Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676190 | XP_003605789.2 | 96.730 | 367 | 12 | 0 | 1 | 367 | 4 | 370 | 0.0 | 734 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676190 | A0A396I5A5 | 96.730 | 367 | 12 | 0 | 1 | 367 | 4 | 370 | 0.0 | 734 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004580 | Msa0676190 | 0.823282 | 1.506768e-53 | -8.615850e-47 |
| Msa0004590 | Msa0676190 | 0.830512 | 2.817296e-55 | -8.615850e-47 |
| Msa0006050 | Msa0676190 | -0.812235 | 4.695433e-51 | -8.615850e-47 |
| Msa0012820 | Msa0676190 | 0.803871 | 2.834876e-49 | -8.615850e-47 |
| Msa0025700 | Msa0676190 | 0.828547 | 8.463078e-55 | -8.615850e-47 |
| Msa0036550 | Msa0676190 | 0.803159 | 3.982172e-49 | -8.615850e-47 |
| Msa0043840 | Msa0676190 | 0.821000 | 5.093871e-53 | -8.615850e-47 |
| Msa0045620 | Msa0676190 | 0.803808 | 2.920833e-49 | -8.615850e-47 |
| Msa0048950 | Msa0676190 | 0.865927 | 4.137952e-65 | -8.615850e-47 |
| Msa0059880 | Msa0676190 | 0.843959 | 1.016513e-58 | -8.615850e-47 |
| Msa0061600 | Msa0676190 | 0.810098 | 1.364342e-50 | -8.615850e-47 |
| Msa0072030 | Msa0676190 | 0.809680 | 1.678700e-50 | -8.615850e-47 |
| Msa0084160 | Msa0676190 | 0.801042 | 1.084897e-48 | -8.615850e-47 |
| Msa0084390 | Msa0676190 | 0.808768 | 2.632497e-50 | -8.615850e-47 |
| Msa0090500 | Msa0676190 | 0.827973 | 1.163490e-54 | -8.615850e-47 |
| Msa0102920 | Msa0676190 | 0.819158 | 1.345386e-52 | -8.615850e-47 |
| Msa0102930 | Msa0676190 | 0.802245 | 6.146416e-49 | -8.615850e-47 |
| Msa0106130 | Msa0676190 | 0.811300 | 7.501484e-51 | -8.615850e-47 |
| Msa0603950 | Msa0676190 | 0.847805 | 9.166584e-60 | -8.615850e-47 |
| Msa0605350 | Msa0676190 | 0.804741 | 1.867775e-49 | -8.615850e-47 |
| Msa0605400 | Msa0676190 | 0.805134 | 1.545386e-49 | -8.615850e-47 |
| Msa0605410 | Msa0676190 | 0.822298 | 2.552666e-53 | -8.615850e-47 |
| Msa0605460 | Msa0676190 | 0.807776 | 4.285009e-50 | -8.615850e-47 |
| Msa0605470 | Msa0676190 | 0.839475 | 1.549773e-57 | -8.615850e-47 |
| Msa0610190 | Msa0676190 | 0.810902 | 9.150092e-51 | -8.615850e-47 |
| Msa0623310 | Msa0676190 | 0.808612 | 2.842835e-50 | -8.615850e-47 |
| Msa0623980 | Msa0676190 | 0.844214 | 8.681841e-59 | -8.615850e-47 |
| Msa0624050 | Msa0676190 | 0.943469 | 1.137675e-102 | -8.615850e-47 |
| Msa0624930 | Msa0676190 | 0.813280 | 2.771887e-51 | -8.615850e-47 |
| Msa0626980 | Msa0676190 | 0.816700 | 4.829863e-52 | -8.615850e-47 |
| Msa0627360 | Msa0676190 | 0.817789 | 2.747664e-52 | -8.615850e-47 |
| Msa0640290 | Msa0676190 | 0.801071 | 1.070175e-48 | -8.615850e-47 |
| Msa0643840 | Msa0676190 | 0.803575 | 3.265855e-49 | -8.615850e-47 |
| Msa0645060 | Msa0676190 | 0.801455 | 8.932598e-49 | -8.615850e-47 |
| Msa0645120 | Msa0676190 | 0.816369 | 5.731467e-52 | -8.615850e-47 |
| Msa0646210 | Msa0676190 | 0.806960 | 6.380803e-50 | -8.615850e-47 |
| Msa0651090 | Msa0676190 | 0.828660 | 7.943640e-55 | -8.615850e-47 |
| Msa0667600 | Msa0676190 | 0.813554 | 2.413532e-51 | -8.615850e-47 |
| Msa0668220 | Msa0676190 | 0.816060 | 6.716947e-52 | -8.615850e-47 |
| Msa0670360 | Msa0676190 | 0.814027 | 1.899090e-51 | -8.615850e-47 |
| Msa0671400 | Msa0676190 | 0.815063 | 1.120243e-51 | -8.615850e-47 |
| Msa0673940 | Msa0676190 | 0.829357 | 5.387260e-55 | -8.615850e-47 |
| Msa0676140 | Msa0676190 | 0.979279 | 1.278022e-147 | -8.615850e-47 |
| Msa0676190 | Msa0676200 | 0.864432 | 1.221287e-64 | -8.615850e-47 |
| Msa0676190 | Msa0678620 | 0.849233 | 3.687726e-60 | -8.615850e-47 |
| Msa0676190 | Msa0684560 | 0.804592 | 2.006116e-49 | -8.615850e-47 |
| Msa0676190 | Msa0684720 | 0.836026 | 1.191158e-56 | -8.615850e-47 |
| Msa0676190 | Msa0705810 | -0.806299 | 8.800719e-50 | -8.615850e-47 |
| Msa0676190 | Msa0715510 | 0.814721 | 1.333828e-51 | -8.615850e-47 |
| Msa0676190 | Msa0716600 | 0.814020 | 1.905601e-51 | -8.615850e-47 |
| Msa0676190 | Msa0716980 | 0.814132 | 1.799698e-51 | -8.615850e-47 |
| Msa0676190 | Msa0727480 | 0.819582 | 1.076918e-52 | -8.615850e-47 |
| Msa0676190 | Msa0735340 | 0.830631 | 2.634460e-55 | -8.615850e-47 |
| Msa0676190 | Msa0758000 | 0.805968 | 1.032991e-49 | -8.615850e-47 |
| Msa0676190 | Msa0758150 | 0.808767 | 2.634541e-50 | -8.615850e-47 |
| Msa0676190 | Msa0761830 | 0.803580 | 3.258259e-49 | -8.615850e-47 |
| Msa0676190 | Msa0768670 | 0.827570 | 1.454019e-54 | -8.615850e-47 |
| Msa0676190 | Msa0768720 | 0.832220 | 1.070406e-55 | -8.615850e-47 |
| Msa0676190 | Msa0777210 | 0.804230 | 2.386862e-49 | -8.615850e-47 |
| Msa0676190 | Msa0787860 | 0.802856 | 4.599103e-49 | -8.615850e-47 |
| Msa0676190 | Msa0791300 | 0.854566 | 1.130005e-61 | -8.615850e-47 |
| Msa0676190 | Msa0793100 | -0.800719 | 1.262833e-48 | -8.615850e-47 |
| Msa0676190 | Msa0798240 | 0.804927 | 1.707466e-49 | -8.615850e-47 |
| Msa0676190 | Msa0804170 | 0.808092 | 3.670805e-50 | -8.615850e-47 |
| Msa0676190 | Msa0816140 | 0.800848 | 1.189014e-48 | -8.615850e-47 |
| Msa0676190 | Msa0817100 | 0.822970 | 1.781077e-53 | -8.615850e-47 |
| Msa0676190 | Msa0824850 | 0.802552 | 5.313871e-49 | -8.615850e-47 |
| Msa0676190 | Msa0824860 | 0.800713 | 1.266775e-48 | -8.615850e-47 |
| Msa0676190 | Msa0847140 | 0.805297 | 1.429042e-49 | -8.615850e-47 |
| Msa0676190 | Msa0854840 | 0.800557 | 1.362737e-48 | -8.615850e-47 |
| Msa0676190 | Msa0863840 | 0.816504 | 5.343722e-52 | -8.615850e-47 |
| Msa0676190 | Msa0864160 | 0.815991 | 6.961393e-52 | -8.615850e-47 |
| Msa0676190 | Msa0871420 | 0.815404 | 9.408752e-52 | -8.615850e-47 |
