AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0967820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0967820 MtrunA17_Chr1g0213061 96.061 330 12 1 1 329 1 330 0.0 653
Msa0967820 MtrunA17_Chr7g0224371 63.303 327 111 5 1 322 1 323 1.71e-141 402
Msa0967820 MtrunA17_Chr7g0244461 60.383 313 119 4 10 321 4 312 4.28e-136 389
Msa0967820 MtrunA17_Chr7g0244451 60.870 322 119 5 1 321 1 316 2.25e-134 384
Msa0967820 MtrunA17_Chr4g0013201 58.900 309 123 3 14 321 33 338 1.22e-128 370
Msa0967820 MtrunA17_Chr4g0013191 61.921 302 108 5 24 321 42 340 8.08e-128 369
Msa0967820 MtrunA17_Chr2g0320071 57.006 314 131 3 9 321 7 317 2.19e-124 359
Msa0967820 MtrunA17_Chr2g0320101 55.312 320 139 3 3 321 1 317 1.34e-123 357
Msa0967820 MtrunA17_Chr3g0129051 57.188 313 127 5 9 318 11 319 2.41e-123 357
Msa0967820 MtrunA17_Chr2g0320061 55.000 320 141 2 3 321 1 318 2.53e-122 354
Msa0967820 MtrunA17_Chr3g0106901 58.385 322 130 3 1 321 5 323 2.07e-120 349
Msa0967820 MtrunA17_Chr2g0320051 54.375 320 143 2 3 321 1 318 8.52e-120 347
Msa0967820 MtrunA17_Chr3g0114451 54.140 314 140 3 9 321 8 318 1.49e-119 347
Msa0967820 MtrunA17_Chr3g0129061 58.387 310 122 5 12 318 14 319 5.30e-119 345
Msa0967820 MtrunA17_Chr2g0320091 54.206 321 142 4 3 321 1 318 3.15e-116 338
Msa0967820 MtrunA17_Chr3g0106921 53.628 317 139 5 9 321 8 320 7.56e-116 337
Msa0967820 MtrunA17_Chr3g0129041 57.143 315 129 4 10 321 11 322 1.56e-115 337
Msa0967820 MtrunA17_Chr2g0320031 52.648 321 148 3 3 321 1 319 6.27e-115 335
Msa0967820 MtrunA17_Chr5g0432441 52.280 329 146 5 1 321 1 326 7.26e-114 333
Msa0967820 MtrunA17_Chr5g0438021 54.747 316 134 6 9 321 16 325 4.20e-113 331
Msa0967820 MtrunA17_Chr5g0432351 53.459 318 140 6 9 321 7 321 3.67e-112 328
Msa0967820 MtrunA17_Chr5g0432341 53.459 318 140 6 9 321 7 321 1.20e-111 327
Msa0967820 MtrunA17_Chr4g0013171 50.949 316 149 4 9 321 9 321 5.58e-110 323
Msa0967820 MtrunA17_Chr5g0432331 51.572 318 144 6 9 321 40 352 6.65e-108 318
Msa0967820 MtrunA17_Chr3g0107881 49.080 326 159 5 1 321 1 324 1.33e-107 317
Msa0967820 MtrunA17_Chr4g0038151 51.534 326 148 6 1 321 1 321 6.03e-107 315
Msa0967820 MtrunA17_Chr4g0013181 52.881 295 133 4 30 321 62 353 1.75e-105 312
Msa0967820 MtrunA17_Chr4g0038161 51.227 326 148 6 1 321 1 320 3.32e-105 310
Msa0967820 MtrunA17_Chr4g0038171 50.613 326 151 5 1 321 1 321 3.67e-105 310
Msa0967820 MtrunA17_Chr4g0043391 50.307 326 152 5 1 321 4 324 4.23e-105 310
Msa0967820 MtrunA17_Chr5g0402581 45.897 329 167 4 1 321 1 326 6.64e-97 290
Msa0967820 MtrunA17_Chr5g0402571 44.681 329 171 4 1 321 1 326 6.61e-95 284
Msa0967820 MtrunA17_Chr7g0258811 44.308 325 168 6 9 322 50 372 4.38e-93 281
Msa0967820 MtrunA17_Chr5g0404721 47.195 303 150 3 27 321 30 330 6.53e-93 280
Msa0967820 MtrunA17_Chr1g0175561 46.296 324 157 7 9 322 11 327 7.96e-93 279
Msa0967820 MtrunA17_Chr8g0372601 45.687 313 160 3 17 321 20 330 2.43e-92 278
Msa0967820 MtrunA17_Chr2g0292211 46.624 311 155 5 23 324 36 344 6.13e-91 276
Msa0967820 MtrunA17_Chr2g0292181 45.981 311 157 4 23 324 34 342 1.10e-89 272
Msa0967820 MtrunA17_Chr2g0292151 45.659 311 158 4 23 324 25 333 1.86e-89 271
Msa0967820 MtrunA17_Chr2g0291751 45.253 316 162 4 18 324 20 333 3.59e-89 271
Msa0967820 MtrunA17_Chr5g0400331 47.302 315 149 5 21 321 20 331 7.93e-89 269
Msa0967820 MtrunA17_Chr1g0155611 46.711 304 151 4 27 321 46 347 1.44e-88 269
Msa0967820 MtrunA17_Chr4g0070951 42.769 325 171 5 9 322 10 330 1.54e-88 268
Msa0967820 MtrunA17_Chr2g0292111 45.338 311 159 4 23 324 25 333 2.47e-88 269
Msa0967820 MtrunA17_Chr2g0292251 44.984 309 159 4 25 324 26 332 5.15e-87 265
Msa0967820 MtrunA17_Chr2g0292091 43.168 322 171 5 13 324 9 328 5.91e-87 265
Msa0967820 MtrunA17_Chr2g0292241 43.077 325 171 5 12 324 11 333 2.32e-86 263
Msa0967820 MtrunA17_Chr2g0299691 44.411 331 166 7 5 322 34 359 8.01e-86 262
Msa0967820 MtrunA17_Chr2g0292261 43.243 333 178 5 5 328 7 337 1.86e-84 259
Msa0967820 MtrunA17_Chr4g0068621 45.098 306 160 3 22 321 33 336 1.98e-84 258
Msa0967820 MtrunA17_Chr2g0292101 43.750 320 168 6 15 324 12 329 6.35e-84 257
Msa0967820 MtrunA17_Chr2g0292271 44.051 311 163 4 23 324 25 333 1.33e-83 256
Msa0967820 MtrunA17_Chr5g0432401 43.533 317 130 7 9 320 13 285 9.06e-83 252
Msa0967820 MtrunA17_Chr6g0477071 41.587 315 174 7 9 321 36 342 3.75e-82 252
Msa0967820 MtrunA17_Chr1g0188431 41.104 326 177 7 1 321 12 327 4.74e-82 251
Msa0967820 MtrunA17_Chr3g0128061 41.796 323 176 5 9 322 8 327 1.60e-80 248
Msa0967820 MtrunA17_Chr2g0279041 41.566 332 176 6 1 321 1 325 4.72e-79 244
Msa0967820 MtrunA17_Chr4g0013721 42.857 308 162 5 22 321 95 396 6.65e-79 246
