Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334050 | KAG5546319.1 | 63.535 | 628 | 170 | 6 | 33 | 601 | 30 | 657 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012780 | Msa0334050 | 0.825642 | 4.194022e-54 | -8.615850e-47 |
| Msa0012790 | Msa0334050 | 0.828501 | 8.679951e-55 | -8.615850e-47 |
| Msa0012820 | Msa0334050 | 0.827365 | 1.628980e-54 | -8.615850e-47 |
| Msa0045850 | Msa0334050 | 0.827562 | 1.461232e-54 | -8.615850e-47 |
| Msa0046240 | Msa0334050 | 0.805015 | 1.636723e-49 | -8.615850e-47 |
| Msa0048950 | Msa0334050 | 0.813098 | 3.039543e-51 | -8.615850e-47 |
| Msa0059880 | Msa0334050 | 0.821436 | 4.040777e-53 | -8.615850e-47 |
| Msa0061590 | Msa0334050 | 0.815320 | 9.821419e-52 | -8.615850e-47 |
| Msa0061600 | Msa0334050 | 0.848124 | 7.484816e-60 | -8.615850e-47 |
| Msa0106110 | Msa0334050 | 0.829385 | 5.303319e-55 | -8.615850e-47 |
| Msa0106120 | Msa0334050 | 0.821801 | 3.327573e-53 | -8.615850e-47 |
| Msa0106130 | Msa0334050 | 0.835077 | 2.070232e-56 | -8.615850e-47 |
| Msa0139460 | Msa0334050 | 0.845439 | 4.058689e-59 | -8.615850e-47 |
| Msa0150910 | Msa0334050 | 0.819973 | 8.765095e-53 | -8.615850e-47 |
| Msa0152640 | Msa0334050 | 0.819712 | 1.005496e-52 | -8.615850e-47 |
| Msa0152660 | Msa0334050 | 0.820784 | 5.711426e-53 | -8.615850e-47 |
| Msa0152740 | Msa0334050 | 0.825411 | 4.758066e-54 | -8.615850e-47 |
| Msa0190670 | Msa0334050 | 0.804637 | 1.963378e-49 | -8.615850e-47 |
| Msa0194230 | Msa0334050 | 0.800624 | 1.320538e-48 | -8.615850e-47 |
| Msa0196260 | Msa0334050 | 0.805100 | 1.571475e-49 | -8.615850e-47 |
| Msa0216760 | Msa0334050 | 0.870932 | 1.003847e-66 | -8.615850e-47 |
| Msa0225910 | Msa0334050 | 0.811882 | 5.604028e-51 | -8.615850e-47 |
| Msa0274250 | Msa0334050 | 0.810740 | 9.917863e-51 | -8.615850e-47 |
| Msa0278950 | Msa0334050 | 0.815076 | 1.112364e-51 | -8.615850e-47 |
| Msa0295980 | Msa0334050 | 0.915342 | 6.599273e-85 | -8.615850e-47 |
| Msa0314440 | Msa0334050 | 0.803640 | 3.165500e-49 | -8.615850e-47 |
| Msa0333940 | Msa0334050 | 0.960495 | 1.271982e-118 | -8.615850e-47 |
| Msa0334050 | Msa0341110 | 0.800501 | 1.399264e-48 | -8.615850e-47 |
| Msa0334050 | Msa0374130 | 0.817094 | 3.941806e-52 | -8.615850e-47 |
| Msa0334050 | Msa0469550 | 0.842245 | 2.908826e-58 | -8.615850e-47 |
| Msa0334050 | Msa0515260 | 0.842412 | 2.626591e-58 | -8.615850e-47 |
| Msa0334050 | Msa0548760 | 0.825021 | 5.880902e-54 | -8.615850e-47 |
| Msa0334050 | Msa0548770 | 0.801634 | 8.207696e-49 | -8.615850e-47 |
| Msa0334050 | Msa0548970 | 0.838000 | 3.727761e-57 | -8.615850e-47 |
| Msa0334050 | Msa0584970 | 0.817804 | 2.726491e-52 | -8.615850e-47 |
| Msa0334050 | Msa0605410 | 0.826934 | 2.065491e-54 | -8.615850e-47 |
| Msa0334050 | Msa0645060 | 0.813192 | 2.899032e-51 | -8.615850e-47 |
| Msa0334050 | Msa0645120 | 0.813552 | 2.415430e-51 | -8.615850e-47 |
| Msa0334050 | Msa0676140 | 0.816475 | 5.426310e-52 | -8.615850e-47 |
| Msa0334050 | Msa0676190 | 0.831336 | 1.768466e-55 | -8.615850e-47 |
| Msa0334050 | Msa0678620 | 0.816950 | 4.245089e-52 | -8.615850e-47 |
| Msa0334050 | Msa0684560 | 0.833216 | 6.058058e-56 | -8.615850e-47 |
| Msa0334050 | Msa0684590 | 0.802654 | 5.062299e-49 | -8.615850e-47 |
| Msa0334050 | Msa0684600 | 0.805248 | 1.463151e-49 | -8.615850e-47 |
| Msa0334050 | Msa0684720 | 0.847751 | 9.482036e-60 | -8.615850e-47 |
| Msa0334050 | Msa0777070 | 0.819204 | 1.312813e-52 | -8.615850e-47 |
| Msa0334050 | Msa0787860 | 0.801948 | 7.074818e-49 | -8.615850e-47 |
| Msa0334050 | Msa0814160 | 0.800189 | 1.619265e-48 | -8.615850e-47 |
| Msa0334050 | Msa0854840 | 0.830578 | 2.713742e-55 | -8.615850e-47 |
| Msa0334050 | Msa0864160 | 0.803927 | 2.759091e-49 | -8.615850e-47 |
| Msa0334050 | Msa0882880 | 0.800413 | 1.458177e-48 | -8.615850e-47 |
| Msa0334050 | Msa0883640 | 0.844206 | 8.725178e-59 | -8.615850e-47 |
| Msa0334050 | Msa0902340 | 0.803943 | 2.738648e-49 | -8.615850e-47 |
| Msa0334050 | Msa0910830 | 0.845864 | 3.112487e-59 | -8.615850e-47 |
| Msa0334050 | Msa0924490 | 0.808069 | 3.712493e-50 | -8.615850e-47 |
| Msa0334050 | Msa0948050 | 0.803985 | 2.684247e-49 | -8.615850e-47 |
| Msa0334050 | Msa0960090 | 0.844977 | 5.410929e-59 | -8.615850e-47 |
| Msa0334050 | Msa0967820 | 0.830865 | 2.308008e-55 | -8.615850e-47 |
| Msa0334050 | Msa0985700 | 0.843380 | 1.451978e-58 | -8.615850e-47 |
| Msa0334050 | Msa1024350 | 0.815171 | 1.059999e-51 | -8.615850e-47 |
| Msa0334050 | Msa1061670 | 0.812311 | 4.519738e-51 | -8.615850e-47 |
| Msa0334050 | Msa1081610 | 0.804972 | 1.670927e-49 | -8.615850e-47 |
| Msa0334050 | Msa1087370 | 0.805054 | 1.606686e-49 | -8.615850e-47 |
| Msa0334050 | Msa1109880 | 0.809881 | 1.519984e-50 | -8.615850e-47 |
| Msa0334050 | Msa1109890 | 0.828152 | 1.053742e-54 | -8.615850e-47 |
| Msa0334050 | Msa1214960 | 0.803550 | 3.304507e-49 | -8.615850e-47 |
| Msa0334050 | Msa1216600 | 0.833628 | 4.780727e-56 | -8.615850e-47 |
| Msa0334050 | Msa1286420 | 0.802403 | 5.704926e-49 | -8.615850e-47 |
| Msa0334050 | Msa1296870 | 0.835253 | 1.868552e-56 | -8.615850e-47 |
| Msa0334050 | Msa1300610 | 0.802787 | 4.754041e-49 | -8.615850e-47 |
| Msa0334050 | Msa1323030 | 0.828452 | 8.918470e-55 | -8.615850e-47 |
| Msa0334050 | Msa1323160 | 0.819011 | 1.452694e-52 | -8.615850e-47 |
| Msa0334050 | Msa1357490 | 0.842945 | 1.896018e-58 | -8.615850e-47 |
| Msa0334050 | Msa1357860 | 0.819653 | 1.037204e-52 | -8.615850e-47 |
| Msa0334050 | Msa1373560 | 0.804410 | 2.189008e-49 | -8.615850e-47 |
| Msa0334050 | Msa1378400 | 0.811057 | 8.467383e-51 | -8.615850e-47 |
| Msa0334050 | Msa1380490 | 0.818925 | 1.519525e-52 | -8.615850e-47 |
| Msa0334050 | Msa1407670 | 0.819069 | 1.409256e-52 | -8.615850e-47 |
| Msa0334050 | Msa1411550 | 0.822154 | 2.756569e-53 | -8.615850e-47 |
| Msa0334050 | Msa1426420 | 0.845262 | 4.532515e-59 | -8.615850e-47 |
| Msa0334050 | Msa1449770 | 0.815974 | 7.022043e-52 | -8.615850e-47 |
| Msa0334050 | Msa1459610 | 0.838998 | 2.060412e-57 | -8.615850e-47 |
| Msa0334050 | Msa1459970 | 0.801566 | 8.474557e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334050 | MtrunA17_Chr2g0318341 | 91.167 | 317 | 28 | 0 | 285 | 601 | 25 | 341 | 0.0 | 601 |
| Msa0334050 | MtrunA17_Chr2g0318341 | 87.537 | 337 | 9 | 2 | 1 | 304 | 1 | 337 | 0.0 | 580 |
| Msa0334050 | MtrunA17_Chr2g0318311 | 86.446 | 332 | 42 | 1 | 270 | 601 | 13 | 341 | 0.0 | 588 |
| Msa0334050 | MtrunA17_Chr2g0318311 | 84.273 | 337 | 20 | 2 | 1 | 304 | 1 | 337 | 0.0 | 578 |
| Msa0334050 | MtrunA17_Chr8g0360691 | 66.869 | 329 | 109 | 0 | 273 | 601 | 13 | 341 | 7.26e-161 | 463 |
| Msa0334050 | MtrunA17_Chr8g0360691 | 62.310 | 329 | 90 | 3 | 10 | 304 | 9 | 337 | 2.76e-137 | 403 |