| Msa0676190 | Msa0883640 | 0.863718 | 2.038543e-64 | -8.615850e-47 |
| Msa0676190 | Msa0893840 | 0.801179 | 1.017326e-48 | -8.615850e-47 |
| Msa0676190 | Msa0898060 | 0.818142 | 2.287671e-52 | -8.615850e-47 |
| Msa0676190 | Msa0902340 | 0.845666 | 3.522574e-59 | -8.615850e-47 |
| Msa0676190 | Msa0910590 | 0.802371 | 5.790706e-49 | -8.615850e-47 |
| Msa0676190 | Msa0910830 | 0.861427 | 1.034031e-63 | -8.615850e-47 |
| Msa0676190 | Msa0924490 | 0.804100 | 2.540622e-49 | -8.615850e-47 |
| Msa0676190 | Msa0931370 | 0.812433 | 4.250283e-51 | -8.615850e-47 |
| Msa0676190 | Msa0933610 | 0.805489 | 1.302331e-49 | -8.615850e-47 |
| Msa0676190 | Msa0960090 | 0.865237 | 6.831512e-65 | -8.615850e-47 |
| Msa0676190 | Msa0973770 | 0.809030 | 2.314381e-50 | -8.615850e-47 |
| Msa0676190 | Msa0973890 | -0.823593 | 1.273931e-53 | -8.615850e-47 |
| Msa0676190 | Msa0985700 | 0.864073 | 1.580981e-64 | -8.615850e-47 |
| Msa0676190 | Msa0993450 | 0.808361 | 3.216806e-50 | -8.615850e-47 |
| Msa0676190 | Msa1003110 | 0.813862 | 2.064893e-51 | -8.615850e-47 |
| Msa0676190 | Msa1020540 | 0.800675 | 1.289310e-48 | -8.615850e-47 |
| Msa0676190 | Msa1021620 | 0.838672 | 2.502033e-57 | -8.615850e-47 |
| Msa0676190 | Msa1024350 | 0.803362 | 3.614313e-49 | -8.615850e-47 |
| Msa0676190 | Msa1026050 | 0.816817 | 4.548471e-52 | -8.615850e-47 |
| Msa0676190 | Msa1036020 | 0.817716 | 2.853786e-52 | -8.615850e-47 |
| Msa0676190 | Msa1036590 | 0.804028 | 2.628990e-49 | -8.615850e-47 |
| Msa0676190 | Msa1037350 | 0.806560 | 7.753266e-50 | -8.615850e-47 |
| Msa0676190 | Msa1040730 | 0.820282 | 7.448980e-53 | -8.615850e-47 |
| Msa0676190 | Msa1046220 | 0.810540 | 1.095706e-50 | -8.615850e-47 |
| Msa0676190 | Msa1061670 | 0.844931 | 5.568190e-59 | -8.615850e-47 |
| Msa0676190 | Msa1061760 | 0.801629 | 8.226671e-49 | -8.615850e-47 |
| Msa0676190 | Msa1064940 | 0.807976 | 3.885320e-50 | -8.615850e-47 |
| Msa0676190 | Msa1076520 | -0.800321 | 1.522337e-48 | -8.615850e-47 |
| Msa0676190 | Msa1076830 | 0.845573 | 3.733479e-59 | -8.615850e-47 |
| Msa0676190 | Msa1076900 | 0.805506 | 1.291700e-49 | -8.615850e-47 |
| Msa0676190 | Msa1078300 | 0.823992 | 1.027150e-53 | -8.615850e-47 |
| Msa0676190 | Msa1081610 | 0.804041 | 2.613149e-49 | -8.615850e-47 |
| Msa0676190 | Msa1085560 | 0.818680 | 1.727616e-52 | -8.615850e-47 |
| Msa0676190 | Msa1087380 | 0.806758 | 7.042250e-50 | -8.615850e-47 |
| Msa0676190 | Msa1106960 | 0.832354 | 9.914347e-56 | -8.615850e-47 |
| Msa0676190 | Msa1109880 | 0.829621 | 4.647102e-55 | -8.615850e-47 |
| Msa0676190 | Msa1109890 | 0.857358 | 1.723652e-62 | -8.615850e-47 |
| Msa0676190 | Msa1130770 | 0.825926 | 3.591490e-54 | -8.615850e-47 |
| Msa0676190 | Msa1133860 | 0.811693 | 6.163598e-51 | -8.615850e-47 |
| Msa0676190 | Msa1149020 | 0.820368 | 7.115703e-53 | -8.615850e-47 |
| Msa0676190 | Msa1150860 | 0.806766 | 7.014379e-50 | -8.615850e-47 |
| Msa0676190 | Msa1150880 | 0.811134 | 8.150262e-51 | -8.615850e-47 |
| Msa0676190 | Msa1156670 | 0.801574 | 8.442798e-49 | -8.615850e-47 |
| Msa0676190 | Msa1164240 | 0.803965 | 2.709951e-49 | -8.615850e-47 |
| Msa0676190 | Msa1170320 | 0.822827 | 1.923127e-53 | -8.615850e-47 |
| Msa0676190 | Msa1187900 | 0.818381 | 2.018942e-52 | -8.615850e-47 |
| Msa0676190 | Msa1211160 | 0.810805 | 9.602751e-51 | -8.615850e-47 |
| Msa0676190 | Msa1211320 | 0.806335 | 8.645524e-50 | -8.615850e-47 |
| Msa0676190 | Msa1214960 | 0.826407 | 2.759150e-54 | -8.615850e-47 |
| Msa0676190 | Msa1216120 | 0.808010 | 3.821569e-50 | -8.615850e-47 |
| Msa0676190 | Msa1216370 | 0.805086 | 1.581886e-49 | -8.615850e-47 |
| Msa0676190 | Msa1216600 | 0.830239 | 3.284962e-55 | -8.615850e-47 |
| Msa0676190 | Msa1219780 | 0.801522 | 8.654100e-49 | -8.615850e-47 |
| Msa0676190 | Msa1220720 | 0.814521 | 1.476786e-51 | -8.615850e-47 |
| Msa0676190 | Msa1255710 | 0.810229 | 1.279075e-50 | -8.615850e-47 |
| Msa0676190 | Msa1265570 | 0.813682 | 2.262526e-51 | -8.615850e-47 |
| Msa0676190 | Msa1266710 | 0.803021 | 4.252889e-49 | -8.615850e-47 |
| Msa0676190 | Msa1269050 | 0.807080 | 6.018234e-50 | -8.615850e-47 |
| Msa0676190 | Msa1286420 | 0.824832 | 6.518606e-54 | -8.615850e-47 |
| Msa0676190 | Msa1288970 | -0.821781 | 3.363600e-53 | -8.615850e-47 |
| Msa0676190 | Msa1296870 | 0.826735 | 2.304705e-54 | -8.615850e-47 |
| Msa0676190 | Msa1299310 | 0.817786 | 2.752714e-52 | -8.615850e-47 |
| Msa0676190 | Msa1300610 | 0.814352 | 1.609942e-51 | -8.615850e-47 |
| Msa0676190 | Msa1323030 | 0.836665 | 8.192043e-57 | -8.615850e-47 |
| Msa0676190 | Msa1323120 | 0.811298 | 7.507554e-51 | -8.615850e-47 |
| Msa0676190 | Msa1323160 | 0.806530 | 7.864472e-50 | -8.615850e-47 |
| Msa0676190 | Msa1329740 | 0.812801 | 3.530494e-51 | -8.615850e-47 |
| Msa0676190 | Msa1329770 | 0.801704 | 7.942404e-49 | -8.615850e-47 |
| Msa0676190 | Msa1334670 | 0.812433 | 4.250005e-51 | -8.615850e-47 |
| Msa0676190 | Msa1335500 | 0.808857 | 2.520652e-50 | -8.615850e-47 |
| Msa0676190 | Msa1341030 | 0.804262 | 2.350938e-49 | -8.615850e-47 |
| Msa0676190 | Msa1357490 | 0.842376 | 2.686096e-58 | -8.615850e-47 |
| Msa0676190 | Msa1357860 | 0.827304 | 1.684513e-54 | -8.615850e-47 |
| Msa0676190 | Msa1362590 | 0.811566 | 6.565580e-51 | -8.615850e-47 |
| Msa0676190 | Msa1363690 | 0.817732 | 2.831019e-52 | -8.615850e-47 |
| Msa0676190 | Msa1365230 | 0.814899 | 1.217978e-51 | -8.615850e-47 |
| Msa0676190 | Msa1365850 | 0.806701 | 7.238630e-50 | -8.615850e-47 |
| Msa0676190 | Msa1370930 | 0.810266 | 1.255786e-50 | -8.615850e-47 |