Msa0967820 MtrunA17_Chr5g0421411 44.718 284 143 7 50 321 4 285 2.00e-78 241
Msa0967820 MtrunA17_Chr2g0292291 43.590 312 164 6 23 324 26 335 7.43e-78 242
Msa0967820 MtrunA17_Chr2g0322861 40.810 321 177 6 10 321 70 386 1.68e-77 242
Msa0967820 MtrunA17_Chr4g0013821 41.558 308 166 5 23 322 24 325 5.29e-77 239
Msa0967820 MtrunA17_Chr4g0024121 40.248 323 178 7 10 321 8 326 1.79e-76 237
Msa0967820 MtrunA17_Chr1g0204011 41.463 328 179 6 1 321 1 322 4.39e-76 236
Msa0967820 MtrunA17_Chr1g0157051 38.838 327 181 8 3 320 1 317 1.07e-74 233
Msa0967820 MtrunA17_Chr1g0164891 42.904 303 158 7 31 321 93 392 1.47e-74 234
Msa0967820 MtrunA17_Chr7g0254201 42.053 302 163 6 25 321 18 312 7.28e-74 230
Msa0967820 MtrunA17_Chr1g0194151 39.692 325 179 7 10 321 13 333 8.63e-74 231
Msa0967820 MtrunA17_Chr7g0268501 40.557 323 175 7 9 321 5 320 2.36e-73 229
Msa0967820 MtrunA17_Chr7g0268521 40.557 323 175 7 9 321 5 320 2.36e-73 229
Msa0967820 MtrunA17_Chr1g0194271 39.577 331 178 6 10 321 13 340 8.95e-73 228
Msa0967820 MtrunA17_Chr5g0405991 40.498 321 171 8 10 321 7 316 3.88e-72 226
Msa0967820 MtrunA17_Chr6g0460711 40.252 318 179 7 11 323 5 316 1.50e-71 224
Msa0967820 MtrunA17_Chr8g0371381 39.871 311 166 7 21 321 20 319 6.94e-70 220
Msa0967820 MtrunA17_Chr4g0063671 40.184 326 172 8 8 321 6 320 3.31e-69 218
Msa0967820 MtrunA17_Chr2g0296621 40.132 304 163 7 27 322 50 342 7.66e-69 218
Msa0967820 MtrunA17_Chr7g0254231 39.130 299 175 6 25 322 20 312 1.52e-68 216
Msa0967820 MtrunA17_Chr2g0316481 39.458 332 159 8 25 317 74 402 8.99e-66 212
Msa0967820 MtrunA17_Chr1g0197411 38.199 322 187 6 10 321 11 330 9.78e-65 207
Msa0967820 MtrunA17_Chr2g0316191 38.855 332 162 8 25 317 74 403 2.31e-64 209
Msa0967820 MtrunA17_Chr2g0316831 37.462 331 167 6 25 317 110 438 7.22e-64 208
Msa0967820 MtrunA17_Chr2g0279061 43.893 262 129 6 71 321 12 266 1.25e-63 202
Msa0967820 MtrunA17_Chr3g0114461 53.226 186 84 2 137 321 9 192 2.00e-63 199
Msa0967820 MtrunA17_Chr2g0316791 38.671 331 163 8 25 317 74 402 5.00e-63 205
Msa0967820 MtrunA17_Chr6g0451571 39.938 323 179 9 9 321 17 334 1.12e-62 202
Msa0967820 MtrunA17_Chr6g0467251 35.736 333 197 6 3 325 4 329 2.94e-62 201
Msa0967820 MtrunA17_Chr7g0225221 36.615 325 195 7 3 321 1 320 4.75e-62 200
Msa0967820 MtrunA17_Chr4g0053871 39.571 326 182 8 1 317 1 320 1.04e-60 197
Msa0967820 MtrunA17_Chr4g0076211 39.073 302 166 7 28 321 42 333 4.70e-60 195
Msa0967820 MtrunA17_Chr8g0364291 36.728 324 193 6 7 321 4 324 4.94e-60 195
Msa0967820 MtrunA17_Chr6g0467161 39.057 297 174 6 27 321 45 336 6.12e-60 195
Msa0967820 MtrunA17_Chr2g0311251 38.757 338 158 11 25 320 9 339 9.21e-60 195
Msa0967820 MtrunA17_Chr5g0413051 37.419 310 178 7 25 321 71 377 2.81e-59 194
Msa0967820 MtrunA17_Chr1g0181511 34.539 304 189 6 25 322 25 324 6.39e-59 192
Msa0967820 MtrunA17_Chr2g0311241 35.657 373 156 11 25 317 58 426 7.09e-59 195
Msa0967820 MtrunA17_Chr5g0401431 37.538 325 181 9 11 320 11 328 6.81e-58 189
Msa0967820 MtrunA17_Chr1g0181431 34.437 302 192 5 25 322 25 324 2.13e-57 188
Msa0967820 MtrunA17_Chr2g0278671 36.570 309 181 6 23 321 20 323 3.75e-57 187
Msa0967820 MtrunA17_Chr1g0148021 37.764 331 185 10 3 321 7 328 7.83e-57 187
Msa0967820 MtrunA17_Chr4g0046131 36.280 328 187 9 9 317 18 342 1.11e-56 187
Msa0967820 MtrunA17_Chr4g0075241 34.211 304 188 5 26 321 28 327 1.15e-54 181
Msa0967820 MtrunA17_Chr2g0329641 34.641 306 185 6 26 321 35 335 1.23e-53 179
Msa0967820 MtrunA17_Chr6g0467121 34.627 335 195 9 4 322 38 364 1.64e-53 180
Msa0967820 MtrunA17_Chr1g0181481 34.323 303 191 6 25 322 25 324 3.63e-53 177
Msa0967820 MtrunA17_Chr3g0136751 35.152 330 195 7 3 321 1 322 4.21e-52 174
Msa0967820 MtrunA17_Chr4g0072091 36.842 304 173 8 26 317 23 319 1.04e-51 173
Msa0967820 MtrunA17_Chr4g0074851 34.835 333 198 9 3 321 1 328 3.46e-51 172
Msa0967820 MtrunA17_Chr3g0114491 60.714 112 44 0 26 137 17 128 1.64e-44 149
Msa0967820 MtrunA17_Chr2g0316811 35.889 287 128 8 25 257 48 332 4.23e-44 154
Msa0967820 MtrunA17_Chr2g0292281 40.930 215 106 5 119 324 17 219 3.81e-39 138
Msa0967820 MtrunA17_Chr2g0316141 37.218 266 144 10 73 317 11 274 2.92e-37 134
Msa0967820 MtrunA17_Chr2g0316181 37.218 266 144 10 73 317 11 274 2.92e-37 134
Msa0967820 MtrunA17_Chr4g0004591 30.284 317 154 6 27 317 77 352 3.16e-37 136
Msa0967820 MtrunA17_Chr5g0432321 50.420 119 55 2 148 265 17 132 6.33e-33 119
Msa0967820 MtrunA17_Chr1g0181491 38.462 117 70 2 19 135 4 118 2.72e-22 91.3
Msa0967820 MtrunA17_Chr3g0104101 36.111 144 79 6 190 322 9 150 3.62e-22 90.9
Msa0967820 MtrunA17_Chr6g0468731 60.870 69 23 2 66 134 22 86 2.86e-21 86.7
