS | 50.0% | |
| TTGTCTTCCCCTCCAACTAC+TGG | - | chr2_4:51988488-51988507 | None:intergenic | 50.0% | |
| AGATTCAGTGCAGGAAGGCA+TGG | + | chr2_4:51988568-51988587 | Msa0333940:CDS | 50.0% | |
| !! | GGTATGATGGATTGCACTGG+TGG | + | chr2_4:51988602-51988621 | Msa0333940:CDS | 50.0% |
| ! | CTTGCTCTCTAGGAAGGACA+GGG | + | chr2_4:51989119-51989138 | Msa0333940:intron | 50.0% |
| ! | CGTAGAGCGCTAAGTTCAGT+TGG | + | chr2_4:51989408-51989427 | Msa0333940:intron | 50.0% |
| !! | TCCCGTTCGGCTATTTCTGT+GGG | + | chr2_4:51989599-51989618 | Msa0333940:intron | 50.0% |
| ACCCACAGAAATAGCCGAAC+GGG | - | chr2_4:51989603-51989622 | None:intergenic | 50.0% | |
| GTGCTATGATCACCTCAACG+AGG | - | chr2_4:51989641-51989660 | None:intergenic | 50.0% | |
| CCATGAAATGCAGCCGAAAG+TGG | - | chr2_4:51989665-51989684 | None:intergenic | 50.0% | |
| CCACTTTCGGCTGCATTTCA+TGG | + | chr2_4:51989662-51989681 | Msa0333940:intron | 50.0% | |
| GCCTTCGCTTAACATTCCCT+CGG | + | chr2_4:51989906-51989925 | Msa0333940:intron | 50.0% | |
| ! | GGGTTAGCAGGTGATCTTGA+AGG | - | chr2_4:51990826-51990845 | None:intergenic | 50.0% |
| AAGCAATGTGACCGCAATCG+GGG | - | chr2_4:51991058-51991077 | None:intergenic | 50.0% | |
| AGTGCTCATTCCTCCTTCCA+TGG | - | chr2_4:51991285-51991304 | None:intergenic | 50.0% | |
| TAATCCCTTGGTCTCCCTTG+CGG | - | chr2_4:51991364-51991383 | None:intergenic | 50.0% | |
| CATGTAGAGAGGTGACCTTC+AGG | - | chr2_4:51991517-51991536 | None:intergenic | 50.0% | |
| CTGAAGGTCACCTCTCTACA+TGG | + | chr2_4:51991515-51991534 | Msa0333940:CDS | 50.0% | |
| TTGTCTTCCCCTCCAATGAC+CGG | - | chr2_4:51991814-51991833 | None:intergenic | 50.0% | |
| AGATTCAGTGCAGGAAGGCT+TGG | + | chr2_4:51991894-51991913 | Msa0333940:CDS | 50.0% | |
| !! | GGTATGATGGATTGCACTGG+TGG | + | chr2_4:51988602-51988621 | Msa0333940:CDS | 50.0% |
| TGCTTGGACCCTCGTTTCGT+TGG | + | chr2_4:51987909-51987928 | Msa0333940:CDS | 55.0% | |
| CATCCGCACCAACGAAACGA+GGG | - | chr2_4:51987920-51987939 | None:intergenic | 55.0% | |
| TTTATCGGCCTTAGGCCGCT+AGG | + | chr2_4:51988020-51988039 | Msa0333940:CDS | 55.0% | |
| TTATCGGCCTTAGGCCGCTA+GGG | + | chr2_4:51988021-51988040 | Msa0333940:CDS | 55.0% | |
| ACGTGGAGAGGTGACCTTCA+GGG | - | chr2_4:51988190-51988209 | None:intergenic | 55.0% | |
| CAATGTGGTGCCTGTCACCA+AGG | + | chr2_4:51988301-51988320 | Msa0333940:CDS | 55.0% | |
| ! | CTACTGTCCTCCTTGGTGAC+AGG | - | chr2_4:51988314-51988333 | None:intergenic | 55.0% |