| Msa0334050 | MtrunA17_Chr4g0029291 | 48.214 | 280 | 138 | 4 | 306 | 582 | 120 | 395 | 3.07e-88 | 279 |
| Msa0334050 | MtrunA17_Chr4g0029291 | 43.403 | 288 | 123 | 7 | 38 | 289 | 112 | 395 | 4.51e-70 | 231 |
| Msa0334050 | MtrunA17_Chr4g0029271 | 46.786 | 280 | 143 | 4 | 306 | 582 | 110 | 386 | 2.26e-87 | 276 |
| Msa0334050 | MtrunA17_Chr4g0029271 | 42.807 | 285 | 124 | 5 | 41 | 289 | 105 | 386 | 1.31e-71 | 235 |
| Msa0334050 | MtrunA17_Chr2g0287361 | 43.525 | 278 | 139 | 5 | 334 | 601 | 62 | 331 | 7.45e-76 | 244 |
| Msa0334050 | MtrunA17_Chr2g0287361 | 36.610 | 295 | 130 | 8 | 33 | 293 | 38 | 309 | 8.66e-54 | 186 |
| Msa0334050 | MtrunA17_Chr2g0292811 | 43.165 | 278 | 140 | 5 | 334 | 601 | 61 | 330 | 2.49e-74 | 240 |
| Msa0334050 | MtrunA17_Chr2g0292811 | 37.591 | 274 | 123 | 6 | 33 | 274 | 37 | 294 | 8.88e-53 | 183 |
| Msa0334050 | MtrunA17_Chr2g0292801 | 42.857 | 280 | 147 | 5 | 325 | 601 | 324 | 593 | 3.98e-72 | 243 |
| Msa0334050 | MtrunA17_Chr2g0292801 | 34.951 | 309 | 149 | 8 | 31 | 304 | 298 | 589 | 1.67e-50 | 184 |
| Msa0334050 | MtrunA17_Chr2g0292821 | 42.500 | 280 | 148 | 5 | 325 | 601 | 324 | 593 | 3.87e-71 | 240 |
| Msa0334050 | MtrunA17_Chr2g0292821 | 34.951 | 309 | 149 | 8 | 31 | 304 | 298 | 589 | 6.28e-50 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0334050 | AT5G54370.1 | 64.548 | 299 | 101 | 2 | 306 | 601 | 41 | 337 | 2.72e-145 | 424 |
| Msa0334050 | AT5G54370.1 | 54.192 | 334 | 113 | 5 | 7 | 304 | 4 | 333 | 6.63e-123 | 367 |
| Msa0334050 | AT1G54890.1 | 61.589 | 302 | 111 | 3 | 305 | 601 | 46 | 347 | 2.43e-135 | 399 |
| Msa0334050 | AT1G54890.1 | 53.172 | 331 | 113 | 5 | 16 | 304 | 13 | 343 | 1.12e-117 | 353 |
| Msa0334050 | AT4G27400.1 | 55.836 | 317 | 135 | 3 | 289 | 601 | 26 | 341 | 6.50e-130 | 385 |
| Msa0334050 | AT4G27400.1 | 49.398 | 332 | 126 | 5 | 13 | 304 | 8 | 337 | 1.95e-106 | 324 |
| Msa0334050 | AT5G60520.1 | 51.698 | 265 | 124 | 3 | 306 | 567 | 64 | 327 | 1.30e-92 | 288 |
| Msa0334050 | AT5G60520.1 | 45.487 | 277 | 113 | 5 | 34 | 274 | 53 | 327 | 2.09e-75 | 244 |
| Msa0334050 | AT5G60530.1 | 49.451 | 273 | 133 | 3 | 306 | 574 | 164 | 435 | 9.99e-92 | 290 |
| Msa0334050 | AT5G60530.1 | 45.263 | 285 | 117 | 6 | 34 | 281 | 153 | 435 | 8.94e-79 | 256 |
| Msa0334050 | AT3G19430.1 | 41.254 | 303 | 157 | 6 | 303 | 601 | 274 | 559 | 2.03e-73 | 245 |
| Msa0334050 | AT3G19430.1 | 36.039 | 308 | 143 | 8 | 34 | 304 | 265 | 555 | 2.74e-53 | 191 |
| Msa0334050 | AT3G19430.2 | 41.254 | 303 | 157 | 6 | 303 | 601 | 297 | 582 | 2.34e-73 | 246 |
| Msa0334050 | AT3G19430.2 | 36.039 | 308 | 143 | 8 | 34 | 304 | 288 | 578 | 3.11e-53 | 191 |
Find 156 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCCACACCATCATCAATT+TGG | 0.212135 | 2_4:+52115148 | Msa0334050:CDS |
| ACAGATATTTCAGCAACTTC+TGG | 0.256973 | 2_4:-52111989 | None:intergenic |
| ACAGATATTTCAGCAACTTC+TGG | 0.256973 | 2_4:-52115315 | None:intergenic |
| ATTGCCACGCCTGGCTTTGC+CGG | 0.261338 | 2_4:-52112172 | None:intergenic |
| CATCAGGAATCTGATAATTA+TGG | 0.264771 | 2_4:-52112048 | None:intergenic |
| CATCAGGAATCTGATAATTA+TGG | 0.264771 | 2_4:-52115374 | None:intergenic |
| AGATAGCAAACTTTGTGTTT+TGG | 0.265953 | 2_4:-52114555 | None:intergenic |
| ATTGCCACGCCTGGCTTTGC+CGG | 0.284921 | 2_4:-52115498 | None:intergenic |
| GATCCACGACCATTACAATT+TGG | 0.298259 | 2_4:-52114919 | None:intergenic |
| TCCAAGAACTCCTTCAACTT+TGG | 0.319801 | 2_4:-52115448 | None:intergenic |
| GATGTGCAGTTCAAATTCTA+TGG | 0.321248 | 2_4:+52112091 | Msa0334050:CDS |
| GATGTGCAGTTCAAATTCTA+TGG | 0.321248 | 2_4:+52115417 | Msa0334050:CDS |
| CACGTGGAGAGGTGACCTTC+AGG | 0.323310 | 2_4:-52111899 | None:intergenic |
| CATGTAGAGAGGTGACCTTC+AGG | 0.334170 | 2_4:-52115225 | None:intergenic |
| TCCAAAGTTGAAGGAGTTCT+TGG | 0.337116 | 2_4:+52112121 | Msa0334050:intron |
| TCCAAAGTTGAAGGAGTTCT+TGG | 0.337116 | 2_4:+52115447 | Msa0334050:CDS |
| TAAAACGAGCATTGATTTGA+AGG | 0.368629 | 2_4:-52115038 | None:intergenic |
| GATCTTGAAGGGCACTGAAT+AGG | 0.375732 | 2_4:-52114522 | None:intergenic |
| TAAAACGAGCATTGATTTGA+AGG | 0.375773 | 2_4:-52111712 | None:intergenic |
| ATCTTGAAGGGCACTGAATA+GGG | 0.384154 | 2_4:-52114521 | None:intergenic |
| CAGATATTTCAGCAACTTCT+GGG | 0.400574 | 2_4:-52111988 | None:intergenic |
| CAGATATTTCAGCAACTTCT+GGG | 0.400574 | 2_4:-52115314 | None:intergenic |
| AGCCACACCATCATCAATTT+GGG | 0.401698 | 2_4:+52115149 | Msa0334050:CDS |
| GAAGGCTTGGAGATTGAATA+TGG | 0.405534 | 2_4:+52115618 | Msa0334050:CDS |
| GATCTGCATGCTTGGACCCT+CGG | 0.411633 | 2_4:+52114938 | Msa0334050:CDS |
| GGCGTGGCAATGCCGGTCAT+TGG | 0.420807 | 2_4:+52115510 | Msa0334050:CDS |
| TATACTTGGATTCAAGCATT+GGG | 0.425530 | 2_4:+52111767 | Msa0334050:CDS |
| TATACTTGGATTCAAGCATT+GGG | 0.425530 | 2_4:+52115093 | Msa0334050:CDS |
| TGGCCGCGGATCTGCGTGCT+TGG | 0.430493 | 2_4:+52111604 | Msa0334050:CDS |
| AGATTCAGTGCAGGAAGGCT+TGG | 0.436915 | 2_4:+52115605 | Msa0334050:CDS |
| CCTCGTTTCGTTGGTGCGGA+TGG | 0.440785 | 2_4:+52111629 | Msa0334050:CDS |
| TGAGAAAACAACGGCTCTTA+CGG | 0.441610 | 2_4:-52111056 | None:intergenic |
| GGGTTAGCTGGTGATCTTGA+AGG | 0.441826 | 2_4:-52111105 | None:intergenic |
| AACTATACCATTACCACTGC+TGG | 0.442336 | 2_4:-52115664 | None:intergenic |
| GAAGGCATGGATATTGAGTA+TGG | 0.445718 | 2_4:+52112292 | Msa0334050:CDS |
| ACGAGCATTGATTTGAAGGT+TGG | 0.446132 | 2_4:-52111708 | None:intergenic |
| CCTCGGTTCGTTGGTGCGGA+TGG | 0.452228 | 2_4:+52114955 | Msa0334050:CDS |
| ACTACTGGCATTGCCACGCC+TGG | 0.455683 | 2_4:-52112181 | None:intergenic |
| AAAGCCAGGCGTGGCAATGC+CGG | 0.457703 | 2_4:+52115503 | Msa0334050:CDS |
| GGAGACCAAGGGATTATACT+TGG | 0.459154 | 2_4:+52111753 | Msa0334050:CDS |
| TTGGTCTCCCTTGCGGCCTA+AGG | 0.460474 | 2_4:-52115065 | None:intergenic |
| GGAGACCAAGGGATTATACT+TGG | 0.461637 | 2_4:+52115079 | Msa0334050:CDS |
| ATGACCGGCATTGCCACGCC+TGG | 0.467891 | 2_4:-52115507 | None:intergenic |
| TTGGTCTCCCTAGCGGCCTA+AGG | 0.471410 | 2_4:-52111739 | None:intergenic |
| GGGTTAGCAGGTGATCTTGA+AGG | 0.475004 | 2_4:-52114534 | None:intergenic |
| ATGGATTCTACTGTCCTCCT+TGG | 0.475359 | 2_4:-52112029 | None:intergenic |
| ATGGATTCTACTGTCCTCCT+TGG | 0.475359 | 2_4:-52115355 | None:intergenic |
| GTGGCAATGCCGGTCATTGG+AGG | 0.478744 | 2_4:+52115513 | Msa0334050:CDS |
| TTATACTTGGATTCAAGCAT+TGG | 0.481860 | 2_4:+52111766 | Msa0334050:CDS |
| TTATACTTGGATTCAAGCAT+TGG | 0.481860 | 2_4:+52115092 | Msa0334050:CDS |
| TTGTCTTCCCCTCCAACTAC+TGG | 0.482550 | 2_4:-52112196 | None:intergenic |
| TGAGCAAAACAATCATCATC+AGG | 0.483129 | 2_4:-52112064 | None:intergenic |