Msa0967820 MtrunA17_Chr2g0316771 32.065 184 86 6 176 322 7 188 9.14e-20 85.5
Msa0967820 MtrunA17_Chr1g0181501 30.052 193 125 6 136 322 2 190 2.69e-19 84.3
Msa0967820 MtrunA17_Chr7g0254181 45.745 94 49 2 99 192 31 122 2.40e-17 78.2
Msa0967820 MtrunA17_Chr1g0196191 52.055 73 34 1 65 137 23 94 2.76e-17 77.8
Msa0967820 MtrunA17_Chr5g0432361 40.217 92 51 2 230 320 20 108 9.14e-17 75.1
Msa0967820 MtrunA17_Chr3g0137751 34.507 142 80 4 59 196 106 238 3.21e-13 69.3
Msa0967820 MtrunA17_Chr4g0013811 39.744 78 46 1 134 210 2 79 2.19e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0967820 AT5G05340.1 56.000 300 126 4 25 321 28 324 1.08e-114 335
Msa0967820 AT5G58400.1 51.242 322 150 4 4 321 7 325 1.43e-108 320
Msa0967820 AT1G14550.1 48.418 316 157 4 10 321 8 321 1.11e-102 304
Msa0967820 AT5G58390.1 50.160 313 153 2 11 321 5 316 1.29e-100 299
Msa0967820 AT5G06730.1 45.994 337 169 6 4 329 8 342 8.78e-97 291
Msa0967820 AT4G36430.1 44.268 314 165 3 17 322 20 331 6.84e-96 287
Msa0967820 AT5G06720.1 46.061 330 165 6 3 321 6 333 2.36e-95 286
Msa0967820 AT1G14540.1 46.057 317 163 4 7 321 5 315 4.37e-95 285
Msa0967820 AT2G18150.1 46.488 299 150 3 31 321 40 336 6.05e-95 285
Msa0967820 AT2G18140.1 44.144 333 165 5 8 321 5 335 7.96e-93 280
Msa0967820 AT1G44970.1 47.436 312 153 4 19 321 37 346 3.38e-92 278
Msa0967820 AT5G19890.1 45.538 325 159 6 8 321 10 327 1.31e-91 276
Msa0967820 AT4G08770.1 46.326 313 155 5 23 324 20 330 2.46e-89 271
Msa0967820 AT5G66390.1 44.728 313 163 3 17 321 23 333 1.70e-88 269
Msa0967820 AT2G38380.1 45.794 321 160 6 13 321 15 333 2.69e-88 269
Msa0967820 AT3G50990.1 43.976 332 173 5 1 321 12 341 3.59e-88 268
Msa0967820 AT2G38390.1 44.860 321 163 6 13 321 15 333 6.06e-88 268
Msa0967820 AT3G32980.1 43.452 336 175 7 2 324 4 337 3.20e-87 266
Msa0967820 AT4G08780.1 44.409 313 161 5 23 324 20 330 2.10e-85 261
Msa0967820 AT2G35380.1 45.092 326 164 4 9 321 12 335 2.93e-85 260
Msa0967820 AT3G49120.1 43.119 327 171 7 11 324 14 338 1.85e-84 259
Msa0967820 AT1G49570.1 45.016 311 157 6 20 319 41 348 3.00e-84 258
Msa0967820 AT3G49110.1 43.119 327 171 7 11 324 15 339 1.54e-83 257
Msa0967820 AT4G16270.1 46.205 303 151 4 27 321 50 348 9.58e-82 252
Msa0967820 AT1G68850.1 41.558 308 165 6 27 321 30 335 1.05e-80 249
Msa0967820 AT2G22420.1 41.693 319 172 6 11 321 7 319 1.40e-80 248
Msa0967820 AT5G19880.1 42.433 337 170 8 1 321 1 329 8.38e-79 244
Msa0967820 AT4G33420.1 40.575 313 177 6 11 321 20 325 2.79e-77 239
Msa0967820 AT4G33420.2 40.575 313 177 6 11 321 67 372 1.28e-76 239
Msa0967820 AT3G03670.1 41.433 321 174 6 10 321 6 321 1.10e-75 235
Msa0967820 AT3G01190.1 42.415 323 159 8 13 321 12 321 1.00e-74 233
Msa0967820 AT5G15180.1 39.222 334 175 7 5 321 7 329 1.17e-74 233
Msa0967820 AT5G51890.1 39.339 333 179 10 1 321 1 322 2.01e-72 227
Msa0967820 AT2G41480.1 38.650 326 180 8 9 321 10 328 1.45e-71 225
Msa0967820 AT4G11290.1 40.373 322 177 8 12 321 8 326 3.30e-71 224
Msa0967820 AT1G05260.1 38.973 331 184 7 1 322 5 326 5.37e-71 224
Msa0967820 AT5G42180.1 38.679 318 178 7 11 320 8 316 5.20e-70 221
Msa0967820 AT5G64120.1 41.414 297 161 5 31 321 39 328 5.80e-70 221
Msa0967820 AT5G40150.1 40.864 301 172 5 25 321 30 328 1.24e-68 218
Msa0967820 AT3G28200.1 41.333 300 171 5 25 321 19 316 1.47e-68 217
Msa0967820 AT1G05240.1 38.907 311 163 8 27 321 26 325 2.97e-68 216
Msa0967820 AT1G05250.1 38.907 311 163 8 27 321 26 325 2.97e-68 216
Msa0967820 AT3G21770.1 39.550 311 173 7 18 317 18 324 6.94e-68 216
Msa0967820 AT4G26010.1 37.188 320 189 8 3 321 1 309 2.87e-67 213
Msa0967820 AT4G26010.2 37.188 320 189 8 3 321 29 337 6.81e-67 213
Msa0967820 AT1G71695.1 41.830 306 163 8 27 324 44 342 2.92e-66 213
Msa0967820 AT5G17820.1 38.871 319 176 7 10 321 7 313 3.86e-66 211
Msa0967820 AT5G17820.2 38.871 319 176 7 10 321 60 366 3.02e-65 210
Msa0967820 AT4G33870.1 35.072 345 155 6 27 317 68 397 6.55e-65 210
Msa0967820 AT5G39580.1 38.580 324 183 8 6 321 4 319 1.09e-63 204
Msa0967820 AT1G77100.1 39.498 319 181 9 9 321 7 319 2.91e-63 203
Msa0967820 AT2G39040.1 40.968 310 167 8 25 321 44 350 1.01e-62 203
Msa0967820 AT5G14130.1 37.578 322 186 7 9 321 15 330 1.01e-62 202
Msa0967820 AT5G14130.2 37.578 322 186 7 9 321 56 371 2.58e-62 202
Msa0967820 AT4G25980.1 36.228 334 192 9 1 321 1 326 6.33e-62 200
Msa0967820 AT2G35380.2 46.341 246 117 4 89 321 4 247 9.40e-62 197
Msa0967820 AT1G34510.1 37.742 310 184 7 13 321 8 309 4.57e-61 197
Msa0967820 AT1G30870.1 37.255 306 172 6 27 322 51 346 6.64e-61 198
Msa0967820 AT5G64100.1 38.284 303 167 7 29 321 39 331 4.74e-60 196
Msa0967820 AT1G24110.1 37.771 323 183 8 9 321 8 322 2.40e-59 194
