AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0349100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0349100 MtrunA17_Chr3g0085091 78.519 959 158 5 2 958 238 1150 0.0 1457
Msa0349100 MtrunA17_Chr3g0085111 77.325 957 172 3 2 958 232 1143 0.0 1447
Msa0349100 MtrunA17_Chr3g0085171 76.667 960 178 4 2 958 219 1135 0.0 1429
Msa0349100 MtrunA17_Chr3g0085161 77.110 948 171 3 12 958 106 1008 0.0 1425
Msa0349100 MtrunA17_Chr3g0085131 75.653 957 180 3 2 958 233 1136 0.0 1420
Msa0349100 MtrunA17_Chr3g0085521 73.375 954 210 3 5 958 230 1139 0.0 1372
Msa0349100 MtrunA17_Chr3g0085751 73.418 948 209 2 11 958 238 1142 0.0 1364
Msa0349100 MtrunA17_Chr3g0091011 74.968 783 146 4 12 793 228 961 0.0 1142
Msa0349100 MtrunA17_Chr3g0085711 75.297 757 144 2 202 958 1 714 0.0 1108
Msa0349100 MtrunA17_Chr3g0087701 60.126 953 323 10 8 957 240 1138 0.0 1028
Msa0349100 MtrunA17_Chr3g0084081 60.086 932 316 7 27 958 275 1150 0.0 1011
Msa0349100 MtrunA17_Chr3g0084061 58.906 932 331 9 29 957 268 1150 0.0 985
Msa0349100 MtrunA17_Chr3g0084051 57.771 933 330 9 27 957 275 1145 0.0 975
Msa0349100 MtrunA17_Chr3g0087581 56.467 951 361 7 8 957 241 1139 0.0 973
Msa0349100 MtrunA17_Chr3g0086221 56.797 949 358 10 11 957 240 1138 0.0 958
Msa0349100 MtrunA17_Chr3g0084031 55.870 954 359 10 8 957 258 1153 0.0 953
Msa0349100 MtrunA17_Chr3g0086091 54.822 954 377 9 7 957 48 950 0.0 948
Msa0349100 MtrunA17_Chr3g0086621 56.224 948 362 8 11 957 241 1136 0.0 947
Msa0349100 MtrunA17_Chr3g0086161 55.380 948 371 10 11 957 241 1137 0.0 946
Msa0349100 MtrunA17_Chr3g0087541 54.565 953 372 10 11 957 259 1156 0.0 901
Msa0349100 MtrunA17_Chr3g0086741 69.711 657 152 4 8 664 265 874 0.0 884
Msa0349100 MtrunA17_Chr3g0085551 67.015 670 173 4 12 681 136 757 0.0 870
Msa0349100 MtrunA17_Chr3g0085451 54.536 915 355 13 11 920 231 1089 0.0 833
Msa0349100 MtrunA17_Chr3g0085701 80.040 501 100 0 458 958 451 951 0.0 816
Msa0349100 MtrunA17_Chr3g0085701 67.568 222 70 1 2 223 233 452 1.87e-78 275
Msa0349100 MtrunA17_Chr3g0087731 50.896 949 345 15 11 957 52 881 0.0 808
Msa0349100 MtrunA17_Chr3g0082791 56.158 812 289 11 8 815 256 1004 0.0 802
Msa0349100 MtrunA17_Chr3g0085801 51.957 843 313 12 11 850 261 1014 0.0 733
Msa0349100 MtrunA17_Chr3g0085801 27.596 366 165 14 643 957 731 1047 7.85e-12 69.7
Msa0349100 MtrunA17_Chr3g0085651 47.184 941 391 19 7 936 246 1091 0.0 704
Msa0349100 MtrunA17_Chr3g0085651 51.734 346 153 4 582 926 1005 1337 1.75e-89 312
Msa0349100 MtrunA17_Chr3g0085651 32.828 396 202 17 583 934 870 1245 9.99e-28 121
Msa0349100 MtrunA17_Chr3g0086151 55.014 698 262 6 7 703 237 883 0.0 702
Msa0349100 MtrunA17_Chr3g0086181 54.571 700 263 7 7 704 237 883 0.0 694
Msa0349100 MtrunA17_Chr3g0085331 44.953 1070 388 32 11 957 259 1250 0.0 687
Msa0349100 MtrunA17_Chr3g0086071 54.885 696 262 8 151 846 1 644 0.0 677
Msa0349100 MtrunA17_Chr3g0085501 45.929 958 392 25 11 934 259 1124 0.0 657
Msa0349100 MtrunA17_Chr3g0085501 47.546 326 160 3 582 907 882 1196 4.77e-69 251
Msa0349100 MtrunA17_Chr7g0221481 56.508 653 229 5 11 656 245 849 0.0 652
Msa0349100 MtrunA17_Chr3g0085561 49.457 829 309 21 11 814 228 971 0.0 638
Msa0349100 MtrunA17_Chr3g0085471 45.283 954 402 26 27 934 275 1154 0.0 628
Msa0349100 MtrunA17_Chr3g0085471 51.323 378 171 6 582 957 912 1278 1.27e-92 320
Msa0349100 MtrunA17_Chr8g0352861 36.731 1040 515 20 3 957 257 1238 9.17e-176 544
Msa0349100 MtrunA17_Chr3g0085431 51.959 587 194 8 120 704 2 502 1.99e-175 519
Msa0349100 MtrunA17_Chr8g0352831 37.801 1037 506 19 3 957 260 1239 2.25e-170 530
Msa0349100 MtrunA17_Chr3g0091061 34.342 1057 529 26 2 958 249 1240 2.21e-155 490
Msa0349100 MtrunA17_Chr3g0082131 36.686 1014 511 30 11 957 257 1206 2.58e-152 481
Msa0349100 MtrunA17_Chr3g0084971 33.716 1044 504 25 27 952 264 1237 1.61e-146 467
Msa0349100 MtrunA17_Chr1g0164581 35.182 1046 518 31 11 957 233 1217 2.62e-146 466
Msa0349100 MtrunA17_Chr3g0090141 33.050 1059 547 23 2 958 249 1247 3.28e-144 461
Msa0349100 MtrunA17_Chr2g0299151 33.869 1057 530 25 3 957 231 1220 1.54e-143 459
Msa0349100 MtrunA17_Chr4g0025391 33.519 1077 525 25 6 957 252 1262 1.71e-142 457
Msa0349100 MtrunA17_Chr3g0087841 34.309 991 530 23 2 958 249 1152 1.82e-142 454
Msa0349100 MtrunA17_Chr3g0090691 33.804 1062 527 27 2 958 249 1239 1.73e-140 451
Msa0349100 MtrunA17_Chr8g0348931 34.600 1026 504 23 2 926 256 1215 4.75e-140 449
Msa0349100 MtrunA17_Chr2g0309721 32.714 1076 542 27 2 958 249 1261 2.88e-139 448
Msa0349100 MtrunA17_Chr3g0089871 34.252 1016 515 22 12 937 258 1210 9.19e-138 444
Msa0349100 MtrunA17_Chr3g0091081 35.436 951 471 25 2 909 249 1099 4.50e-135 436
Msa0349100 MtrunA17_Chr1g0169901 36.611 844 445 20 11 837 247 1017 7.25e-134 429
Msa0349100 MtrunA17_Chr3g0089761 32.096 1078 538 24 7 958 254 1263 6.20e-133 431
Msa0349100 MtrunA17_Chr3g0090651 38.633 717 369 15 2 704 249 908 3.20e-132 423
Msa0349100 MtrunA17_Chr2g0282991 34.040 943 541 17 2 931 247 1121 6.79e-132 428
Msa0349100 MtrunA17_Chr3g0089211 32.991 1070 529 25 12 958 306 1310 1.69e-131 428
Msa0349100 MtrunA17_Chr8g0356251 33.204 1033 542 26 13 958 285 1256 4.35e-129 421
Msa0349100 MtrunA17_Chr3g0092261 31.291 1077 551 23 6 958 297 1308 5.27e-129 421
Msa0349100 MtrunA17_Chr3g0089591 31.989 1066 583 26 2 957 254 1287 7.74e-129 421
Msa0349100 MtrunA17_Chr3g0089651 32.325 1058 524 23 12 942 263 1255 1.50e-128 419
Msa0349100 MtrunA17_Chr3g0083751 32.153 1017 548 25 20 957 273 1226 2.08e-126 412
Msa0349100 MtrunA17_Chr3g0089471 32.488 1065 578 27 2 957 250 1282 4.52e-126 413
Msa0349100 MtrunA17_Chr3g0089421 32.420 1058 546 27 2 958 248 1237 4.58e-126 412
Msa0349100 MtrunA17_Chr7g0248531 38.034 702 365 16 9 697 244 888 6.56e-126 404
Msa0349100 MtrunA17_Chr3g0090431 34.200 962 518 28 2 935 121 995 1.50e-125 407
Msa0349100 MtrunA17_Chr3g0089541 31.407 1073 559 21 2 957 253 1265 1.75e-125 411
Msa0349100 MtrunA17_Chr3g0113791 35.062 964 530 23 2 957 233 1108 8.46e-125 405
Msa0349100 MtrunA17_Chr3g0090371 32.361 1063 548 22 2 958 249 1246 2.03e-123 405
Msa0349100 MtrunA17_Chr2g0299091 37.668 746 393 16 2 728 217 909 2.92e-123 399
Msa0349100 MtrunA17_Chr3g0089601 37.187 718 379 14 2 704 247 907 1.26e-122 395
Msa0349100 MtrunA17_Chr2g0299121 36.097 784 419 16 2 759 243 970 4.02e-122 397
Msa0349100 MtrunA17_Chr3g0083591 32.200 1000 545 21 29 957 242 1179 1.60e-121 399
Msa0349100 MtrunA17_Chr3g0083621 31.796 1019 558 24 15 957 274 1231 7.43e-121 398
Msa0349100 MtrunA17_Chr3g0089811 31.089 1084 553 27 2 958 249 1265 7.95e-120 395
Msa0349100 MtrunA17_Chr3g0089961 36.439 719 382 16 2 702 249 910 1.12e-117 382
Msa0349100 MtrunA17_Chr3g0089251 34.124 970 523 25 12 928 288 1194 3.79e-117 389
Msa0349100 MtrunA17_Chr3g0092241 33.795 867 469 19 2 822 249 1056 1.30e-116 383
Msa0349100 MtrunA17_Chr3g0113781 37.431 724 391 14 2 719 28 695 1.94e-116 374
Msa0349100 MtrunA17_Chr3g0089781 36.568 711 379 15 2 697 249 902 1.82e-115 378
Msa0349100 MtrunA17_Chr1g0147141 35.144 902 474 27 2 881 253 1065 3.13e-115 379
Msa0349100 MtrunA17_Chr3g0089501 37.592 681 353 14 2 667 247 870 1.12e-114 373
Msa0349100 MtrunA17_Chr3g0082351 32.340 940 498 24 2 931 248 1059 3.31e-113 374
Msa0349100 MtrunA17_Chr4g0008461 32.205 1034 555 26 6 957 233 1202 4.24e-113 376
Msa0349100 MtrunA17_Chr1g0164391 31.894 1019 515 31 2 957 249 1151 9.57e-113 375
Msa0349100 MtrunA17_Chr3g0083641 31.076 1004 558 23 29 957 253 1197 1.42e-112 374
Msa0349100 MtrunA17_Chr3g0089991 32.264 1029 529 27 2 937 253 1206 3.92e-111 372
Msa0349100 MtrunA17_Chr3g0089991 26.429 420 226 17 583 958 891 1271 1.91e-14 78.2
Msa0349100 MtrunA17_Chr1g0164611 37.106 698 365 15 2 680 253 895 6.12e-111 367
Msa0349100 MtrunA17_Chr6g0484551 37.500 696 335 17 2 683 251 860 8.62e-111 362
Msa0349100 MtrunA17_Chr3g0083681 31.007 1003 555 21 29 957 257 1196 6.66e-110 367
Msa0349100 MtrunA17_Chr1g0164631 37.151 716 386 13 3 707 258 920 2.51e-109 361
Msa0349100 MtrunA17_Chr3g0082311 32.684 976 513 31 2 937 249 1120 6.02e-109 363
Msa0349100 MtrunA17_Chr3g0080871 31.724 1015 538 28 29 957 262 1207 5.56e-108 362
Msa0349100 MtrunA17_Chr2g0299101 36.323 669 358 11 2 655 243 858 6.02e-106 349
Msa0349100 MtrunA17_Chr3g0090401 36.530 709 361 17 2 697 460 1092 1.08e-105 359
Msa0349100 MtrunA17_Chr3g0090401 33.000 200 99 5 790 958 1267 1462 8.13e-16 82.8
Msa0349100 MtrunA17_Chr3g0083721 35.920 696 368 16 30 707 215 850 1.67e-102 342
Msa0349100 MtrunA17_Chr3g0091121 35.014 734 359 20 144 853 5 644 4.29e-101 331
Msa0349100 MtrunA17_Chr5g0446611 37.538 666 351 15 12 667 260 870 7.24e-101 335
Msa0349100 MtrunA17_Chr3g0091971 30.596 1023 515 31 28 957 239 1159 2.22e-99 337
Msa0349100 MtrunA17_Chr3g0123111 32.777 958 512 31 13 953 244 1086 1.89e-98 334
Msa0349100 MtrunA17_Chr3g0082391 37.175 616 330 12 2 613 250 812 4.30e-98 327
Msa0349100 MtrunA17_Chr6g0468451 31.661 957 533 29 13 953 245 1096 3.52e-97 331
Msa0349100 MtrunA17_Chr6g0468021 32.563 952 505 30 13 953 245 1070 1.09e-96 329