| TGAGCAAAACAATCATCATC+AGG | 0.483129 | 2_4:-52115390 | None:intergenic |
| GGCGTGGCAATGCCAGTAGT+TGG | 0.486470 | 2_4:+52112184 | Msa0334050:CDS |
| TTTCAAAATCCGGCAAAGCC+AGG | 0.488564 | 2_4:+52112163 | Msa0334050:CDS |
| TTTCAAAATCCGGCAAAGCC+AGG | 0.488564 | 2_4:+52115489 | Msa0334050:CDS |
| GGTCGTAAAGCAAATTGTAA+TGG | 0.494042 | 2_4:+52111584 | Msa0334050:intron |
| CTACTGTCCTCCTTGGTGAC+AGG | 0.494181 | 2_4:-52112022 | None:intergenic |
| CTACTGTCCTCCTTGGTGAC+AGG | 0.494181 | 2_4:-52115348 | None:intergenic |
| CCTCGGATTGCCACGTGGAG+AGG | 0.499460 | 2_4:-52111910 | None:intergenic |
| CTGAAGGTCACCTCTCTACA+TGG | 0.503524 | 2_4:+52115226 | Msa0334050:CDS |
| GGAGATTGAATATGGTATGA+TGG | 0.508182 | 2_4:+52115626 | Msa0334050:CDS |
| TGCTTGGACCCTCGGTTCGT+TGG | 0.509275 | 2_4:+52114946 | Msa0334050:CDS |
| TTTATCGGCCTTAGGCCGCT+AGG | 0.513330 | 2_4:+52111731 | Msa0334050:CDS |
| AATGCTCATTCCTCCTTCCA+TGG | 0.514259 | 2_4:-52111667 | None:intergenic |
| TTCTGTTAAAGATTCAGTGC+AGG | 0.514763 | 2_4:+52115596 | Msa0334050:CDS |
| AAACCAAATTGTAATGGTCG+TGG | 0.516808 | 2_4:+52114916 | Msa0334050:CDS |
| GGATATTGAGTATGGTATGA+TGG | 0.518205 | 2_4:+52112300 | Msa0334050:CDS |
| TGGCAATGCCGGTCATTGGA+GGG | 0.520893 | 2_4:+52115514 | Msa0334050:CDS |
| AGATTCAGTGCAGGAAGGCA+TGG | 0.525207 | 2_4:+52112279 | Msa0334050:CDS |
| TGCTTGGACCCTCGTTTCGT+TGG | 0.528337 | 2_4:+52111620 | Msa0334050:CDS |
| TGGTCGTGGATCTGCATGCT+TGG | 0.528868 | 2_4:+52114930 | Msa0334050:CDS |
| GGTTAGCAGGTGATCTTGAA+GGG | 0.529857 | 2_4:-52114533 | None:intergenic |
| ATGTAGAGAGGTGACCTTCA+GGG | 0.531349 | 2_4:-52115224 | None:intergenic |
| ACGTGGAGAGGTGACCTTCA+GGG | 0.531866 | 2_4:-52111898 | None:intergenic |
| GGACCCTCGGTTCGTTGGTG+CGG | 0.532291 | 2_4:+52114951 | Msa0334050:CDS |
| TTGTCTTCCCCTCCAATGAC+CGG | 0.533192 | 2_4:-52115522 | None:intergenic |
| ATCTGAAGATGCAAGGGATG+TGG | 0.533450 | 2_4:-52112227 | None:intergenic |
| GGTGGTGCCAGCAGTGGTAA+TGG | 0.535725 | 2_4:+52115657 | Msa0334050:CDS |
| CAAGACAATCTGAAGAAACA+AGG | 0.537212 | 2_4:-52115560 | None:intergenic |
| GGTGGTGCTAGCAGTGGTAA+TGG | 0.538430 | 2_4:+52112331 | Msa0334050:CDS |
| TTTATCGGCCTTAGGCCGCA+AGG | 0.538998 | 2_4:+52115057 | Msa0334050:CDS |
| GGTTTATCGTCCAAAGTTGA+AGG | 0.540641 | 2_4:+52115438 | Msa0334050:CDS |
| TGAATCCAAGTATAATCCCT+TGG | 0.542313 | 2_4:-52111758 | None:intergenic |
| TGAATCCAAGTATAATCCCT+TGG | 0.542313 | 2_4:-52115084 | None:intergenic |
| CGTCATAAGAGAGCTTCAAA+TGG | 0.545184 | 2_4:-52115185 | None:intergenic |
| AGTGCTCATTCCTCCTTCCA+TGG | 0.545876 | 2_4:-52114993 | None:intergenic |
| ATCTGAAGAAACAAGGGATG+TGG | 0.547311 | 2_4:-52115553 | None:intergenic |
| TTCTGCTAAAGATTCAGTGC+AGG | 0.549391 | 2_4:+52112270 | Msa0334050:CDS |
| GGCAATGCCGGTCATTGGAG+GGG | 0.549475 | 2_4:+52115515 | Msa0334050:CDS |
| GTGGCAATGCCAGTAGTTGG+AGG | 0.551168 | 2_4:+52112187 | Msa0334050:CDS |
| CCTCGGATTGCCATGTAGAG+AGG | 0.553637 | 2_4:-52115236 | None:intergenic |
| GGTCGTAAACCAAATTGTAA+TGG | 0.554034 | 2_4:+52114910 | Msa0334050:intron |
| TCGTCATCCCAAATTGATGA+TGG | 0.560527 | 2_4:-52115156 | None:intergenic |
| CAAGACAATCTGAAGATGCA+AGG | 0.565565 | 2_4:-52112234 | None:intergenic |
| GGTATGATGGATTGCACTGG+TGG | 0.568752 | 2_4:+52112313 | Msa0334050:CDS |
| GATCTTGAAGGACATTGAGC+AGG | 0.570539 | 2_4:-52111093 | None:intergenic |
| TGGCAATGCCAGTAGTTGGA+GGG | 0.574377 | 2_4:+52112188 | Msa0334050:CDS |
| AAAAGTTGTGTGAATCAAAG+AGG | 0.574407 | 2_4:-52115119 | None:intergenic |
| CATTTGAAGCTCTCTTATGA+CGG | 0.574479 | 2_4:+52111860 | Msa0334050:intron |
| CATTTGAAGCTCTCTTATGA+CGG | 0.574479 | 2_4:+52115186 | Msa0334050:CDS |
| TTAGGCCGCAAGGGAGACCA+AGG | 0.575605 | 2_4:+52115067 | Msa0334050:CDS |
| GAAGCTCTCTTATGACGGAA+AGG | 0.577165 | 2_4:+52111865 | Msa0334050:intron |
| GAAGCTCTCTTATGACGGAA+AGG | 0.577165 | 2_4:+52115191 | Msa0334050:CDS |
| TTATCGGCCTTAGGCCGCTA+GGG | 0.584302 | 2_4:+52111732 | Msa0334050:CDS |
| TTAGGCCGCTAGGGAGACCA+AGG | 0.588612 | 2_4:+52111741 | Msa0334050:CDS |
| GAGGAATGAGCATTTCAGCT+TGG | 0.589342 | 2_4:+52111676 | Msa0334050:CDS |
| ATCGAATGAGAACGGTGTCA+TGG | 0.591031 | 2_4:+52111958 | Msa0334050:CDS |
| ATCGAATGAGAACGGTGTCA+TGG | 0.591031 | 2_4:+52115284 | Msa0334050:CDS |
| TGCACTGGTGGTGCCAGCAG+TGG | 0.591546 | 2_4:+52115651 | Msa0334050:CDS |
| GGCAATGCCAGTAGTTGGAG+GGG | 0.593366 | 2_4:+52112189 | Msa0334050:CDS |
| CAAGATCACCAGCTAACCCA+AGG | 0.593988 | 2_4:+52111109 | Msa0334050:CDS |
| TAATCCCTTGGTCTCCCTTG+CGG | 0.596610 | 2_4:-52115072 | None:intergenic |
| AAAACAACGGCTCTTACGGT+TGG | 0.597533 | 2_4:-52111052 | None:intergenic |
| AAGACAATCTGAAGATGCAA+GGG | 0.603290 | 2_4:-52112233 | None:intergenic |
| AAAGCAAATTGTAATGGCCG+CGG | 0.604200 | 2_4:+52111590 | Msa0334050:CDS |
| TTATCGGCCTTAGGCCGCAA+GGG | 0.605783 | 2_4:+52115058 | Msa0334050:CDS |
| CCTCTCCACGTGGCAATCCG+AGG | 0.606272 | 2_4:+52111910 | Msa0334050:CDS |
| GGTCCAAGCACGCAGATCCG+CGG | 0.606584 | 2_4:-52111607 | None:intergenic |
| GTTAAAGATTCAGTGCAGGA+AGG | 0.612449 | 2_4:+52115600 | Msa0334050:CDS |
| GGACCCTCGTTTCGTTGGTG+CGG | 0.615729 | 2_4:+52111625 | Msa0334050:CDS |
| GGTATGATGGATTGCACTGG+TGG | 0.616779 | 2_4:+52115639 | Msa0334050:CDS |
| CCATCCGCACCAACGAAACG+AGG | 0.619171 | 2_4:-52111629 | None:intergenic |
| CAATGTGGTGCCTGTCACCA+AGG | 0.622527 | 2_4:+52112012 | Msa0334050:CDS |
| CAATGTGGTGCCTGTCACCA+AGG | 0.622527 | 2_4:+52115338 | Msa0334050:CDS |
| ATACTTGGATTCAAGCATTG+GGG | 0.623520 | 2_4:+52111768 | Msa0334050:CDS |
| ATACTTGGATTCAAGCATTG+GGG | 0.623520 | 2_4:+52115094 | Msa0334050:CDS |
| TGCACTGGTGGTGCTAGCAG+TGG | 0.626595 | 2_4:+52112325 | Msa0334050:CDS |
| CATCCGCACCAACGAACCGA+GGG | 0.629982 | 2_4:-52114954 | None:intergenic |
| GAAGGACATTGAGCAGGACA+AGG | 0.630142 | 2_4:-52111087 | None:intergenic |
| AAGGATCTCGTAATCCCTGA+AGG | 0.634498 | 2_4:+52111884 | Msa0334050:CDS |
| AAGGATCTCGTAATCCCTGA+AGG | 0.634498 | 2_4:+52115210 | Msa0334050:CDS |
| CCATCCGCACCAACGAACCG+AGG | 0.635702 | 2_4:-52114955 | None:intergenic |
| ATCCCAAATTGATGATGGTG+TGG | 0.638854 | 2_4:-52115151 | None:intergenic |
| AAGACAATCTGAAGAAACAA+GGG | 0.640149 | 2_4:-52115559 | None:intergenic |
| CCTCTCTACATGGCAATCCG+AGG | 0.646287 | 2_4:+52115236 | Msa0334050:CDS |
| GCTAAAGATTCAGTGCAGGA+AGG | 0.646657 | 2_4:+52112274 | Msa0334050:CDS |
| AAATCCGGCAAAGCCAGGCG+TGG | 0.649193 | 2_4:+52112168 | Msa0334050:CDS |
| AAATCCGGCAAAGCCAGGCG+TGG | 0.649193 | 2_4:+52115494 | Msa0334050:CDS |
| GAGAGAACATCGAATGAGAA+CGG | 0.650582 | 2_4:+52111950 | Msa0334050:CDS |
| GAGAGAACATCGAATGAGAA+CGG | 0.650582 | 2_4:+52115276 | Msa0334050:CDS |