Msa0967820 AT5G64110.1 38.226 327 176 8 9 321 16 330 3.58e-59 193
Msa0967820 AT2G18980.1 38.462 325 180 9 9 321 7 323 6.53e-59 192
Msa0967820 AT5G67400.1 36.503 326 186 8 9 317 4 325 4.33e-57 188
Msa0967820 AT2G24800.1 37.864 309 172 7 25 321 29 329 4.28e-56 185
Msa0967820 AT2G34060.1 37.209 344 182 12 1 317 6 342 8.31e-56 185
Msa0967820 AT3G49960.1 38.889 324 170 12 12 317 12 325 8.48e-56 184
Msa0967820 AT4G31760.1 37.461 323 179 9 11 321 15 326 8.90e-56 184
Msa0967820 AT4G30170.1 37.299 311 175 8 23 321 23 325 2.78e-55 183
Msa0967820 AT4G37530.1 36.334 311 174 9 23 317 23 325 3.00e-55 183
Msa0967820 AT5G47000.1 36.697 327 192 9 7 321 8 331 1.34e-54 181
Msa0967820 AT4G37520.1 37.742 310 167 10 25 317 25 325 2.05e-54 181
Msa0967820 AT2G37130.1 35.738 305 185 7 24 321 27 327 4.58e-54 180
Msa0967820 AT2G43480.1 35.065 308 182 7 26 321 34 335 1.14e-53 179
Msa0967820 AT2G37130.2 35.786 299 181 7 30 321 2 296 4.18e-53 176
Msa0967820 AT4G37520.2 38.065 310 163 12 25 317 25 322 1.06e-52 176
Msa0967820 AT3G17070.1 36.152 343 187 11 1 321 7 339 1.62e-52 176
Msa0967820 AT5G24070.1 35.238 315 186 8 20 322 28 336 2.52e-52 176
Msa0967820 AT4G21960.1 33.742 326 198 7 10 321 6 327 7.47e-52 174
Msa0967820 AT4G17690.1 37.000 300 178 8 27 319 26 321 7.42e-51 172
Msa0967820 AT4G37530.2 38.403 263 139 8 23 269 23 278 9.30e-51 170
Msa0967820 AT5G22410.1 32.500 320 199 8 9 318 10 322 8.10e-49 166
Msa0967820 AT4G25980.2 40.415 193 111 3 1 193 46 234 3.56e-42 148
Msa0967820 AT5G39580.2 40.191 209 115 5 6 213 4 203 3.59e-40 141
Msa0967820 AT2G24800.2 40.933 193 101 5 25 214 29 211 2.41e-36 131
Msa0967820 AT3G17070.2 34.815 270 148 9 69 321 18 276 1.03e-35 130
Msa0967820 AT3G42570.1 35.374 147 81 4 50 193 14 149 3.46e-16 75.1
Msa0967820 AT4G32320.1 26.821 302 141 12 14 300 83 319 1.03e-12 68.6

Find 57 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGCTTTAAGTTCTGTTAA+AGG 0.213559 6_3:-97894114 Msa0967820:CDS
CTAATTGTACGAACAGCTTT+TGG 0.248258 6_3:+97894006 None:intergenic
GAAGAAATGGTTACTTTATC+AGG 0.253613 6_3:-97893238 Msa0967820:intron
CACTCTGATCAACAACTATT+TGG 0.263540 6_3:-97892353 Msa0967820:CDS
TTCGGCTGTGAAACCTTTCT+TGG 0.264682 6_3:+97893258 None:intergenic
AAGGCCATCAAGATTCAAAA+AGG 0.295453 6_3:+97893294 None:intergenic
TACAATTAGGAAAGCAGTTC+AGG 0.312689 6_3:-97893992 Msa0967820:CDS
TCTTGGCGAAAGCAGTAATA+AGG 0.313799 6_3:+97893275 None:intergenic
CAAAAGCTGTTCGTACAATT+AGG 0.330721 6_3:-97894005 Msa0967820:CDS
CCTCTCAGCGAATTTGCGTT+TGG 0.333568 6_3:+97893617 None:intergenic
CTCTCAGCGAATTTGCGTTT+GGG 0.337491 6_3:+97893618 None:intergenic
GAGTTATCAGCTAATTTCTA+TGG 0.342682 6_3:-97894039 Msa0967820:CDS
CTATTAATTACATGTATGAT+TGG 0.345529 6_3:-97894078 Msa0967820:CDS
TGATCAGGTGCTCACACAAT+AGG 0.350317 6_3:-97892575 Msa0967820:intron
TCTTCTTACTTGAGCGTTTG+TGG 0.357638 6_3:+97892319 None:intergenic
CCAAAACTTGTTGAAAAGTA+AGG 0.368077 6_3:-97892384 Msa0967820:CDS
CAAAGATGGAATGTACTATT+AGG 0.369687 6_3:-97893370 Msa0967820:CDS
TAAGCAGTGGTAGTGTTTGA+TGG 0.370648 6_3:+97892173 None:intergenic
TCAATGCTTAGTCCACTTAC+TGG 0.377441 6_3:-97892239 Msa0967820:CDS
TGATAAAGTAACCATTTCTT+CGG 0.412644 6_3:+97893240 None:intergenic
ACATCTTAGCCCTTGCTGCT+AGG 0.420580 6_3:-97893526 Msa0967820:CDS
AGATGACATCAAATCTCAAT+TGG 0.429687 6_3:-97893582 Msa0967820:CDS
AGGTTTCACAGCCGAAGAAA+TGG 0.443774 6_3:-97893251 Msa0967820:CDS
ATTACTGCTTTCGCCAAGAA+AGG 0.453887 6_3:-97893271 Msa0967820:CDS
AGTCCACTTACTGGCATTGA+AGG 0.460678 6_3:-97892230 Msa0967820:CDS
TCACCTTCAATGCCAGTAAG+TGG 0.469881 6_3:+97892227 None:intergenic
CATCTTAGCCCTTGCTGCTA+GGG 0.473688 6_3:-97893525 Msa0967820:CDS
TCAGAACAAGAGACAGTATT+GGG 0.477115 6_3:+97893548 None:intergenic
GAACAAAGCAGTCATGGAAA+TGG 0.478577 6_3:+97893923 None:intergenic
CTGGCATTGAAGGTGAAATC+AGG 0.481698 6_3:-97892220 Msa0967820:CDS
GATCAACAACTATTTGGTAA+TGG 0.497432 6_3:-97892347 Msa0967820:CDS
AGAAGATATAGCAGAAGCAT+GGG 0.506186 6_3:-97892302 Msa0967820:CDS
TTGATGGAGCATTGACGAAA+TGG 0.506430 6_3:+97892189 None:intergenic
TATTAATTACATGTATGATT+GGG 0.510374 6_3:-97894077 Msa0967820:CDS
TTACTTGAACAAAGCAGTCA+TGG 0.513127 6_3:+97893917 None:intergenic
AAGAAGATATAGCAGAAGCA+TGG 0.514686 6_3:-97892303 Msa0967820:CDS
TATAGCTTGGTGGACAAAGA+TGG 0.515315 6_3:-97893384 Msa0967820:intron
GATCAGGTGCTCACACAATA+GGG 0.525526 6_3:-97892574 Msa0967820:intron
GACGACACATCAAATTTCAC+AGG 0.527948 6_3:-97893656 Msa0967820:CDS
CGTGGTGTCGAGGAGTCAAA+AGG 0.540660 6_3:+97892434 None:intergenic
CAAAACTTGTTGAAAAGTAA+GGG 0.557870 6_3:-97892383 Msa0967820:CDS
GTCAGAACAAGAGACAGTAT+TGG 0.568320 6_3:+97893547 None:intergenic