| Msa0676190 | Msa1371800 | 0.808781 | 2.615857e-50 | -8.615850e-47 |
| Msa0676190 | Msa1373560 | 0.835642 | 1.490226e-56 | -8.615850e-47 |
| Msa0676190 | Msa1376070 | 0.850435 | 1.701656e-60 | -8.615850e-47 |
| Msa0676190 | Msa1376310 | 0.805456 | 1.323421e-49 | -8.615850e-47 |
| Msa0676190 | Msa1377460 | 0.812865 | 3.419395e-51 | -8.615850e-47 |
| Msa0676190 | Msa1377520 | 0.819116 | 1.375195e-52 | -8.615850e-47 |
| Msa0676190 | Msa1378400 | 0.962942 | 1.755637e-121 | -8.615850e-47 |
| Msa0676190 | Msa1378950 | 0.813681 | 2.262854e-51 | -8.615850e-47 |
| Msa0676190 | Msa1380490 | 0.802886 | 4.534525e-49 | -8.615850e-47 |
| Msa0676190 | Msa1393440 | 0.813366 | 2.654757e-51 | -8.615850e-47 |
| Msa0676190 | Msa1396550 | 0.822176 | 2.725399e-53 | -8.615850e-47 |
| Msa0676190 | Msa1407210 | 0.802274 | 6.064868e-49 | -8.615850e-47 |
| Msa0676190 | Msa1407670 | 0.844053 | 9.590379e-59 | -8.615850e-47 |
| Msa0676190 | Msa1409600 | 0.803698 | 3.079501e-49 | -8.615850e-47 |
| Msa0676190 | Msa1411550 | 0.811570 | 6.551940e-51 | -8.615850e-47 |
| Msa0676190 | Msa1413020 | 0.811498 | 6.795542e-51 | -8.615850e-47 |
| Msa0676190 | Msa1417220 | 0.806022 | 1.006592e-49 | -8.615850e-47 |
| Msa0676190 | Msa1417950 | 0.829101 | 6.214016e-55 | -8.615850e-47 |
| Msa0676190 | Msa1420020 | 0.836303 | 1.012537e-56 | -8.615850e-47 |
| Msa0676190 | Msa1421120 | 0.858267 | 9.262523e-63 | -8.615850e-47 |
| Msa0676190 | Msa1421130 | 0.814100 | 1.829459e-51 | -8.615850e-47 |
| Msa0676190 | Msa1421540 | 0.813958 | 1.966868e-51 | -8.615850e-47 |
| Msa0676190 | Msa1426420 | 0.828679 | 7.862473e-55 | -8.615850e-47 |
| Msa0676190 | Msa1434700 | 0.819835 | 9.425470e-53 | -8.615850e-47 |
| Msa0676190 | Msa1447900 | 0.831425 | 1.681147e-55 | -8.615850e-47 |
| Msa0676190 | Msa1449770 | 0.848802 | 4.858362e-60 | -8.615850e-47 |
| Msa0676190 | Msa1451660 | 0.800712 | 1.267333e-48 | -8.615850e-47 |
| Msa0676190 | Msa1459610 | 0.823471 | 1.360751e-53 | -8.615850e-47 |
| Msa0128340 | Msa0676190 | 0.801915 | 7.188189e-49 | -8.615850e-47 |
| Msa0128740 | Msa0676190 | 0.808736 | 2.674607e-50 | -8.615850e-47 |
| Msa0129270 | Msa0676190 | 0.806813 | 6.854839e-50 | -8.615850e-47 |
| Msa0130710 | Msa0676190 | 0.812229 | 4.708367e-51 | -8.615850e-47 |
| Msa0131460 | Msa0676190 | 0.802182 | 6.334856e-49 | -8.615850e-47 |
| Msa0137970 | Msa0676190 | 0.833459 | 5.269985e-56 | -8.615850e-47 |
| Msa0139460 | Msa0676190 | 0.803263 | 3.789169e-49 | -8.615850e-47 |
| Msa0140270 | Msa0676190 | 0.814069 | 1.859033e-51 | -8.615850e-47 |
| Msa0143710 | Msa0676190 | 0.805064 | 1.598473e-49 | -8.615850e-47 |
| Msa0147670 | Msa0676190 | 0.844170 | 8.924286e-59 | -8.615850e-47 |
| Msa0147680 | Msa0676190 | 0.832181 | 1.094317e-55 | -8.615850e-47 |
| Msa0150910 | Msa0676190 | 0.828886 | 7.006656e-55 | -8.615850e-47 |
| Msa0163340 | Msa0676190 | 0.802420 | 5.656989e-49 | -8.615850e-47 |
| Msa0163370 | Msa0676190 | 0.800202 | 1.609647e-48 | -8.615850e-47 |
| Msa0183920 | Msa0676190 | 0.813353 | 2.672074e-51 | -8.615850e-47 |
| Msa0190670 | Msa0676190 | 0.808850 | 2.528726e-50 | -8.615850e-47 |
| Msa0190890 | Msa0676190 | 0.809004 | 2.344502e-50 | -8.615850e-47 |
| Msa0210850 | Msa0676190 | 0.816421 | 5.577987e-52 | -8.615850e-47 |
| Msa0212550 | Msa0676190 | 0.812264 | 4.627191e-51 | -8.615850e-47 |
| Msa0219210 | Msa0676190 | 0.823991 | 1.027968e-53 | -8.615850e-47 |
| Msa0225910 | Msa0676190 | 0.804161 | 2.467119e-49 | -8.615850e-47 |
| Msa0235080 | Msa0676190 | 0.822353 | 2.479017e-53 | -8.615850e-47 |
| Msa0369880 | Msa0676190 | 0.800394 | 1.471182e-48 | -8.615850e-47 |
| Msa0374130 | Msa0676190 | 0.830100 | 3.551020e-55 | -8.615850e-47 |
| Msa0414480 | Msa0676190 | 0.800138 | 1.659081e-48 | -8.615850e-47 |
| Msa0430460 | Msa0676190 | 0.806974 | 6.337729e-50 | -8.615850e-47 |
| Msa0444200 | Msa0676190 | 0.850264 | 1.900580e-60 | -8.615850e-47 |
| Msa0464160 | Msa0676190 | 0.801488 | 8.794882e-49 | -8.615850e-47 |
| Msa0469550 | Msa0676190 | 0.834084 | 3.676837e-56 | -8.615850e-47 |
| Msa0259300 | Msa0676190 | 0.809478 | 1.854916e-50 | -8.615850e-47 |
| Msa0260980 | Msa0676190 | 0.818847 | 1.582649e-52 | -8.615850e-47 |
| Msa0273360 | Msa0676190 | 0.823664 | 1.226301e-53 | -8.615850e-47 |
| Msa0274250 | Msa0676190 | 0.800145 | 1.653026e-48 | -8.615850e-47 |
| Msa0275570 | Msa0676190 | 0.802751 | 4.834822e-49 | -8.615850e-47 |
| Msa0278480 | Msa0676190 | 0.802849 | 4.614686e-49 | -8.615850e-47 |
| Msa0278940 | Msa0676190 | 0.815679 | 8.170042e-52 | -8.615850e-47 |
| Msa0278950 | Msa0676190 | 0.810211 | 1.290396e-50 | -8.615850e-47 |
| Msa0295980 | Msa0676190 | 0.825344 | 4.933110e-54 | -8.615850e-47 |
| Msa0298270 | Msa0676190 | 0.831670 | 1.463264e-55 | -8.615850e-47 |
| Msa0327890 | Msa0676190 | 0.807692 | 4.465304e-50 | -8.615850e-47 |
| Msa0333940 | Msa0676190 | 0.838459 | 2.840428e-57 | -8.615850e-47 |
| Msa0334050 | Msa0676190 | 0.831336 | 1.768466e-55 | -8.615850e-47 |
| Msa0336430 | Msa0676190 | 0.821812 | 3.308316e-53 | -8.615850e-47 |
| Msa0336460 | Msa0676190 | 0.802951 | 4.396944e-49 | -8.615850e-47 |
| Msa0336520 | Msa0676190 | 0.841800 | 3.814076e-58 | -8.615850e-47 |
| Msa0343720 | Msa0676190 | 0.804346 | 2.257364e-49 | -8.615850e-47 |
| Msa0349910 | Msa0676190 | 0.801571 | 8.454467e-49 | -8.615850e-47 |
| Msa0491760 | Msa0676190 | 0.857850 | 1.232169e-62 | -8.615850e-47 |
| Msa0491770 | Msa0676190 | 0.828147 | 1.056544e-54 | -8.615850e-47 |
| Msa0509630 | Msa0676190 | 0.806892 | 6.596710e-50 | -8.615850e-47 |
