AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0150000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0150000 MtrunA17_Chr1g0146171 93.117 247 17 0 1 247 1 247 4.19e-167 461
Msa0150000 MtrunA17_Chr1g0146161 86.235 247 34 0 1 247 1 247 1.55e-155 432
Msa0150000 MtrunA17_Chr8g0340161 54.435 248 107 3 1 243 1 247 1.93e-86 257
Msa0150000 MtrunA17_Chr2g0331261 53.279 244 110 2 4 243 5 248 8.24e-85 253
Msa0150000 MtrunA17_Chr4g0030861 50.833 240 114 2 1 236 3 242 1.25e-76 232
Msa0150000 MtrunA17_Chr5g0399341 50.201 249 116 4 1 244 1 246 8.92e-76 229
Msa0150000 MtrunA17_Chr1g0212671 48.560 243 120 3 3 240 5 247 5.13e-75 228
Msa0150000 MtrunA17_Chr7g0264961 52.459 244 111 3 1 240 3 245 9.99e-75 227
Msa0150000 MtrunA17_Chr7g0222791 50.617 243 115 3 3 240 5 247 3.27e-72 221
Msa0150000 MtrunA17_Chr1g0188771 43.083 253 133 3 3 244 5 257 7.82e-68 210
Msa0150000 MtrunA17_Chr6g0478191 44.400 250 131 3 3 244 5 254 7.87e-67 207
Msa0150000 MtrunA17_Chr4g0020781 42.353 170 97 1 63 232 27 195 5.83e-42 142
Msa0150000 MtrunA17_Chr5g0426131 33.588 262 142 8 3 247 14 260 3.70e-31 115
Msa0150000 MtrunA17_Chr2g0326621 33.977 259 135 11 10 241 31 280 1.28e-30 115
Msa0150000 MtrunA17_Chr7g0264111 34.413 247 137 9 9 234 29 271 4.24e-30 113
Msa0150000 MtrunA17_Chr4g0029071 34.981 263 126 13 10 241 30 278 8.48e-30 112
Msa0150000 MtrunA17_Chr1g0199731 34.109 258 135 10 10 241 30 278 3.24e-28 108
Msa0150000 MtrunA17_Chr4g0006001 35.652 230 122 9 19 229 56 278 1.12e-27 107
Msa0150000 MtrunA17_Chr3g0145671 34.043 235 128 10 19 234 37 263 2.91e-27 105
Msa0150000 MtrunA17_Chr5g0397391 34.764 233 121 9 19 229 52 275 6.13e-27 105
Msa0150000 MtrunA17_Chr2g0284611 33.906 233 145 6 18 247 37 263 1.39e-26 103
Msa0150000 MtrunA17_Chr5g0435051 35.217 230 140 7 18 245 39 261 2.84e-26 103
Msa0150000 MtrunA17_Chr8g0386961 34.454 238 124 10 19 234 52 279 5.80e-26 102
Msa0150000 MtrunA17_Chr4g0001221 35.122 205 113 7 24 220 80 272 2.28e-25 101
Msa0150000 MtrunA17_Chr1g0201331 35.885 209 115 7 24 225 79 275 3.98e-25 100
Msa0150000 MtrunA17_Chr3g0079421 35.160 219 129 8 18 232 25 234 4.67e-25 99.8
Msa0150000 MtrunA17_Chr5g0436701 34.440 241 127 10 10 228 46 277 2.47e-24 98.2
Msa0150000 MtrunA17_Chr3g0113211 31.020 245 141 8 10 234 46 282 3.16e-24 98.2
Msa0150000 MtrunA17_Chr2g0333771 36.275 204 112 7 24 220 85 277 3.66e-24 98.2
Msa0150000 MtrunA17_Chr2g0284591 32.530 249 158 7 2 247 20 261 3.72e-24 97.4