| GTGGCAATGCCAGTAGTTGG+AGG | + | chr2_4:51988476-51988495 | Msa0333940:CDS | 55.0% | |
| GGCAATGCCAGTAGTTGGAG+GGG | + | chr2_4:51988478-51988497 | Msa0333940:CDS | 55.0% | |
| ! | GGTGGTGCTAGCAGTGGTAA+TGG | + | chr2_4:51988620-51988639 | Msa0333940:CDS | 55.0% |
| CCTGTCCTTCCTAGAGAGCA+AGG | - | chr2_4:51989121-51989140 | None:intergenic | 55.0% | |
| ! | CCTTGCTCTCTAGGAAGGAC+AGG | + | chr2_4:51989118-51989137 | Msa0333940:intron | 55.0% |
| CAATCAGATTCATGGGCGCC+CGG | - | chr2_4:51989272-51989291 | None:intergenic | 55.0% | |
| ! | ATTGAGTGCAGGACCGGCTT+TGG | + | chr2_4:51989288-51989307 | Msa0333940:intron | 55.0% |
| !! | GTCCCGTTCGGCTATTTCTG+TGG | + | chr2_4:51989598-51989617 | Msa0333940:intron | 55.0% |
| ACCACAAGGGGCGATGAGTA+CGG | - | chr2_4:51989739-51989758 | None:intergenic | 55.0% | |
| GCCGAGGGAATGTTAAGCGA+AGG | - | chr2_4:51989910-51989929 | None:intergenic | 55.0% | |
| TCGCTTAACATTCCCTCGGC+TGG | + | chr2_4:51989910-51989929 | Msa0333940:intron | 55.0% | |
| CGCTTAACATTCCCTCGGCT+GGG | + | chr2_4:51989911-51989930 | Msa0333940:intron | 55.0% | |
| TTAACATTCCCTCGGCTGGG+AGG | + | chr2_4:51989914-51989933 | Msa0333940:intron | 55.0% | |
| GACTGATGGAACCCCGATTG+CGG | + | chr2_4:51991044-51991063 | Msa0333940:intron | 55.0% | |
| TGGTCGTGGATCTGCATGCT+TGG | + | chr2_4:51991219-51991238 | Msa0333940:CDS | 55.0% | |
| GATCTGCATGCTTGGACCCT+CGG | + | chr2_4:51991227-51991246 | Msa0333940:CDS | 55.0% | |
| TTTATCGGCCTTAGGCCGCA+AGG | + | chr2_4:51991346-51991365 | Msa0333940:CDS | 55.0% | |
| TTATCGGCCTTAGGCCGCAA+GGG | + | chr2_4:51991347-51991366 | Msa0333940:CDS | 55.0% | |
| CCTCGGATTGCCATGTAGAG+AGG | - | chr2_4:51991528-51991547 | None:intergenic | 55.0% | |
| CCTCTCTACATGGCAATCCG+AGG | + | chr2_4:51991525-51991544 | Msa0333940:CDS | 55.0% | |
| CAATGTGGTGCCTGTCACCA+AGG | + | chr2_4:51988301-51988320 | Msa0333940:CDS | 55.0% | |
| ! | CTACTGTCCTCCTTGGTGAC+AGG | - | chr2_4:51988314-51988333 | None:intergenic | 55.0% |
| TGGCAATGCCGGTCATTGGA+GGG | + | chr2_4:51991803-51991822 | Msa0333940:CDS | 55.0% | |
| GGACCCTCGTTTCGTTGGTG+CGG | + | chr2_4:51987914-51987933 | Msa0333940:CDS | 60.0% | |
| CCATCCGCACCAACGAAACG+AGG | - | chr2_4:51987921-51987940 | None:intergenic | 60.0% | |
| CCTCGTTTCGTTGGTGCGGA+TGG | + | chr2_4:51987918-51987937 | Msa0333940:CDS | 60.0% | |
| TTGGTCTCCCTAGCGGCCTA+AGG | - | chr2_4:51988031-51988050 | None:intergenic | 60.0% | |