| Msa0515260 | Msa0676190 | 0.829709 | 4.423961e-55 | -8.615850e-47 |
| Msa0529360 | Msa0676190 | 0.821463 | 3.985230e-53 | -8.615850e-47 |
| Msa0530660 | Msa0676190 | 0.816872 | 4.420350e-52 | -8.615850e-47 |
| Msa0535570 | Msa0676190 | 0.804201 | 2.420187e-49 | -8.615850e-47 |
| Msa0538450 | Msa0676190 | 0.800834 | 1.196596e-48 | -8.615850e-47 |
| Msa0538520 | Msa0676190 | 0.805941 | 1.046866e-49 | -8.615850e-47 |
| Msa0548760 | Msa0676190 | 0.805605 | 1.231674e-49 | -8.615850e-47 |
| Msa0548970 | Msa0676190 | 0.822950 | 1.800348e-53 | -8.615850e-47 |
| Msa0549920 | Msa0676190 | 0.806260 | 8.970004e-50 | -8.615850e-47 |
| Msa0549930 | Msa0676190 | 0.800677 | 1.288458e-48 | -8.615850e-47 |
| Msa0577050 | Msa0676190 | -0.806870 | 6.667043e-50 | -8.615850e-47 |
| Msa0584970 | Msa0676190 | 0.848056 | 7.815014e-60 | -8.615850e-47 |
| Msa0587180 | Msa0676190 | 0.834043 | 3.765833e-56 | -8.615850e-47 |
| Msa0589740 | Msa0676190 | 0.802028 | 6.812247e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676190 | MtrunA17_Chr4g0019571 | 96.730 | 367 | 12 | 0 | 1 | 367 | 4 | 370 | 0.0 | 734 |
| Msa0676190 | MtrunA17_Chr4g0019601 | 87.193 | 367 | 47 | 0 | 1 | 367 | 4 | 370 | 0.0 | 677 |
| Msa0676190 | MtrunA17_Chr4g0019581 | 87.052 | 363 | 47 | 0 | 5 | 367 | 77 | 439 | 0.0 | 672 |
| Msa0676190 | MtrunA17_Chr3g0089391 | 81.199 | 367 | 69 | 0 | 1 | 367 | 1 | 367 | 0.0 | 614 |
| Msa0676190 | MtrunA17_Chr1g0149051 | 54.545 | 330 | 148 | 2 | 34 | 361 | 39 | 368 | 3.78e-131 | 380 |
| Msa0676190 | MtrunA17_Chr2g0332541 | 47.904 | 334 | 168 | 2 | 34 | 361 | 28 | 361 | 1.79e-111 | 330 |
| Msa0676190 | MtrunA17_Chr2g0286051 | 43.161 | 329 | 186 | 1 | 34 | 361 | 35 | 363 | 3.13e-96 | 291 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676190 | AT3G08030.1 | 67.941 | 340 | 108 | 1 | 29 | 367 | 26 | 365 | 1.67e-175 | 493 |
| Msa0676190 | AT3G08030.2 | 68.731 | 323 | 100 | 1 | 46 | 367 | 1 | 323 | 3.78e-169 | 474 |
| Msa0676190 | AT2G41810.1 | 58.101 | 358 | 143 | 3 | 11 | 361 | 7 | 364 | 3.18e-150 | 429 |
| Msa0676190 | AT2G41800.1 | 60.241 | 332 | 131 | 1 | 34 | 364 | 36 | 367 | 4.87e-150 | 428 |
| Msa0676190 | AT5G11420.1 | 55.623 | 329 | 145 | 1 | 34 | 361 | 30 | 358 | 3.00e-135 | 390 |
| Msa0676190 | AT5G25460.1 | 52.210 | 362 | 171 | 2 | 1 | 361 | 1 | 361 | 7.88e-135 | 389 |
| Msa0676190 | AT4G32460.2 | 53.799 | 329 | 151 | 1 | 34 | 361 | 29 | 357 | 1.03e-131 | 381 |
| Msa0676190 | AT4G32460.1 | 53.799 | 329 | 151 | 1 | 34 | 361 | 29 | 357 | 1.03e-131 | 381 |
| Msa0676190 | AT4G32460.4 | 54.259 | 317 | 144 | 1 | 46 | 361 | 1 | 317 | 2.47e-129 | 374 |
| Msa0676190 | AT4G32460.3 | 54.259 | 317 | 144 | 1 | 46 | 361 | 1 | 317 | 2.47e-129 | 374 |
| Msa0676190 | AT1G80240.1 | 50.152 | 329 | 163 | 1 | 34 | 361 | 32 | 360 | 5.76e-114 | 336 |
| Msa0676190 | AT1G29980.2 | 42.308 | 338 | 185 | 2 | 34 | 361 | 7 | 344 | 1.94e-96 | 291 |
| Msa0676190 | AT1G29980.1 | 42.308 | 338 | 185 | 2 | 34 | 361 | 43 | 380 | 7.07e-96 | 291 |
| Msa0676190 | AT2G34510.1 | 42.515 | 334 | 186 | 2 | 34 | 361 | 43 | 376 | 5.04e-94 | 286 |
| Msa0676190 | AT2G34510.2 | 43.793 | 290 | 157 | 2 | 78 | 361 | 1 | 290 | 3.42e-84 | 258 |
| Msa0676190 | AT5G14150.2 | 27.733 | 375 | 232 | 12 | 11 | 367 | 8 | 361 | 8.51e-31 | 121 |
| Msa0676190 | AT5G14150.1 | 27.733 | 375 | 232 | 12 | 11 | 367 | 8 | 361 | 8.51e-31 | 121 |
Find 102 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTGTTGTGTTGAAAAT+AGG | 0.118027 | 4_4:-26427909 | None:intergenic |
| CTTTGAATCAATAAATTTAA+TGG | 0.130784 | 4_4:-26428003 | None:intergenic |
| GCCTATATTTGCAGATAATT+TGG | 0.140639 | 4_4:+26427854 | Msa0676190:intron |
| CTTAAAGTTTACTTCCAAAA+TGG | 0.175065 | 4_4:+26426385 | Msa0676190:intron |
| CTTGTTTCCTTTATGAATCT+TGG | 0.194424 | 4_4:-26426430 | None:intergenic |
| TCCTACTTGTGGTCCACTTT+TGG | 0.248583 | 4_4:+26426819 | Msa0676190:CDS |
| TCTCTTCAAAGTTCCCATTT+TGG | 0.257255 | 4_4:-26426399 | None:intergenic |
| TTCATATTGTAGACTTTGTT+TGG | 0.283032 | 4_4:-26428110 | None:intergenic |
| CATTTGTTGTGTTGAAAATA+GGG | 0.295242 | 4_4:-26427908 | None:intergenic |
| CATACAAGGATTGATGATAT+TGG | 0.295621 | 4_4:+26428314 | Msa0676190:CDS |
| TCCTTTATGAATCTTGGGTT+TGG | 0.305420 | 4_4:-26426424 | None:intergenic |
| CAATGGTATGCTCTAATATT+AGG | 0.315217 | 4_4:+26426622 | Msa0676190:CDS |
| CAGGTTTGACCTTGATGGTT+TGG | 0.315262 | 4_4:-26426597 | None:intergenic |
| AAAGTTCCTTTCAAATCTTT+AGG | 0.319577 | 4_4:+26428209 | Msa0676190:CDS |
| TAGACCATTGATTTCCCATT+TGG | 0.321175 | 4_4:-26426476 | None:intergenic |
| AATAAATTTAATGGCTTTGA+GGG | 0.322824 | 4_4:-26427994 | None:intergenic |
| CTTCTTGCATACCAGGGTTA+TGG | 0.328613 | 4_4:-26426795 | None:intergenic |
| TTGTTTCCTTTATGAATCTT+GGG | 0.332661 | 4_4:-26426429 | None:intergenic |
| CAATGGTGATGTTATTGCTT+GGG | 0.353561 | 4_4:+26426735 | Msa0676190:CDS |
| AAGAATTTCCAAGTGCCATT+TGG | 0.355884 | 4_4:+26428023 | Msa0676190:CDS |
| AGGTTTGACCTTGATGGTTT+GGG | 0.356574 | 4_4:-26426596 | None:intergenic |
| TTGACCAGGTTTGACCTTGA+TGG | 0.371778 | 4_4:-26426602 | None:intergenic |
| GACACAAGATCTTGTTGCTT+TGG | 0.386124 | 4_4:-26427945 | None:intergenic |
| GAAAACATTCACTTCCCAAA+TGG | 0.392506 | 4_4:+26426461 | Msa0676190:CDS |
| GGAGCAGTGGAGCTTGTTGC+AGG | 0.392515 | 4_4:+26428050 | Msa0676190:CDS |
| TTGTGTCACCACTCCCTGGC+TGG | 0.399232 | 4_4:+26427961 | Msa0676190:CDS |
| TTAAAGTTTACTTCCAAAAT+GGG | 0.399296 | 4_4:+26426386 | Msa0676190:intron |
| CAATAAATTTAATGGCTTTG+AGG | 0.405241 | 4_4:-26427995 | None:intergenic |