Msa0349100 MtrunA17_Chr6g0468121 31.387 959 502 33 17 953 250 1074 1.48e-96 329
Msa0349100 MtrunA17_Chr5g0415471 31.224 964 522 32 12 957 257 1097 2.85e-95 325
Msa0349100 MtrunA17_Chr3g0085481 47.312 372 144 5 471 798 4 367 3.25e-95 305
Msa0349100 MtrunA17_Chr6g0468271 30.833 960 539 27 9 953 239 1088 5.67e-95 325
Msa0349100 MtrunA17_Chr3g0085791 58.099 284 116 3 675 957 4 285 6.50e-95 301
Msa0349100 MtrunA17_Chr1g0168901 33.523 704 389 14 9 691 218 863 2.02e-94 319
Msa0349100 MtrunA17_Chr5g0430511 33.533 835 450 23 3 813 234 987 2.47e-94 321
Msa0349100 MtrunA17_Chr5g0430641 33.683 858 444 27 2 835 232 988 1.24e-93 319
Msa0349100 MtrunA17_Chr3g0084811 33.887 723 394 16 29 727 421 1083 3.29e-92 318
Msa0349100 MtrunA17_Chr4g0027251 34.180 866 460 30 2 835 232 1019 2.48e-91 313
Msa0349100 MtrunA17_Chr5g0431051 33.174 835 436 25 2 813 232 967 5.05e-91 311
Msa0349100 MtrunA17_Chr5g0414311 30.300 967 528 32 12 957 259 1100 1.56e-90 312
Msa0349100 MtrunA17_Chr7g0244231 32.825 853 437 28 2 813 227 984 2.96e-90 309
Msa0349100 MtrunA17_Chr2g0316291 30.154 975 502 36 12 955 259 1085 2.02e-88 306
Msa0349100 MtrunA17_Chr5g0430291 32.277 852 447 28 2 813 232 993 3.59e-88 304
Msa0349100 MtrunA17_Chr5g0430581 32.173 833 443 25 2 813 227 958 8.50e-88 302
Msa0349100 MtrunA17_Chr3g0085931 30.457 985 506 33 13 953 245 1094 2.25e-86 300
Msa0349100 MtrunA17_Chr5g0429951 33.693 834 436 28 2 813 232 970 3.65e-85 295
Msa0349100 MtrunA17_Chr6g0467961 34.161 685 367 23 13 689 245 853 4.47e-85 292
Msa0349100 MtrunA17_Chr6g0470081 29.958 958 539 31 13 953 245 1087 5.04e-85 296
Msa0349100 MtrunA17_Chr3g0113481 36.942 582 308 12 12 590 243 768 9.12e-85 289
Msa0349100 MtrunA17_Chr1g0189511 73.333 195 47 3 103 294 1 193 7.34e-84 271
Msa0349100 MtrunA17_Chr1g0189511 88.732 71 8 0 393 463 194 264 5.73e-31 123
Msa0349100 MtrunA17_Chr3g0082101 33.333 690 350 16 2 680 253 843 2.04e-83 289
Msa0349100 MtrunA17_Chr6g0470011 30.713 954 537 33 13 953 245 1087 2.19e-83 292
Msa0349100 MtrunA17_Chr3g0082321 34.211 570 313 11 72 638 267 777 4.00e-83 285
Msa0349100 MtrunA17_Chr5g0429961 32.692 832 439 27 2 813 232 962 8.99e-83 288
Msa0349100 MtrunA17_Chr5g0430441 33.013 833 438 27 2 813 232 965 3.91e-82 286
Msa0349100 MtrunA17_Chr5g0430721 31.829 842 455 26 2 810 273 1028 4.27e-82 287
Msa0349100 MtrunA17_Chr5g0414181 34.258 721 394 21 2 713 244 893 1.85e-81 284
Msa0349100 MtrunA17_Chr3g0089441 31.105 778 403 19 300 958 8 771 6.87e-81 278
Msa0349100 MtrunA17_Chr5g0430951 33.194 720 389 17 2 705 232 875 6.00e-80 278
Msa0349100 MtrunA17_Chr5g0417251 33.091 689 378 21 12 690 20 635 1.45e-79 272
Msa0349100 MtrunA17_Chr5g0413811 34.225 710 350 25 12 698 31 646 7.97e-79 270
Msa0349100 MtrunA17_Chr5g0414201 31.012 761 418 23 11 757 252 919 9.34e-79 276
Msa0349100 MtrunA17_Chr5g0430621 33.093 831 444 28 12 813 242 989 2.76e-78 276
Msa0349100 MtrunA17_Chr1g0155321 30.523 842 451 29 12 812 237 985 1.80e-77 273
Msa0349100 MtrunA17_Chr5g0430141 32.173 833 448 26 2 812 232 969 6.14e-77 272
Msa0349100 MtrunA17_Chr6g0456131 31.647 850 463 27 10 812 243 1021 1.18e-76 271
Msa0349100 MtrunA17_Chr1g0155991 30.346 837 457 27 13 812 240 987 8.41e-75 266
Msa0349100 MtrunA17_Chr3g0082811 33.008 615 334 22 13 614 244 793 7.36e-74 259
Msa0349100 MtrunA17_Chr6g0468151 28.601 972 536 32 13 953 242 1086 1.26e-72 261
Msa0349100 MtrunA17_Chr6g0470021 29.584 818 470 23 13 812 136 865 7.93e-72 255
Msa0349100 MtrunA17_Chr4g0009781 30.665 737 429 21 5 719 239 915 1.48e-71 256
Msa0349100 MtrunA17_Chr3g0082881 32.075 636 341 21 13 618 244 818 1.59e-70 251
Msa0349100 MtrunA17_Chr3g0082371 35.038 528 256 14 130 649 3 451 3.38e-70 241
Msa0349100 MtrunA17_Chr6g0468201 29.579 808 418 26 163 953 2 675 1.84e-68 243
Msa0349100 MtrunA17_Chr4g0010261 30.255 823 489 26 12 815 246 1002 6.32e-68 246
Msa0349100 MtrunA17_Chr3g0082891 31.376 647 358 21 3 622 231 818 2.97e-66 239
Msa0349100 MtrunA17_Chr3g0084041 59.794 194 76 1 464 657 1 192 5.90e-66 220
Msa0349100 MtrunA17_Chr5g0415551 33.708 623 342 18 30 646 142 699 9.53e-66 235
Msa0349100 MtrunA17_Chr4g0010221 29.495 851 494 28 12 835 246 1017 7.96e-65 237
Msa0349100 MtrunA17_Chr3g0087301 29.738 992 504 40 2 957 245 1079 1.34e-64 237
Msa0349100 MtrunA17_Chr3g0089911 34.874 476 255 9 2 474 248 671 1.35e-64 231
Msa0349100 MtrunA17_Chr6g0467911 31.757 592 334 14 13 598 245 772 2.80e-64 232
Msa0349100 MtrunA17_Chr2g0299141 35.402 435 221 7 62 484 18 404 7.07e-63 219
Msa0349100 MtrunA17_Chr6g0456121 29.867 827 448 26 10 812 241 959 1.51e-62 229
Msa0349100 MtrunA17_Chr3g0082871 33.723 513 279 15 13 520 244 700 2.90e-62 224
Msa0349100 MtrunA17_Chr4g0010251 29.556 856 484 31 12 835 246 1014 5.54e-62 228
Msa0349100 MtrunA17_Chr4g0010201 31.519 698 404 26 5 682 239 882 6.09e-62 229
Msa0349100 MtrunA17_Chr5g0410481 27.419 992 545 33 12 955 207 1071 1.19e-61 228
Msa0349100 MtrunA17_Chr1g0189521 84.348 115 18 0 476 590 1 115 1.22e-60 202
Msa0349100 MtrunA17_Chr5g0410351 28.826 954 532 33 30 952 244 1081 2.91e-60 224
Msa0349100 MtrunA17_Chr3g0085721 66.026 156 53 0 2 157 222 377 7.32e-58 203
Msa0349100 MtrunA17_Chr6g0468361 32.072 502 272 13 163 660 2 438 9.31e-58 206
Msa0349100 MtrunA17_Chr6g0470001 28.035 799 459 23 164 953 3 694 7.14e-57 209
Msa0349100 MtrunA17_Chr3g0078361 34.940 415 220 9 12 424 75 441 1.32e-54 196
Msa0349100 MtrunA17_Chr4g0020501 38.509 322 176 5 409 719 479 789 4.98e-53 200
Msa0349100 MtrunA17_Chr4g0020501 39.931 288 159 5 2 286 203 479 7.45e-49 187
Msa0349100 MtrunA17_Chr6g0471941 34.120 466 239 15 13 471 255 659 1.62e-52 199
Msa0349100 MtrunA17_Chr8g0392511 36.869 396 198 11 197 590 1 346 3.84e-52 186
Msa0349100 MtrunA17_Chr3g0085621 54.348 184 81 2 777 957 83 266 1.02e-50 180
Msa0349100 MtrunA17_Chr3g0085621 47.143 140 49 1 820 934 4 143 1.47e-27 113
Msa0349100 MtrunA17_Chr3g0091961 31.090 431 239 7 76 504 5 379 1.14e-50 184
Msa0349100 MtrunA17_Chr8g0351811 31.865 681 372 28 300 957 8 619 1.57e-50 189
Msa0349100 MtrunA17_Chr5g0410161 27.590 975 529 39 30 957 391 1235 4.24e-50 192
Msa0349100 MtrunA17_Chr8g0338391 33.983 462 239 14 16 471 257 658 6.91e-49 188
Msa0349100 MtrunA17_Chr2g0309151 31.602 462 244 12 5 454 31 432 2.62e-48 179
Msa0349100 MtrunA17_Chr8g0337891 32.301 452 246 12 11 459 253 647 3.49e-48 184
Msa0349100 MtrunA17_Chr5g0410261 25.543 967 523 32 2 916 231 1052 3.55e-48 186
Msa0349100 MtrunA17_Chr7g0218941 26.675 761 423 22 13 715 257 940 5.23e-48 185
Msa0349100 MtrunA17_Chr8g0338671 33.333 450 237 12 13 456 139 531 1.88e-47 179
Msa0349100 MtrunA17_Chr4g0051651 33.857 446 219 13 8 430 277 669 2.32e-47 180
Msa0349100 MtrunA17_Chr3g0091041 39.649 285 147 7 2 285 249 509 8.59e-47 176
Msa0349100 MtrunA17_Chr3g0089931 40.072 277 157 5 2 276 234 503 1.53e-46 175
Msa0349100 MtrunA17_Chr8g0338861 28.350 709 400 25 58 722 7 651 4.48e-46 176
Msa0349100 MtrunA17_Chr2g0282891 31.136 440 212 9 59 496 12 362 3.17e-45 167
Msa0349100 MtrunA17_Chr6g0475491 33.850 452 226 14 16 457 261 649 4.95e-45 175
Msa0349100 MtrunA17_Chr1g0189551 32.008 478 258 11 8 478 276 693 7.95e-45 175
Msa0349100 MtrunA17_Chr6g0468101 29.088 581 337 14 398 958 529 1054 1.69e-44 174
Msa0349100 MtrunA17_Chr6g0468101 42.353 255 136 6 13 264 244 490 4.49e-43 170
Msa0349100 MtrunA17_Chr6g0468331 31.224 474 260 14 9 468 240 661 1.70e-44 172
Msa0349100 MtrunA17_Chr8g0355411 29.206 630 330 22 27 619 266 816 3.34e-44 172
Msa0349100 MtrunA17_Chr5g0433771 28.490 702 348 22 12 697 267 830 6.81e-44 172
Msa0349100 MtrunA17_Chr5g0415481 31.102 508 269 18 197 699 6 437 5.17e-43 163
Msa0349100 MtrunA17_Chr5g0414231 41.339 254 137 6 12 262 255 499 7.35e-43 164
Msa0349100 MtrunA17_Chr7g0257221 29.956 454 261 8 5 456 268 666 1.07e-42 168
Msa0349100 MtrunA17_Chr7g0257191 30.398 477 273 10 5 478 269 689 1.92e-42 167
Msa0349100 MtrunA17_Chr8g0352211 30.786 458 257 10 3 456 1243 1644 2.24e-42 169
Msa0349100 MtrunA17_Chr8g0346831 31.808 437 259 10 16 448 260 661 3.35e-42 167
Msa0349100 MtrunA17_Chr7g0257201 29.263 475 279 7 5 477 268 687 3.70e-42 166
Msa0349100 MtrunA17_Chr7g0248221 30.998 471 259 10 12 478 264 672 4.88e-42 166
Msa0349100 MtrunA17_Chr6g0468111 36.803 269 159 7 19 286 96 354 5.98e-42 161
Msa0349100 MtrunA17_Chr8g0338361 37.023 262 145 5 13 265 121 371 1.10e-41 160
Msa0349100 MtrunA17_Chr5g0430341 32.215 596 301 25 229 813 6 509 4.74e-41 159
Msa0349100 MtrunA17_Chr8g0355071 37.657 239 146 2 5 242 63 299 8.45e-41 152
Msa0349100 MtrunA17_Chr8g0338251 37.857 280 150 6 6 274 235 501 1.49e-40 160
Msa0349100 MtrunA17_Chr1g0169951 31.422 436 244 8 20 454 281 662 1.96e-40 160
Msa0349100 MtrunA17_Chr3g0089921 28.627 517 252 10 556 958 2 515 4.06e-40 156
Msa0349100 MtrunA17_Chr8g0338621 39.600 250 144 4 13 260 257 501 8.08e-40 157
Msa0349100 MtrunA17_Chr4g0071021 42.986 221 108 4 2 210 215 429 8.17e-40 153
Msa0349100 MtrunA17_Chr5g0417301 32.353 442 200 16 13 442 218 572 3.40e-39 154
Msa0349100 MtrunA17_Chr5g0415511 40.310 258 142 6 12 266 255 503 4.87e-39 155