Msa0150000 MtrunA17_Chr2g0284631 33.778 225 138 8 18 239 90 306 6.11e-24 98.2
Msa0150000 MtrunA17_Chr7g0217331 34.123 211 133 4 19 228 37 242 8.26e-24 96.7
Msa0150000 MtrunA17_Chr1g0184541 32.877 219 138 6 16 232 59 270 4.60e-23 95.1
Msa0150000 MtrunA17_Chr8g0379911 32.510 243 152 9 1 240 21 254 6.88e-22 91.3
Msa0150000 MtrunA17_Chr8g0379901 30.973 226 145 8 18 240 38 255 1.72e-20 87.8
Msa0150000 MtrunA17_Chr4g0044201 32.743 226 130 9 18 240 34 240 5.14e-20 86.3
Msa0150000 MtrunA17_Chr2g0284581 30.667 225 140 7 7 221 19 237 4.59e-19 84.0
Msa0150000 MtrunA17_Chr2g0284601 33.511 188 118 5 36 220 5 188 1.25e-16 76.3
Msa0150000 MtrunA17_Chr4g0038591 27.985 268 161 8 3 247 36 294 2.75e-15 73.9
Msa0150000 MtrunA17_Chr4g0038611 30.769 182 102 4 73 234 41 218 4.83e-14 69.7
Msa0150000 MtrunA17_Chr6g0467461 31.481 108 55 2 125 232 4 92 3.17e-13 64.3
Msa0150000 MtrunA17_Chr8g0362451 34.409 93 42 2 140 232 8 81 5.65e-12 60.5
Msa0150000 MtrunA17_Chr4g0001111 32.414 145 82 5 24 161 80 215 1.25e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0150000 AT2G25810.1 75.510 245 60 0 1 245 1 245 6.81e-128 362
Msa0150000 AT2G36830.1 53.279 244 110 2 1 240 3 246 1.65e-85 255
Msa0150000 AT3G16240.1 53.252 246 108 4 1 240 1 245 3.74e-85 254
Msa0150000 AT3G26520.1 53.419 234 105 2 7 236 10 243 1.57e-81 245
Msa0150000 AT5G47450.1 52.743 237 108 2 1 233 1 237 9.82e-81 243
Msa0150000 AT4G17340.1 51.600 250 114 3 1 245 1 248 2.66e-78 236
Msa0150000 AT4G01470.1 48.996 249 122 3 1 244 3 251 5.17e-75 228
Msa0150000 AT1G73190.1 49.367 237 111 2 6 233 11 247 1.08e-71 220
Msa0150000 AT1G17810.1 47.266 256 118 3 6 244 11 266 1.65e-69 215
Msa0150000 AT3G47440.1 43.498 223 119 3 16 233 20 240 2.79e-51 168
Msa0150000 AT4G35100.1 36.929 241 127 11 19 241 38 271 2.86e-31 117
Msa0150000 AT4G35100.2 36.929 241 127 11 19 241 38 271 2.86e-31 117
Msa0150000 AT5G60660.1 33.333 252 145 9 10 241 30 278 3.65e-31 117
Msa0150000 AT2G37170.2 33.200 250 134 10 10 234 71 312 4.88e-30 114
Msa0150000 AT2G37180.1 33.735 249 138 10 10 236 28 271 4.95e-30 114
Msa0150000 AT2G37170.1 32.937 252 136 10 10 236 28 271 5.92e-30 113
Msa0150000 AT2G39010.1 33.333 246 139 9 10 234 29 270 2.48e-29 112
Msa0150000 AT3G53420.1 34.454 238 133 10 19 236 39 273 2.17e-28 109
Msa0150000 AT3G53420.2 34.454 238 133 10 19 236 39 273 2.17e-28 109
Msa0150000 AT3G54820.1 33.898 236 133 9 19 234 38 270 3.20e-28 108
Msa0150000 AT2G16850.1 33.878 245 139 10 19 246 36 274 1.54e-27 107