| CAAACACTTTATAGCCTCAA+TGG | 0.405480 | 4_4:+26426718 | Msa0676190:CDS |
| TGTTATTGCTTGGGGATTCA+AGG | 0.409886 | 4_4:+26426744 | Msa0676190:CDS |
| AACATTACCTTCTGGTGACC+TGG | 0.416189 | 4_4:-26425821 | None:intergenic |
| ATCTCAGTGCCTCCACAATC+TGG | 0.419190 | 4_4:+26426682 | Msa0676190:CDS |
| GCCAAACCCAAGATTCATAA+AGG | 0.423787 | 4_4:+26426423 | Msa0676190:CDS |
| TACAATATGAAATTCACAAT+TGG | 0.427534 | 4_4:+26428122 | Msa0676190:CDS |
| GACCTTGATGGTTTGGGAGA+TGG | 0.428706 | 4_4:-26426590 | None:intergenic |
| ATAAAGGAAACAAGACTCAT+TGG | 0.440193 | 4_4:+26426439 | Msa0676190:CDS |
| AGACCATTGATTTCCCATTT+GGG | 0.443676 | 4_4:-26426475 | None:intergenic |
| TTCCAAGTGCCATTTGGAAA+AGG | 0.444677 | 4_4:+26428029 | Msa0676190:CDS |
| AAAACATTCACTTCCCAAAT+GGG | 0.451562 | 4_4:+26426462 | Msa0676190:CDS |
| CATTGTTCATTACCTCTTGT+CGG | 0.452200 | 4_4:-26426877 | None:intergenic |
| ACAAGATCTTGTTGCTTTGG+AGG | 0.453040 | 4_4:-26427942 | None:intergenic |
| AAGAACATGCCTCCAGGTTG+TGG | 0.457371 | 4_4:-26426520 | None:intergenic |
| CCTTTCAAATCTTTAGGAAA+GGG | 0.458801 | 4_4:+26428215 | Msa0676190:CDS |
| GTAGGATCTTCTTGCATACC+AGG | 0.469875 | 4_4:-26426802 | None:intergenic |
| AGAAGGAGAGTCTAAGCAAC+AGG | 0.470064 | 4_4:-26428377 | None:intergenic |
| TTACCTCTTGTCGGCATCGG+AGG | 0.472016 | 4_4:-26426868 | None:intergenic |
| ATCTCTGGAGGTCCACAACC+TGG | 0.483993 | 4_4:+26426508 | Msa0676190:CDS |
| TCATTACCTCTTGTCGGCAT+CGG | 0.487489 | 4_4:-26426871 | None:intergenic |
| GCATGAACTCCATGTGACAC+TGG | 0.490852 | 4_4:-26426544 | None:intergenic |
| GGTCTAGTAGAATATATCTC+TGG | 0.497686 | 4_4:+26426493 | Msa0676190:CDS |
| ATGAAATTCACAATTGGAGA+TGG | 0.502014 | 4_4:+26428128 | Msa0676190:CDS |
| AATGGACCCTCTTCAAAGCC+AGG | 0.508731 | 4_4:-26427885 | None:intergenic |
| TCCTTTCAAATCTTTAGGAA+AGG | 0.509600 | 4_4:+26428214 | Msa0676190:CDS |
| AGTGGAGCTTGTTGCAGGTA+GGG | 0.513407 | 4_4:+26428055 | Msa0676190:CDS |
| AAGAAACCCTGGCTTTGAAG+AGG | 0.516304 | 4_4:+26427878 | Msa0676190:CDS |
| CAAACCATCAAGGTCAAACC+TGG | 0.519771 | 4_4:+26426598 | Msa0676190:CDS |
| TCAATAATCCAGCCAGGGAG+TGG | 0.521095 | 4_4:-26427969 | None:intergenic |
| AGGGATTCAATAATCCAGCC+AGG | 0.524844 | 4_4:-26427975 | None:intergenic |
| ATAGCTCTTTCTATCATACA+AGG | 0.527718 | 4_4:+26428300 | Msa0676190:CDS |
| GATAATTTGGTAAGAAACCC+TGG | 0.527834 | 4_4:+26427867 | Msa0676190:intron |
| GGAGTTCATGCAGTTAGACT+TGG | 0.527950 | 4_4:+26426556 | Msa0676190:CDS |
| TCAAGGTCAAACCTGGTCAA+TGG | 0.528995 | 4_4:+26426605 | Msa0676190:CDS |
| CCCTTTCCTAAAGATTTGAA+AGG | 0.532370 | 4_4:-26428215 | None:intergenic |
| AATGGTGATGTTATTGCTTG+GGG | 0.532837 | 4_4:+26426736 | Msa0676190:CDS |
| GCTATAACTTGATCAAGGAC+AGG | 0.534900 | 4_4:-26428350 | None:intergenic |
| CTTCCCAAATGGGAAATCAA+TGG | 0.542169 | 4_4:+26426472 | Msa0676190:CDS |
| GATCTTGTGTCACCACTCCC+TGG | 0.543570 | 4_4:+26427957 | Msa0676190:CDS |
| TACCTCTTGTCGGCATCGGA+GGG | 0.555604 | 4_4:-26426867 | None:intergenic |
| GTTGTGTTGAAAATAGGGAA+TGG | 0.558649 | 4_4:-26427903 | None:intergenic |
| CTCCATCTCCCAAACCATCA+AGG | 0.560309 | 4_4:+26426588 | Msa0676190:CDS |
| ATAGCAACAGCATCCAAAAG+TGG | 0.564034 | 4_4:-26426832 | None:intergenic |
| ACTGGGAAGAACATGCCTCC+AGG | 0.567603 | 4_4:-26426526 | None:intergenic |
| CTCTAATATTAGGAGCGTCT+AGG | 0.567931 | 4_4:+26426632 | Msa0676190:CDS |
| CATGAACTCCATGTGACACT+GGG | 0.571284 | 4_4:-26426543 | None:intergenic |
| GTGATGCTATAACTTGATCA+AGG | 0.574591 | 4_4:-26428355 | None:intergenic |
| ATTAGAGCATACCATTGACC+AGG | 0.578535 | 4_4:-26426616 | None:intergenic |
| TCAATGGTGATGTTATTGCT+TGG | 0.581184 | 4_4:+26426734 | Msa0676190:CDS |
| TACCCTCCGATGCCGACAAG+AGG | 0.581876 | 4_4:+26426865 | Msa0676190:CDS |
| ACATTACCTTCTGGTGACCT+GGG | 0.583918 | 4_4:-26425820 | None:intergenic |
| TGTTCTTAGAATTTGTGCAA+TGG | 0.591903 | 4_4:-26428084 | None:intergenic |
| CAGTGGAGCTTGTTGCAGGT+AGG | 0.597409 | 4_4:+26428054 | Msa0676190:CDS |
| AGGCTATAAAGTGTTTGCAA+AGG | 0.598543 | 4_4:-26426712 | None:intergenic |
| GCCATTTGGAAAAGGAGCAG+TGG | 0.599196 | 4_4:+26428037 | Msa0676190:CDS |
| CTTGATGGTTTGGGAGATGG+AGG | 0.600334 | 4_4:-26426587 | None:intergenic |
| ATGGACCCTCTTCAAAGCCA+GGG | 0.606005 | 4_4:-26427884 | None:intergenic |
| AGAAACCCTGGCTTTGAAGA+GGG | 0.606940 | 4_4:+26427879 | Msa0676190:CDS |
| TATTTGCTAATGTTCATCCC+AGG | 0.608084 | 4_4:+26425803 | Msa0676190:CDS |
| AAGCAATAACATCACCATTG+AGG | 0.621145 | 4_4:-26426732 | None:intergenic |
| ATGTTCTTCCCAGTGTCACA+TGG | 0.627696 | 4_4:+26426535 | Msa0676190:CDS |
| AAAGTTACATTCCATAACCC+TGG | 0.629174 | 4_4:+26426784 | Msa0676190:CDS |
| CTATAACTTGATCAAGGACA+GGG | 0.632443 | 4_4:-26428349 | None:intergenic |
| CTAGTAGAATATATCTCTGG+AGG | 0.635119 | 4_4:+26426496 | Msa0676190:CDS |
| TCCAAAAGTGGACCACAAGT+AGG | 0.642666 | 4_4:-26426820 | None:intergenic |
| TAGGATCTTCTTGCATACCA+GGG | 0.643241 | 4_4:-26426801 | None:intergenic |
| GATGATATTGGATCTATGTG+TGG | 0.643357 | 4_4:+26428326 | Msa0676190:CDS |
| AAAGGAACATCACCAGATTG+TGG | 0.644013 | 4_4:-26426694 | None:intergenic |
| TGGTTGTCATGGATCAATGA+TGG | 0.645175 | 4_4:+26428157 | Msa0676190:CDS |
| ATGCAAGAAGATCCTACTTG+TGG | 0.646402 | 4_4:+26426808 | Msa0676190:CDS |
| GTTCATCCCAGGTCACCAGA+AGG | 0.652959 | 4_4:+26425814 | Msa0676190:CDS |
| GGGATTCAATAATCCAGCCA+GGG | 0.660484 | 4_4:-26427974 | None:intergenic |
| TCTGGAGGTCCACAACCTGG+AGG | 0.689197 | 4_4:+26426511 | Msa0676190:CDS |