| TTAGGCCGCTAGGGAGACCA+AGG | + | chr2_4:51988030-51988049 | Msa0333940:CDS | 60.0% | |
| TAGGCCGCTAGGGAGACCAA+GGG | + | chr2_4:51988031-51988050 | Msa0333940:CDS | 60.0% | |
| CACGTGGAGAGGTGACCTTC+AGG | - | chr2_4:51988191-51988210 | None:intergenic | 60.0% | |
| CTGAAGGTCACCTCTCCACG+TGG | + | chr2_4:51988189-51988208 | Msa0333940:CDS | 60.0% | |
| TGTGGTGCCTGTCACCAAGG+AGG | + | chr2_4:51988304-51988323 | Msa0333940:CDS | 60.0% | |
| AAATCCGGCAAAGCCAGGCG+TGG | + | chr2_4:51988457-51988476 | Msa0333940:CDS | 60.0% | |
| !! | ATTGCCACGCCTGGCTTTGC+CGG | - | chr2_4:51988464-51988483 | None:intergenic | 60.0% |
| ACTACTGGCATTGCCACGCC+TGG | - | chr2_4:51988473-51988492 | None:intergenic | 60.0% | |
| GGCGTGGCAATGCCAGTAGT+TGG | + | chr2_4:51988473-51988492 | Msa0333940:CDS | 60.0% | |
| ! | TGCACTGGTGGTGCTAGCAG+TGG | + | chr2_4:51988614-51988633 | Msa0333940:CDS | 60.0% |
| GGAAGGACAGGGTTCAACGC+CGG | + | chr2_4:51989130-51989149 | Msa0333940:intron | 60.0% | |
| !! | GTGCAGGACCGGCTTTGGAT+AGG | + | chr2_4:51989293-51989312 | Msa0333940:intron | 60.0% |
| TCCGTACTCATCGCCCCTTG+TGG | + | chr2_4:51989735-51989754 | Msa0333940:intron | 60.0% | |
| ACGAGTTTCCTCCCAGCCGA+GGG | - | chr2_4:51989925-51989944 | None:intergenic | 60.0% | |
| ! | TGCTTGGACCCTCGGTTCGT+TGG | + | chr2_4:51991235-51991254 | Msa0333940:CDS | 60.0% |
| CATCCGCACCAACGAACCGA+GGG | - | chr2_4:51991246-51991265 | None:intergenic | 60.0% | |
| TTGGTCTCCCTTGCGGCCTA+AGG | - | chr2_4:51991357-51991376 | None:intergenic | 60.0% | |
| TTAGGCCGCAAGGGAGACCA+AGG | + | chr2_4:51991356-51991375 | Msa0333940:CDS | 60.0% | |
| TAGGCCGCAAGGGAGACCAA+GGG | + | chr2_4:51991357-51991376 | Msa0333940:CDS | 60.0% | |
| TGTGGTGCCTGTCACCAAGG+AGG | + | chr2_4:51988304-51988323 | Msa0333940:CDS | 60.0% | |
| AAATCCGGCAAAGCCAGGCG+TGG | + | chr2_4:51988457-51988476 | Msa0333940:CDS | 60.0% | |
| !! | ATTGCCACGCCTGGCTTTGC+CGG | - | chr2_4:51988464-51988483 | None:intergenic | 60.0% |
| AAAGCCAGGCGTGGCAATGC+CGG | + | chr2_4:51988466-51988485 | Msa0333940:CDS | 60.0% | |
| GTGGCAATGCCGGTCATTGG+AGG | + | chr2_4:51991802-51991821 | Msa0333940:CDS | 60.0% | |
| GGCAATGCCGGTCATTGGAG+GGG | + | chr2_4:51991804-51991823 | Msa0333940:CDS | 60.0% | |
| ! | GGTGGTGCCAGCAGTGGTAA+TGG | + | chr2_4:51991946-51991965 | Msa0333940:CDS | 60.0% |
| GGTCCAAGCACGCAGATCCG+CGG | - | chr2_4:51987899-51987918 | None:intergenic | 65.0% | |
| CCTCGGATTGCCACGTGGAG+AGG | - | chr2_4:51988202-51988221 | None:intergenic | 65.0% | |