TTAGCCCTTGCTGCTAGGGA+CGG 0.572382 6_3:-97893521 Msa0967820:CDS
CAACACCGTCCCTAGCAGCA+AGG 0.580793 6_3:+97893516 None:intergenic
ATGATGTATATATAGCTTGG+TGG 0.584991 6_3:-97893394 Msa0967820:intron
AACACCGTCCCTAGCAGCAA+GGG 0.585075 6_3:+97893517 None:intergenic
ATCATGAGGACGTGGTGTCG+AGG 0.586699 6_3:+97892424 None:intergenic
TGACATCAAATCTCAATTGG+AGG 0.589015 6_3:-97893579 Msa0967820:CDS
GATTAATTTAATTTAAGCAG+TGG 0.594474 6_3:+97892160 None:intergenic
CCAAACGCAAATTCGCTGAG+AGG 0.600916 6_3:-97893617 Msa0967820:CDS
TGCTAGGGACGGTGTTGCTG+AGG 0.615933 6_3:-97893510 Msa0967820:intron
TGTTAAGAATGAGAGTCGCA+TGG 0.618020 6_3:-97893965 Msa0967820:CDS
CTCACACAATAGGGCTAGTG+AGG 0.619880 6_3:-97892565 Msa0967820:CDS
ATGGAAATGGAGTCTAAGCA+AGG 0.625587 6_3:+97893936 None:intergenic
GTTAAGAATGAGAGTCGCAT+GGG 0.627549 6_3:-97893964 Msa0967820:CDS
TTATCAAAATCATGAGGACG+TGG 0.652723 6_3:+97892416 None:intergenic
TAACCATTATCAAAATCATG+AGG 0.665603 6_3:+97892410 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAATTACATGTATGATT+GGG - chr6_3:97892209-97892228 Msa0967820:CDS 15.0%
!! CATCAAATTACATTAATTAT+CGG - chr6_3:97893093-97893112 Msa0967820:intron 15.0%
!!! ATATACTATTAATGACATTT+TGG + chr6_3:97893671-97893690 None:intergenic 15.0%
!!! AATAGTATATAACATTTTGA+TGG - chr6_3:97893681-97893700 Msa0967820:CDS 15.0%
!! TATTAATTACATGTATGATT+GGG - chr6_3:97892209-97892228 Msa0967820:CDS 15.0%
!! CATCAAATTACATTAATTAT+CGG - chr6_3:97893093-97893112 Msa0967820:intron 15.0%
!!! ATATACTATTAATGACATTT+TGG + chr6_3:97893671-97893690 None:intergenic 15.0%
!!! AATAGTATATAACATTTTGA+TGG - chr6_3:97893681-97893700 Msa0967820:CDS 15.0%
!! CTATTAATTACATGTATGAT+TGG - chr6_3:97892208-97892227 Msa0967820:CDS 20.0%
!! TAAATGATGTATATATAGCT+TGG - chr6_3:97892889-97892908 Msa0967820:intron 20.0%
!! CGATAATTAATGTAATTTGA+TGG + chr6_3:97893095-97893114 None:intergenic 20.0%
!! TATCAATTAATATTGAACGA+AGG - chr6_3:97893341-97893360 Msa0967820:CDS 20.0%
!! ATCAATTAATATTGAACGAA+GGG - chr6_3:97893342-97893361 Msa0967820:CDS 20.0%
!! GTTGTTTGATTAAGATAAAA+TGG + chr6_3:97893489-97893508 None:intergenic 20.0%
!! CTATTAATTACATGTATGAT+TGG - chr6_3:97892208-97892227 Msa0967820:CDS 20.0%
!! TAAATGATGTATATATAGCT+TGG - chr6_3:97892889-97892908 Msa0967820:intron 20.0%
!! CGATAATTAATGTAATTTGA+TGG + chr6_3:97893095-97893114 None:intergenic 20.0%
!! TATCAATTAATATTGAACGA+AGG - chr6_3:97893341-97893360 Msa0967820:CDS 20.0%
!! ATCAATTAATATTGAACGAA+GGG - chr6_3:97893342-97893361 Msa0967820:CDS 20.0%
!! GTTGTTTGATTAAGATAAAA+TGG + chr6_3:97893489-97893508 None:intergenic 20.0%
! TGATAAAGTAACCATTTCTT+CGG + chr6_3:97893049-97893068 None:intergenic 25.0%
! TAATTTGATGGAGTAATCAA+GGG + chr6_3:97893083-97893102 None:intergenic 25.0%
! TCAATTAATATTGAACGAAG+GGG - chr6_3:97893343-97893362 Msa0967820:CDS 25.0%
! TAACCATTATCAAAATCATG+AGG + chr6_3:97893879-97893898 None:intergenic 25.0%
!!! CAAAACTTGTTGAAAAGTAA+GGG - chr6_3:97893903-97893922 Msa0967820:intron 25.0%
! TGATAAAGTAACCATTTCTT+CGG + chr6_3:97893049-97893068 None:intergenic 25.0%
! TAATTTGATGGAGTAATCAA+GGG + chr6_3:97893083-97893102 None:intergenic 25.0%
! TCAATTAATATTGAACGAAG+GGG - chr6_3:97893343-97893362 Msa0967820:CDS 25.0%
! TAACCATTATCAAAATCATG+AGG + chr6_3:97893879-97893898 None:intergenic 25.0%
!!! CAAAACTTGTTGAAAAGTAA+GGG - chr6_3:97893903-97893922 Msa0967820:intron 25.0%
!! ATGGCTTTAAGTTCTGTTAA+AGG - chr6_3:97892172-97892191 Msa0967820:CDS 30.0%
GAGTTATCAGCTAATTTCTA+TGG - chr6_3:97892247-97892266 Msa0967820:CDS 30.0%
TGTACAATATACATACATGC+AGG - chr6_3:97892584-97892603 Msa0967820:intron 30.0%
GTACAATATACATACATGCA+GGG - chr6_3:97892585-97892604 Msa0967820:intron 30.0%
AGATGACATCAAATCTCAAT+TGG - chr6_3:97892704-97892723 Msa0967820:intron 30.0%
ATGATGTATATATAGCTTGG+TGG - chr6_3:97892892-97892911 Msa0967820:intron 30.0%
CAAAGATGGAATGTACTATT+AGG - chr6_3:97892916-97892935 Msa0967820:intron 30.0%
! GAAGAAATGGTTACTTTATC+AGG - chr6_3:97893048-97893067 Msa0967820:intron 30.0%
GTAATTTGATGGAGTAATCA+AGG + chr6_3:97893084-97893103 None:intergenic 30.0%
AGGTGTCAATTAATATGAGA+AGG + chr6_3:97893141-97893160 None:intergenic 30.0%
TGAATAATGCATGTAGTCAA+AGG + chr6_3:97893161-97893180 None:intergenic 30.0%
GCATTATTTCAATAAGACAG+TGG - chr6_3:97893381-97893400 Msa0967820:CDS 30.0%
GCATGAAGTTATATGCATTT+AGG + chr6_3:97893525-97893544 None:intergenic 30.0%
TAAATGTGATCACATGTACA+TGG - chr6_3:97893632-97893651 Msa0967820:CDS 30.0%
AAATGTGATCACATGTACAT+GGG - chr6_3:97893633-97893652 Msa0967820:CDS 30.0%
!!! TTTGATGGTTTTGTTTGATC+AGG - chr6_3:97893696-97893715 Msa0967820:intron 30.0%
!! CCTTACTTTTCAACAAGTTT+TGG + chr6_3:97893905-97893924 None:intergenic 30.0%