| TATGGTATGATGGATTGCAC+TGG | 0.652916 | 2_4:+52112310 | Msa0334050:CDS |
| TAATCCCTTGGTCTCCCTAG+CGG | 0.654842 | 2_4:-52111746 | None:intergenic |
| TACTTGGATTCAAGCATTGG+GGG | 0.654990 | 2_4:+52111769 | Msa0334050:CDS |
| TACTTGGATTCAAGCATTGG+GGG | 0.654990 | 2_4:+52115095 | Msa0334050:CDS |
| TATGGTATGATGGATTGCAC+TGG | 0.671149 | 2_4:+52115636 | Msa0334050:CDS |
| GTAGTTTCTTGAGAAAACAA+CGG | 0.671848 | 2_4:-52111065 | None:intergenic |
| CTGAAGGTCACCTCTCCACG+TGG | 0.671875 | 2_4:+52111900 | Msa0334050:CDS |
| AAGATCACCAGCTAACCCAA+GGG | 0.673008 | 2_4:+52111110 | Msa0334050:CDS |
| CATCCGCACCAACGAAACGA+GGG | 0.683977 | 2_4:-52111628 | None:intergenic |
| TAGGCCGCTAGGGAGACCAA+GGG | 0.701533 | 2_4:+52111742 | Msa0334050:CDS |
| TAGGCCGCAAGGGAGACCAA+GGG | 0.706685 | 2_4:+52115068 | Msa0334050:CDS |
| TGCTGAAATATCTGTCAATG+TGG | 0.712131 | 2_4:+52111997 | Msa0334050:CDS |
| TGCTGAAATATCTGTCAATG+TGG | 0.712131 | 2_4:+52115323 | Msa0334050:CDS |
| TGTGGTGCCTGTCACCAAGG+AGG | 0.732407 | 2_4:+52112015 | Msa0334050:CDS |
| TGTGGTGCCTGTCACCAAGG+AGG | 0.732407 | 2_4:+52115341 | Msa0334050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTGTGATAAATTTAATA+AGG | + | chr2_4:52111247-52111266 | Msa0334050:intron | 15.0% |
| !!! | TTTTATACATAGTACATAAT+AGG | + | chr2_4:52113231-52113250 | Msa0334050:intron | 15.0% |
| !!! | TTTTTCGTATTTTATGATAA+TGG | + | chr2_4:52114670-52114689 | Msa0334050:intron | 15.0% |
| !! | TGTGATAAATTTAATAAGGT+TGG | + | chr2_4:52111251-52111270 | Msa0334050:intron | 20.0% |
| !! | AACAAGTGATCATTATATAT+TGG | + | chr2_4:52111507-52111526 | Msa0334050:intron | 20.0% |
| !! | AACAAGTGTTCATTATATAT+TGG | + | chr2_4:52111552-52111571 | Msa0334050:intron | 20.0% |
| !!! | ATGGTTACAAAACAATATTT+TGG | - | chr2_4:52112459-52112478 | None:intergenic | 20.0% |
| !! | AAATTGGATGTTTATTCATT+CGG | - | chr2_4:52112898-52112917 | None:intergenic | 20.0% |
| !! | TGCATGTAAAAATAAGATAA+AGG | + | chr2_4:52113164-52113183 | Msa0334050:intron | 20.0% |
| !! | GCATGTAAAAATAAGATAAA+GGG | + | chr2_4:52113165-52113184 | Msa0334050:intron | 20.0% |
| !! | AAGCAAAAAGATAGTATATA+AGG | + | chr2_4:52114305-52114324 | Msa0334050:intron | 20.0% |
| !! | GATTATTTATGTTCAATACT+TGG | + | chr2_4:52114620-52114639 | Msa0334050:intron | 20.0% |
| !! | AACAAGTGTTAATTATATAG+TGG | + | chr2_4:52114876-52114895 | Msa0334050:intron | 20.0% |
| !! | GAAATAATCCTATTTGAGAT+CGG | - | chr2_4:52111407-52111426 | None:intergenic | 25.0% |
| ! | ATTATATATTGGATGCGAAT+AGG | + | chr2_4:52111563-52111582 | Msa0334050:intron | 25.0% |
| !! | TAGTTTGCAGAAGATAAATT+TGG | + | chr2_4:52112356-52112375 | Msa0334050:intron | 25.0% |
| !! | ACGTAATTATAAGAAAGCAT+TGG | - | chr2_4:52112388-52112407 | None:intergenic | 25.0% |
| ! | AACTCAGAAAAAAATGTTTG+TGG | + | chr2_4:52112419-52112438 | Msa0334050:intron | 25.0% |
| ! | ACTCAGAAAAAAATGTTTGT+GGG | + | chr2_4:52112420-52112439 | Msa0334050:intron | 25.0% |
| ! | TTCTTACACAAAAGGAAATA+TGG | - | chr2_4:52112478-52112497 | None:intergenic | 25.0% |
| ! | TAAGACAATTCTTACACAAA+AGG | - | chr2_4:52112486-52112505 | None:intergenic | 25.0% |
| ! | AATTAACACGCTTATTCAAA+AGG | - | chr2_4:52112542-52112561 | None:intergenic | 25.0% |
| ! | TTTGAATAAGCGTGTTAATT+TGG | + | chr2_4:52112542-52112561 | Msa0334050:intron | 25.0% |
| ! | CAATCACAATAGAAAAACAA+TGG | - | chr2_4:52112573-52112592 | None:intergenic | 25.0% |
| ! | TAACTCAAAGAAACATGTTA+TGG | + | chr2_4:52112600-52112619 | Msa0334050:intron | 25.0% |
| ! | AACTCAAAGAAACATGTTAT+GGG | + | chr2_4:52112601-52112620 | Msa0334050:intron | 25.0% |
| ! | TTCATTTGCATATAATCACT+AGG | - | chr2_4:52112669-52112688 | None:intergenic | 25.0% |
| ! | CAACAATAGATTTCAATACA+AGG | - | chr2_4:52112727-52112746 | None:intergenic | 25.0% |
| !!! | TGTTGCATTCTAAAGTATTA+TGG | + | chr2_4:52112928-52112947 | Msa0334050:intron | 25.0% |
| ! | ATTAGAAGGGAAAAATACTA+AGG | + | chr2_4:52113776-52113795 | Msa0334050:intron | 25.0% |
| !! | AAAATTCAAAACGCAGATTT+TGG | + | chr2_4:52113871-52113890 | Msa0334050:intron | 25.0% |
| ! | GGTATATGATAAGTTATGTA+GGG | - | chr2_4:52114003-52114022 | None:intergenic | 25.0% |
| ! | GTGCAGTTATATAAAAGATT+GGG | - | chr2_4:52114024-52114043 | None:intergenic | 25.0% |
| ! | TGTGCAGTTATATAAAAGAT+TGG | - | chr2_4:52114025-52114044 | None:intergenic | 25.0% |
| ! | AAAAGATAGTATATAAGGTG+AGG | + | chr2_4:52114310-52114329 | Msa0334050:intron | 25.0% |
| !! | TGTTCTTTTATGAAATTCAC+AGG | - | chr2_4:52114806-52114825 | None:intergenic | 25.0% |
| GTAGTTTCTTGAGAAAACAA+CGG | - | chr2_4:52111068-52111087 | None:intergenic | 30.0% | |
| ! | TTGTTTTCTATTTCCATGGA+AGG | + | chr2_4:52111654-52111673 | Msa0334050:CDS | 30.0% |
| !! | TAAAACGAGCATTGATTTGA+AGG | - | chr2_4:52111715-52111734 | None:intergenic | 30.0% |
| ! | CAAATCAATGCTCGTTTTAT+CGG | + | chr2_4:52111716-52111735 | Msa0334050:CDS | 30.0% |
| TTATACTTGGATTCAAGCAT+TGG | + | chr2_4:52111766-52111785 | Msa0334050:CDS | 30.0% | |
| TATACTTGGATTCAAGCATT+GGG | + | chr2_4:52111767-52111786 | Msa0334050:CDS | 30.0% | |
| AAAAGTTGTGTGAATCAAAG+AGG | - | chr2_4:52111796-52111815 | None:intergenic | 30.0% | |
| CATCAGGAATCTGATAATTA+TGG | - | chr2_4:52112051-52112070 | None:intergenic | 30.0% | |
| !! | TGATGATTGTTTTGCTCATT+TGG | + | chr2_4:52112069-52112088 | Msa0334050:CDS | 30.0% |
| AATTAACAACTCAAAGCTGA+GGG | - | chr2_4:52113090-52113109 | None:intergenic | 30.0% | |
| TAATTAACAACTCAAAGCTG+AGG | - | chr2_4:52113091-52113110 | None:intergenic | 30.0% | |
| ACAATCAGATATCCATAGTT+CGG | + | chr2_4:52113586-52113605 | Msa0334050:intron | 30.0% | |
| TCAATTAACTCGAAATTGGA+AGG | - | chr2_4:52113677-52113696 | None:intergenic | 30.0% | |
| ACAAATCACTCAAGATTAGA+AGG | + | chr2_4:52113762-52113781 | Msa0334050:intron | 30.0% | |
| CAAATCACTCAAGATTAGAA+GGG | + | chr2_4:52113763-52113782 | Msa0334050:intron | 30.0% | |
| !!! | TCACTAGTAAGTTTTAGAAG+AGG | - | chr2_4:52113825-52113844 | None:intergenic | 30.0% |
| !! | GTTTTGAATTTTGTGTCACT+TGG | - | chr2_4:52113863-52113882 | None:intergenic | 30.0% |
| GGGTATATGATAAGTTATGT+AGG | - | chr2_4:52114004-52114023 | None:intergenic | 30.0% | |
| ! | GATAATGAAAGTTGACTTAG+TGG | - | chr2_4:52114165-52114184 | None:intergenic | 30.0% |
| TGAATTGCTGGAATTATTTG+TGG | - | chr2_4:52114227-52114246 | None:intergenic | 30.0% | |
| CTTATAGAAAACTCAACAAG+TGG | - | chr2_4:52114288-52114307 | None:intergenic | 30.0% | |
| CAAACAAGAGAAAATCAACA+TGG | + | chr2_4:52114359-52114378 | Msa0334050:intron | 30.0% | |
| TCAGTTTCTTGAGAAAACAA+CGG | - | chr2_4:52114497-52114516 | None:intergenic | 30.0% | |
| ! | GATAGCAAACTTTGTGTTTT+GGG | - | chr2_4:52114557-52114576 | None:intergenic | 30.0% |