Msa0150000 AT4G00430.1 36.245 229 122 9 19 229 53 275 2.92e-27 106
Msa0150000 AT1G01620.1 35.217 230 123 9 19 229 52 274 2.48e-26 103
Msa0150000 AT1G80760.1 35.238 210 118 6 19 221 80 278 3.90e-26 103
Msa0150000 AT4G23400.1 35.217 230 123 9 19 229 53 275 1.25e-25 102
Msa0150000 AT2G45960.1 34.934 229 123 9 19 228 52 273 2.82e-25 101
Msa0150000 AT3G61430.2 34.934 229 123 9 19 228 52 273 2.88e-25 101
Msa0150000 AT3G61430.1 34.934 229 123 9 19 228 52 273 2.88e-25 101
Msa0150000 AT4G10380.1 34.222 225 130 6 19 236 78 291 7.51e-25 100
Msa0150000 AT5G37820.1 35.808 229 128 8 19 240 43 259 5.05e-24 97.8
Msa0150000 AT5G37820.2 35.808 229 128 8 19 240 79 295 7.79e-24 97.8
Msa0150000 AT5G37810.1 35.000 240 132 9 12 240 33 259 2.35e-23 95.9
Msa0150000 AT4G19030.1 33.190 232 139 8 18 240 54 278 2.60e-23 96.3
Msa0150000 AT1G52180.1 50.000 84 42 0 125 208 39 122 4.86e-23 91.3
Msa0150000 AT4G18910.1 33.047 233 138 7 18 240 51 275 6.10e-23 95.1
Msa0150000 AT1G31885.1 34.742 213 125 5 18 221 42 249 9.27e-23 95.1
Msa0150000 AT1G01620.2 33.493 209 117 8 36 229 1 202 9.21e-22 90.1
Msa0150000 AT3G06100.1 30.594 219 143 6 16 231 43 255 9.61e-21 89.0
Msa0150000 AT1G31885.2 36.000 175 100 4 56 221 24 195 2.84e-19 84.7
Msa0150000 AT3G06100.2 30.952 210 136 6 24 230 3 206 4.46e-19 83.2
Msa0150000 AT2G45960.2 32.701 211 116 9 19 210 52 255 2.31e-16 76.6
Msa0150000 AT2G45960.3 32.701 211 116 9 19 210 52 255 2.79e-16 77.0
Msa0150000 AT2G34390.1 29.091 220 143 6 18 229 47 261 6.64e-15 72.8
Msa0150000 AT2G34390.2 29.493 217 140 6 21 229 8 219 1.02e-14 71.6
Msa0150000 AT4G00430.2 34.756 164 90 7 19 171 53 210 2.10e-12 65.1
Msa0150000 AT2G39010.2 29.545 176 107 6 10 171 29 201 2.70e-11 62.0

Find 83 sgRNAs with CRISPR-Local

Find 734 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAAGAAAGGAGGACTTTC+TGG 0.139053 1_4:-11126372 Msa0150000:CDS
ACAACAAATCCAACCAAAAT+TGG 0.151579 1_4:+11126342 None:intergenic
CTCATTGGTGGTGGGCTTGC+TGG 0.168087 1_4:-11126198 Msa0150000:CDS
CTGCTTTGGTTAGTGGAAAT+TGG 0.185229 1_4:-11126251 Msa0150000:CDS
GTTAATTTGTCTTAATAAAT+TGG 0.188381 1_4:-11130398 Msa0150000:five_prime_UTR
TTCTGGACTTGGCCCAATTT+TGG 0.189335 1_4:-11126355 Msa0150000:CDS
CCAGAAAGTCCTCCTTTCTT+TGG 0.192856 1_4:+11126372 None:intergenic
ACCTTTCTCTTTGTCTTTGC+TGG 0.204008 1_4:-11130226 Msa0150000:CDS
ATGAATCCAGCAAGATCTTT+TGG 0.260996 1_4:-11126276 Msa0150000:CDS
GGTTGTTCCTAAAGAGATTT+TGG 0.265315 1_4:+11130303 None:intergenic