| GGAACATCACCAGATTGTGG+AGG | 0.701281 | 4_4:-26426691 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCTTTTTTTTTTTG+TGG | - | chr4_4:26427433-26427452 | None:intergenic | 10.0% |
| !! | GTTATGTACAAAAAATATAT+TGG | - | chr4_4:26426325-26426344 | None:intergenic | 15.0% |
| !!! | ATTAAGTGCTTAATTTTTAT+AGG | + | chr4_4:26427551-26427570 | Msa0676190:intron | 15.0% |
| !!! | CTTGATAATTTTTTGAAAAT+TGG | - | chr4_4:26427818-26427837 | None:intergenic | 15.0% |
| !! | CTTTGAATCAATAAATTTAA+TGG | - | chr4_4:26428006-26428025 | None:intergenic | 15.0% |
| !! | GTACAAAAAATATATTGGAA+AGG | - | chr4_4:26426320-26426339 | None:intergenic | 20.0% |
| !! | TAAGGGAAAAACAAAAAATA+GGG | - | chr4_4:26426369-26426388 | None:intergenic | 20.0% |
| !! | TTAAGGGAAAAACAAAAAAT+AGG | - | chr4_4:26426370-26426389 | None:intergenic | 20.0% |
| !!! | ATTTTGGAAGTAAACTTTAA+GGG | - | chr4_4:26426386-26426405 | None:intergenic | 20.0% |
| !! | TTAAAGTTTACTTCCAAAAT+GGG | + | chr4_4:26426386-26426405 | Msa0676190:intron | 20.0% |
| !! | CTAAATAATATTTCATGTAG+AGG | - | chr4_4:26427057-26427076 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTTTTTTTGTGG+TGG | - | chr4_4:26427430-26427449 | None:intergenic | 20.0% |
| !! | ATTTCCCTCAAAAAAAATAA+CGG | + | chr4_4:26427504-26427523 | Msa0676190:intron | 20.0% |
| !!! | AATTCCGTTATTTTTTTTGA+GGG | - | chr4_4:26427511-26427530 | None:intergenic | 20.0% |
| !!! | TAATTCCGTTATTTTTTTTG+AGG | - | chr4_4:26427512-26427531 | None:intergenic | 20.0% |
| !!! | TTAAGCACTTAATTTTCAAA+AGG | - | chr4_4:26427544-26427563 | None:intergenic | 20.0% |
| !!! | TAAATAGAGCAATTTTGAAT+TGG | - | chr4_4:26427675-26427694 | None:intergenic | 20.0% |
| !! | AATTCAAAATTGCTCTATTT+AGG | + | chr4_4:26427674-26427693 | Msa0676190:intron | 20.0% |
| !! | AATTAACCTATTTACTTTCT+TGG | + | chr4_4:26427764-26427783 | Msa0676190:intron | 20.0% |
| !! | ATTAACCTATTTACTTTCTT+GGG | + | chr4_4:26427765-26427784 | Msa0676190:intron | 20.0% |
| !!! | AATAAATTTAATGGCTTTGA+GGG | - | chr4_4:26427997-26428016 | None:intergenic | 20.0% |
| !! | TACAATATGAAATTCACAAT+TGG | + | chr4_4:26428122-26428141 | Msa0676190:CDS | 20.0% |
| ! | TACCAGTAACAAATATGAAT+TGG | - | chr4_4:26425861-26425880 | None:intergenic | 25.0% |
| ! | TTGTAAGTTTAGCAAAATCA+TGG | + | chr4_4:26426178-26426197 | Msa0676190:intron | 25.0% |
| ! | AATGTCTTGAATATTATGCT+TGG | - | chr4_4:26426292-26426311 | None:intergenic | 25.0% |
| ! | GATCAGAAATTCAGAATATA+AGG | - | chr4_4:26426347-26426366 | None:intergenic | 25.0% |
| !!! | CATTTTGGAAGTAAACTTTA+AGG | - | chr4_4:26426387-26426406 | None:intergenic | 25.0% |
| ! | CTTAAAGTTTACTTCCAAAA+TGG | + | chr4_4:26426385-26426404 | Msa0676190:intron | 25.0% |
| ! | TTGTTTCCTTTATGAATCTT+GGG | - | chr4_4:26426432-26426451 | None:intergenic | 25.0% |
| ! | TAATGTTGAATTGTTGTGAT+TGG | + | chr4_4:26426968-26426987 | Msa0676190:intron | 25.0% |
| ! | AATACTGTTGAAGATTATGA+TGG | + | chr4_4:26427153-26427172 | Msa0676190:intron | 25.0% |
| ! | ATACTGTTGAAGATTATGAT+GGG | + | chr4_4:26427154-26427173 | Msa0676190:intron | 25.0% |
| ! | AGTGATAAGTACAAAAAAAC+TGG | - | chr4_4:26427211-26427230 | None:intergenic | 25.0% |
| !!! | ACATGACCCATTTTTATATA+AGG | + | chr4_4:26427729-26427748 | Msa0676190:intron | 25.0% |
| ! | GTAGCTCCTTATATAAAAAT+GGG | - | chr4_4:26427738-26427757 | None:intergenic | 25.0% |
| ! | TGTAGCTCCTTATATAAAAA+TGG | - | chr4_4:26427739-26427758 | None:intergenic | 25.0% |
| ! | ACCAAATTATCTGCAAATAT+AGG | - | chr4_4:26427858-26427877 | None:intergenic | 25.0% |
| !!! | CATTTGTTGTGTTGAAAATA+GGG | - | chr4_4:26427911-26427930 | None:intergenic | 25.0% |
| !! | CAATAAATTTAATGGCTTTG+AGG | - | chr4_4:26427998-26428017 | None:intergenic | 25.0% |
| ! | TTCATATTGTAGACTTTGTT+TGG | - | chr4_4:26428113-26428132 | None:intergenic | 25.0% |
| ! | AAAGTTCCTTTCAAATCTTT+AGG | + | chr4_4:26428209-26428228 | Msa0676190:CDS | 25.0% |
| ! | TGCCAATTCATATTTGTTAC+TGG | + | chr4_4:26425856-26425875 | Msa0676190:intron | 30.0% |
| CAATGTAATCAGATTTGTGA+CGG | - | chr4_4:26426058-26426077 | None:intergenic | 30.0% | |
| TAAGTTTAGCAAAATCATGG+TGG | + | chr4_4:26426181-26426200 | Msa0676190:intron | 30.0% | |
| ! | AGTTTTTGCCAAAATGATAG+TGG | + | chr4_4:26426234-26426253 | Msa0676190:intron | 30.0% |
| CTTGAATATTATGCTTGGAT+TGG | - | chr4_4:26426287-26426306 | None:intergenic | 30.0% | |
| CTTGTTTCCTTTATGAATCT+TGG | - | chr4_4:26426433-26426452 | None:intergenic | 30.0% | |
| ATAAAGGAAACAAGACTCAT+TGG | + | chr4_4:26426439-26426458 | Msa0676190:CDS | 30.0% | |
| AAAACATTCACTTCCCAAAT+GGG | + | chr4_4:26426462-26426481 | Msa0676190:CDS | 30.0% | |
| CAATGGTATGCTCTAATATT+AGG | + | chr4_4:26426622-26426641 | Msa0676190:CDS | 30.0% | |
| ATGAACAATGTCCATTTATC+TGG | + | chr4_4:26426890-26426909 | Msa0676190:intron | 30.0% | |
| CGAATAGAGTGTATTAACAT+TGG | + | chr4_4:26427116-26427135 | Msa0676190:intron | 30.0% | |
| ATAAGTACAAAAAAACTGGC+GGG | - | chr4_4:26427207-26427226 | None:intergenic | 30.0% | |
| GATAAGTACAAAAAAACTGG+CGG | - | chr4_4:26427208-26427227 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTTGTGGTGGTC+GGG | - | chr4_4:26427425-26427444 | None:intergenic | 30.0% |
| !!! | CTTTTTTTTTTTGTGGTGGT+CGG | - | chr4_4:26427426-26427445 | None:intergenic | 30.0% |
| GCCTATATTTGCAGATAATT+TGG | + | chr4_4:26427854-26427873 | Msa0676190:intron | 30.0% | |
| !! | CCATTTGTTGTGTTGAAAAT+AGG | - | chr4_4:26427912-26427931 | None:intergenic | 30.0% |
| ! | CCTATTTTCAACACAACAAA+TGG | + | chr4_4:26427909-26427928 | Msa0676190:CDS | 30.0% |
| TGTTCTTAGAATTTGTGCAA+TGG | - | chr4_4:26428087-26428106 | None:intergenic | 30.0% | |