| ! | AGATAGCAAACTTTGTGTTT+TGG | - | chr2_4:52114558-52114577 | None:intergenic | 30.0% |
| !! | TAAAACGAGCATTGATTTGA+AGG | - | chr2_4:52111715-52111734 | None:intergenic | 30.0% |
| ! | CAAATCAATGCTCGTTTTAT+CGG | + | chr2_4:52111716-52111735 | Msa0334050:CDS | 30.0% |
| TTATACTTGGATTCAAGCAT+TGG | + | chr2_4:52111766-52111785 | Msa0334050:CDS | 30.0% | |
| TATACTTGGATTCAAGCATT+GGG | + | chr2_4:52111767-52111786 | Msa0334050:CDS | 30.0% | |
| AAAAGTTGTGTGAATCAAAG+AGG | - | chr2_4:52111796-52111815 | None:intergenic | 30.0% | |
| CATCAGGAATCTGATAATTA+TGG | - | chr2_4:52112051-52112070 | None:intergenic | 30.0% | |
| !! | TGATGATTGTTTTGCTCATT+TGG | + | chr2_4:52112069-52112088 | Msa0334050:CDS | 30.0% |
| AAGACAATCTGAAGAAACAA+GGG | - | chr2_4:52115562-52115581 | None:intergenic | 30.0% | |
| !! | GATAGCAAACTTTTTCCCTT+GGG | - | chr2_4:52111128-52111147 | None:intergenic | 35.0% |
| !! | AGATAGCAAACTTTTTCCCT+TGG | - | chr2_4:52111129-52111148 | None:intergenic | 35.0% |
| AAAACTAACATGCTCTCACT+AGG | - | chr2_4:52111277-52111296 | None:intergenic | 35.0% | |
| !!! | GCATGTTAGTTTTGCAAATG+TGG | + | chr2_4:52111284-52111303 | Msa0334050:intron | 35.0% |
| ATGTTCTACCGATCTCAAAT+AGG | + | chr2_4:52111396-52111415 | Msa0334050:intron | 35.0% | |
| GGTCGTAAAGCAAATTGTAA+TGG | + | chr2_4:52111584-52111603 | Msa0334050:intron | 35.0% | |
| ! | GGCATTGTTTTCTATTTCCA+TGG | + | chr2_4:52111650-52111669 | Msa0334050:CDS | 35.0% |
| ! | TTTTCTATTTCCATGGAAGG+AGG | + | chr2_4:52111657-52111676 | Msa0334050:CDS | 35.0% |
| TGAATCCAAGTATAATCCCT+TGG | - | chr2_4:52111761-52111780 | None:intergenic | 35.0% | |
| ! | ATACTTGGATTCAAGCATTG+GGG | + | chr2_4:52111768-52111787 | Msa0334050:CDS | 35.0% |
| TCATCATCCCAAATTGATGA+TGG | - | chr2_4:52111833-52111852 | None:intergenic | 35.0% | |
| ! | CATTTGAAGCTCTCTTATGA+CGG | + | chr2_4:52111860-52111879 | Msa0334050:intron | 35.0% |
| !!! | GACTCTAAGTTGATTTTCCT+CGG | - | chr2_4:52111930-52111949 | None:intergenic | 35.0% |
| CAGATATTTCAGCAACTTCT+GGG | - | chr2_4:52111991-52112010 | None:intergenic | 35.0% | |
| ACAGATATTTCAGCAACTTC+TGG | - | chr2_4:52111992-52112011 | None:intergenic | 35.0% | |
| TGCTGAAATATCTGTCAATG+TGG | + | chr2_4:52111997-52112016 | Msa0334050:CDS | 35.0% | |
| TGAGCAAAACAATCATCATC+AGG | - | chr2_4:52112067-52112086 | None:intergenic | 35.0% | |
| GATGTGCAGTTCAAATTCTA+TGG | + | chr2_4:52112091-52112110 | Msa0334050:CDS | 35.0% | |
| ! | TCAGCCAGATTTTCAAAATC+CGG | + | chr2_4:52112153-52112172 | Msa0334050:CDS | 35.0% |
| !! | TTTGCCGGATTTTGAAAATC+TGG | - | chr2_4:52112160-52112179 | None:intergenic | 35.0% |
| AAGACAATCTGAAGATGCAA+GGG | - | chr2_4:52112236-52112255 | None:intergenic | 35.0% | |
| GGATATTGAGTATGGTATGA+TGG | + | chr2_4:52112300-52112319 | Msa0334050:CDS | 35.0% | |
| CGCTTATTCAAAAGGAAACA+TGG | - | chr2_4:52112534-52112553 | None:intergenic | 35.0% | |
| AACATGTTATGGGATGTACT+CGG | + | chr2_4:52112611-52112630 | Msa0334050:intron | 35.0% | |
| TATTGATACAAGCACAAGCA+TGG | + | chr2_4:52112751-52112770 | Msa0334050:intron | 35.0% | |
| ATTGATACAAGCACAAGCAT+GGG | + | chr2_4:52112752-52112771 | Msa0334050:intron | 35.0% | |
| !! | CTTTAGAATGCAACAACTCA+CGG | - | chr2_4:52112923-52112942 | None:intergenic | 35.0% |
| TAGGCTAAAATCAGCAACTT+TGG | + | chr2_4:52113023-52113042 | Msa0334050:intron | 35.0% | |
| TTTATTCTTCAGCGATACCT+CGG | - | chr2_4:52113061-52113080 | None:intergenic | 35.0% | |
| AGGGATAAAATAGCGAGAAT+AGG | + | chr2_4:52113184-52113203 | Msa0334050:intron | 35.0% | |
| TTATGGAAAGTTGCACACTA+TGG | - | chr2_4:52113418-52113437 | None:intergenic | 35.0% | |
| TATAACGTCACTAACCACAA+GGG | - | chr2_4:52113463-52113482 | None:intergenic | 35.0% | |
| TTATAACGTCACTAACCACA+AGG | - | chr2_4:52113464-52113483 | None:intergenic | 35.0% | |
| TGGTTAGTGACGTTATAAAC+AGG | + | chr2_4:52113466-52113485 | Msa0334050:intron | 35.0% | |
| AAGTCAAAGCTTAGTAGAAC+TGG | - | chr2_4:52113517-52113536 | None:intergenic | 35.0% | |
| TTAACTCGAAATTGGAAGGT+AGG | - | chr2_4:52113673-52113692 | None:intergenic | 35.0% | |
| CCACTCAATTAACTCGAAAT+TGG | - | chr2_4:52113681-52113700 | None:intergenic | 35.0% | |
| !! | CCAATTTCGAGTTAATTGAG+TGG | + | chr2_4:52113678-52113697 | Msa0334050:intron | 35.0% |
| !!! | GTAAGTTTTAGAAGAGGCTA+AGG | - | chr2_4:52113819-52113838 | None:intergenic | 35.0% |
| TGACTTTCAACCATGAAATG+TGG | - | chr2_4:52114106-52114125 | None:intergenic | 35.0% | |
| ! | GTTGACTTAGTGGTTTAGAA+TGG | - | chr2_4:52114155-52114174 | None:intergenic | 35.0% |
| !! | TTATGATAATGGTCGCAGTA+AGG | + | chr2_4:52114681-52114700 | Msa0334050:intron | 35.0% |
| !! | TATGATAATGGTCGCAGTAA+GGG | + | chr2_4:52114682-52114701 | Msa0334050:intron | 35.0% |
| CTTTGTGATCCTTGATATTG+CGG | + | chr2_4:52114714-52114733 | Msa0334050:intron | 35.0% | |
| !! | TATATAGTGGATATGAGAGC+AGG | + | chr2_4:52114889-52114908 | Msa0334050:intron | 35.0% |
| GGTCGTAAACCAAATTGTAA+TGG | + | chr2_4:52114910-52114929 | Msa0334050:intron | 35.0% | |
| AAACCAAATTGTAATGGTCG+TGG | + | chr2_4:52114916-52114935 | Msa0334050:CDS | 35.0% | |
| ! | TTGTTTTCTACTTCCATGGA+AGG | + | chr2_4:52114980-52114999 | Msa0334050:CDS | 35.0% |
| TGAATCCAAGTATAATCCCT+TGG | - | chr2_4:52111761-52111780 | None:intergenic | 35.0% | |
| ! | ATACTTGGATTCAAGCATTG+GGG | + | chr2_4:52111768-52111787 | Msa0334050:CDS | 35.0% |
| ! | CATTTGAAGCTCTCTTATGA+CGG | + | chr2_4:52111860-52111879 | Msa0334050:intron | 35.0% |
| !!! | GACTCTAAGTTGATTTTCCT+CGG | - | chr2_4:52111930-52111949 | None:intergenic | 35.0% |
| CAGATATTTCAGCAACTTCT+GGG | - | chr2_4:52111991-52112010 | None:intergenic | 35.0% | |
| ACAGATATTTCAGCAACTTC+TGG | - | chr2_4:52111992-52112011 | None:intergenic | 35.0% | |
| TGCTGAAATATCTGTCAATG+TGG | + | chr2_4:52111997-52112016 | Msa0334050:CDS | 35.0% | |
| TGAGCAAAACAATCATCATC+AGG | - | chr2_4:52112067-52112086 | None:intergenic | 35.0% | |
| GATGTGCAGTTCAAATTCTA+TGG | + | chr2_4:52112091-52112110 | Msa0334050:CDS | 35.0% | |
| ! | TCAGCCAGATTTTCAAAATC+CGG | + | chr2_4:52112153-52112172 | Msa0334050:CDS | 35.0% |
| !! | TTTGCCGGATTTTGAAAATC+TGG | - | chr2_4:52112160-52112179 | None:intergenic | 35.0% |
| CAAGACAATCTGAAGAAACA+AGG | - | chr2_4:52115563-52115582 | None:intergenic | 35.0% | |
| TTCTGTTAAAGATTCAGTGC+AGG | + | chr2_4:52115596-52115615 | Msa0334050:CDS | 35.0% | |
| GGAGATTGAATATGGTATGA+TGG | + | chr2_4:52115626-52115645 | Msa0334050:CDS | 35.0% | |
| TGAGAAAACAACGGCTCTTA+CGG | - | chr2_4:52111059-52111078 | None:intergenic | 40.0% | |
| ! | TTGCACTGAGTTTTGCACAT+AGG | - | chr2_4:52111165-52111184 | None:intergenic | 40.0% |