!! CCAAAACTTGTTGAAAAGTA+AGG - chr6_3:97893902-97893921 Msa0967820:intron 30.0%
GATCAACAACTATTTGGTAA+TGG - chr6_3:97893939-97893958 Msa0967820:CDS 30.0%
!! ATGGCTTTAAGTTCTGTTAA+AGG - chr6_3:97892172-97892191 Msa0967820:CDS 30.0%
GAGTTATCAGCTAATTTCTA+TGG - chr6_3:97892247-97892266 Msa0967820:CDS 30.0%
TGTACAATATACATACATGC+AGG - chr6_3:97892584-97892603 Msa0967820:intron 30.0%
GTACAATATACATACATGCA+GGG - chr6_3:97892585-97892604 Msa0967820:intron 30.0%
AGATGACATCAAATCTCAAT+TGG - chr6_3:97892704-97892723 Msa0967820:intron 30.0%
ATGATGTATATATAGCTTGG+TGG - chr6_3:97892892-97892911 Msa0967820:intron 30.0%
CAAAGATGGAATGTACTATT+AGG - chr6_3:97892916-97892935 Msa0967820:intron 30.0%
! GAAGAAATGGTTACTTTATC+AGG - chr6_3:97893048-97893067 Msa0967820:intron 30.0%
GTAATTTGATGGAGTAATCA+AGG + chr6_3:97893084-97893103 None:intergenic 30.0%
AGGTGTCAATTAATATGAGA+AGG + chr6_3:97893141-97893160 None:intergenic 30.0%
TGAATAATGCATGTAGTCAA+AGG + chr6_3:97893161-97893180 None:intergenic 30.0%
GCATTATTTCAATAAGACAG+TGG - chr6_3:97893381-97893400 Msa0967820:CDS 30.0%
GCATGAAGTTATATGCATTT+AGG + chr6_3:97893525-97893544 None:intergenic 30.0%
TAAATGTGATCACATGTACA+TGG - chr6_3:97893632-97893651 Msa0967820:CDS 30.0%
AAATGTGATCACATGTACAT+GGG - chr6_3:97893633-97893652 Msa0967820:CDS 30.0%
!!! TTTGATGGTTTTGTTTGATC+AGG - chr6_3:97893696-97893715 Msa0967820:intron 30.0%
!! CCTTACTTTTCAACAAGTTT+TGG + chr6_3:97893905-97893924 None:intergenic 30.0%
!! CCAAAACTTGTTGAAAAGTA+AGG - chr6_3:97893902-97893921 Msa0967820:intron 30.0%
GATCAACAACTATTTGGTAA+TGG - chr6_3:97893939-97893958 Msa0967820:CDS 30.0%
! CTAATTGTACGAACAGCTTT+TGG + chr6_3:97892283-97892302 None:intergenic 35.0%
CAAAAGCTGTTCGTACAATT+AGG - chr6_3:97892281-97892300 Msa0967820:CDS 35.0%
TACAATTAGGAAAGCAGTTC+AGG - chr6_3:97892294-97892313 Msa0967820:CDS 35.0%
TTACTTGAACAAAGCAGTCA+TGG + chr6_3:97892372-97892391 None:intergenic 35.0%
! TTATCAGAGTCTTTTTCCCT+CGG - chr6_3:97892501-97892520 Msa0967820:CDS 35.0%
TGACATCAAATCTCAATTGG+AGG - chr6_3:97892707-97892726 Msa0967820:intron 35.0%
TCAGAACAAGAGACAGTATT+GGG + chr6_3:97892741-97892760 None:intergenic 35.0%
AGGCCATCAAGATTCAAAAA+GGG + chr6_3:97892994-97893013 None:intergenic 35.0%
AAGGCCATCAAGATTCAAAA+AGG + chr6_3:97892995-97893014 None:intergenic 35.0%
! GTGTTTGACTTTCATACATG+TGG + chr6_3:97893550-97893569 None:intergenic 35.0%
TTATCAAAATCATGAGGACG+TGG + chr6_3:97893873-97893892 None:intergenic 35.0%
!! CGTCCTCATGATTTTGATAA+TGG - chr6_3:97893873-97893892 Msa0967820:intron 35.0%
CACTCTGATCAACAACTATT+TGG - chr6_3:97893933-97893952 Msa0967820:CDS 35.0%
AAGAAGATATAGCAGAAGCA+TGG - chr6_3:97893983-97894002 Msa0967820:CDS 35.0%
! AGAAGATATAGCAGAAGCAT+GGG - chr6_3:97893984-97894003 Msa0967820:CDS 35.0%
! CTAATTGTACGAACAGCTTT+TGG + chr6_3:97892283-97892302 None:intergenic 35.0%
CAAAAGCTGTTCGTACAATT+AGG - chr6_3:97892281-97892300 Msa0967820:CDS 35.0%
TACAATTAGGAAAGCAGTTC+AGG - chr6_3:97892294-97892313 Msa0967820:CDS 35.0%
TTACTTGAACAAAGCAGTCA+TGG + chr6_3:97892372-97892391 None:intergenic 35.0%
! TTATCAGAGTCTTTTTCCCT+CGG - chr6_3:97892501-97892520 Msa0967820:CDS 35.0%
TGACATCAAATCTCAATTGG+AGG - chr6_3:97892707-97892726 Msa0967820:intron 35.0%
TCAGAACAAGAGACAGTATT+GGG + chr6_3:97892741-97892760 None:intergenic 35.0%
AGGCCATCAAGATTCAAAAA+GGG + chr6_3:97892994-97893013 None:intergenic 35.0%
AAGGCCATCAAGATTCAAAA+AGG + chr6_3:97892995-97893014 None:intergenic 35.0%
! GTGTTTGACTTTCATACATG+TGG + chr6_3:97893550-97893569 None:intergenic 35.0%
TTATCAAAATCATGAGGACG+TGG + chr6_3:97893873-97893892 None:intergenic 35.0%
!! CGTCCTCATGATTTTGATAA+TGG - chr6_3:97893873-97893892 Msa0967820:intron 35.0%
CACTCTGATCAACAACTATT+TGG - chr6_3:97893933-97893952 Msa0967820:CDS 35.0%
AAGAAGATATAGCAGAAGCA+TGG - chr6_3:97893983-97894002 Msa0967820:CDS 35.0%
! AGAAGATATAGCAGAAGCAT+GGG - chr6_3:97893984-97894003 Msa0967820:CDS 35.0%
TGTTAAGAATGAGAGTCGCA+TGG - chr6_3:97892321-97892340 Msa0967820:CDS 40.0%
GTTAAGAATGAGAGTCGCAT+GGG - chr6_3:97892322-97892341 Msa0967820:CDS 40.0%
ATGGAAATGGAGTCTAAGCA+AGG + chr6_3:97892353-97892372 None:intergenic 40.0%
GAACAAAGCAGTCATGGAAA+TGG + chr6_3:97892366-97892385 None:intergenic 40.0%
GACGACACATCAAATTTCAC+AGG - chr6_3:97892630-97892649 Msa0967820:intron 40.0%
GTCAGAACAAGAGACAGTAT+TGG + chr6_3:97892742-97892761 None:intergenic 40.0%
! TATAGCTTGGTGGACAAAGA+TGG - chr6_3:97892902-97892921 Msa0967820:intron 40.0%
TCAAGATTCAAAAAGGGAGC+AGG + chr6_3:97892988-97893007 None:intergenic 40.0%
! GCTCCCTTTTTGAATCTTGA+TGG - chr6_3:97892988-97893007 Msa0967820:intron 40.0%