Msa0349100 MtrunA17_Chr8g0338261 38.246 285 165 6 6 286 249 526 7.68e-39 156
Msa0349100 MtrunA17_Chr7g0257541 30.110 455 253 13 6 454 268 663 1.73e-37 152
Msa0349100 MtrunA17_Chr5g0410301 24.804 891 491 34 9 849 209 970 2.59e-37 151
Msa0349100 MtrunA17_Chr8g0338681 39.474 228 124 6 4 225 24 243 7.30e-37 139
Msa0349100 MtrunA17_Chr7g0248431 38.340 253 143 5 12 260 264 507 2.77e-36 145
Msa0349100 MtrunA17_Chr6g0468341 40.789 228 124 5 13 237 246 465 3.97e-36 147
Msa0349100 MtrunA17_Chr6g0468341 27.510 498 281 18 484 958 464 904 1.31e-23 107
Msa0349100 MtrunA17_Chr5g0414161 33.611 360 208 12 365 710 40 382 4.30e-36 141
Msa0349100 MtrunA17_Chr3g0089431 38.140 215 129 2 2 214 253 465 1.51e-35 141
Msa0349100 MtrunA17_Chr5g0414301 27.987 611 324 23 217 812 13 522 2.21e-35 142
Msa0349100 MtrunA17_Chr3g0078351 32.474 388 218 14 552 928 30 384 3.76e-35 139
Msa0349100 MtrunA17_Chr4g0037421 26.323 718 399 24 16 692 322 950 4.48e-35 144
Msa0349100 MtrunA17_Chr4g0071011 32.326 430 250 12 404 813 72 480 7.17e-35 140
Msa0349100 MtrunA17_Chr1g0169941 31.579 285 184 4 7 286 25 303 1.39e-34 135
Msa0349100 MtrunA17_Chr3g0112511 25.911 741 432 29 10 720 255 908 1.10e-33 140
Msa0349100 MtrunA17_Chr7g0221491 63.542 96 35 0 862 957 1 96 1.36e-33 124
Msa0349100 MtrunA17_Chr3g0081341 28.095 719 394 33 12 697 331 959 1.44e-33 139
Msa0349100 MtrunA17_Chr3g0081391 26.522 690 379 27 12 677 267 852 2.04e-33 139
Msa0349100 MtrunA17_Chr5g0430331 41.000 200 100 4 12 200 238 430 2.73e-33 134
Msa0349100 MtrunA17_Chr8g0351821 42.857 203 106 5 13 210 245 442 8.92e-32 130
Msa0349100 MtrunA17_Chr5g0430901 29.939 491 253 15 2 456 232 667 3.21e-31 132
Msa0349100 MtrunA17_Chr5g0430901 34.441 331 181 13 487 812 546 845 6.09e-24 108
Msa0349100 MtrunA17_Chr7g0257551 33.884 242 150 2 4 240 185 421 3.41e-31 127
Msa0349100 MtrunA17_Chr3g0080771 26.360 717 414 28 9 697 265 895 5.00e-31 131
Msa0349100 MtrunA17_Chr5g0404741 28.011 714 400 35 10 691 249 880 8.78e-31 130
Msa0349100 MtrunA17_Chr5g0414171 38.710 217 122 6 41 256 214 420 1.23e-30 125
Msa0349100 MtrunA17_Chr3g0081361 26.993 552 315 20 12 541 276 761 2.66e-30 129
Msa0349100 MtrunA17_Chr2g0299001 26.612 729 421 32 6 700 252 900 2.91e-30 129
Msa0349100 MtrunA17_Chr5g0410021 25.392 701 424 25 16 693 254 878 3.04e-30 129
Msa0349100 MtrunA17_Chr1g0151481 26.609 699 395 30 24 692 281 891 3.67e-30 129
Msa0349100 MtrunA17_Chr2g0308491 40.437 183 104 2 11 190 78 258 5.89e-30 119
Msa0349100 MtrunA17_Chr3g0101231 26.136 704 420 27 9 692 273 896 6.67e-30 127
Msa0349100 MtrunA17_Chr3g0080731 26.294 734 407 31 5 693 261 905 1.74e-29 126
Msa0349100 MtrunA17_Chr7g0219851 26.720 756 413 33 6 713 246 908 2.09e-29 126
Msa0349100 MtrunA17_Chr3g0081211 25.601 582 339 20 19 578 273 782 2.74e-29 125
Msa0349100 MtrunA17_Chr3g0080741 26.278 704 406 29 24 699 282 900 3.01e-29 125
Msa0349100 MtrunA17_Chr3g0080751 25.798 721 423 31 5 697 261 897 4.24e-29 125
Msa0349100 MtrunA17_Chr3g0089941 43.590 156 78 2 552 697 35 190 4.79e-29 115
Msa0349100 MtrunA17_Chr3g0101181 24.895 711 429 23 10 694 273 904 4.89e-29 125
Msa0349100 MtrunA17_Chr3g0113741 31.611 329 189 9 662 957 87 412 6.26e-29 120
Msa0349100 MtrunA17_Chr5g0410401 30.184 434 235 15 381 792 422 809 1.03e-28 124
Msa0349100 MtrunA17_Chr3g0113801 31.611 329 189 9 662 957 123 448 1.10e-28 120
Msa0349100 MtrunA17_Chr3g0081371 28.374 652 344 30 12 616 276 851 2.95e-28 122
Msa0349100 MtrunA17_Chr5g0409991 25.000 700 423 27 16 693 257 876 9.20e-28 121
Msa0349100 MtrunA17_Chr3g0113511 30.793 328 193 8 662 957 87 412 1.00e-27 117
Msa0349100 MtrunA17_Chr3g0101321 26.508 713 424 29 2 697 249 878 1.82e-27 120
Msa0349100 MtrunA17_Chr7g0257251 38.217 157 97 0 81 237 10 166 2.93e-27 109
Msa0349100 MtrunA17_Chr3g0100731 25.390 705 424 30 6 692 15 635 2.98e-27 118
Msa0349100 MtrunA17_Chr3g0080721 26.234 709 428 30 9 699 3 634 5.40e-27 117
Msa0349100 MtrunA17_Chr3g0092291 36.226 265 117 8 202 465 1 214 6.67e-27 114
Msa0349100 MtrunA17_Chr4g0010491 36.813 182 109 3 12 190 246 424 2.14e-26 113
Msa0349100 MtrunA17_Chr3g0101011 26.380 743 397 36 24 730 289 917 6.84e-26 115
Msa0349100 MtrunA17_Chr6g0468381 28.178 472 282 17 498 958 85 510 1.49e-25 112
Msa0349100 MtrunA17_Chr6g0468381 41.333 75 41 1 163 237 2 73 8.07e-11 65.9
Msa0349100 MtrunA17_Chr4g0020411 44.355 124 68 1 62 185 27 149 9.60e-25 101
Msa0349100 MtrunA17_Chr3g0100831 24.930 714 421 30 12 703 266 886 1.03e-24 111
Msa0349100 MtrunA17_Chr3g0101391 25.039 635 384 25 77 694 14 573 2.39e-24 108
Msa0349100 MtrunA17_Chr5g0414291 43.373 166 86 4 12 174 259 419 2.63e-24 107
Msa0349100 MtrunA17_Chr5g0410001 24.583 720 421 31 4 693 249 876 4.90e-24 108
Msa0349100 MtrunA17_Chr3g0080601 25.272 736 421 29 5 704 260 902 9.66e-24 108
Msa0349100 MtrunA17_Chr2g0308471 47.899 119 56 2 590 702 1 119 1.44e-23 97.4
Msa0349100 MtrunA17_Chr3g0101271 24.090 714 436 27 9 704 241 866 1.90e-23 107
Msa0349100 MtrunA17_Chr3g0085351 67.778 90 15 1 836 925 1 76 3.28e-23 94.4
Msa0349100 MtrunA17_Chr3g0081191 25.952 578 352 22 12 578 267 779 4.27e-23 106
Msa0349100 MtrunA17_Chr3g0100681 26.522 460 261 18 9 454 76 472 6.18e-23 104
Msa0349100 MtrunA17_Chr3g0101241 23.950 714 437 27 9 704 241 866 1.32e-22 104
Msa0349100 MtrunA17_Chr6g0468251 26.253 499 285 20 478 957 4 438 2.16e-22 101
Msa0349100 MtrunA17_Chr3g0100961 25.177 707 420 28 10 696 264 881 2.22e-22 103
Msa0349100 MtrunA17_Chr7g0255751 39.267 191 112 4 374 560 30 220 6.89e-22 95.5
Msa0349100 MtrunA17_Chr1g0189351 25.662 717 408 32 12 700 263 882 6.94e-22 102
Msa0349100 MtrunA17_Chr3g0101201 33.659 205 128 4 9 208 265 466 2.14e-21 100
Msa0349100 MtrunA17_Chr3g0101251 26.512 645 380 28 65 692 283 850 2.25e-21 100
Msa0349100 MtrunA17_Chr8g0360991 26.327 490 311 17 10 482 232 688 3.58e-21 100
Msa0349100 MtrunA17_Chr3g0101221 26.841 611 369 22 23 622 281 824 5.11e-21 99.4
Msa0349100 MtrunA17_Chr3g0082401 28.941 387 238 13 583 958 153 513 6.84e-21 97.8
Msa0349100 MtrunA17_Chr3g0082401 29.781 366 177 13 584 938 49 345 1.18e-17 87.4
Msa0349100 MtrunA17_Chr3g0101211 31.641 256 161 7 10 259 55 302 1.07e-20 95.9
Msa0349100 MtrunA17_Chr3g0080791 26.606 545 321 19 9 534 265 749 1.64e-20 97.8
Msa0349100 MtrunA17_Chr5g0410031 29.592 294 182 13 4 286 250 529 2.51e-20 97.1
Msa0349100 MtrunA17_Chr3g0081181 32.941 255 145 11 16 259 260 499 5.69e-20 95.9
Msa0349100 MtrunA17_Chr3g0100971 25.746 536 321 21 10 531 261 733 6.01e-20 95.5
Msa0349100 MtrunA17_Chr3g0101331 24.449 544 325 21 12 531 268 749 1.99e-19 94.4
Msa0349100 MtrunA17_Chr1g0197241 25.645 698 406 30 29 698 900 1512 2.79e-19 94.0
Msa0349100 MtrunA17_Chr3g0100761 25.746 536 321 21 10 531 221 693 3.97e-19 92.8
Msa0349100 MtrunA17_Chr3g0100851 23.836 537 317 22 9 531 153 611 5.83e-19 92.4
Msa0349100 MtrunA17_Chr7g0255761 30.370 270 138 7 20 286 102 324 6.06e-19 89.4
Msa0349100 MtrunA17_Chr3g0100801 27.119 472 235 20 9 454 228 616 6.26e-19 92.4
Msa0349100 MtrunA17_Chr5g0409971 30.742 283 172 13 16 286 258 528 9.48e-19 92.0
Msa0349100 MtrunA17_Chr3g0094301 29.730 259 167 9 9 259 265 516 2.10e-18 90.9
Msa0349100 MtrunA17_Chr7g0229761 29.730 259 167 9 9 259 265 516 2.10e-18 90.9
Msa0349100 MtrunA17_Chr3g0113491 30.189 318 179 10 649 957 1 284 2.64e-18 86.7
Msa0349100 MtrunA17_Chr3g0089511 30.749 387 210 15 599 958 38 393 3.31e-18 88.2
Msa0349100 MtrunA17_Chr6g0468131 27.518 407 215 17 567 953 1 347 6.58e-18 86.7
Msa0349100 MtrunA17_Chr3g0080651 24.765 638 391 27 76 699 251 813 7.69e-18 89.0
Msa0349100 MtrunA17_Chr2g0299131 38.621 145 76 3 2 136 80 221 2.89e-17 82.0
Msa0349100 MtrunA17_Chr3g0089611 32.558 258 138 9 712 958 46 278 7.18e-17 82.0
Msa0349100 MtrunA17_Chr3g0090491 44.340 106 50 2 587 683 1 106 9.01e-17 77.4
Msa0349100 MtrunA17_Chr1g0159111 24.178 426 269 17 19 433 246 628 1.19e-16 85.1
Msa0349100 MtrunA17_Chr5g0417291 36.628 172 97 6 508 675 36 199 1.30e-16 79.3
Msa0349100 MtrunA17_Chr3g0086611 57.143 70 29 1 889 957 1 70 2.59e-16 74.7
Msa0349100 MtrunA17_Chr3g0082341 34.437 151 97 2 808 958 5 153 1.03e-15 75.9
Msa0349100 MtrunA17_Chr5g0414211 27.612 402 243 15 498 886 2 368 1.61e-15 80.1
Msa0349100 MtrunA17_Chr2g0282981 35.915 142 90 1 12 152 257 398 2.42e-15 79.7
Msa0349100 MtrunA17_Chr1g0189271 31.579 209 124 7 12 208 103 304 3.90e-15 77.8
Msa0349100 MtrunA17_Chr3g0091951 29.412 204 126 4 768 957 129 328 3.95e-15 77.8
Msa0349100 MtrunA17_Chr4g0048421 24.029 412 274 15 19 416 245 631 4.58e-15 80.1
Msa0349100 MtrunA17_Chr3g0084351 26.255 259 176 8 9 259 190 441 9.93e-15 78.6
Msa0349100 MtrunA17_Chr7g0248411 39.024 123 69 2 12 131 198 317 1.11e-14 76.3
Msa0349100 MtrunA17_Chr2g0313351 24.823 987 559 52 27 938 255 1133 6.42e-14 76.6
Msa0349100 MtrunA17_Chr8g0374351 25.646 503 294 22 30 477 196 673 8.78e-14 75.9
Msa0349100 MtrunA17_Chr3g0104421 37.374 99 58 2 140 238 7 101 1.71e-13 67.4
Msa0349100 MtrunA17_Chr3g0084821 30.303 165 109 3 795 958 1 160 7.20e-13 67.8
Msa0349100 MtrunA17_Chr8g0374461 25.292 514 281 23 30 477 212 688 8.59e-13 72.4