| AAATCAAACGAGAGACCTCT+CGG | - | chr2_4:52111335-52111354 | None:intergenic | 40.0% | |
| AAAGCAAATTGTAATGGCCG+CGG | + | chr2_4:52111590-52111609 | Msa0334050:CDS | 40.0% | |
| !! | ACGAGCATTGATTTGAAGGT+TGG | - | chr2_4:52111711-52111730 | None:intergenic | 40.0% |
| !! | TACTTGGATTCAAGCATTGG+GGG | + | chr2_4:52111769-52111788 | Msa0334050:CDS | 40.0% |
| AAGCCACACCATCATCAATT+TGG | + | chr2_4:52111822-52111841 | Msa0334050:intron | 40.0% | |
| AGCCACACCATCATCAATTT+GGG | + | chr2_4:52111823-52111842 | Msa0334050:intron | 40.0% | |
| !! | ATCCCAAATTGATGATGGTG+TGG | - | chr2_4:52111828-52111847 | None:intergenic | 40.0% |
| CGTCATAAGAGAGCTTCAAA+TGG | - | chr2_4:52111862-52111881 | None:intergenic | 40.0% | |
| GAGAGAACATCGAATGAGAA+CGG | + | chr2_4:52111950-52111969 | Msa0334050:CDS | 40.0% | |
| GGTTTATCGTCCAAAGTTGA+AGG | + | chr2_4:52112112-52112131 | Msa0334050:intron | 40.0% | |
| TCCAAAGTTGAAGGAGTTCT+TGG | + | chr2_4:52112121-52112140 | Msa0334050:intron | 40.0% | |
| TCCAAGAACTCCTTCAACTT+TGG | - | chr2_4:52112125-52112144 | None:intergenic | 40.0% | |
| CAAGACAATCTGAAGATGCA+AGG | - | chr2_4:52112237-52112256 | None:intergenic | 40.0% | |
| TTCTGCTAAAGATTCAGTGC+AGG | + | chr2_4:52112270-52112289 | Msa0334050:CDS | 40.0% | |
| ! | GAAGGCATGGATATTGAGTA+TGG | + | chr2_4:52112292-52112311 | Msa0334050:CDS | 40.0% |
| !! | TATGGTATGATGGATTGCAC+TGG | + | chr2_4:52112310-52112329 | Msa0334050:CDS | 40.0% |
| AGAGCAAGGTTGTACTCATT+CGG | - | chr2_4:52112818-52112837 | None:intergenic | 40.0% | |
| CTGAAACTGCATTTAACTGC+CGG | + | chr2_4:52112961-52112980 | Msa0334050:intron | 40.0% | |
| TGAAACTGCATTTAACTGCC+GGG | + | chr2_4:52112962-52112981 | Msa0334050:intron | 40.0% | |
| CTGCACTCAATCAGATTCAT+GGG | - | chr2_4:52112990-52113009 | None:intergenic | 40.0% | |
| !! | GATTTTAGCCTATCCAAAGC+CGG | - | chr2_4:52113015-52113034 | None:intergenic | 40.0% |
| ! | GTAAGCCATGTCATTTCAGT+CGG | - | chr2_4:52113281-52113300 | None:intergenic | 40.0% |
| TTACAATGTCTAGTCCCGTT+CGG | + | chr2_4:52113297-52113316 | Msa0334050:intron | 40.0% | |
| CACACTATGGACCTTATCAA+CGG | - | chr2_4:52113405-52113424 | None:intergenic | 40.0% | |
| ! | GAGTACGGACACATGTTTTA+TGG | - | chr2_4:52113435-52113454 | None:intergenic | 40.0% |
| ATAACGTCACTAACCACAAG+GGG | - | chr2_4:52113462-52113481 | None:intergenic | 40.0% | |
| ACGTTATAAACAGGCAGCAT+GGG | + | chr2_4:52113475-52113494 | Msa0334050:intron | 40.0% | |
| ATTGGAAGGTAGGTGATTAG+AGG | - | chr2_4:52113663-52113682 | None:intergenic | 40.0% | |
| TTACCGAAAGCCACATTTCA+TGG | + | chr2_4:52114093-52114112 | Msa0334050:intron | 40.0% | |
| CAACCATGAAATGTGGCTTT+CGG | - | chr2_4:52114099-52114118 | None:intergenic | 40.0% | |
| TGAGAAAACAACGGCTCTTA+CGG | - | chr2_4:52111059-52111078 | None:intergenic | 40.0% | |
| !! | ATCTTGAAGGGCACTGAATA+GGG | - | chr2_4:52114524-52114543 | None:intergenic | 40.0% |
| !!! | ACTTTGTGTTTTGGGTTAGC+AGG | - | chr2_4:52114549-52114568 | None:intergenic | 40.0% |
| TCATGGTCAAATGTGACTGA+TGG | + | chr2_4:52114741-52114760 | Msa0334050:intron | 40.0% | |
| ATAAGCAATGTGACCGCAAT+CGG | - | chr2_4:52114771-52114790 | None:intergenic | 40.0% | |
| GATCCACGACCATTACAATT+TGG | - | chr2_4:52114922-52114941 | None:intergenic | 40.0% | |
| ! | GGCATTGTTTTCTACTTCCA+TGG | + | chr2_4:52114976-52114995 | Msa0334050:CDS | 40.0% |
| ! | TTTTCTACTTCCATGGAAGG+AGG | + | chr2_4:52114983-52115002 | Msa0334050:CDS | 40.0% |
| !! | TACTTGGATTCAAGCATTGG+GGG | + | chr2_4:52111769-52111788 | Msa0334050:CDS | 40.0% |
| AAGCCACACCATCATCAATT+TGG | + | chr2_4:52111822-52111841 | Msa0334050:intron | 40.0% | |
| AGCCACACCATCATCAATTT+GGG | + | chr2_4:52111823-52111842 | Msa0334050:intron | 40.0% | |
| !! | ATCCCAAATTGATGATGGTG+TGG | - | chr2_4:52111828-52111847 | None:intergenic | 40.0% |
| TCGTCATCCCAAATTGATGA+TGG | - | chr2_4:52115159-52115178 | None:intergenic | 40.0% | |
| CGTCATAAGAGAGCTTCAAA+TGG | - | chr2_4:52111862-52111881 | None:intergenic | 40.0% | |
| GAGAGAACATCGAATGAGAA+CGG | + | chr2_4:52111950-52111969 | Msa0334050:CDS | 40.0% | |
| GGTTTATCGTCCAAAGTTGA+AGG | + | chr2_4:52112112-52112131 | Msa0334050:intron | 40.0% | |
| TCCAAAGTTGAAGGAGTTCT+TGG | + | chr2_4:52112121-52112140 | Msa0334050:intron | 40.0% | |
| TCCAAGAACTCCTTCAACTT+TGG | - | chr2_4:52112125-52112144 | None:intergenic | 40.0% | |
| ATCTGAAGAAACAAGGGATG+TGG | - | chr2_4:52115556-52115575 | None:intergenic | 40.0% | |
| GTTAAAGATTCAGTGCAGGA+AGG | + | chr2_4:52115600-52115619 | Msa0334050:CDS | 40.0% | |
| GAAGGCTTGGAGATTGAATA+TGG | + | chr2_4:52115618-52115637 | Msa0334050:CDS | 40.0% | |
| !! | TATGGTATGATGGATTGCAC+TGG | + | chr2_4:52112310-52112329 | Msa0334050:CDS | 40.0% |
| AACTATACCATTACCACTGC+TGG | - | chr2_4:52112341-52112360 | None:intergenic | 40.0% | |
| AAAACAACGGCTCTTACGGT+TGG | - | chr2_4:52111055-52111074 | None:intergenic | 45.0% | |
| GATCTTGAAGGACATTGAGC+AGG | - | chr2_4:52111096-52111115 | None:intergenic | 45.0% | |
| AAGATCACCAGCTAACCCAA+GGG | + | chr2_4:52111110-52111129 | Msa0334050:CDS | 45.0% | |
| !!! | ACTTTTTCCCTTGGGTTAGC+TGG | - | chr2_4:52111120-52111139 | None:intergenic | 45.0% |
| CAAAGATACTCGTTACCGAG+AGG | + | chr2_4:52111317-52111336 | Msa0334050:intron | 45.0% | |
| AATGCTCATTCCTCCTTCCA+TGG | - | chr2_4:52111670-52111689 | None:intergenic | 45.0% | |
| GAGGAATGAGCATTTCAGCT+TGG | + | chr2_4:52111676-52111695 | Msa0334050:CDS | 45.0% | |
| ! | ATGCTCGTTTTATCGGCCTT+AGG | + | chr2_4:52111723-52111742 | Msa0334050:CDS | 45.0% |
| GGAGACCAAGGGATTATACT+TGG | + | chr2_4:52111753-52111772 | Msa0334050:CDS | 45.0% | |
| ! | GAAGCTCTCTTATGACGGAA+AGG | + | chr2_4:52111865-52111884 | Msa0334050:intron | 45.0% |
| AAGGATCTCGTAATCCCTGA+AGG | + | chr2_4:52111884-52111903 | Msa0334050:CDS | 45.0% | |
| ! | ATCGAATGAGAACGGTGTCA+TGG | + | chr2_4:52111958-52111977 | Msa0334050:CDS | 45.0% |
| ATGGATTCTACTGTCCTCCT+TGG | - | chr2_4:52112032-52112051 | None:intergenic | 45.0% | |
| TTTCAAAATCCGGCAAAGCC+AGG | + | chr2_4:52112163-52112182 | Msa0334050:CDS | 45.0% | |
| ATCTGAAGATGCAAGGGATG+TGG | - | chr2_4:52112230-52112249 | None:intergenic | 45.0% | |
| GCTAAAGATTCAGTGCAGGA+AGG | + | chr2_4:52112274-52112293 | Msa0334050:CDS | 45.0% | |
| ! | TGTTTGTGGGTTGTACTCAG+TGG | + | chr2_4:52112433-52112452 | Msa0334050:intron | 45.0% |
| ATGTTATGGGATGTACTCGG+TGG | + | chr2_4:52112614-52112633 | Msa0334050:intron | 45.0% | |
| ! | GATGTACTCGGTGGACAAAA+TGG | + | chr2_4:52112623-52112642 | Msa0334050:intron | 45.0% |
| TGAGTACAACCTTGCTCTCT+AGG | + | chr2_4:52112820-52112839 | Msa0334050:intron | 45.0% | |
| ! | TACAACCTTGCTCTCTAGGA+AGG | + | chr2_4:52112824-52112843 | Msa0334050:intron | 45.0% |