TCTTGGCGAAAGCAGTAATA+AGG + chr6_3:97893014-97893033 None:intergenic 40.0%
ATTACTGCTTTCGCCAAGAA+AGG - chr6_3:97893015-97893034 Msa0967820:intron 40.0%
GCATTTAGGTGACACATCTA+TGG + chr6_3:97893511-97893530 None:intergenic 40.0%
! TGCATTTTTGCAGCAAATGC+TGG + chr6_3:97893792-97893811 None:intergenic 40.0%
TCTTCTTACTTGAGCGTTTG+TGG + chr6_3:97893970-97893989 None:intergenic 40.0%
TCAATGCTTAGTCCACTTAC+TGG - chr6_3:97894047-97894066 Msa0967820:CDS 40.0%
!! TTGATGGAGCATTGACGAAA+TGG + chr6_3:97894100-97894119 None:intergenic 40.0%
! TAAGCAGTGGTAGTGTTTGA+TGG + chr6_3:97894116-97894135 None:intergenic 40.0%
TGTTAAGAATGAGAGTCGCA+TGG - chr6_3:97892321-97892340 Msa0967820:CDS 40.0%
GTTAAGAATGAGAGTCGCAT+GGG - chr6_3:97892322-97892341 Msa0967820:CDS 40.0%
ATGGAAATGGAGTCTAAGCA+AGG + chr6_3:97892353-97892372 None:intergenic 40.0%
GAACAAAGCAGTCATGGAAA+TGG + chr6_3:97892366-97892385 None:intergenic 40.0%
GACGACACATCAAATTTCAC+AGG - chr6_3:97892630-97892649 Msa0967820:intron 40.0%
GTCAGAACAAGAGACAGTAT+TGG + chr6_3:97892742-97892761 None:intergenic 40.0%
! TATAGCTTGGTGGACAAAGA+TGG - chr6_3:97892902-97892921 Msa0967820:intron 40.0%
TCAAGATTCAAAAAGGGAGC+AGG + chr6_3:97892988-97893007 None:intergenic 40.0%
! GCTCCCTTTTTGAATCTTGA+TGG - chr6_3:97892988-97893007 Msa0967820:intron 40.0%
TCTTGGCGAAAGCAGTAATA+AGG + chr6_3:97893014-97893033 None:intergenic 40.0%
ATTACTGCTTTCGCCAAGAA+AGG - chr6_3:97893015-97893034 Msa0967820:intron 40.0%
GCATTTAGGTGACACATCTA+TGG + chr6_3:97893511-97893530 None:intergenic 40.0%
! TGCATTTTTGCAGCAAATGC+TGG + chr6_3:97893792-97893811 None:intergenic 40.0%
TCTTCTTACTTGAGCGTTTG+TGG + chr6_3:97893970-97893989 None:intergenic 40.0%
TCAATGCTTAGTCCACTTAC+TGG - chr6_3:97894047-97894066 Msa0967820:CDS 40.0%
!! TTGATGGAGCATTGACGAAA+TGG + chr6_3:97894100-97894119 None:intergenic 40.0%
! TAAGCAGTGGTAGTGTTTGA+TGG + chr6_3:97894116-97894135 None:intergenic 40.0%
!! TTTTCCCTCGGATTCGAGTT+AGG - chr6_3:97892513-97892532 Msa0967820:CDS 45.0%
CTCTCAGCGAATTTGCGTTT+GGG + chr6_3:97892671-97892690 None:intergenic 45.0%
TTCGGCTGTGAAACCTTTCT+TGG + chr6_3:97893031-97893050 None:intergenic 45.0%
AGGTTTCACAGCCGAAGAAA+TGG - chr6_3:97893035-97893054 Msa0967820:intron 45.0%
CACATGTACATGGGTCGTAT+TGG - chr6_3:97893642-97893661 Msa0967820:CDS 45.0%
TGATCAGGTGCTCACACAAT+AGG - chr6_3:97893711-97893730 Msa0967820:intron 45.0%
GATCAGGTGCTCACACAATA+GGG - chr6_3:97893712-97893731 Msa0967820:intron 45.0%
!! GGTGCAGATTTTTCAGAGCA+AGG - chr6_3:97893742-97893761 Msa0967820:intron 45.0%
!! AAGCAGAGTGCCCTTTTGAA+GGG - chr6_3:97893811-97893830 Msa0967820:intron 45.0%
TGTCATCACCCCCTTCAAAA+GGG + chr6_3:97893824-97893843 None:intergenic 45.0%
TTGTCATCACCCCCTTCAAA+AGG + chr6_3:97893825-97893844 None:intergenic 45.0%
! AGTCCACTTACTGGCATTGA+AGG - chr6_3:97894056-97894075 Msa0967820:CDS 45.0%
TCACCTTCAATGCCAGTAAG+TGG + chr6_3:97894062-97894081 None:intergenic 45.0%
! CTGGCATTGAAGGTGAAATC+AGG - chr6_3:97894066-97894085 Msa0967820:CDS 45.0%
!! TTTTCCCTCGGATTCGAGTT+AGG - chr6_3:97892513-97892532 Msa0967820:CDS 45.0%
CTCTCAGCGAATTTGCGTTT+GGG + chr6_3:97892671-97892690 None:intergenic 45.0%
TTCGGCTGTGAAACCTTTCT+TGG + chr6_3:97893031-97893050 None:intergenic 45.0%
AGGTTTCACAGCCGAAGAAA+TGG - chr6_3:97893035-97893054 Msa0967820:intron 45.0%
CACATGTACATGGGTCGTAT+TGG - chr6_3:97893642-97893661 Msa0967820:CDS 45.0%
TGATCAGGTGCTCACACAAT+AGG - chr6_3:97893711-97893730 Msa0967820:intron 45.0%
GATCAGGTGCTCACACAATA+GGG - chr6_3:97893712-97893731 Msa0967820:intron 45.0%
!! GGTGCAGATTTTTCAGAGCA+AGG - chr6_3:97893742-97893761 Msa0967820:intron 45.0%
!! AAGCAGAGTGCCCTTTTGAA+GGG - chr6_3:97893811-97893830 Msa0967820:intron 45.0%
TGTCATCACCCCCTTCAAAA+GGG + chr6_3:97893824-97893843 None:intergenic 45.0%
TTGTCATCACCCCCTTCAAA+AGG + chr6_3:97893825-97893844 None:intergenic 45.0%
! AGTCCACTTACTGGCATTGA+AGG - chr6_3:97894056-97894075 Msa0967820:CDS 45.0%
TCACCTTCAATGCCAGTAAG+TGG + chr6_3:97894062-97894081 None:intergenic 45.0%
! CTGGCATTGAAGGTGAAATC+AGG - chr6_3:97894066-97894085 Msa0967820:CDS 45.0%
GTCTCCTAACTCGAATCCGA+GGG + chr6_3:97892520-97892539 None:intergenic 50.0%
TGTCTCCTAACTCGAATCCG+AGG + chr6_3:97892521-97892540 None:intergenic 50.0%
CCTCTCAGCGAATTTGCGTT+TGG + chr6_3:97892672-97892691 None:intergenic 50.0%
CCAAACGCAAATTCGCTGAG+AGG - chr6_3:97892669-97892688 Msa0967820:intron 50.0%
ACATCTTAGCCCTTGCTGCT+AGG - chr6_3:97892760-97892779 Msa0967820:intron 50.0%
CATCTTAGCCCTTGCTGCTA+GGG - chr6_3:97892761-97892780 Msa0967820:intron 50.0%
ACACCAAACACGACACATCG+AGG - chr6_3:97893566-97893585 Msa0967820:CDS 50.0%
ATGCCTCGATGTGTCGTGTT+TGG + chr6_3:97893572-97893591 None:intergenic 50.0%