Msa0349100 MtrunA17_Chr2g0330121 25.000 676 354 32 20 624 106 699 4.47e-12 70.5
Msa0349100 MtrunA17_Chr8g0344071 24.018 433 235 16 22 433 538 897 1.09e-11 69.3
Msa0349100 MtrunA17_Chr3g0096971 34.659 176 104 8 12 179 2 174 3.68e-11 63.2
Msa0349100 MtrunA17_Chr6g0468141 43.333 90 49 2 60 149 176 263 3.95e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0349100 AT3G14470.1 35.211 710 373 12 12 694 260 909 1.88e-115 380
Msa0349100 AT3G14470.2 35.211 710 373 12 12 694 260 909 1.88e-115 380
Msa0349100 AT3G14460.1 30.896 971 560 18 3 931 248 1149 1.86e-109 370
Msa0349100 AT3G14460.1 30.547 311 199 10 659 957 1113 1418 3.67e-19 94.4
Msa0349100 AT3G07040.1 27.907 473 251 15 16 480 268 658 2.50e-31 132
Msa0349100 AT1G59218.1 25.477 734 431 30 13 711 248 900 4.34e-30 129
Msa0349100 AT1G59218.2 25.477 734 431 30 13 711 248 900 4.34e-30 129
Msa0349100 AT1G59218.3 25.477 734 431 30 13 711 248 900 4.34e-30 129
Msa0349100 AT1G58848.1 25.477 734 431 30 13 711 248 900 4.34e-30 129
Msa0349100 AT1G58848.2 25.477 734 431 30 13 711 248 900 4.34e-30 129
Msa0349100 AT1G58390.1 25.390 705 431 25 6 692 246 873 2.15e-28 123
Msa0349100 AT1G58390.2 25.390 705 431 25 6 692 246 873 2.15e-28 123
Msa0349100 AT1G59124.2 25.320 703 408 27 13 684 248 864 5.01e-28 122
Msa0349100 AT1G58807.1 25.320 703 408 27 13 684 248 864 5.01e-28 122
Msa0349100 AT1G58400.1 26.391 629 364 24 88 693 316 868 8.46e-28 121
Msa0349100 AT1G58400.3 26.391 629 364 24 88 693 326 878 9.44e-28 121
Msa0349100 AT1G58400.2 26.391 629 364 24 88 693 326 878 9.44e-28 121
Msa0349100 AT3G50950.2 25.470 691 398 27 6 677 239 831 3.86e-27 119
Msa0349100 AT3G50950.1 25.470 691 398 27 6 677 239 831 3.86e-27 119
Msa0349100 AT5G35450.2 25.931 698 417 28 10 690 247 861 2.90e-26 116
Msa0349100 AT5G35450.1 25.931 698 417 28 10 690 247 861 2.90e-26 116
Msa0349100 AT5G43470.3 26.803 735 434 30 10 716 249 907 1.91e-25 114
Msa0349100 AT5G43470.2 26.803 735 434 30 10 716 249 907 1.91e-25 114
Msa0349100 AT5G43470.4 26.803 735 434 30 10 716 249 907 1.91e-25 114
Msa0349100 AT5G43470.1 26.803 735 434 30 10 716 249 907 1.91e-25 114
Msa0349100 AT1G53350.1 26.106 701 424 26 10 691 247 872 2.58e-25 113
Msa0349100 AT1G59124.1 25.145 692 400 29 13 672 248 853 6.87e-25 112
Msa0349100 AT1G58807.2 25.145 692 400 29 13 672 248 853 6.87e-25 112
Msa0349100 AT5G47250.1 27.778 450 236 19 59 501 288 655 8.96e-25 111
Msa0349100 AT4G27220.2 26.623 462 243 14 27 477 224 600 2.04e-23 107
Msa0349100 AT4G27220.1 26.623 462 243 14 27 477 216 592 2.51e-23 107
Msa0349100 AT1G59620.2 26.367 512 272 20 3 478 108 550 4.73e-23 105
Msa0349100 AT5G43730.4 23.435 687 399 24 20 675 246 836 3.37e-21 100
Msa0349100 AT5G43730.1 23.435 687 399 24 20 675 246 836 3.37e-21 100
Msa0349100 AT5G43730.3 23.435 687 399 24 20 675 246 836 3.37e-21 100
Msa0349100 AT5G43730.2 23.435 687 399 24 20 675 246 836 3.37e-21 100
Msa0349100 AT5G43730.5 23.435 687 399 24 20 675 246 836 3.37e-21 100
Msa0349100 AT1G50180.1 28.019 414 229 13 30 421 271 637 3.40e-21 100
Msa0349100 AT1G12210.1 26.174 447 269 15 20 459 251 643 1.38e-20 98.2
Msa0349100 AT1G12210.3 26.174 447 269 15 20 459 209 601 1.96e-20 97.8
Msa0349100 AT1G12210.2 26.174 447 269 15 20 459 209 601 1.96e-20 97.8
Msa0349100 AT3G46710.1 27.312 465 252 20 5 455 247 639 3.99e-20 96.7
Msa0349100 AT5G48620.6 26.451 741 429 33 10 716 249 907 4.27e-20 96.7
Msa0349100 AT5G48620.1 26.451 741 429 33 10 716 249 907 4.27e-20 96.7
Msa0349100 AT5G48620.4 26.451 741 429 33 10 716 249 907 4.27e-20 96.7
Msa0349100 AT5G48620.2 26.451 741 429 33 10 716 249 907 4.27e-20 96.7
Msa0349100 AT5G48620.3 26.451 741 429 33 10 716 249 907 4.27e-20 96.7
Msa0349100 AT5G48620.5 26.451 741 429 33 10 716 249 907 4.27e-20 96.7
Msa0349100 AT1G12220.3 25.974 693 404 28 4 676 115 718 8.66e-20 95.5
Msa0349100 AT1G12220.1 25.974 693 404 28 4 676 236 839 1.02e-19 95.5
Msa0349100 AT1G12220.2 25.974 693 404 28 4 676 236 839 1.02e-19 95.5
Msa0349100 AT1G12280.1 24.887 663 399 25 29 676 260 838 2.80e-19 94.4
Msa0349100 AT1G58602.2 30.000 230 139 8 16 230 259 481 8.98e-19 92.8
Msa0349100 AT1G58602.1 30.000 230 139 8 16 230 259 481 8.98e-19 92.8
Msa0349100 AT3G46730.1 26.058 591 320 29 59 632 301 791 9.60e-19 92.4
Msa0349100 AT4G10780.1 22.667 675 410 25 27 676 255 842 1.33e-18 92.0
Msa0349100 AT4G10780.2 22.667 675 410 25 27 676 255 842 1.38e-18 92.0
Msa0349100 AT4G27190.1 26.962 293 182 8 3 281 222 496 1.84e-18 91.7
Msa0349100 AT5G63020.1 26.848 257 166 8 10 260 239 479 9.81e-18 89.4
Msa0349100 AT1G61180.2 24.265 408 248 16 24 413 251 615 1.93e-17 88.2
Msa0349100 AT1G12290.1 30.588 255 159 9 27 275 257 499 1.99e-17 88.2
Msa0349100 AT1G61180.1 24.265 408 248 16 24 413 251 615 2.41e-17 87.8
Msa0349100 AT1G12290.4 30.588 255 159 9 27 275 215 457 2.65e-17 87.8
Msa0349100 AT1G12290.3 30.588 255 159 9 27 275 215 457 2.65e-17 87.8
Msa0349100 AT1G12290.2 30.588 255 159 9 27 275 215 457 2.65e-17 87.8
Msa0349100 AT5G05400.1 24.093 689 394 28 20 680 250 837 2.66e-17 87.8
Msa0349100 AT5G05400.2 24.203 690 392 28 20 680 81 668 3.98e-17 87.0
Msa0349100 AT5G05400.3 24.203 690 392 28 20 680 81 668 3.98e-17 87.0
Msa0349100 AT1G10920.1 25.192 520 304 19 6 499 121 581 6.26e-17 86.3
Msa0349100 AT1G10920.2 25.192 520 304 19 6 499 121 581 6.26e-17 86.3
Msa0349100 AT1G10920.4 25.192 520 304 19 6 499 121 581 6.26e-17 86.3
Msa0349100 AT4G26090.1 27.165 254 164 7 19 266 247 485 1.26e-16 85.5
Msa0349100 AT1G61190.4 26.639 244 160 8 24 260 252 483 6.27e-16 83.2
Msa0349100 AT1G61190.2 26.639 244 160 8 24 260 252 483 7.52e-16 83.2
Msa0349100 AT1G61190.3 26.639 244 160 8 24 260 252 483 7.52e-16 83.2
Msa0349100 AT1G61190.1 26.639 244 160 8 24 260 252 483 8.09e-16 83.2
Msa0349100 AT1G15890.1 28.216 241 158 6 24 260 252 481 1.06e-15 82.4
Msa0349100 AT1G15890.2 28.216 241 158 6 24 260 92 321 1.41e-15 82.0
Msa0349100 AT5G43740.1 23.529 680 414 26 20 675 245 842 1.67e-15 82.0
Msa0349100 AT5G43740.2 23.529 680 414 26 20 675 245 842 1.67e-15 82.0
Msa0349100 AT3G46530.1 30.545 275 168 11 4 266 239 502 2.32e-15 81.3
Msa0349100 AT1G58410.1 26.059 472 287 23 30 478 268 700 2.94e-15 81.3
Msa0349100 AT1G58410.4 26.059 472 287 23 30 478 268 700 2.94e-15 81.3
Msa0349100 AT1G58410.2 26.059 472 287 23 30 478 268 700 2.94e-15 81.3
Msa0349100 AT1G61300.2 27.049 244 156 8 24 260 140 368 5.66e-15 80.1
Msa0349100 AT1G61300.1 27.049 244 156 8 24 260 140 368 6.01e-15 80.1
Msa0349100 AT1G10920.5 25.113 442 253 15 82 499 24 411 1.45e-14 78.2
Msa0349100 AT1G10920.3 25.113 442 253 15 82 499 24 411 1.45e-14 78.2
Msa0349100 AT1G51480.1 29.108 213 138 6 20 227 247 451 1.80e-14 78.6
Msa0349100 AT1G69550.1 30.789 380 221 17 387 740 868 1231 3.33e-13 74.7
Msa0349100 AT1G69550.1 24.037 986 581 43 9 939 341 1213 4.63e-13 74.3
Msa0349100 AT5G44510.3 24.577 769 418 38 6 719 296 957 3.41e-13 74.7
Msa0349100 AT5G44510.2 24.577 769 418 38 6 719 296 957 3.66e-13 74.3
Msa0349100 AT5G44510.1 24.577 769 418 38 6 719 296 957 4.32e-13 74.3
Msa0349100 AT5G44510.4 24.577 769 418 38 6 719 296 957 4.41e-13 74.3
Msa0349100 AT1G61310.1 25.911 247 166 8 24 260 253 492 6.38e-12 70.5
Msa0349100 AT1G63880.2 28.226 248 139 9 20 261 284 498 3.70e-11 67.8
Msa0349100 AT1G63880.1 28.226 248 139 9 20 261 284 498 3.97e-11 67.8

Find 224 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAGAAGCTTTCCATTTC+AGG 0.079361 3_1:-12299684 Msa0349100:CDS
AAAGGAAGGCTTCAAATTTC+AGG 0.157316 3_1:-12300014 Msa0349100:CDS
AAATTTGAAGCCTTCCTTTA+AGG 0.165018 3_1:+12300018 None:intergenic
CCACCCAGATACTTCATTTA+AGG 0.168392 3_1:-12301288 Msa0349100:CDS
TAACTCGAAGCCATCAAATT+AGG 0.202998 3_1:+12299015 None:intergenic
ATTGCCTTAAATGAAGTATC+TGG 0.235314 3_1:+12301284 None:intergenic
ACCGCTCTCCTTGCTCCTTT+TGG 0.263133 3_1:+12298698 None:intergenic
TTGGCTATCAATTCAAGATT+TGG 0.263519 3_1:+12301193 None:intergenic
TCCAGTATCTTAACCCATTC+AGG 0.268762 3_1:+12301091 None:intergenic
TGATGATCCCTGAACCAATT+TGG 0.269376 3_1:+12299786 None:intergenic
CTTCGCACTTTAACTATAAC+AGG 0.270725 3_1:-12299180 Msa0349100:CDS
GATACTTCATTTAAGGCAAT+TGG 0.287479 3_1:-12301281 Msa0349100:CDS
CAATTCTAGAGATACTAAAT+TGG 0.298356 3_1:+12299758 None:intergenic
CCCTGTAGTTTATTATTCTT+AGG 0.310360 3_1:+12298857 None:intergenic
TATCACTCTCTATTCTTAAA+CGG 0.311378 3_1:+12300588 None:intergenic
GCAGAACTCGACCACCTTAA+AGG 0.313104 3_1:-12300032 Msa0349100:CDS
GAGGTAGCAGCTTTCCAAAT+TGG 0.314566 3_1:-12299800 Msa0349100:CDS
ATGAGCATACAAATGGAATT+AGG 0.316731 3_1:+12300260 None:intergenic
GCAGCTTTCCAAATTGGTTC+AGG 0.320176 3_1:-12299794 Msa0349100:CDS
TTGGAAGTTGAAGACTTCTT+TGG 0.321175 3_1:-12299249 Msa0349100:CDS
AGCCTCATGAGGTTTCTATT+TGG 0.326483 3_1:+12299840 None:intergenic
TATCACCCTCTATTCTTAAA+CGG 0.331693 3_1:+12300711 None:intergenic
TCAAGAGATTTAATAGTTGA+TGG 0.338637 3_1:+12298898 None:intergenic
CCTTTAGCTCTGAAGAGATT+GGG 0.348156 3_1:-12301142 Msa0349100:CDS
ACTTCCAATTCTTTAAGAAA+TGG 0.351429 3_1:+12299264 None:intergenic
CATTTGGTGCTGCCTTGATT+TGG 0.354446 3_1:-12300534 Msa0349100:CDS