| ! | TGAAGTGCTATGCACAAGAC+CGG | - | chr2_4:52112863-52112882 | None:intergenic | 45.0% |
| GCAACAACTCACGGAGAAAT+TGG | - | chr2_4:52112914-52112933 | None:intergenic | 45.0% | |
| CCTGCACTCAATCAGATTCA+TGG | - | chr2_4:52112991-52113010 | None:intergenic | 45.0% | |
| CCATGAATCTGATTGAGTGC+AGG | + | chr2_4:52112988-52113007 | Msa0334050:intron | 45.0% | |
| AATCTGATTGAGTGCAGGAC+CGG | + | chr2_4:52112993-52113012 | Msa0334050:intron | 45.0% | |
| TTTGGCAACAAAGTTAGCCG+AGG | + | chr2_4:52113041-52113060 | Msa0334050:intron | 45.0% | |
| ! | TCATGCCGACTGAAATGACA+TGG | + | chr2_4:52113273-52113292 | Msa0334050:intron | 45.0% |
| TACCCACAGAAATAGCCGAA+CGG | - | chr2_4:52113315-52113334 | None:intergenic | 45.0% | |
| !! | GTGTTTGTTTTCCCTCGTTG+AGG | + | chr2_4:52113337-52113356 | Msa0334050:intron | 45.0% |
| TGCTATGATCACCTCAACGA+GGG | - | chr2_4:52113351-52113370 | None:intergenic | 45.0% | |
| TGATCATAGCACCCCACTTT+CGG | + | chr2_4:52113360-52113379 | Msa0334050:intron | 45.0% | |
| ATGAAATGCAGCCGAAAGTG+GGG | - | chr2_4:52113374-52113393 | None:intergenic | 45.0% | |
| CATGAAATGCAGCCGAAAGT+GGG | - | chr2_4:52113375-52113394 | None:intergenic | 45.0% | |
| CATGGCATGATCCGTTGATA+AGG | + | chr2_4:52113391-52113410 | Msa0334050:intron | 45.0% | |
| GACGTTATAAACAGGCAGCA+TGG | + | chr2_4:52113474-52113493 | Msa0334050:intron | 45.0% | |
| CTTTGACTACACGCACGTAT+TGG | + | chr2_4:52113547-52113566 | Msa0334050:intron | 45.0% | |
| AGGCTATATCAGCCGAACTA+TGG | - | chr2_4:52113601-52113620 | None:intergenic | 45.0% | |
| ACGTGAGTGAGATGAATTGC+TGG | - | chr2_4:52114239-52114258 | None:intergenic | 45.0% | |
| AAAACAACGGCTCTTACGGT+TGG | - | chr2_4:52111055-52111074 | None:intergenic | 45.0% | |
| !! | GATCTTGAAGGGCACTGAAT+AGG | - | chr2_4:52114525-52114544 | None:intergenic | 45.0% |
| GGTTAGCAGGTGATCTTGAA+GGG | - | chr2_4:52114536-52114555 | None:intergenic | 45.0% | |
| ! | TTGCACTGAGTTTTGCACAC+AGG | - | chr2_4:52114594-52114613 | None:intergenic | 45.0% |
| CATGACTCTCCGCAATATCA+AGG | - | chr2_4:52114726-52114745 | None:intergenic | 45.0% | |
| CTTGATATTGCGGAGAGTCA+TGG | + | chr2_4:52114724-52114743 | Msa0334050:intron | 45.0% | |
| TAAGCAATGTGACCGCAATC+GGG | - | chr2_4:52114770-52114789 | None:intergenic | 45.0% | |
| ! | ATGCTCGTTTTATCGGCCTT+AGG | + | chr2_4:52111723-52111742 | Msa0334050:CDS | 45.0% |
| GGAGACCAAGGGATTATACT+TGG | + | chr2_4:52111753-52111772 | Msa0334050:CDS | 45.0% | |
| ! | GAAGCTCTCTTATGACGGAA+AGG | + | chr2_4:52111865-52111884 | Msa0334050:intron | 45.0% |
| AAGGATCTCGTAATCCCTGA+AGG | + | chr2_4:52111884-52111903 | Msa0334050:CDS | 45.0% | |
| ATGTAGAGAGGTGACCTTCA+GGG | - | chr2_4:52115227-52115246 | None:intergenic | 45.0% | |
| ! | ATCGAATGAGAACGGTGTCA+TGG | + | chr2_4:52111958-52111977 | Msa0334050:CDS | 45.0% |
| ATGGATTCTACTGTCCTCCT+TGG | - | chr2_4:52112032-52112051 | None:intergenic | 45.0% | |
| TTTCAAAATCCGGCAAAGCC+AGG | + | chr2_4:52112163-52112182 | Msa0334050:CDS | 45.0% | |
| GAAGGACATTGAGCAGGACA+AGG | - | chr2_4:52111090-52111109 | None:intergenic | 50.0% | |
| !! | GGGTTAGCTGGTGATCTTGA+AGG | - | chr2_4:52111108-52111127 | None:intergenic | 50.0% |
| CAAGATCACCAGCTAACCCA+AGG | + | chr2_4:52111109-52111128 | Msa0334050:CDS | 50.0% | |
| TAATCCCTTGGTCTCCCTAG+CGG | - | chr2_4:52111749-52111768 | None:intergenic | 50.0% | |
| ! | ATTTTCCTCGGATTGCCACG+TGG | - | chr2_4:52111918-52111937 | None:intergenic | 50.0% |
| TGGCAATGCCAGTAGTTGGA+GGG | + | chr2_4:52112188-52112207 | Msa0334050:CDS | 50.0% | |
| TTGTCTTCCCCTCCAACTAC+TGG | - | chr2_4:52112199-52112218 | None:intergenic | 50.0% | |
| AGATTCAGTGCAGGAAGGCA+TGG | + | chr2_4:52112279-52112298 | Msa0334050:CDS | 50.0% | |
| !! | GGTATGATGGATTGCACTGG+TGG | + | chr2_4:52112313-52112332 | Msa0334050:CDS | 50.0% |
| ! | CTTGCTCTCTAGGAAGGACA+GGG | + | chr2_4:52112830-52112849 | Msa0334050:intron | 50.0% |
| ! | CGTAGAGCGCTAAGTTCAGT+TGG | + | chr2_4:52113119-52113138 | Msa0334050:intron | 50.0% |
| !! | TCCCGTTCGGCTATTTCTGT+GGG | + | chr2_4:52113310-52113329 | Msa0334050:intron | 50.0% |
| ACCCACAGAAATAGCCGAAC+GGG | - | chr2_4:52113314-52113333 | None:intergenic | 50.0% | |
| GTGCTATGATCACCTCAACG+AGG | - | chr2_4:52113352-52113371 | None:intergenic | 50.0% | |
| CCATGAAATGCAGCCGAAAG+TGG | - | chr2_4:52113376-52113395 | None:intergenic | 50.0% | |
| CCACTTTCGGCTGCATTTCA+TGG | + | chr2_4:52113373-52113392 | Msa0334050:intron | 50.0% | |
| GCCTTCGCTTAACATTCCCT+CGG | + | chr2_4:52113617-52113636 | Msa0334050:intron | 50.0% | |
| ! | GGGTTAGCAGGTGATCTTGA+AGG | - | chr2_4:52114537-52114556 | None:intergenic | 50.0% |
| AAGCAATGTGACCGCAATCG+GGG | - | chr2_4:52114769-52114788 | None:intergenic | 50.0% | |
| AGTGCTCATTCCTCCTTCCA+TGG | - | chr2_4:52114996-52115015 | None:intergenic | 50.0% | |
| TAATCCCTTGGTCTCCCTTG+CGG | - | chr2_4:52115075-52115094 | None:intergenic | 50.0% | |
| CATGTAGAGAGGTGACCTTC+AGG | - | chr2_4:52115228-52115247 | None:intergenic | 50.0% | |
| CTGAAGGTCACCTCTCTACA+TGG | + | chr2_4:52115226-52115245 | Msa0334050:CDS | 50.0% | |
| TTGTCTTCCCCTCCAATGAC+CGG | - | chr2_4:52115525-52115544 | None:intergenic | 50.0% | |
| AGATTCAGTGCAGGAAGGCT+TGG | + | chr2_4:52115605-52115624 | Msa0334050:CDS | 50.0% | |
| !! | GGTATGATGGATTGCACTGG+TGG | + | chr2_4:52112313-52112332 | Msa0334050:CDS | 50.0% |
| TGCTTGGACCCTCGTTTCGT+TGG | + | chr2_4:52111620-52111639 | Msa0334050:CDS | 55.0% | |
| CATCCGCACCAACGAAACGA+GGG | - | chr2_4:52111631-52111650 | None:intergenic | 55.0% | |
| TTTATCGGCCTTAGGCCGCT+AGG | + | chr2_4:52111731-52111750 | Msa0334050:CDS | 55.0% | |
| TTATCGGCCTTAGGCCGCTA+GGG | + | chr2_4:52111732-52111751 | Msa0334050:CDS | 55.0% | |
| ACGTGGAGAGGTGACCTTCA+GGG | - | chr2_4:52111901-52111920 | None:intergenic | 55.0% | |
| CAATGTGGTGCCTGTCACCA+AGG | + | chr2_4:52112012-52112031 | Msa0334050:CDS | 55.0% | |
| ! | CTACTGTCCTCCTTGGTGAC+AGG | - | chr2_4:52112025-52112044 | None:intergenic | 55.0% |
| GTGGCAATGCCAGTAGTTGG+AGG | + | chr2_4:52112187-52112206 | Msa0334050:CDS | 55.0% | |
| GGCAATGCCAGTAGTTGGAG+GGG | + | chr2_4:52112189-52112208 | Msa0334050:CDS | 55.0% | |
| ! | GGTGGTGCTAGCAGTGGTAA+TGG | + | chr2_4:52112331-52112350 | Msa0334050:CDS | 55.0% |
| CCTGTCCTTCCTAGAGAGCA+AGG | - | chr2_4:52112832-52112851 | None:intergenic | 55.0% | |
| ! | CCTTGCTCTCTAGGAAGGAC+AGG | + | chr2_4:52112829-52112848 | Msa0334050:intron | 55.0% |
| CAATCAGATTCATGGGCGCC+CGG | - | chr2_4:52112983-52113002 | None:intergenic | 55.0% | |
| ! | ATTGAGTGCAGGACCGGCTT+TGG | + | chr2_4:52112999-52113018 | Msa0334050:intron | 55.0% |
| !! | GTCCCGTTCGGCTATTTCTG+TGG | + | chr2_4:52113309-52113328 | Msa0334050:intron | 55.0% |