| CCTCTCCACGTGGCAATCCG+AGG | + | chr2_4:51988199-51988218 | Msa0333940:CDS | 65.0% | |
| GACGAGTTTCCTCCCAGCCG+AGG | - | chr2_4:51989926-51989945 | None:intergenic | 65.0% | |
| ! | GGACCCTCGGTTCGTTGGTG+CGG | + | chr2_4:51991240-51991259 | Msa0333940:CDS | 65.0% |
| CCATCCGCACCAACGAACCG+AGG | - | chr2_4:51991247-51991266 | None:intergenic | 65.0% | |
| ! | CCTCGGTTCGTTGGTGCGGA+TGG | + | chr2_4:51991244-51991263 | Msa0333940:CDS | 65.0% |
| ATGACCGGCATTGCCACGCC+TGG | - | chr2_4:51991799-51991818 | None:intergenic | 65.0% | |
| GGCGTGGCAATGCCGGTCAT+TGG | + | chr2_4:51991799-51991818 | Msa0333940:CDS | 65.0% | |
| ! | TGCACTGGTGGTGCCAGCAG+TGG | + | chr2_4:51991940-51991959 | Msa0333940:CDS | 65.0% |
| TGGCCGCGGATCTGCGTGCT+TGG | + | chr2_4:51987893-51987912 | Msa0333940:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 51987238 | 51991987 | 51987238 | ID=Msa0333940;Name=Msa0333940 |
| chr2_4 | mRNA | 51987238 | 51991987 | 51987238 | ID=Msa0333940-mRNA-1;Parent=Msa0333940;Name=Msa0333940-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0.2|0.16|6|0|601 |
| chr2_4 | exon | 51987238 | 51987475 | 51987238 | ID=Msa0333940-mRNA-1:exon:15651;Parent=Msa0333940-mRNA-1 |
| chr2_4 | exon | 51987874 | 51988079 | 51987874 | ID=Msa0333940-mRNA-1:exon:15652;Parent=Msa0333940-mRNA-1 |
| chr2_4 | exon | 51988158 | 51988401 | 51988158 | ID=Msa0333940-mRNA-1:exon:15653;Parent=Msa0333940-mRNA-1 |
| chr2_4 | exon | 51988423 | 51988646 | 51988423 | ID=Msa0333940-mRNA-1:exon:15654;Parent=Msa0333940-mRNA-1 |
| chr2_4 | exon | 51990799 | 51990904 | 51990799 | ID=Msa0333940-mRNA-1:exon:15655;Parent=Msa0333940-mRNA-1 |
| chr2_4 | exon | 51991200 | 51991987 | 51991200 | ID=Msa0333940-mRNA-1:exon:15656;Parent=Msa0333940-mRNA-1 |
| chr2_4 | CDS | 51987238 | 51987475 | 51987238 | ID=Msa0333940-mRNA-1:cds;Parent=Msa0333940-mRNA-1 |
| chr2_4 | CDS | 51987874 | 51988079 | 51987874 | ID=Msa0333940-mRNA-1:cds;Parent=Msa0333940-mRNA-1 |
| chr2_4 | CDS | 51988158 | 51988401 | 51988158 | ID=Msa0333940-mRNA-1:cds;Parent=Msa0333940-mRNA-1 |
| chr2_4 | CDS | 51988423 | 51988646 | 51988423 | ID=Msa0333940-mRNA-1:cds;Parent=Msa0333940-mRNA-1 |
| chr2_4 | CDS | 51990799 | 51990904 | 51990799 | ID=Msa0333940-mRNA-1:cds;Parent=Msa0333940-mRNA-1 |
| chr2_4 | CDS | 51991200 | 51991987 | 51991200 | ID=Msa0333940-mRNA-1:cds;Parent=Msa0333940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