CATTTGGTGCTGCCTTGATT+TGG 0.354446 3_1:-12300657 Msa0349100:CDS
CAGTCCATTTCTTAAAGAAT+TGG 0.354867 3_1:-12299268 Msa0349100:CDS
AATTAGGGCATCTTTCTATT+CGG 0.359516 3_1:+12299031 None:intergenic
AAAGTTTCAAGGGATCTAAA+TGG 0.363076 3_1:+12299603 None:intergenic
AGAAAGATGCCCTAATTTGA+TGG 0.367927 3_1:-12299025 Msa0349100:CDS
CCTTCCTTGTTTGCAAAAGT+TGG 0.372240 3_1:-12299466 Msa0349100:CDS
ATTGCCCAAGTGGTGGCAAC+TGG 0.374854 3_1:+12299715 None:intergenic
ATCACTCTCTATTCTTAAAC+GGG 0.375666 3_1:+12300589 None:intergenic
TTTAGTATCTCTAGAATTGT+TGG 0.380924 3_1:-12299754 Msa0349100:CDS
TCCTTTAGCTCTGAAGAGAT+TGG 0.384104 3_1:-12301143 Msa0349100:CDS
ATCACCCTCTATTCTTAAAC+GGG 0.384333 3_1:+12300712 None:intergenic
CTCAAAGGACACGCCACATT+TGG 0.389302 3_1:-12300550 Msa0349100:CDS
CTCAAAGGACACGCCACATT+TGG 0.389302 3_1:-12300673 Msa0349100:CDS
AACTCGAAGCCATCAAATTA+GGG 0.389455 3_1:+12299016 None:intergenic
TGTTCCCAGTTGCCACCACT+TGG 0.390415 3_1:-12299720 Msa0349100:CDS
AAGGATGACCCTTTCCAATC+TGG 0.393204 3_1:+12299338 None:intergenic
AGAGAGGACCATTCTACATT+TGG 0.393770 3_1:+12299225 None:intergenic
ATTAACCCTCTTATCCCCTT+TGG 0.394176 3_1:+12300119 None:intergenic
TCTTGCCTAGAGAAGATTCC+TGG 0.395833 3_1:+12301356 None:intergenic
AAGGAAGGCTTCAAATTTCA+GGG 0.403827 3_1:-12300013 Msa0349100:CDS
TTGGAAAGGGTCATCCTTTG+TGG 0.409480 3_1:-12299333 Msa0349100:CDS
AAATGAATTTCCATCCAGAT+TGG 0.411439 3_1:-12299352 Msa0349100:CDS
AGGGTGAATTAATCAAGCTT+TGG 0.412832 3_1:-12300931 Msa0349100:CDS
ACCTGAATGGGTTAAGATAC+TGG 0.417028 3_1:-12301092 Msa0349100:CDS
AAGGAATGGTTATGTCTTGA+AGG 0.429985 3_1:-12299555 Msa0349100:CDS
TAAAATTCTCTGAACCTGAA+TGG 0.431097 3_1:-12301105 Msa0349100:CDS
ATGGCATTATTACTGATTGT+TGG 0.431196 3_1:+12300807 None:intergenic
TTAGTATCTCTAGAATTGTT+GGG 0.435387 3_1:-12299753 Msa0349100:CDS
CCCAATCTCTTCAGAGCTAA+AGG 0.437927 3_1:+12301142 None:intergenic
CTCACTGATATTATCAGCCT+TGG 0.439268 3_1:+12299407 None:intergenic
ATTCGAAACGAAGAAGAGTT+AGG 0.439874 3_1:-12300869 Msa0349100:CDS
ATGGTACAAGCCCAGGGTTA+TGG 0.440414 3_1:-12300455 Msa0349100:CDS
TTACGGATGTTGTCTTTCAA+TGG 0.441266 3_1:-12300371 Msa0349100:CDS
GCTACCTCTGTAGTCATTGA+TGG 0.441449 3_1:+12299815 None:intergenic
AACAAGGAAGGTGTTGAGGC+AGG 0.442081 3_1:+12299478 None:intergenic
AAAATTCTCTGAACCTGAAT+GGG 0.444147 3_1:-12301104 Msa0349100:CDS
TATTCCGTGACAGCCTGAAA+TGG 0.445798 3_1:+12299671 None:intergenic
ATTGGATGAGAGTGACAGTT+GGG 0.446872 3_1:-12301263 Msa0349100:CDS
AGAATCCCGTTTAAGAATAG+AGG 0.447203 3_1:-12300717 Msa0349100:CDS
AAGATGCCAAAGGGGATAAG+AGG 0.447814 3_1:-12300125 Msa0349100:CDS
ATGAGTTTGCGAAAATTTGA+TGG 0.448732 3_1:+12300188 None:intergenic
CAAATGTGGCGTGTCCTTTG+AGG 0.452131 3_1:+12300551 None:intergenic
CAAATGTGGCGTGTCCTTTG+AGG 0.452131 3_1:+12300674 None:intergenic
CAAATCAATGAGCATACAAA+TGG 0.455613 3_1:+12300253 None:intergenic
AGCAAAACAACGCTTCAGAT+TGG 0.455964 3_1:+12300991 None:intergenic
GTAGTTTATTATTCTTAGGT+TGG 0.456873 3_1:+12298861 None:intergenic
TTTGTTGAAGTGTAAGTATG+AGG 0.456990 3_1:-12300897 Msa0349100:CDS
TATGTATGTCATACGATGAA+TGG 0.459586 3_1:-12299920 Msa0349100:CDS
TACAAAGCTCTTGAAGCAAA+GGG 0.462527 3_1:+12299529 None:intergenic
AATCAGGAAATTGTCACATA+AGG 0.462868 3_1:+12298655 None:intergenic
TGCTGCCTTGATTTGGAAGA+TGG 0.464001 3_1:-12300527 Msa0349100:CDS
TGCTGCCTTGATTTGGAAGA+TGG 0.464001 3_1:-12300650 Msa0349100:CDS
ATCTTTAGAAGTATCGCATC+AGG 0.465735 3_1:-12301503 Msa0349100:CDS
TATCACCATCTTCCAAATCA+AGG 0.468318 3_1:+12300522 None:intergenic
TATCACCATCTTCCAAATCA+AGG 0.468318 3_1:+12300645 None:intergenic
GAATTGAAGCCTCCAACTCT+TGG 0.470003 3_1:+12299430 None:intergenic
AAATGTAGAATGGTCCTCTC+TGG 0.470306 3_1:-12299223 Msa0349100:CDS
CAGCTTTCCAAATTGGTTCA+GGG 0.473552 3_1:-12299793 Msa0349100:CDS
GATTATTGATTGCCAAGAGT+TGG 0.474107 3_1:-12299442 Msa0349100:CDS
TCTTAAAACACAAAGTTTCA+AGG 0.474406 3_1:+12299592 None:intergenic
ACCTAAGAATAATAAACTAC+AGG 0.477102 3_1:-12298858 Msa0349100:CDS
CAGTCTGATGGTACAAGCCC+AGG 0.483116 3_1:-12300462 Msa0349100:CDS
CTTCTCAAACTCATAGCCCT+TGG 0.485090 3_1:+12300952 None:intergenic
CTTTCCATTTCAGGCTGTCA+CGG 0.488130 3_1:-12299675 Msa0349100:CDS
TGGTACAACTGCTTAAGTAA+TGG 0.488422 3_1:+12298718 None:intergenic
GATTTAGCGAAATCATTGTC+AGG 0.488689 3_1:-12300740 Msa0349100:CDS
ATGAATTGACAAAGTAGAAA+GGG 0.491779 3_1:+12298747 None:intergenic
CATTTAGCGAAATCATTGTC+AGG 0.492967 3_1:-12300617 Msa0349100:CDS
TAAGAACATGTCTGAATGGA+AGG 0.493200 3_1:-12299574 Msa0349100:CDS
ATACAAAGCTCTTGAAGCAA+AGG 0.494672 3_1:+12299528 None:intergenic
GTAATAATGCCATCATGGTC+TGG 0.498160 3_1:-12300797 Msa0349100:CDS
CATATTAAGAAGATGCCAAA+GGG 0.499270 3_1:-12300134 Msa0349100:CDS
AAATGTGGCGTGTCCTTTGA+GGG 0.501218 3_1:+12300552 None:intergenic
AAATGTGGCGTGTCCTTTGA+GGG 0.501218 3_1:+12300675 None:intergenic
ATGGAAAGCTTCTTGAGAGA+AGG 0.501844 3_1:+12299690 None:intergenic
ATACGATGAATGGAGAGAAA+TGG 0.502908 3_1:-12299910 Msa0349100:CDS
GACAAAGTAGAAAGGGAGAT+GGG 0.502936 3_1:+12298754 None:intergenic
CATGAATTGACAAAGTAGAA+AGG 0.503547 3_1:+12298746 None:intergenic
TTGAACCAGGAATCTTCTCT+AGG 0.503561 3_1:-12301361 Msa0349100:CDS
ACTTAAGCAGTTGTACCAAA+AGG 0.503834 3_1:-12298713 Msa0349100:CDS
AATTCTAGAGATACTAAATT+GGG 0.504357 3_1:+12299759 None:intergenic
TTTGCTGCCATAGCATCTGC+TGG 0.505809 3_1:+12299972 None:intergenic
TTTCTATTCGGAGGCTGCAT+AGG 0.506557 3_1:+12299043 None:intergenic
CTTAAAACACAAAGTTTCAA+GGG 0.507177 3_1:+12299593 None:intergenic
TTACGTCATCTTAATTTGAA+AGG 0.507496 3_1:-12300161 Msa0349100:CDS
ATTAGGTAAGCTTGTAATCT+CGG 0.507773 3_1:+12300277 None:intergenic
GCGAAGTGGTCGAGTGCAAA+AGG 0.509278 3_1:+12299138 None:intergenic
TTCTCAAACTCATAGCCCTT+GGG 0.510125 3_1:+12300953 None:intergenic
TTGTAATCTCGGTGTAAGAA+AGG 0.510686 3_1:+12300288 None:intergenic
TCTTTGGTCCAAATGTAGAA+TGG 0.511222 3_1:-12299233 Msa0349100:CDS
CTTTAGCTCTGAAGAGATTG+GGG 0.512370 3_1:-12301141 Msa0349100:CDS
CGAAGCACGTGTCTCCGTCT+TGG 0.512917 3_1:-12299874 Msa0349100:CDS
TCACTGATATTATCAGCCTT+GGG 0.513002 3_1:+12299408 None:intergenic
ATTTCCATCCAGATTGGAAA+GGG 0.519000 3_1:-12299346 Msa0349100:CDS
TATTCGGAGGCTGCATAGGT+TGG 0.519921 3_1:+12299047 None:intergenic
TATTGATTGCCAAGAGTTGG+AGG 0.522876 3_1:-12299439 Msa0349100:CDS
AATCAGTAATAATGCCATCA+TGG 0.524057 3_1:-12300802 Msa0349100:CDS
TGGAAAGCTTCTTGAGAGAA+GGG 0.525116 3_1:+12299691 None:intergenic
AGCACGTGTCTCCGTCTTGG+AGG 0.527938 3_1:-12299871 Msa0349100:CDS
GATCGAACATTGGAATATGC+TGG 0.529214 3_1:-12301401 Msa0349100:CDS
GTTCCCAGTTGCCACCACTT+GGG 0.532207 3_1:-12299719 Msa0349100:CDS
CAAGACGGAGACACGTGCTT+CGG 0.532384 3_1:+12299875 None:intergenic
CCTAAGAATAATAAACTACA+GGG 0.532823 3_1:-12298857 Msa0349100:CDS
TCAGATTGGAAGGGAGGCTA+AGG 0.536339 3_1:+12301005 None:intergenic
CGGCGCTTATCTTAAAGCGT+TGG 0.536341 3_1:+12300429 None:intergenic
TGGAGTTGATATTAAGCAGT+TGG 0.536704 3_1:-12300054 Msa0349100:CDS
GAGATTCAAGTGAAGTGAGG+TGG 0.541405 3_1:+12298827 None:intergenic
GATTGCAAGACGAGCTACAA+TGG 0.541929 3_1:-12301456 Msa0349100:CDS
ATCAAGCTTTGGATTGCAGA+AGG 0.542405 3_1:-12300920 Msa0349100:CDS
GATGGCTTCGAGTTACGAGT+GGG 0.543137 3_1:-12299007 Msa0349100:CDS
TTGCATTGTATGATTGTCCA+TGG 0.543323 3_1:-12299101 Msa0349100:CDS
AGAAAATAGTAGAAAAGTGT+GGG 0.543943 3_1:-12301171 Msa0349100:CDS
AAACAACGCTTCAGATTGGA+AGG 0.548628 3_1:+12300995 None:intergenic
GAGATGGGTAGACCCTCCTC+TGG 0.549620 3_1:+12298769 None:intergenic
GATGGCAAGATACTCTCCTC+TGG 0.551423 3_1:+12298916 None:intergenic
CAAGGGCTATGAGTTTGAGA+AGG 0.551706 3_1:-12300951 Msa0349100:CDS
CTTGAGAAGTTGCCAGAGGA+GGG 0.552166 3_1:-12298781 Msa0349100:CDS
TTGCCTTAAATGAAGTATCT+GGG 0.552429 3_1:+12301285 None:intergenic
TCTTGAGAAGTTGCCAGAGG+AGG 0.554584 3_1:-12298782 Msa0349100:CDS
TGTCACGGAATAGAGATCAT+TGG 0.555820 3_1:-12299660 Msa0349100:CDS
GCACTTTAACTATAACAGGT+TGG 0.556261 3_1:-12299176 Msa0349100:CDS
AGATACTGGAGACTGATTTG+TGG 0.556306 3_1:-12301078 Msa0349100:CDS
ATTGTATGATTGTCCATGGC+TGG 0.556973 3_1:-12299097 Msa0349100:CDS
TTGTTGAAGTGTAAGTATGA+GGG 0.557831 3_1:-12300896 Msa0349100:CDS
GGCTGATCCAGCAGATGCTA+TGG 0.560311 3_1:-12299979 Msa0349100:CDS
ACAAGGAAGGTGTTGAGGCA+GGG 0.560434 3_1:+12299479 None:intergenic
CTAGAACTAAAGAGATGTGA+TGG 0.564442 3_1:-12299384 Msa0349100:CDS
CGGAGGCTGCATAGGTTGGA+AGG 0.564765 3_1:+12299051 None:intergenic
AGCGTTGGTCACCATAACCC+TGG 0.565168 3_1:+12300444 None:intergenic
TGACAAAGTAGAAAGGGAGA+TGG 0.565659 3_1:+12298753 None:intergenic
ACATGTCTGAATGGAAGGAA+TGG 0.568138 3_1:-12299569 Msa0349100:CDS
TGCAAACAAGGAAGGTGTTG+AGG 0.570630 3_1:+12299474 None:intergenic
TAGGGCATCTTTCTATTCGG+AGG 0.574737 3_1:+12299034 None:intergenic
AATTTCAGGGTTGAAAAGTG+TGG 0.580093 3_1:-12300000 Msa0349100:CDS
GTTGGAGGCTTCAATTCCCA+AGG 0.581948 3_1:-12299424 Msa0349100:CDS
TTGCCCAAGTGGTGGCAACT+GGG 0.582967 3_1:+12299716 None:intergenic
AATTTCCATCCAGATTGGAA+AGG 0.585208 3_1:-12299347 Msa0349100:CDS
TTTGAAGCCTTCCTTTAAGG+TGG 0.587705 3_1:+12300021 None:intergenic
TTTGTTGTGGGAGAGCAGTG+TGG 0.590351 3_1:-12300074 Msa0349100:CDS