CTCTTTGTCTTTGCTGGTGT+TGG 0.290840 1_4:-11130220 Msa0150000:CDS
ATATCCGCCGGTCACGTTTC+CGG 0.326886 1_4:-11129673 Msa0150000:CDS
TTTGGACCTGCTTTGGTTAG+TGG 0.334512 1_4:-11126258 Msa0150000:CDS
TGATTAGATGTTCCTCTGCT+TGG 0.340690 1_4:-11126044 Msa0150000:three_prime_UTR
ATTAGAGCTCGGATGCAATT+AGG 0.343774 1_4:+11130265 None:intergenic
TTTGAATCCCGCCGTGACCT+TGG 0.347716 1_4:-11129644 Msa0150000:CDS
GATTAGATGTTCCTCTGCTT+GGG 0.355675 1_4:-11126043 Msa0150000:three_prime_UTR
AATATGACCAAAATCTCTTT+AGG 0.363930 1_4:-11130310 Msa0150000:CDS
GGGCTAACATCTTGGCTGGC+GGG 0.363981 1_4:-11126317 Msa0150000:CDS
GGCTATGGCACAAACTCTTC+TGG 0.370987 1_4:-11129707 Msa0150000:CDS
TTGAATCCCGCCGTGACCTT+GGG 0.371209 1_4:-11129643 Msa0150000:CDS
GGTGTACTCAAGGAGTAGTT+TGG 0.378665 1_4:-11126449 Msa0150000:CDS
GTTCACTGTGTATGCAACTA+TGG 0.382620 1_4:-11126400 Msa0150000:CDS
AAAAGATCTTGCTGGATTCA+TGG 0.384219 1_4:+11126278 None:intergenic
GTGACCTTGGGCCTCCTTGT+TGG 0.384806 1_4:-11129631 Msa0150000:CDS
TTGGCTGGCGGGGCTTTCGC+AGG 0.386405 1_4:-11126306 Msa0150000:CDS
TGTTGTAGGGGCTAACATCT+TGG 0.405323 1_4:-11126325 Msa0150000:CDS
TTGGGCCTCTCATTGGTGGT+GGG 0.408100 1_4:-11126206 Msa0150000:CDS
ATTAGGTTGAGTAGCCTCTT+GGG 0.416839 1_4:+11130282 None:intergenic
TGGGTTGGGCCTCTCATTGG+TGG 0.430148 1_4:-11126210 Msa0150000:CDS
GTTGGGCCTCTCATTGGTGG+TGG 0.433600 1_4:-11126207 Msa0150000:CDS
GCTAAGTGAAGATGGTTTAG+TGG 0.434560 1_4:-11129743 Msa0150000:CDS
CAACAAATCCAACCAAAATT+GGG 0.439747 1_4:+11126343 None:intergenic
AAAGGAGGACTTTCTGGACT+TGG 0.441144 1_4:-11126366 Msa0150000:CDS
GCAGGTCCAAAAGATCTTGC+TGG 0.444089 1_4:+11126270 None:intergenic
TATCTTCTTCATTACCTCAC+TGG 0.445469 1_4:-11129538 Msa0150000:CDS
TTAGATAAGCTAAGTGAAGA+TGG 0.450182 1_4:-11129751 Msa0150000:intron
TGGAAATTGGACTGACCAAT+GGG 0.457985 1_4:-11126238 Msa0150000:CDS
GGCTAACATCTTGGCTGGCG+GGG 0.461965 1_4:-11126316 Msa0150000:CDS
AATTAGGTTGAGTAGCCTCT+TGG 0.462527 1_4:+11130281 None:intergenic
AGGTCACGGCGGGATTCAAA+TGG 0.475016 1_4:+11129647 None:intergenic
GTGTACTCAAGGAGTAGTTT+GGG 0.480313 1_4:-11126448 Msa0150000:CDS
AACAAGGAGGCCCAAGGTCA+CGG 0.484302 1_4:+11129633 None:intergenic
CATACACTTAAAAGTGGAGT+AGG 0.484564 1_4:-11126471 Msa0150000:CDS
CTTCTTCATTACCTCACTGG+TGG 0.484926 1_4:-11129535 Msa0150000:CDS
CCAGTTCATACACTTAAAAG+TGG 0.496805 1_4:-11126477 Msa0150000:CDS
GTGGAAATTGGACTGACCAA+TGG 0.502211 1_4:-11126239 Msa0150000:CDS
CTAAGTGAAGATGGTTTAGT+GGG 0.510777 1_4:-11129742 Msa0150000:CDS