! CTCACACAATAGGGCTAGTG+AGG - chr6_3:97893721-97893740 Msa0967820:intron 50.0%
!! CAAGCAGAGTGCCCTTTTGA+AGG - chr6_3:97893810-97893829 Msa0967820:intron 50.0%
!! AGCAGAGTGCCCTTTTGAAG+GGG - chr6_3:97893812-97893831 Msa0967820:intron 50.0%
GTCTCCTAACTCGAATCCGA+GGG + chr6_3:97892520-97892539 None:intergenic 50.0%
TGTCTCCTAACTCGAATCCG+AGG + chr6_3:97892521-97892540 None:intergenic 50.0%
CCTCTCAGCGAATTTGCGTT+TGG + chr6_3:97892672-97892691 None:intergenic 50.0%
CCAAACGCAAATTCGCTGAG+AGG - chr6_3:97892669-97892688 Msa0967820:intron 50.0%
ACATCTTAGCCCTTGCTGCT+AGG - chr6_3:97892760-97892779 Msa0967820:intron 50.0%
CATCTTAGCCCTTGCTGCTA+GGG - chr6_3:97892761-97892780 Msa0967820:intron 50.0%
ACACCAAACACGACACATCG+AGG - chr6_3:97893566-97893585 Msa0967820:CDS 50.0%
ATGCCTCGATGTGTCGTGTT+TGG + chr6_3:97893572-97893591 None:intergenic 50.0%
! CTCACACAATAGGGCTAGTG+AGG - chr6_3:97893721-97893740 Msa0967820:intron 50.0%
!! CAAGCAGAGTGCCCTTTTGA+AGG - chr6_3:97893810-97893829 Msa0967820:intron 50.0%
!! AGCAGAGTGCCCTTTTGAAG+GGG - chr6_3:97893812-97893831 Msa0967820:intron 50.0%
TTAGCCCTTGCTGCTAGGGA+CGG - chr6_3:97892765-97892784 Msa0967820:intron 55.0%
AACACCGTCCCTAGCAGCAA+GGG + chr6_3:97892772-97892791 None:intergenic 55.0%
!! GCAGAGTGCCCTTTTGAAGG+GGG - chr6_3:97893813-97893832 Msa0967820:intron 55.0%
! CGTGGTGTCGAGGAGTCAAA+AGG + chr6_3:97893855-97893874 None:intergenic 55.0%
! ATCATGAGGACGTGGTGTCG+AGG + chr6_3:97893865-97893884 None:intergenic 55.0%
TTAGCCCTTGCTGCTAGGGA+CGG - chr6_3:97892765-97892784 Msa0967820:intron 55.0%
AACACCGTCCCTAGCAGCAA+GGG + chr6_3:97892772-97892791 None:intergenic 55.0%
!! GCAGAGTGCCCTTTTGAAGG+GGG - chr6_3:97893813-97893832 Msa0967820:intron 55.0%
! CGTGGTGTCGAGGAGTCAAA+AGG + chr6_3:97893855-97893874 None:intergenic 55.0%
! ATCATGAGGACGTGGTGTCG+AGG + chr6_3:97893865-97893884 None:intergenic 55.0%
CAACACCGTCCCTAGCAGCA+AGG + chr6_3:97892773-97892792 None:intergenic 60.0%
!! TGCTAGGGACGGTGTTGCTG+AGG - chr6_3:97892776-97892795 Msa0967820:intron 60.0%
CAACACCGTCCCTAGCAGCA+AGG + chr6_3:97892773-97892792 None:intergenic 60.0%
!! TGCTAGGGACGGTGTTGCTG+AGG - chr6_3:97892776-97892795 Msa0967820:intron 60.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 97892172 97894136 97892172 ID=Msa0967820;Name=Msa0967820
chr6_3 mRNA 97892172 97894136 97892172 ID=Msa0967820-mRNA-1;Parent=Msa0967820;Name=Msa0967820-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|4|0|329
chr6_3 exon 97893921 97894136 97893921 ID=Msa0967820-mRNA-1:exon:18266;Parent=Msa0967820-mRNA-1
chr6_3 exon 97893511 97893702 97893511 ID=Msa0967820-mRNA-1:exon:18265;Parent=Msa0967820-mRNA-1
chr6_3 exon 97893239 97893401 97893239 ID=Msa0967820-mRNA-1:exon:18264;Parent=Msa0967820-mRNA-1
chr6_3 exon 97892172 97892590 97892172 ID=Msa0967820-mRNA-1:exon:18263;Parent=Msa0967820-mRNA-1
chr6_3 CDS 97893921 97894136 97893921 ID=Msa0967820-mRNA-1:cds;Parent=Msa0967820-mRNA-1
chr6_3 CDS 97893511 97893702 97893511 ID=Msa0967820-mRNA-1:cds;Parent=Msa0967820-mRNA-1
chr6_3 CDS 97893239 97893401 97893239 ID=Msa0967820-mRNA-1:cds;Parent=Msa0967820-mRNA-1
chr6_3 CDS 97892172 97892590 97892172 ID=Msa0967820-mRNA-1:cds;Parent=Msa0967820-mRNA-1
Gene Sequence

>Msa0967820

ATGGCTTTAAGTTCTGTTAAAGGCTTCTTTTTATTGCTATTAATTACATGTATGATTGGGATGAATACTTCAGCTGAGTTATCAGCTAATTTCTATGGTAAAACTTGTCCAAAAGCTGTTCGTACAATTAGGAAAGCAGTTCAGGATGCTGTTAAGAATGAGAGTCGCATGGGAGCATCCTTGCTTAGACTCCATTTCCATGACTGCTTTGTTCAAGGATGTGATGCATCAGCATTGTTAGACGACACATCAAATTTCACAGGTGAGAAGAATGCATTCCCAAACGCAAATTCGCTGAGAGGTTTTGAGTTAATAGATGACATCAAATCTCAATTGGAGGATATGTGTCCCAATACTGTCTCTTGTTCTGACATCTTAGCCCTTGCTGCTAGGGACGGTGTTGCTGAGCTTGGTGGACAAAGATGGAATGTACTATTAGGCAGAAGAGATTCAACAACAGCAAACTTAAGTGAAGCTAATACGTTACCTGCTCCCTTTTTGAATCTTGATGGCCTTATTACTGCTTTCGCCAAGAAAGGTTTCACAGCCGAAGAAATGGTTACTTTATCAGGTGCTCACACAATAGGGCTAGTGAGGTGCAGATTTTTCAGAGCAAGGATATACAATGAAACAAACATAGATCCAGCATTTGCTGCAAAAATGCAAGCAGAGTGCCCTTTTGAAGGGGGTGATGACAATTTCTCTCCTTTTGACTCCTCGACACCACGTCCTCATGATTTTGATAATGGTTACTACCAAAACTTGTTGAAAAGTAAGGGTCTGATACACTCTGATCAACAACTATTTGGTAATGGAACATCCACAAACGCTCAAGTAAGAAGATATAGCAGAAGCATGGGAAGTTTCAAAAAAGACTTTGCAGATGCAATGTTTAAGATGTCAATGCTTAGTCCACTTACTGGCATTGAAGGTGAAATCAGGACAAACTGCCATTTCGTCAATGCTCCATCAAACACTACCACTGCTTAA

Protein sequence

>Msa0967820

MALSSVKGFFLLLLITCMIGMNTSAELSANFYGKTCPKAVRTIRKAVQDAVKNESRMGASLLRLHFHDCFVQGCDASALLDDTSNFTGEKNAFPNANSLRGFELIDDIKSQLEDMCPNTVSCSDILALAARDGVAELGGQRWNVLLGRRDSTTANLSEANTLPAPFLNLDGLITAFAKKGFTAEEMVTLSGAHTIGLVRCRFFRARIYNETNIDPAFAAKMQAECPFEGGDDNFSPFDSSTPRPHDFDNGYYQNLLKSKGLIHSDQQLFGNGTSTNAQVRRYSRSMGSFKKDFADAMFKMSMLSPLTGIEGEIRTNCHFVNAPSNTTTA*