CAAGATACTCTCCTCTGGAA+AGG 0.595321 3_1:+12298921 None:intergenic
TGATTTGTGGCGTTTACCTG+AGG 0.596296 3_1:-12301065 Msa0349100:CDS
ATGACCCTTTCCAATCTGGA+TGG 0.598255 3_1:+12299342 None:intergenic
GCAAGACGAGCTACAATGGA+AGG 0.599091 3_1:-12301452 Msa0349100:CDS
AACTCGACCACCTTAAAGGA+AGG 0.603228 3_1:-12300028 Msa0349100:CDS
TCTGGCAACTTCTCAAGACA+AGG 0.603454 3_1:+12298787 None:intergenic
TTAATGTTGATGTCACCCTC+AGG 0.603483 3_1:+12301049 None:intergenic
CAAGGGACTGCACAGTCTGA+TGG 0.605721 3_1:-12300474 Msa0349100:CDS
TGAGTTTGCGAAAATTTGAT+GGG 0.608252 3_1:+12300189 None:intergenic
AATCAAGGCAGCACCAAATG+TGG 0.608485 3_1:+12300537 None:intergenic
AATCAAGGCAGCACCAAATG+TGG 0.608485 3_1:+12300660 None:intergenic
ATGATGTCTTGATCGAACAT+TGG 0.608838 3_1:-12301411 Msa0349100:CDS
GAGAATTAAGACTGGCGAAG+TGG 0.609018 3_1:+12299124 None:intergenic
AATTGGATGAGAGTGACAGT+TGG 0.609646 3_1:-12301264 Msa0349100:CDS
CAATGCAAGAGAATTAAGAC+TGG 0.611770 3_1:+12299116 None:intergenic
TGATGGCTTCGAGTTACGAG+TGG 0.612320 3_1:-12299008 Msa0349100:CDS
GCGTTGGTCACCATAACCCT+GGG 0.612573 3_1:+12300445 None:intergenic
GAATCCCGTTTAAGAATAGA+GGG 0.615091 3_1:-12300716 Msa0349100:CDS
AATCTTAGATTCCTTTCCAG+AGG 0.615351 3_1:-12298932 Msa0349100:CDS
AAGAAAATAGTAGAAAAGTG+TGG 0.616619 3_1:-12301172 Msa0349100:CDS
CATTGATGGTGAGCCTCATG+AGG 0.619266 3_1:+12299829 None:intergenic
ATAGAGATTCAAGTGAAGTG+AGG 0.619293 3_1:+12298824 None:intergenic
AACGCTTCAGATTGGAAGGG+AGG 0.619449 3_1:+12300999 None:intergenic
CAGTTGTACCAAAAGGAGCA+AGG 0.623369 3_1:-12298706 Msa0349100:CDS
CAATGACCTGTGTTCCACAA+AGG 0.626105 3_1:+12299319 None:intergenic
AAGGGCTATGAGTTTGAGAA+GGG 0.628230 3_1:-12300950 Msa0349100:CDS
GAAGGGAATTGCCCAAGTGG+TGG 0.628475 3_1:+12299708 None:intergenic
AAGGTAACTCATTCTCAGAA+CGG 0.629592 3_1:+12301024 None:intergenic
GGTCATCCTTTGTGGAACAC+AGG 0.629801 3_1:-12299325 Msa0349100:CDS
AGATGCCAAAGGGGATAAGA+GGG 0.632272 3_1:-12300124 Msa0349100:CDS
AGTATCGCATCAGGAAGACA+TGG 0.635764 3_1:-12301494 Msa0349100:CDS
GATGAATGGAGAGAAATGGA+TGG 0.636562 3_1:-12299906 Msa0349100:CDS
AGAGAAGGGAATTGCCCAAG+TGG 0.638783 3_1:+12299705 None:intergenic
ATGTGCAAGATATCCCTCAA+AGG 0.639316 3_1:-12300565 Msa0349100:CDS
ATGTGCAAGATATCCCTCAA+AGG 0.639316 3_1:-12300688 Msa0349100:CDS
TTGGATGAGAGTGACAGTTG+GGG 0.643793 3_1:-12301262 Msa0349100:CDS
AGTCTGATGGTACAAGCCCA+GGG 0.645889 3_1:-12300461 Msa0349100:CDS
ACATATTAAGAAGATGCCAA+AGG 0.649209 3_1:-12300135 Msa0349100:CDS
CAAGATAATTGTGACAACAC+AGG 0.650118 3_1:-12301338 Msa0349100:CDS
AAAATAGTAGAAAAGTGTGG+GGG 0.652058 3_1:-12301169 Msa0349100:CDS
GATTTGTGGCGTTTACCTGA+GGG 0.656849 3_1:-12301064 Msa0349100:CDS
ATGGCTTCGAGTTACGAGTG+GGG 0.659222 3_1:-12299006 Msa0349100:CDS
TAGTACTTACCAGACCATGA+TGG 0.660513 3_1:+12300788 None:intergenic
AAACAAATTAAGCTGCACAT+CGG 0.662115 3_1:+12300409 None:intergenic
TTGTCTTGAGAAGTTGCCAG+AGG 0.663144 3_1:-12298785 Msa0349100:CDS
GTCGAGTGCAAAAGGCAATG+AGG 0.667708 3_1:+12299146 None:intergenic
AAAAGGAGCAAGGAGAGCGG+TGG 0.670875 3_1:-12298696 Msa0349100:CDS
AAATAGTAGAAAAGTGTGGG+GGG 0.673548 3_1:-12301168 Msa0349100:CDS
CTGGCAACTTCTCAAGACAA+GGG 0.677922 3_1:+12298788 None:intergenic
GAAAATAGTAGAAAAGTGTG+GGG 0.680821 3_1:-12301170 Msa0349100:CDS
AACCAAATAGAAACCTCATG+AGG 0.681369 3_1:-12299842 Msa0349100:CDS
CCTTAAATGAAGTATCTGGG+TGG 0.695755 3_1:+12301288 None:intergenic
AACAACGCTTCAGATTGGAA+GGG 0.699815 3_1:+12300996 None:intergenic
ACCAAAAGGAGCAAGGAGAG+CGG 0.701767 3_1:-12298699 Msa0349100:CDS
TGGTTGAAGAGCCTCCAAGA+CGG 0.704961 3_1:+12299860 None:intergenic
CTAAGAATAATAAACTACAG+GGG 0.726102 3_1:-12298856 Msa0349100:CDS
ATATTAAGAAGATGCCAAAG+GGG 0.729497 3_1:-12300133 Msa0349100:CDS
ACGACGACAAATATCCAGAG+AGG 0.741396 3_1:+12299209 None:intergenic
CTCACCATCAATGACTACAG+AGG 0.747770 3_1:-12299819 Msa0349100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAGACTAAAATTTTTA+CGG - chr3_1:12299780-12299799 Msa0349100:CDS 10.0%
!!! AATTCTAGAGATACTAAATT+GGG + chr3_1:12300412-12300431 None:intergenic 20.0%
!!! GTTAAATAGAATTTTCTCTA+GGG + chr3_1:12300881-12300900 None:intergenic 20.0%
!!! TGTTAAATAGAATTTTCTCT+AGG + chr3_1:12300882-12300901 None:intergenic 20.0%
!! ACACTTTTCTACTATTTTCT+TGG + chr3_1:12298997-12299016 None:intergenic 25.0%
! AAGAAAATAGTAGAAAAGTG+TGG - chr3_1:12298996-12299015 Msa0349100:CDS 25.0%
!! AGAAAATAGTAGAAAAGTGT+GGG - chr3_1:12298997-12299016 Msa0349100:CDS 25.0%
!! TTTTTGTTCTATATTTCCCA+AGG - chr3_1:12299199-12299218 Msa0349100:CDS 25.0%
!! TTTTGTTCTATATTTCCCAA+GGG - chr3_1:12299200-12299219 Msa0349100:CDS 25.0%
! TATCACTCTCTATTCTTAAA+CGG + chr3_1:12299583-12299602 None:intergenic 25.0%
! AGAGCATGTTAAAAAAATCA+AGG - chr3_1:12299676-12299695 Msa0349100:CDS 25.0%
! GAGCATGTTAAAAAAATCAA+GGG - chr3_1:12299677-12299696 Msa0349100:CDS 25.0%
!! TTACGTCATCTTAATTTGAA+AGG - chr3_1:12300007-12300026 Msa0349100:CDS 25.0%
!! CAATTCTAGAGATACTAAAT+TGG + chr3_1:12300413-12300432 None:intergenic 25.0%
!!! TTTAGTATCTCTAGAATTGT+TGG - chr3_1:12300414-12300433 Msa0349100:CDS 25.0%
!!! TTAGTATCTCTAGAATTGTT+GGG - chr3_1:12300415-12300434 Msa0349100:CDS 25.0%
! CTTAAAACACAAAGTTTCAA+GGG + chr3_1:12300578-12300597 None:intergenic 25.0%
! TCTTAAAACACAAAGTTTCA+AGG + chr3_1:12300579-12300598 None:intergenic 25.0%
!! ACTTCCAATTCTTTAAGAAA+TGG + chr3_1:12300907-12300926 None:intergenic 25.0%
! TCAAGAGATTTAATAGTTGA+TGG + chr3_1:12301273-12301292 None:intergenic 25.0%
! GTAGTTTATTATTCTTAGGT+TGG + chr3_1:12301310-12301329 None:intergenic 25.0%
! ACCTAAGAATAATAAACTAC+AGG - chr3_1:12301310-12301329 Msa0349100:CDS 25.0%
! CCTAAGAATAATAAACTACA+GGG - chr3_1:12301311-12301330 Msa0349100:CDS 25.0%
! CTAAGAATAATAAACTACAG+GGG - chr3_1:12301312-12301331 Msa0349100:CDS 25.0%
! ATGAATTGACAAAGTAGAAA+GGG + chr3_1:12301424-12301443 None:intergenic 25.0%
! TTTACTACTTCTTTTGAACC+AGG - chr3_1:12298794-12298813 Msa0349100:CDS 30.0%
! TTGCCTTAAATGAAGTATCT+GGG + chr3_1:12298886-12298905 None:intergenic 30.0%
! ATTGCCTTAAATGAAGTATC+TGG + chr3_1:12298887-12298906 None:intergenic 30.0%
! GATACTTCATTTAAGGCAAT+TGG - chr3_1:12298887-12298906 Msa0349100:CDS 30.0%
TTGGCTATCAATTCAAGATT+TGG + chr3_1:12298978-12298997 None:intergenic 30.0%
! GAAAATAGTAGAAAAGTGTG+GGG - chr3_1:12298998-12299017 Msa0349100:CDS 30.0%
! AAAATAGTAGAAAAGTGTGG+GGG - chr3_1:12298999-12299018 Msa0349100:CDS 30.0%
TAAAATTCTCTGAACCTGAA+TGG - chr3_1:12299063-12299082 Msa0349100:CDS 30.0%
AAAATTCTCTGAACCTGAAT+GGG - chr3_1:12299064-12299083 Msa0349100:CDS 30.0%
TTTGTTGAAGTGTAAGTATG+AGG - chr3_1:12299271-12299290 Msa0349100:CDS 30.0%
TTGTTGAAGTGTAAGTATGA+GGG - chr3_1:12299272-12299291 Msa0349100:CDS 30.0%
! ATGGCATTATTACTGATTGT+TGG + chr3_1:12299364-12299383 None:intergenic 30.0%
AATCAGTAATAATGCCATCA+TGG - chr3_1:12299366-12299385 Msa0349100:CDS 30.0%
TATCACCCTCTATTCTTAAA+CGG + chr3_1:12299460-12299479 None:intergenic 30.0%
ATCACTCTCTATTCTTAAAC+GGG + chr3_1:12299582-12299601 None:intergenic 30.0%
AAACAAATTAAGCTGCACAT+CGG + chr3_1:12299762-12299781 None:intergenic 30.0%
ATTAGGTAAGCTTGTAATCT+CGG + chr3_1:12299894-12299913 None:intergenic 30.0%
ATGAGCATACAAATGGAATT+AGG + chr3_1:12299911-12299930 None:intergenic 30.0%
CAAATCAATGAGCATACAAA+TGG + chr3_1:12299918-12299937 None:intergenic 30.0%
TGAGTTTGCGAAAATTTGAT+GGG + chr3_1:12299982-12300001 None:intergenic 30.0%
ATGAGTTTGCGAAAATTTGA+TGG + chr3_1:12299983-12300002 None:intergenic 30.0%
ACATATTAAGAAGATGCCAA+AGG - chr3_1:12300033-12300052 Msa0349100:CDS 30.0%
CATATTAAGAAGATGCCAAA+GGG - chr3_1:12300034-12300053 Msa0349100:CDS 30.0%
ATATTAAGAAGATGCCAAAG+GGG - chr3_1:12300035-12300054 Msa0349100:CDS 30.0%
! AAATTTGAAGCCTTCCTTTA+AGG + chr3_1:12300153-12300172 None:intergenic 30.0%
TATGTATGTCATACGATGAA+TGG - chr3_1:12300248-12300267 Msa0349100:CDS 30.0%
AAAGTTTCAAGGGATCTAAA+TGG + chr3_1:12300568-12300587 None:intergenic 30.0%
!!! GTTTTAAGAACATGTCTGAA+TGG - chr3_1:12300590-12300609 Msa0349100:CDS 30.0%
AAATGAATTTCCATCCAGAT+TGG - chr3_1:12300816-12300835 Msa0349100:CDS 30.0%
!! AAATAGAATTTTCTCTAGGG+TGG + chr3_1:12300878-12300897 None:intergenic 30.0%
CAGTCCATTTCTTAAAGAAT+TGG - chr3_1:12300900-12300919 Msa0349100:CDS 30.0%
! AATTAGGGCATCTTTCTATT+CGG + chr3_1:12301140-12301159 None:intergenic 30.0%
CCCTGTAGTTTATTATTCTT+AGG + chr3_1:12301314-12301333 None:intergenic 30.0%
CATGAATTGACAAAGTAGAA+AGG + chr3_1:12301425-12301444 None:intergenic 30.0%
!! ATCTTTAGAAGTATCGCATC+AGG - chr3_1:12298665-12298684 Msa0349100:CDS 35.0%
ATGATGTCTTGATCGAACAT+TGG - chr3_1:12298757-12298776 Msa0349100:CDS 35.0%
CAAGATAATTGTGACAACAC+AGG - chr3_1:12298830-12298849 Msa0349100:CDS 35.0%
!! TTTGTGAGATTTGCTTTTCG+AGG - chr3_1:12298933-12298952 Msa0349100:CDS 35.0%
! AAATAGTAGAAAAGTGTGGG+GGG - chr3_1:12299000-12299019 Msa0349100:CDS 35.0%
AAGGTAACTCATTCTCAGAA+CGG + chr3_1:12299147-12299166 None:intergenic 35.0%
AGGGTGAATTAATCAAGCTT+TGG - chr3_1:12299237-12299256 Msa0349100:CDS 35.0%
ATTCGAAACGAAGAAGAGTT+AGG - chr3_1:12299299-12299318 Msa0349100:CDS 35.0%