| ATGAAATTCACAATTGGAGA+TGG | + | chr4_4:26428128-26428147 | Msa0676190:CDS | 30.0% | |
| ACAATTGGAGATGGAAAAAA+TGG | + | chr4_4:26428137-26428156 | Msa0676190:CDS | 30.0% | |
| ! | TCCTTTCAAATCTTTAGGAA+AGG | + | chr4_4:26428214-26428233 | Msa0676190:CDS | 30.0% |
| ! | CCTTTCAAATCTTTAGGAAA+GGG | + | chr4_4:26428215-26428234 | Msa0676190:CDS | 30.0% |
| ATAGCTCTTTCTATCATACA+AGG | + | chr4_4:26428300-26428319 | Msa0676190:CDS | 30.0% | |
| ! | CATACAAGGATTGATGATAT+TGG | + | chr4_4:26428314-26428333 | Msa0676190:CDS | 30.0% |
| ! | TATTTGCTAATGTTCATCCC+AGG | + | chr4_4:26425803-26425822 | Msa0676190:CDS | 35.0% |
| TAGAGTTGAACATTACCTTC+TGG | - | chr4_4:26425832-26425851 | None:intergenic | 35.0% | |
| ACACTTCATATCAGACATGT+CGG | + | chr4_4:26426012-26426031 | Msa0676190:intron | 35.0% | |
| ! | ACAGTGAACCACTATCATTT+TGG | - | chr4_4:26426245-26426264 | None:intergenic | 35.0% |
| ! | GAATATTATGCTTGGATTGG+AGG | - | chr4_4:26426284-26426303 | None:intergenic | 35.0% |
| ! | TCTCTTCAAAGTTCCCATTT+TGG | - | chr4_4:26426402-26426421 | None:intergenic | 35.0% |
| TCCTTTATGAATCTTGGGTT+TGG | - | chr4_4:26426427-26426446 | None:intergenic | 35.0% | |
| GAAAACATTCACTTCCCAAA+TGG | + | chr4_4:26426461-26426480 | Msa0676190:CDS | 35.0% | |
| !! | AGACCATTGATTTCCCATTT+GGG | - | chr4_4:26426478-26426497 | None:intergenic | 35.0% |
| !! | TAGACCATTGATTTCCCATT+TGG | - | chr4_4:26426479-26426498 | None:intergenic | 35.0% |
| GGTCTAGTAGAATATATCTC+TGG | + | chr4_4:26426493-26426512 | Msa0676190:CDS | 35.0% | |
| CTAGTAGAATATATCTCTGG+AGG | + | chr4_4:26426496-26426515 | Msa0676190:CDS | 35.0% | |
| ! | AGGCTATAAAGTGTTTGCAA+AGG | - | chr4_4:26426715-26426734 | None:intergenic | 35.0% |
| CAAACACTTTATAGCCTCAA+TGG | + | chr4_4:26426718-26426737 | Msa0676190:CDS | 35.0% | |
| AAGCAATAACATCACCATTG+AGG | - | chr4_4:26426735-26426754 | None:intergenic | 35.0% | |
| ! | TCAATGGTGATGTTATTGCT+TGG | + | chr4_4:26426734-26426753 | Msa0676190:CDS | 35.0% |
| ! | CAATGGTGATGTTATTGCTT+GGG | + | chr4_4:26426735-26426754 | Msa0676190:CDS | 35.0% |
| ! | AATGGTGATGTTATTGCTTG+GGG | + | chr4_4:26426736-26426755 | Msa0676190:CDS | 35.0% |
| AAAGTTACATTCCATAACCC+TGG | + | chr4_4:26426784-26426803 | Msa0676190:CDS | 35.0% | |
| CATTGTTCATTACCTCTTGT+CGG | - | chr4_4:26426880-26426899 | None:intergenic | 35.0% | |
| !! | ACAAGCTGATTTGTTGAGAT+TGG | - | chr4_4:26426945-26426964 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGTCG+GGG | - | chr4_4:26427424-26427443 | None:intergenic | 35.0% |
| GACTTCCCAAGAAAGTAAAT+AGG | - | chr4_4:26427773-26427792 | None:intergenic | 35.0% | |
| GATAATTTGGTAAGAAACCC+TGG | + | chr4_4:26427867-26427886 | Msa0676190:intron | 35.0% | |
| GTTGTGTTGAAAATAGGGAA+TGG | - | chr4_4:26427906-26427925 | None:intergenic | 35.0% | |
| ! | AAGAATTTCCAAGTGCCATT+TGG | + | chr4_4:26428023-26428042 | Msa0676190:CDS | 35.0% |
| GATGGAAAAAATGGTTGTCA+TGG | + | chr4_4:26428146-26428165 | Msa0676190:CDS | 35.0% | |
| CCCTTTCCTAAAGATTTGAA+AGG | - | chr4_4:26428218-26428237 | None:intergenic | 35.0% | |
| GATGATATTGGATCTATGTG+TGG | + | chr4_4:26428326-26428345 | Msa0676190:CDS | 35.0% | |
| CTATAACTTGATCAAGGACA+GGG | - | chr4_4:26428352-26428371 | None:intergenic | 35.0% | |
| GTGATGCTATAACTTGATCA+AGG | - | chr4_4:26428358-26428377 | None:intergenic | 35.0% | |
| GCCAAACCCAAGATTCATAA+AGG | + | chr4_4:26426423-26426442 | Msa0676190:CDS | 40.0% | |
| CTTCCCAAATGGGAAATCAA+TGG | + | chr4_4:26426472-26426491 | Msa0676190:CDS | 40.0% | |
| ! | AGGTTTGACCTTGATGGTTT+GGG | - | chr4_4:26426599-26426618 | None:intergenic | 40.0% |
| ATTAGAGCATACCATTGACC+AGG | - | chr4_4:26426619-26426638 | None:intergenic | 40.0% | |
| !! | CTCTAATATTAGGAGCGTCT+AGG | + | chr4_4:26426632-26426651 | Msa0676190:CDS | 40.0% |
| AAAGGAACATCACCAGATTG+TGG | - | chr4_4:26426697-26426716 | None:intergenic | 40.0% | |
| TGTTATTGCTTGGGGATTCA+AGG | + | chr4_4:26426744-26426763 | Msa0676190:CDS | 40.0% | |
| TAGGATCTTCTTGCATACCA+GGG | - | chr4_4:26426804-26426823 | None:intergenic | 40.0% | |
| ATGCAAGAAGATCCTACTTG+TGG | + | chr4_4:26426808-26426827 | Msa0676190:CDS | 40.0% | |
| ATAGCAACAGCATCCAAAAG+TGG | - | chr4_4:26426835-26426854 | None:intergenic | 40.0% | |
| CTGCAGAGAATCCAGATAAA+TGG | - | chr4_4:26426904-26426923 | None:intergenic | 40.0% | |
| ATTCTCTGCAGTCATGCAAA+AGG | + | chr4_4:26426913-26426932 | Msa0676190:intron | 40.0% | |
| ! | TGAGCTTATCTCAGTTGGTA+AGG | + | chr4_4:26427385-26427404 | Msa0676190:intron | 40.0% |
| TTGCTTAACATGTGCCCTAA+GGG | + | chr4_4:26427697-26427716 | Msa0676190:intron | 40.0% | |
| !! | CATGTTAACTTGTGCCCTTA+GGG | - | chr4_4:26427714-26427733 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+AGG | - | chr4_4:26427715-26427734 | None:intergenic | 40.0% |
| !! | ACAAGATCTTGTTGCTTTGG+AGG | - | chr4_4:26427945-26427964 | None:intergenic | 40.0% |
| ! | GACACAAGATCTTGTTGCTT+TGG | - | chr4_4:26427948-26427967 | None:intergenic | 40.0% |
| !! | TTCCAAGTGCCATTTGGAAA+AGG | + | chr4_4:26428029-26428048 | Msa0676190:CDS | 40.0% |
| TGGTTGTCATGGATCAATGA+TGG | + | chr4_4:26428157-26428176 | Msa0676190:CDS | 40.0% | |
| GCTATAACTTGATCAAGGAC+AGG | - | chr4_4:26428353-26428372 | None:intergenic | 40.0% | |
| ACATTACCTTCTGGTGACCT+GGG | - | chr4_4:26425823-26425842 | None:intergenic | 45.0% | |
| AACATTACCTTCTGGTGACC+TGG | - | chr4_4:26425824-26425843 | None:intergenic | 45.0% | |
| ! | ATGAAGTGTTCGTGCTACAG+AGG | - | chr4_4:26426001-26426020 | None:intergenic | 45.0% |