| ACCACAAGGGGCGATGAGTA+CGG | - | chr2_4:52113450-52113469 | None:intergenic | 55.0% | |
| GCCGAGGGAATGTTAAGCGA+AGG | - | chr2_4:52113621-52113640 | None:intergenic | 55.0% | |
| TCGCTTAACATTCCCTCGGC+TGG | + | chr2_4:52113621-52113640 | Msa0334050:intron | 55.0% | |
| CGCTTAACATTCCCTCGGCT+GGG | + | chr2_4:52113622-52113641 | Msa0334050:intron | 55.0% | |
| TTAACATTCCCTCGGCTGGG+AGG | + | chr2_4:52113625-52113644 | Msa0334050:intron | 55.0% | |
| GACTGATGGAACCCCGATTG+CGG | + | chr2_4:52114755-52114774 | Msa0334050:intron | 55.0% | |
| TGGTCGTGGATCTGCATGCT+TGG | + | chr2_4:52114930-52114949 | Msa0334050:CDS | 55.0% | |
| GATCTGCATGCTTGGACCCT+CGG | + | chr2_4:52114938-52114957 | Msa0334050:CDS | 55.0% | |
| TTTATCGGCCTTAGGCCGCA+AGG | + | chr2_4:52115057-52115076 | Msa0334050:CDS | 55.0% | |
| TTATCGGCCTTAGGCCGCAA+GGG | + | chr2_4:52115058-52115077 | Msa0334050:CDS | 55.0% | |
| CCTCGGATTGCCATGTAGAG+AGG | - | chr2_4:52115239-52115258 | None:intergenic | 55.0% | |
| CCTCTCTACATGGCAATCCG+AGG | + | chr2_4:52115236-52115255 | Msa0334050:CDS | 55.0% | |
| CAATGTGGTGCCTGTCACCA+AGG | + | chr2_4:52112012-52112031 | Msa0334050:CDS | 55.0% | |
| ! | CTACTGTCCTCCTTGGTGAC+AGG | - | chr2_4:52112025-52112044 | None:intergenic | 55.0% |
| TGGCAATGCCGGTCATTGGA+GGG | + | chr2_4:52115514-52115533 | Msa0334050:CDS | 55.0% | |
| GGACCCTCGTTTCGTTGGTG+CGG | + | chr2_4:52111625-52111644 | Msa0334050:CDS | 60.0% | |
| CCATCCGCACCAACGAAACG+AGG | - | chr2_4:52111632-52111651 | None:intergenic | 60.0% | |
| CCTCGTTTCGTTGGTGCGGA+TGG | + | chr2_4:52111629-52111648 | Msa0334050:CDS | 60.0% | |
| TTGGTCTCCCTAGCGGCCTA+AGG | - | chr2_4:52111742-52111761 | None:intergenic | 60.0% | |
| TTAGGCCGCTAGGGAGACCA+AGG | + | chr2_4:52111741-52111760 | Msa0334050:CDS | 60.0% | |
| TAGGCCGCTAGGGAGACCAA+GGG | + | chr2_4:52111742-52111761 | Msa0334050:CDS | 60.0% | |
| CACGTGGAGAGGTGACCTTC+AGG | - | chr2_4:52111902-52111921 | None:intergenic | 60.0% | |
| CTGAAGGTCACCTCTCCACG+TGG | + | chr2_4:52111900-52111919 | Msa0334050:CDS | 60.0% | |
| TGTGGTGCCTGTCACCAAGG+AGG | + | chr2_4:52112015-52112034 | Msa0334050:CDS | 60.0% | |
| AAATCCGGCAAAGCCAGGCG+TGG | + | chr2_4:52112168-52112187 | Msa0334050:CDS | 60.0% | |
| !! | ATTGCCACGCCTGGCTTTGC+CGG | - | chr2_4:52112175-52112194 | None:intergenic | 60.0% |
| ACTACTGGCATTGCCACGCC+TGG | - | chr2_4:52112184-52112203 | None:intergenic | 60.0% | |
| GGCGTGGCAATGCCAGTAGT+TGG | + | chr2_4:52112184-52112203 | Msa0334050:CDS | 60.0% | |
| ! | TGCACTGGTGGTGCTAGCAG+TGG | + | chr2_4:52112325-52112344 | Msa0334050:CDS | 60.0% |
| GGAAGGACAGGGTTCAACGC+CGG | + | chr2_4:52112841-52112860 | Msa0334050:intron | 60.0% | |
| !! | GTGCAGGACCGGCTTTGGAT+AGG | + | chr2_4:52113004-52113023 | Msa0334050:intron | 60.0% |
| TCCGTACTCATCGCCCCTTG+TGG | + | chr2_4:52113446-52113465 | Msa0334050:intron | 60.0% | |
| ACGAGTTTCCTCCCAGCCGA+GGG | - | chr2_4:52113636-52113655 | None:intergenic | 60.0% | |
| ! | TGCTTGGACCCTCGGTTCGT+TGG | + | chr2_4:52114946-52114965 | Msa0334050:CDS | 60.0% |
| CATCCGCACCAACGAACCGA+GGG | - | chr2_4:52114957-52114976 | None:intergenic | 60.0% | |
| TTGGTCTCCCTTGCGGCCTA+AGG | - | chr2_4:52115068-52115087 | None:intergenic | 60.0% | |
| TTAGGCCGCAAGGGAGACCA+AGG | + | chr2_4:52115067-52115086 | Msa0334050:CDS | 60.0% | |
| TAGGCCGCAAGGGAGACCAA+GGG | + | chr2_4:52115068-52115087 | Msa0334050:CDS | 60.0% | |
| TGTGGTGCCTGTCACCAAGG+AGG | + | chr2_4:52112015-52112034 | Msa0334050:CDS | 60.0% | |
| AAATCCGGCAAAGCCAGGCG+TGG | + | chr2_4:52112168-52112187 | Msa0334050:CDS | 60.0% | |
| !! | ATTGCCACGCCTGGCTTTGC+CGG | - | chr2_4:52112175-52112194 | None:intergenic | 60.0% |
| AAAGCCAGGCGTGGCAATGC+CGG | + | chr2_4:52112177-52112196 | Msa0334050:CDS | 60.0% | |
| GTGGCAATGCCGGTCATTGG+AGG | + | chr2_4:52115513-52115532 | Msa0334050:CDS | 60.0% | |
| GGCAATGCCGGTCATTGGAG+GGG | + | chr2_4:52115515-52115534 | Msa0334050:CDS | 60.0% | |
| ! | GGTGGTGCCAGCAGTGGTAA+TGG | + | chr2_4:52115657-52115676 | Msa0334050:CDS | 60.0% |
| GGTCCAAGCACGCAGATCCG+CGG | - | chr2_4:52111610-52111629 | None:intergenic | 65.0% | |
| CCTCGGATTGCCACGTGGAG+AGG | - | chr2_4:52111913-52111932 | None:intergenic | 65.0% | |
| CCTCTCCACGTGGCAATCCG+AGG | + | chr2_4:52111910-52111929 | Msa0334050:CDS | 65.0% | |
| GACGAGTTTCCTCCCAGCCG+AGG | - | chr2_4:52113637-52113656 | None:intergenic | 65.0% | |
| ! | GGACCCTCGGTTCGTTGGTG+CGG | + | chr2_4:52114951-52114970 | Msa0334050:CDS | 65.0% |
| CCATCCGCACCAACGAACCG+AGG | - | chr2_4:52114958-52114977 | None:intergenic | 65.0% | |
| ! | CCTCGGTTCGTTGGTGCGGA+TGG | + | chr2_4:52114955-52114974 | Msa0334050:CDS | 65.0% |
| ATGACCGGCATTGCCACGCC+TGG | - | chr2_4:52115510-52115529 | None:intergenic | 65.0% | |
| GGCGTGGCAATGCCGGTCAT+TGG | + | chr2_4:52115510-52115529 | Msa0334050:CDS | 65.0% | |
| ! | TGCACTGGTGGTGCCAGCAG+TGG | + | chr2_4:52115651-52115670 | Msa0334050:CDS | 65.0% |
| TGGCCGCGGATCTGCGTGCT+TGG | + | chr2_4:52111604-52111623 | Msa0334050:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 52110949 | 52115698 | 52110949 | ID=Msa0334050;Name=Msa0334050 |
| chr2_4 | mRNA | 52110949 | 52115698 | 52110949 | ID=Msa0334050-mRNA-1;Parent=Msa0334050;Name=Msa0334050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0.2|0.16|6|0|601 |
| chr2_4 | exon | 52110949 | 52111186 | 52110949 | ID=Msa0334050-mRNA-1:exon:15684;Parent=Msa0334050-mRNA-1 |
| chr2_4 | exon | 52111585 | 52111790 | 52111585 | ID=Msa0334050-mRNA-1:exon:15685;Parent=Msa0334050-mRNA-1 |
| chr2_4 | exon | 52111869 | 52112112 | 52111869 | ID=Msa0334050-mRNA-1:exon:15686;Parent=Msa0334050-mRNA-1 |
| chr2_4 | exon | 52112134 | 52112357 | 52112134 | ID=Msa0334050-mRNA-1:exon:15687;Parent=Msa0334050-mRNA-1 |
| chr2_4 | exon | 52114510 | 52114615 | 52114510 | ID=Msa0334050-mRNA-1:exon:15688;Parent=Msa0334050-mRNA-1 |
| chr2_4 | exon | 52114911 | 52115698 | 52114911 | ID=Msa0334050-mRNA-1:exon:15689;Parent=Msa0334050-mRNA-1 |
| chr2_4 | CDS | 52110949 | 52111186 | 52110949 | ID=Msa0334050-mRNA-1:cds;Parent=Msa0334050-mRNA-1 |
| chr2_4 | CDS | 52111585 | 52111790 | 52111585 | ID=Msa0334050-mRNA-1:cds;Parent=Msa0334050-mRNA-1 |
| chr2_4 | CDS | 52111869 | 52112112 | 52111869 | ID=Msa0334050-mRNA-1:cds;Parent=Msa0334050-mRNA-1 |
| chr2_4 | CDS | 52112134 | 52112357 | 52112134 | ID=Msa0334050-mRNA-1:cds;Parent=Msa0334050-mRNA-1 |
| chr2_4 | CDS | 52114510 | 52114615 | 52114510 | ID=Msa0334050-mRNA-1:cds;Parent=Msa0334050-mRNA-1 |
| chr2_4 | CDS | 52114911 | 52115698 | 52114911 | ID=Msa0334050-mRNA-1:cds;Parent=Msa0334050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