GATTTAGCGAAATCATTGTC+AGG - chr3_1:12299428-12299447 Msa0349100:CDS 35.0%
AGAATCCCGTTTAAGAATAG+AGG - chr3_1:12299451-12299470 Msa0349100:CDS 35.0%
GAATCCCGTTTAAGAATAGA+GGG - chr3_1:12299452-12299471 Msa0349100:CDS 35.0%
ATCACCCTCTATTCTTAAAC+GGG + chr3_1:12299459-12299478 None:intergenic 35.0%
TATCACCATCTTCCAAATCA+AGG + chr3_1:12299526-12299545 None:intergenic 35.0%
CATTTAGCGAAATCATTGTC+AGG - chr3_1:12299551-12299570 Msa0349100:CDS 35.0%
TATCACCATCTTCCAAATCA+AGG + chr3_1:12299526-12299545 None:intergenic 35.0%
TTACGGATGTTGTCTTTCAA+TGG - chr3_1:12299797-12299816 Msa0349100:CDS 35.0%
! TTGTAATCTCGGTGTAAGAA+AGG + chr3_1:12299883-12299902 None:intergenic 35.0%
!! ATGCTGACTGATTTTGTTGT+GGG - chr3_1:12300082-12300101 Msa0349100:CDS 35.0%
!! TGGAGTTGATATTAAGCAGT+TGG - chr3_1:12300114-12300133 Msa0349100:CDS 35.0%
AAAGGAAGGCTTCAAATTTC+AGG - chr3_1:12300154-12300173 Msa0349100:CDS 35.0%
AAGGAAGGCTTCAAATTTCA+GGG - chr3_1:12300155-12300174 Msa0349100:CDS 35.0%
AATTTCAGGGTTGAAAAGTG+TGG - chr3_1:12300168-12300187 Msa0349100:CDS 35.0%
ATACGATGAATGGAGAGAAA+TGG - chr3_1:12300258-12300277 Msa0349100:CDS 35.0%
AACCAAATAGAAACCTCATG+AGG - chr3_1:12300326-12300345 Msa0349100:CDS 35.0%
!!! ATCATTGGTTCAGAGTTTTG+CGG - chr3_1:12300523-12300542 Msa0349100:CDS 35.0%
TAAGAACATGTCTGAATGGA+AGG - chr3_1:12300594-12300613 Msa0349100:CDS 35.0%
AAGGAATGGTTATGTCTTGA+AGG - chr3_1:12300613-12300632 Msa0349100:CDS 35.0%
TACAAAGCTCTTGAAGCAAA+GGG + chr3_1:12300642-12300661 None:intergenic 35.0%
ATACAAAGCTCTTGAAGCAA+AGG + chr3_1:12300643-12300662 None:intergenic 35.0%
! ATCTCCAACTTTTGCAAACA+AGG + chr3_1:12300709-12300728 None:intergenic 35.0%
! GATTATTGATTGCCAAGAGT+TGG - chr3_1:12300726-12300745 Msa0349100:CDS 35.0%
TCACTGATATTATCAGCCTT+GGG + chr3_1:12300763-12300782 None:intergenic 35.0%
CTAGAACTAAAGAGATGTGA+TGG - chr3_1:12300784-12300803 Msa0349100:CDS 35.0%
AATTTCCATCCAGATTGGAA+AGG - chr3_1:12300821-12300840 Msa0349100:CDS 35.0%
ATTTCCATCCAGATTGGAAA+GGG - chr3_1:12300822-12300841 Msa0349100:CDS 35.0%
TTGGAAGTTGAAGACTTCTT+TGG - chr3_1:12300919-12300938 Msa0349100:CDS 35.0%
TCTTTGGTCCAAATGTAGAA+TGG - chr3_1:12300935-12300954 Msa0349100:CDS 35.0%
CTTCGCACTTTAACTATAAC+AGG - chr3_1:12300988-12301007 Msa0349100:CDS 35.0%
GCACTTTAACTATAACAGGT+TGG - chr3_1:12300992-12301011 Msa0349100:CDS 35.0%
CAATGCAAGAGAATTAAGAC+TGG + chr3_1:12301055-12301074 None:intergenic 35.0%
TTGCATTGTATGATTGTCCA+TGG - chr3_1:12301067-12301086 Msa0349100:CDS 35.0%
AGAAAGATGCCCTAATTTGA+TGG - chr3_1:12301143-12301162 Msa0349100:CDS 35.0%
AACTCGAAGCCATCAAATTA+GGG + chr3_1:12301155-12301174 None:intergenic 35.0%
TAACTCGAAGCCATCAAATT+AGG + chr3_1:12301156-12301175 None:intergenic 35.0%
AATCTTAGATTCCTTTCCAG+AGG - chr3_1:12301236-12301255 Msa0349100:CDS 35.0%
ATAGAGATTCAAGTGAAGTG+AGG + chr3_1:12301347-12301366 None:intergenic 35.0%
TGGTACAACTGCTTAAGTAA+TGG + chr3_1:12301453-12301472 None:intergenic 35.0%
ACTTAAGCAGTTGTACCAAA+AGG - chr3_1:12301455-12301474 Msa0349100:CDS 35.0%
GATCGAACATTGGAATATGC+TGG - chr3_1:12298767-12298786 Msa0349100:CDS 40.0%
TTGAACCAGGAATCTTCTCT+AGG - chr3_1:12298807-12298826 Msa0349100:CDS 40.0%
! CCTTAAATGAAGTATCTGGG+TGG + chr3_1:12298883-12298902 None:intergenic 40.0%
CCACCCAGATACTTCATTTA+AGG - chr3_1:12298880-12298899 Msa0349100:CDS 40.0%
AATTGGATGAGAGTGACAGT+TGG - chr3_1:12298904-12298923 Msa0349100:CDS 40.0%
ATTGGATGAGAGTGACAGTT+GGG - chr3_1:12298905-12298924 Msa0349100:CDS 40.0%
!! TGAGATTTGCTTTTCGAGGT+AGG - chr3_1:12298937-12298956 Msa0349100:CDS 40.0%
!! TCCTTTAGCTCTGAAGAGAT+TGG - chr3_1:12299025-12299044 Msa0349100:CDS 40.0%
!! CCTTTAGCTCTGAAGAGATT+GGG - chr3_1:12299026-12299045 Msa0349100:CDS 40.0%
!! CTTTAGCTCTGAAGAGATTG+GGG - chr3_1:12299027-12299046 Msa0349100:CDS 40.0%
!! ACCTGAATGGGTTAAGATAC+TGG - chr3_1:12299076-12299095 Msa0349100:CDS 40.0%
TCCAGTATCTTAACCCATTC+AGG + chr3_1:12299080-12299099 None:intergenic 40.0%
!! AGATACTGGAGACTGATTTG+TGG - chr3_1:12299090-12299109 Msa0349100:CDS 40.0%
TTAATGTTGATGTCACCCTC+AGG + chr3_1:12299122-12299141 None:intergenic 40.0%
AACAACGCTTCAGATTGGAA+GGG + chr3_1:12299175-12299194 None:intergenic 40.0%
AAACAACGCTTCAGATTGGA+AGG + chr3_1:12299176-12299195 None:intergenic 40.0%
AGCAAAACAACGCTTCAGAT+TGG + chr3_1:12299180-12299199 None:intergenic 40.0%
TTCTCAAACTCATAGCCCTT+GGG + chr3_1:12299218-12299237 None:intergenic 40.0%
AAGGGCTATGAGTTTGAGAA+GGG - chr3_1:12299218-12299237 Msa0349100:CDS 40.0%
!! ATCAAGCTTTGGATTGCAGA+AGG - chr3_1:12299248-12299267 Msa0349100:CDS 40.0%
GTAATAATGCCATCATGGTC+TGG - chr3_1:12299371-12299390 Msa0349100:CDS 40.0%
TAGTACTTACCAGACCATGA+TGG + chr3_1:12299383-12299402 None:intergenic 40.0%
ATGTGCAAGATATCCCTCAA+AGG - chr3_1:12299480-12299499 Msa0349100:CDS 40.0%
ATGTGCAAGATATCCCTCAA+AGG - chr3_1:12299480-12299499 Msa0349100:CDS 40.0%
ATTAACCCTCTTATCCCCTT+TGG + chr3_1:12300052-12300071 None:intergenic 40.0%
!! GATGCTGACTGATTTTGTTG+TGG - chr3_1:12300081-12300100 Msa0349100:CDS 40.0%
! TTTGAAGCCTTCCTTTAAGG+TGG + chr3_1:12300150-12300169 None:intergenic 40.0%
GATGAATGGAGAGAAATGGA+TGG - chr3_1:12300262-12300281 Msa0349100:CDS 40.0%
AGCCTCATGAGGTTTCTATT+TGG + chr3_1:12300331-12300350 None:intergenic 40.0%
! CAGCTTTCCAAATTGGTTCA+GGG - chr3_1:12300375-12300394 Msa0349100:CDS 40.0%
TGATGATCCCTGAACCAATT+TGG + chr3_1:12300385-12300404 None:intergenic 40.0%
TGGAAAGCTTCTTGAGAGAA+GGG + chr3_1:12300480-12300499 None:intergenic 40.0%
ATGGAAAGCTTCTTGAGAGA+AGG + chr3_1:12300481-12300500 None:intergenic 40.0%
CTCAAGAAGCTTTCCATTTC+AGG - chr3_1:12300484-12300503 Msa0349100:CDS 40.0%
TGTCACGGAATAGAGATCAT+TGG - chr3_1:12300508-12300527 Msa0349100:CDS 40.0%
ACATGTCTGAATGGAAGGAA+TGG - chr3_1:12300599-12300618 Msa0349100:CDS 40.0%
! CCAACTTTTGCAAACAAGGA+AGG + chr3_1:12300705-12300724 None:intergenic 40.0%
! CCTTCCTTGTTTGCAAAAGT+TGG - chr3_1:12300702-12300721 Msa0349100:CDS 40.0%
! TATTGATTGCCAAGAGTTGG+AGG - chr3_1:12300729-12300748 Msa0349100:CDS 40.0%
CTCACTGATATTATCAGCCT+TGG + chr3_1:12300764-12300783 None:intergenic 40.0%
AGAGAGGACCATTCTACATT+TGG + chr3_1:12300946-12300965 None:intergenic 40.0%
AAATGTAGAATGGTCCTCTC+TGG - chr3_1:12300945-12300964 Msa0349100:CDS 40.0%
ATTGTATGATTGTCCATGGC+TGG - chr3_1:12301071-12301090 Msa0349100:CDS 40.0%
!!! CATGGCTGGAATCGTTTTTT+GGG - chr3_1:12301085-12301104 Msa0349100:CDS 40.0%
GACAAAGTAGAAAGGGAGAT+GGG + chr3_1:12301417-12301436 None:intergenic 40.0%
TGACAAAGTAGAAAGGGAGA+TGG + chr3_1:12301418-12301437 None:intergenic 40.0%
AGTATCGCATCAGGAAGACA+TGG - chr3_1:12298674-12298693 Msa0349100:CDS 45.0%
GATTGCAAGACGAGCTACAA+TGG - chr3_1:12298712-12298731 Msa0349100:CDS 45.0%
TCTTGCCTAGAGAAGATTCC+TGG + chr3_1:12298815-12298834 None:intergenic 45.0%
TTGGATGAGAGTGACAGTTG+GGG - chr3_1:12298906-12298925 Msa0349100:CDS 45.0%
CCCAATCTCTTCAGAGCTAA+AGG + chr3_1:12299029-12299048 None:intergenic 45.0%
! TGATTTGTGGCGTTTACCTG+AGG - chr3_1:12299103-12299122 Msa0349100:CDS 45.0%
GATTTGTGGCGTTTACCTGA+GGG - chr3_1:12299104-12299123 Msa0349100:CDS 45.0%
CTTCTCAAACTCATAGCCCT+TGG + chr3_1:12299219-12299238 None:intergenic 45.0%
CAAGGGCTATGAGTTTGAGA+AGG - chr3_1:12299217-12299236 Msa0349100:CDS 45.0%
AAATGTGGCGTGTCCTTTGA+GGG + chr3_1:12299496-12299515 None:intergenic 45.0%
AATCAAGGCAGCACCAAATG+TGG + chr3_1:12299511-12299530 None:intergenic 45.0%
!! CATTTGGTGCTGCCTTGATT+TGG - chr3_1:12299511-12299530 Msa0349100:CDS 45.0%
!! TGCTGCCTTGATTTGGAAGA+TGG - chr3_1:12299518-12299537 Msa0349100:CDS 45.0%
AAATGTGGCGTGTCCTTTGA+GGG + chr3_1:12299496-12299515 None:intergenic 45.0%
AATCAAGGCAGCACCAAATG+TGG + chr3_1:12299511-12299530 None:intergenic 45.0%
!! CATTTGGTGCTGCCTTGATT+TGG - chr3_1:12299511-12299530 Msa0349100:CDS 45.0%
!! TGCTGCCTTGATTTGGAAGA+TGG - chr3_1:12299518-12299537 Msa0349100:CDS 45.0%
AAGATGCCAAAGGGGATAAG+AGG - chr3_1:12300043-12300062 Msa0349100:CDS 45.0%
AGATGCCAAAGGGGATAAGA+GGG - chr3_1:12300044-12300063 Msa0349100:CDS 45.0%
AACTCGACCACCTTAAAGGA+AGG - chr3_1:12300140-12300159 Msa0349100:CDS 45.0%
CTCACCATCAATGACTACAG+AGG - chr3_1:12300349-12300368 Msa0349100:CDS 45.0%
GCTACCTCTGTAGTCATTGA+TGG + chr3_1:12300356-12300375 None:intergenic 45.0%
GAGGTAGCAGCTTTCCAAAT+TGG - chr3_1:12300368-12300387 Msa0349100:CDS 45.0%
! GCAGCTTTCCAAATTGGTTC+AGG - chr3_1:12300374-12300393 Msa0349100:CDS 45.0%
CTTTCCATTTCAGGCTGTCA+CGG - chr3_1:12300493-12300512 Msa0349100:CDS 45.0%
TATTCCGTGACAGCCTGAAA+TGG + chr3_1:12300500-12300519 None:intergenic 45.0%
!!! GGCAGGGCACTTTTTAACTT+GGG + chr3_1:12300676-12300695 None:intergenic 45.0%
!! AGGCAGGGCACTTTTTAACT+TGG + chr3_1:12300677-12300696 None:intergenic 45.0%
!! TGCAAACAAGGAAGGTGTTG+AGG + chr3_1:12300697-12300716 None:intergenic 45.0%
GAATTGAAGCCTCCAACTCT+TGG + chr3_1:12300741-12300760 None:intergenic 45.0%
ATGACCCTTTCCAATCTGGA+TGG + chr3_1:12300829-12300848 None:intergenic 45.0%
AAGGATGACCCTTTCCAATC+TGG + chr3_1:12300833-12300852 None:intergenic 45.0%
TTGGAAAGGGTCATCCTTTG+TGG - chr3_1:12300835-12300854 Msa0349100:CDS 45.0%