| ATGTTCTTCCCAGTGTCACA+TGG | + | chr4_4:26426535-26426554 | Msa0676190:CDS | 45.0% | |
| CATGAACTCCATGTGACACT+GGG | - | chr4_4:26426546-26426565 | None:intergenic | 45.0% | |
| GGAGTTCATGCAGTTAGACT+TGG | + | chr4_4:26426556-26426575 | Msa0676190:CDS | 45.0% | |
| ! | CAGGTTTGACCTTGATGGTT+TGG | - | chr4_4:26426600-26426619 | None:intergenic | 45.0% |
| CAAACCATCAAGGTCAAACC+TGG | + | chr4_4:26426598-26426617 | Msa0676190:CDS | 45.0% | |
| TTGACCAGGTTTGACCTTGA+TGG | - | chr4_4:26426605-26426624 | None:intergenic | 45.0% | |
| TCAAGGTCAAACCTGGTCAA+TGG | + | chr4_4:26426605-26426624 | Msa0676190:CDS | 45.0% | |
| CTTCTTGCATACCAGGGTTA+TGG | - | chr4_4:26426798-26426817 | None:intergenic | 45.0% | |
| GTAGGATCTTCTTGCATACC+AGG | - | chr4_4:26426805-26426824 | None:intergenic | 45.0% | |
| ! | TCCTACTTGTGGTCCACTTT+TGG | + | chr4_4:26426819-26426838 | Msa0676190:CDS | 45.0% |
| TCCAAAAGTGGACCACAAGT+AGG | - | chr4_4:26426823-26426842 | None:intergenic | 45.0% | |
| TCATTACCTCTTGTCGGCAT+CGG | - | chr4_4:26426874-26426893 | None:intergenic | 45.0% | |
| CCAACTGAGATAAGCTCATG+AGG | - | chr4_4:26427383-26427402 | None:intergenic | 45.0% | |
| CCTCATGAGCTTATCTCAGT+TGG | + | chr4_4:26427380-26427399 | Msa0676190:intron | 45.0% | |
| GTTGCTTAACATGTGCCCTA+AGG | + | chr4_4:26427696-26427715 | Msa0676190:intron | 45.0% | |
| !! | AAGAAACCCTGGCTTTGAAG+AGG | + | chr4_4:26427878-26427897 | Msa0676190:CDS | 45.0% |
| !! | AGAAACCCTGGCTTTGAAGA+GGG | + | chr4_4:26427879-26427898 | Msa0676190:CDS | 45.0% |
| GGGATTCAATAATCCAGCCA+GGG | - | chr4_4:26427977-26427996 | None:intergenic | 45.0% | |
| AGGGATTCAATAATCCAGCC+AGG | - | chr4_4:26427978-26427997 | None:intergenic | 45.0% | |
| ! | CTCCTTTTCCAAATGGCACT+TGG | - | chr4_4:26428034-26428053 | None:intergenic | 45.0% |
| ! | TCCACTGCTCCTTTTCCAAA+TGG | - | chr4_4:26428041-26428060 | None:intergenic | 45.0% |
| AGAAGGAGAGTCTAAGCAAC+AGG | - | chr4_4:26428380-26428399 | None:intergenic | 45.0% | |
| !!! | TATTTTTTTCAAATTATTAT+TGG | + | chr4_4:26426086-26426105 | Msa0676190:intron | 5.0% |
| !! | AAAAAAATAATAAATAGTTA+AGG | + | chr4_4:26427332-26427351 | Msa0676190:intron | 5.0% |
| !! | AAAAAATAATAAATAGTTAA+GGG | + | chr4_4:26427333-26427352 | Msa0676190:intron | 5.0% |
| AGACATGTCAGTGTCGTGTC+TGG | + | chr4_4:26426112-26426131 | Msa0676190:intron | 50.0% | |
| AAGAACATGCCTCCAGGTTG+TGG | - | chr4_4:26426523-26426542 | None:intergenic | 50.0% | |
| GCATGAACTCCATGTGACAC+TGG | - | chr4_4:26426547-26426566 | None:intergenic | 50.0% | |
| ! | CTTGATGGTTTGGGAGATGG+AGG | - | chr4_4:26426590-26426609 | None:intergenic | 50.0% |
| CTCCATCTCCCAAACCATCA+AGG | + | chr4_4:26426588-26426607 | Msa0676190:CDS | 50.0% | |
| ! | GACCTTGATGGTTTGGGAGA+TGG | - | chr4_4:26426593-26426612 | None:intergenic | 50.0% |
| ATCTCAGTGCCTCCACAATC+TGG | + | chr4_4:26426682-26426701 | Msa0676190:CDS | 50.0% | |
| GGAACATCACCAGATTGTGG+AGG | - | chr4_4:26426694-26426713 | None:intergenic | 50.0% | |
| ATGGACCCTCTTCAAAGCCA+GGG | - | chr4_4:26427887-26427906 | None:intergenic | 50.0% | |
| AATGGACCCTCTTCAAAGCC+AGG | - | chr4_4:26427888-26427907 | None:intergenic | 50.0% | |
| TCAATAATCCAGCCAGGGAG+TGG | - | chr4_4:26427972-26427991 | None:intergenic | 50.0% | |
| GCCATTTGGAAAAGGAGCAG+TGG | + | chr4_4:26428037-26428056 | Msa0676190:CDS | 50.0% | |
| !! | AGTGGAGCTTGTTGCAGGTA+GGG | + | chr4_4:26428055-26428074 | Msa0676190:CDS | 50.0% |
| GTTCATCCCAGGTCACCAGA+AGG | + | chr4_4:26425814-26425833 | Msa0676190:CDS | 55.0% | |
| ! | ATCTCTGGAGGTCCACAACC+TGG | + | chr4_4:26426508-26426527 | Msa0676190:CDS | 55.0% |
| ACTGGGAAGAACATGCCTCC+AGG | - | chr4_4:26426529-26426548 | None:intergenic | 55.0% | |
| ! | TACCTCTTGTCGGCATCGGA+GGG | - | chr4_4:26426870-26426889 | None:intergenic | 55.0% |
| ! | TTACCTCTTGTCGGCATCGG+AGG | - | chr4_4:26426871-26426890 | None:intergenic | 55.0% |
| GATCTTGTGTCACCACTCCC+TGG | + | chr4_4:26427957-26427976 | Msa0676190:CDS | 55.0% | |
| !! | CAGTGGAGCTTGTTGCAGGT+AGG | + | chr4_4:26428054-26428073 | Msa0676190:CDS | 55.0% |
| TCTGGAGGTCCACAACCTGG+AGG | + | chr4_4:26426511-26426530 | Msa0676190:CDS | 60.0% | |
| TACCCTCCGATGCCGACAAG+AGG | + | chr4_4:26426865-26426884 | Msa0676190:CDS | 60.0% | |
| TTGTGTCACCACTCCCTGGC+TGG | + | chr4_4:26427961-26427980 | Msa0676190:CDS | 60.0% | |
| !! | GGAGCAGTGGAGCTTGTTGC+AGG | + | chr4_4:26428050-26428069 | Msa0676190:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 26425748 | 26428399 | 26425748 | ID=Msa0676190;Name=Msa0676190 |
| chr4_4 | mRNA | 26425748 | 26428399 | 26425748 | ID=Msa0676190-mRNA-1;Parent=Msa0676190;Name=Msa0676190-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.5|0.33|1|1|1|3|11|367 |
| chr4_4 | exon | 26425748 | 26425835 | 26425748 | ID=Msa0676190-mRNA-1:exon:7053;Parent=Msa0676190-mRNA-1 |
| chr4_4 | exon | 26426392 | 26426886 | 26426392 | ID=Msa0676190-mRNA-1:exon:7054;Parent=Msa0676190-mRNA-1 |
| chr4_4 | exon | 26427868 | 26428399 | 26427868 | ID=Msa0676190-mRNA-1:exon:7055;Parent=Msa0676190-mRNA-1 |
| chr4_4 | CDS | 26425748 | 26425835 | 26425748 | ID=Msa0676190-mRNA-1:cds;Parent=Msa0676190-mRNA-1 |
| chr4_4 | CDS | 26426392 | 26426886 | 26426392 | ID=Msa0676190-mRNA-1:cds;Parent=Msa0676190-mRNA-1 |
| chr4_4 | CDS | 26427868 | 26428388 | 26427868 | ID=Msa0676190-mRNA-1:cds;Parent=Msa0676190-mRNA-1 |
| chr4_4 | three_prime_UTR | 26428389 | 26428399 | 26428389 | ID=Msa0676190-mRNA-1:three_prime_utr;Parent=Msa0676190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