CAATGACCTGTGTTCCACAA+AGG + chr3_1:12300852-12300871 None:intergenic 45.0%
ACGACGACAAATATCCAGAG+AGG + chr3_1:12300962-12300981 None:intergenic 45.0%
GAGAATTAAGACTGGCGAAG+TGG + chr3_1:12301047-12301066 None:intergenic 45.0%
CCAAAAAACGATTCCAGCCA+TGG + chr3_1:12301087-12301106 None:intergenic 45.0%
!!! CCATGGCTGGAATCGTTTTT+TGG - chr3_1:12301084-12301103 Msa0349100:CDS 45.0%
TTTCTATTCGGAGGCTGCAT+AGG + chr3_1:12301128-12301147 None:intergenic 45.0%
! TAGGGCATCTTTCTATTCGG+AGG + chr3_1:12301137-12301156 None:intergenic 45.0%
! CAAGATACTCTCCTCTGGAA+AGG + chr3_1:12301250-12301269 None:intergenic 45.0%
GAGATTCAAGTGAAGTGAGG+TGG + chr3_1:12301344-12301363 None:intergenic 45.0%
CTGGCAACTTCTCAAGACAA+GGG + chr3_1:12301383-12301402 None:intergenic 45.0%
TCTGGCAACTTCTCAAGACA+AGG + chr3_1:12301384-12301403 None:intergenic 45.0%
TTGTCTTGAGAAGTTGCCAG+AGG - chr3_1:12301383-12301402 Msa0349100:CDS 45.0%
CAGTTGTACCAAAAGGAGCA+AGG - chr3_1:12301462-12301481 Msa0349100:CDS 45.0%
GCAAGACGAGCTACAATGGA+AGG - chr3_1:12298716-12298735 Msa0349100:CDS 50.0%
TCAGATTGGAAGGGAGGCTA+AGG + chr3_1:12299166-12299185 None:intergenic 50.0%
AACGCTTCAGATTGGAAGGG+AGG + chr3_1:12299172-12299191 None:intergenic 50.0%
CAAATGTGGCGTGTCCTTTG+AGG + chr3_1:12299497-12299516 None:intergenic 50.0%
CTCAAAGGACACGCCACATT+TGG - chr3_1:12299495-12299514 Msa0349100:CDS 50.0%
CAAATGTGGCGTGTCCTTTG+AGG + chr3_1:12299497-12299516 None:intergenic 50.0%
CTCAAAGGACACGCCACATT+TGG - chr3_1:12299495-12299514 Msa0349100:CDS 50.0%
AGTCTGATGGTACAAGCCCA+GGG - chr3_1:12299707-12299726 Msa0349100:CDS 50.0%
ATGGTACAAGCCCAGGGTTA+TGG - chr3_1:12299713-12299732 Msa0349100:CDS 50.0%
CGGCGCTTATCTTAAAGCGT+TGG + chr3_1:12299742-12299761 None:intergenic 50.0%
! TTTGTTGTGGGAGAGCAGTG+TGG - chr3_1:12300094-12300113 Msa0349100:CDS 50.0%
GCAGAACTCGACCACCTTAA+AGG - chr3_1:12300136-12300155 Msa0349100:CDS 50.0%
TTTGCTGCCATAGCATCTGC+TGG + chr3_1:12300199-12300218 None:intergenic 50.0%
TGGTTGAAGAGCCTCCAAGA+CGG + chr3_1:12300311-12300330 None:intergenic 50.0%
!! CATTGATGGTGAGCCTCATG+AGG + chr3_1:12300342-12300361 None:intergenic 50.0%
AGAGAAGGGAATTGCCCAAG+TGG + chr3_1:12300466-12300485 None:intergenic 50.0%
!! ACAAGGAAGGTGTTGAGGCA+GGG + chr3_1:12300692-12300711 None:intergenic 50.0%
!! AACAAGGAAGGTGTTGAGGC+AGG + chr3_1:12300693-12300712 None:intergenic 50.0%
GTTGGAGGCTTCAATTCCCA+AGG - chr3_1:12300744-12300763 Msa0349100:CDS 50.0%
GGTCATCCTTTGTGGAACAC+AGG - chr3_1:12300843-12300862 Msa0349100:CDS 50.0%
GTCGAGTGCAAAAGGCAATG+AGG + chr3_1:12301025-12301044 None:intergenic 50.0%
!!! GGCTGGAATCGTTTTTTGGG+AGG - chr3_1:12301088-12301107 Msa0349100:CDS 50.0%
TATTCGGAGGCTGCATAGGT+TGG + chr3_1:12301124-12301143 None:intergenic 50.0%
! TGATGGCTTCGAGTTACGAG+TGG - chr3_1:12301160-12301179 Msa0349100:CDS 50.0%
! GATGGCTTCGAGTTACGAGT+GGG - chr3_1:12301161-12301180 Msa0349100:CDS 50.0%
! ATGGCTTCGAGTTACGAGTG+GGG - chr3_1:12301162-12301181 Msa0349100:CDS 50.0%
GATGGCAAGATACTCTCCTC+TGG + chr3_1:12301255-12301274 None:intergenic 50.0%
TCTTGAGAAGTTGCCAGAGG+AGG - chr3_1:12301386-12301405 Msa0349100:CDS 50.0%
CTTGAGAAGTTGCCAGAGGA+GGG - chr3_1:12301387-12301406 Msa0349100:CDS 50.0%
ACCAAAAGGAGCAAGGAGAG+CGG - chr3_1:12301469-12301488 Msa0349100:CDS 50.0%
CAAGGGACTGCACAGTCTGA+TGG - chr3_1:12299694-12299713 Msa0349100:CDS 55.0%
CAGTCTGATGGTACAAGCCC+AGG - chr3_1:12299706-12299725 Msa0349100:CDS 55.0%
! GCGTTGGTCACCATAACCCT+GGG + chr3_1:12299726-12299745 None:intergenic 55.0%
!! AGCGTTGGTCACCATAACCC+TGG + chr3_1:12299727-12299746 None:intergenic 55.0%
GGCTGATCCAGCAGATGCTA+TGG - chr3_1:12300189-12300208 Msa0349100:CDS 55.0%
CAAGACGGAGACACGTGCTT+CGG + chr3_1:12300296-12300315 None:intergenic 55.0%
TGTTCCCAGTTGCCACCACT+TGG - chr3_1:12300448-12300467 Msa0349100:CDS 55.0%
GTTCCCAGTTGCCACCACTT+GGG - chr3_1:12300449-12300468 Msa0349100:CDS 55.0%
TTGCCCAAGTGGTGGCAACT+GGG + chr3_1:12300455-12300474 None:intergenic 55.0%
ATTGCCCAAGTGGTGGCAAC+TGG + chr3_1:12300456-12300475 None:intergenic 55.0%
GAAGGGAATTGCCCAAGTGG+TGG + chr3_1:12300463-12300482 None:intergenic 55.0%
GCGAAGTGGTCGAGTGCAAA+AGG + chr3_1:12301033-12301052 None:intergenic 55.0%
! ACCGCTCTCCTTGCTCCTTT+TGG + chr3_1:12301473-12301492 None:intergenic 55.0%
AAAAGGAGCAAGGAGAGCGG+TGG - chr3_1:12301472-12301491 Msa0349100:CDS 55.0%
CGAAGCACGTGTCTCCGTCT+TGG - chr3_1:12300294-12300313 Msa0349100:CDS 60.0%
AGCACGTGTCTCCGTCTTGG+AGG - chr3_1:12300297-12300316 Msa0349100:CDS 60.0%
! CGGAGGCTGCATAGGTTGGA+AGG + chr3_1:12301120-12301139 None:intergenic 60.0%
GAGATGGGTAGACCCTCCTC+TGG + chr3_1:12301402-12301421 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 12298657 12301533 12298657 ID=Msa0349100;Name=Msa0349100
chr3_1 mRNA 12298657 12301533 12298657 ID=Msa0349100-mRNA-1;Parent=Msa0349100;Name=Msa0349100-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|958
chr3_1 exon 12298657 12301533 12298657 ID=Msa0349100-mRNA-1:exon:3223;Parent=Msa0349100-mRNA-1
chr3_1 CDS 12298657 12301533 12298657 ID=Msa0349100-mRNA-1:cds;Parent=Msa0349100-mRNA-1
Gene Sequence

>Msa0349100

ATGTCAATATCTTTAGAAGTATCGCATCAGGAAGACATGGAAATACTTCAACGTCGATTGCAAGACGAGCTACAATGGAAGGTATATTTGCTTGTTCTAGATGATGTCTTGATCGAACATTGGAATATGCTGGAGCATTTACTACTTCTTTTGAACCAGGAATCTTCTCTAGGCAAGATAATTGTGACAACACAGGATAAAGAAGTTGCATCAGTCATGAGATCCACCCAGATACTTCATTTAAGGCAATTGGATGAGAGTGACAGTTGGGGTTTATTTGTGAGATTTGCTTTTCGAGGTAGGAATGTGTTTGAATATCCAAATCTTGAATTGATAGCCAAGAAAATAGTAGAAAAGTGTGGGGGGTTTCCTTTAGCTCTGAAGAGATTGGGGATTCTCTTGCAAATAAAATTCTCTGAACCTGAATGGGTTAAGATACTGGAGACTGATTTGTGGCGTTTACCTGAGGGTGACATCAACATTAATTCCGTTCTGAGAATGAGTTACCTTAGCCTCCCTTCCAATCTGAAGCGTTGTTTTGCTTTTTGTTCTATATTTCCCAAGGGCTATGAGTTTGAGAAGGGTGAATTAATCAAGCTTTGGATTGCAGAAGGTTTGTTGAAGTGTAAGTATGAGGGAAAAATTCGAAACGAAGAAGAGTTAGGTAATGAATTCTTCGATCATCTAGTGTCAATGTCATTTTTCCAACAATCAGTAATAATGCCATCATGGTCTGGTAAGTACTACTTCATAATGCATGATCTTGTCAATGATTTAGCGAAATCATTGTCAGGAGAATCCCGTTTAAGAATAGAGGGTGATAATGTGCAAGATATCCCTCAAAGGACACGCCACATTTGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACATTTAGCGAAATCATTGTCAGGAGAATCCCGTTTAAGAATAGAGAGTGATAATGTGCAAGATATCCCTCAAAGGACACGCCACATTTGGTGCTGCCTTGATTTGGAAGATGGTGATAGAAAACTAGAGCATGTTAAAAAAATCAAGGGACTGCACAGTCTGATGGTACAAGCCCAGGGTTATGGTGACCAACGCTTTAAGATAAGCGCCGATGTGCAGCTTAATTTGTTTTTAAGACTAAAATTTTTACGGATGTTGTCTTTCAATGGTTGCAATCACTTAGAGCTAGCTGATGAGATAAGAAATTTAAAGCTTCTGCGCTATCTAGACCTTTCTTACACCGAGATTACAAGCTTACCTAATTCCATTTGTATGCTCATTGATTTGCATACGCTCTTACTAGAAGAATGTTTTAAATTGACTGAGCTCCCATCAAATTTTCGCAAACTCATCAATTTACGTCATCTTAATTTGAAAGGCACACATATTAAGAAGATGCCAAAGGGGATAAGAGGGTTAATCAATCTTGAGATGCTGACTGATTTTGTTGTGGGAGAGCAGTGTGGAGTTGATATTAAGCAGTTGGCAGAACTCGACCACCTTAAAGGAAGGCTTCAAATTTCAGGGTTGAAAAGTGTGGCTGATCCAGCAGATGCTATGGCAGCAAATTTGAAAGATAAGAAACATTTAGAAGAATTATGTATGTCATACGATGAATGGAGAGAAATGGATGGCTCACTAACCGAAGCACGTGTCTCCGTCTTGGAGGCTCTTCAACCAAATAGAAACCTCATGAGGCTCACCATCAATGACTACAGAGGTAGCAGCTTTCCAAATTGGTTCAGGGATCATCATTTACCCAATTTAGTATCTCTAGAATTGTTGGGATGTAAACTCTGTTCCCAGTTGCCACCACTTGGGCAATTCCCTTCTCTCAAGAAGCTTTCCATTTCAGGCTGTCACGGAATAGAGATCATTGGTTCAGAGTTTTGCGGCTATAATTCATCAAATGTTCCATTTAGATCCCTTGAAACTTTGTGTTTTAAGAACATGTCTGAATGGAAGGAATGGTTATGTCTTGAAGGTTTCCCTTTGCTTCAAGAGCTTTGTATAAAACATTGTCCCAAGTTAAAAAGTGCCCTGCCTCAACACCTTCCTTGTTTGCAAAAGTTGGAGATTATTGATTGCCAAGAGTTGGAGGCTTCAATTCCCAAGGCTGATAATATCAGTGAGCTAGAACTAAAGAGATGTGATGGCATTTTGATAAATGAATTTCCATCCAGATTGGAAAGGGTCATCCTTTGTGGAACACAGGTCATTGAATCCACCCTAGAGAAAATTCTATTTAACAGTCCATTTCTTAAAGAATTGGAAGTTGAAGACTTCTTTGGTCCAAATGTAGAATGGTCCTCTCTGGATATTTGTCGTCGTAATTCTCTTCGCACTTTAACTATAACAGGTTGGCACTCTTCCTCATTGCCTTTTGCACTCGACCACTTCGCCAGTCTTAATTCTCTTGCATTGTATGATTGTCCATGGCTGGAATCGTTTTTTGGGAGGCAGTTGCCTTCCAACCTATGCAGCCTCCGAATAGAAAGATGCCCTAATTTGATGGCTTCGAGTTACGAGTGGGGTTTGTTTCAACTTAATTCGCTGAAACTATTATGTGTTAGTGATGATTTTGAAATCTTAGATTCCTTTCCAGAGGAGAGTATCTTGCCATCAACTATTAAATCTCTTGAGTTAACAAATTGTTCCAACCTAAGAATAATAAACTACAGGGGTCTTCTCCACCTCACTTCACTTGAATCTCTATATATTGAAGACTGCCCTTGTCTTGAGAAGTTGCCAGAGGAGGGTCTACCCATCTCCCTTTCTACTTTGTCAATTCATGACTGTCCATTACTTAAGCAGTTGTACCAAAAGGAGCAAGGAGAGCGGTGGCATACAATTTGTCACATACCTTATGTGACAATTTCCTGA
Protein sequence

>Msa0349100

MSISLEVSHQEDMEILQRRLQDELQWKVYLLVLDDVLIEHWNMLEHLLLLLNQESSLGKIIVTTQDKEVASVMRSTQILHLRQLDESDSWGLFVRFAFRGRNVFEYPNLELIAKKIVEKCGGFPLALKRLGILLQIKFSEPEWVKILETDLWRLPEGDININSVLRMSYLSLPSNLKRCFAFCSIFPKGYEFEKGELIKLWIAEGLLKCKYEGKIRNEEELGNEFFDHLVSMSFFQQSVIMPSWSGKYYFIMHDLVNDLAKSLSGESRLRIEGDNVQDIPQRTRHIWCCLDLEDGDRKHLAKSLSGESRLRIESDNVQDIPQRTRHIWCCLDLEDGDRKLEHVKKIKGLHSLMVQAQGYGDQRFKISADVQLNLFLRLKFLRMLSFNGCNHLELADEIRNLKLLRYLDLSYTEITSLPNSICMLIDLHTLLLEECFKLTELPSNFRKLINLRHLNLKGTHIKKMPKGIRGLINLEMLTDFVVGEQCGVDIKQLAELDHLKGRLQISGLKSVADPADAMAANLKDKKHLEELCMSYDEWREMDGSLTEARVSVLEALQPNRNLMRLTINDYRGSSFPNWFRDHHLPNLVSLELLGCKLCSQLPPLGQFPSLKKLSISGCHGIEIIGSEFCGYNSSNVPFRSLETLCFKNMSEWKEWLCLEGFPLLQELCIKHCPKLKSALPQHLPCLQKLEIIDCQELEASIPKADNISELELKRCDGILINEFPSRLERVILCGTQVIESTLEKILFNSPFLKELEVEDFFGPNVEWSSLDICRRNSLRTLTITGWHSSSLPFALDHFASLNSLALYDCPWLESFFGRQLPSNLCSLRIERCPNLMASSYEWGLFQLNSLKLLCVSDDFEILDSFPEESILPSTIKSLELTNCSNLRIINYRGLLHLTSLESLYIEDCPCLEKLPEEGLPISLSTLSIHDCPLLKQLYQKEQGERWHTICHIPYVTIS*