AGCTACTAAGAATTAAGATT+AGG 0.511363 1_4:-11126114 Msa0150000:exon
ATGGCCACCGGAAACGTGAC+CGG 0.514153 1_4:+11129666 None:intergenic
GGGGCTAACATCTTGGCTGG+CGG 0.514242 1_4:-11126318 Msa0150000:CDS
ACCTTGGGCCTCCTTGTTGG+CGG 0.515259 1_4:-11129628 Msa0150000:CDS
CGGTGATGTGGCCGCCAACA+AGG 0.518058 1_4:+11129617 None:intergenic
AGGAGGCCCAAGGTCACGGC+GGG 0.520183 1_4:+11129637 None:intergenic
GTAGGGGCTAACATCTTGGC+TGG 0.532312 1_4:-11126321 Msa0150000:CDS
GTGACCGGCGGATATCATTA+CGG 0.543565 1_4:+11129681 None:intergenic
GATCAACATATAGCATCTGC+AGG 0.544628 1_4:-11129568 Msa0150000:CDS
ACCAGCAAAGACAAAGAGAA+AGG 0.549120 1_4:+11130225 None:intergenic
CAATTTCCACTAACCAAAGC+AGG 0.561106 1_4:+11126252 None:intergenic
ACTATGGTTGATCCAAAGAA+AGG 0.565384 1_4:-11126384 Msa0150000:CDS
AACTCATGTTCCTCTCCTTG+TGG 0.565628 1_4:-11126145 Msa0150000:CDS
TTTGGTTGGATTTGTTGTAG+GGG 0.576606 1_4:-11126337 Msa0150000:CDS
GCAAGCCCACCACCAATGAG+AGG 0.582625 1_4:+11126201 None:intergenic
GCCGCCAACAAGGAGGCCCA+AGG 0.586419 1_4:+11129627 None:intergenic
TGAATTCAACAATTAGAGCT+CGG 0.592863 1_4:+11130254 None:intergenic
CTTTCTTCATCCACAAGGAG+AGG 0.595545 1_4:+11126135 None:intergenic
GGCGGGATTCAAATGGCCAC+CGG 0.596177 1_4:+11129654 None:intergenic
CAATCCAATAAAAGATAGAA+CGG 0.602064 1_4:+11129590 None:intergenic
TAGAACGGACGACGGTGATG+TGG 0.614235 1_4:+11129605 None:intergenic
AGTGGAGTAGGGTGTACTCA+AGG 0.614383 1_4:-11126459 Msa0150000:CDS
AGTAGCTTTCTTCATCCACA+AGG 0.615821 1_4:+11126130 None:intergenic
TCCGCCGGTCACGTTTCCGG+TGG 0.622015 1_4:-11129670 Msa0150000:CDS
ATACACTTAAAAGTGGAGTA+GGG 0.631270 1_4:-11126470 Msa0150000:CDS
TATGGCACAAACTCTTCTGG+TGG 0.643332 1_4:-11129704 Msa0150000:CDS
ATGGTTGATCCAAAGAAAGG+AGG 0.657733 1_4:-11126381 Msa0150000:CDS
TTCAATATAAACCCAAGCAG+AGG 0.661255 1_4:+11126032 None:intergenic
GTGGCCGTAATGATATCCGC+CGG 0.663799 1_4:-11129685 Msa0150000:CDS
GCCACCGGAAACGTGACCGG+CGG 0.669384 1_4:+11129669 None:intergenic
CTCTTTAGGAACAACCCAAG+AGG 0.672884 1_4:-11130296 Msa0150000:CDS
AAGGAGGCCCAAGGTCACGG+CGG 0.691357 1_4:+11129636 None:intergenic
TGATGTGGCCGCCAACAAGG+AGG 0.709158 1_4:+11129620 None:intergenic
CACTTACTAATCCACCAGTG+AGG 0.739020 1_4:+11129524 None:intergenic
ATAAAAGATAGAACGGACGA+CGG 0.755319 1_4:+11129597 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATAAAATTAAATTTTA+TGG - chr1_4:11128795-11128814 Msa0150000:intron 0.0%
!!! TTATATAAAATTAAATTTTA+TGG - chr1_4:11128795-11128814 Msa0150000:intron 0.0%
!!! ATATAATTTTATTAAAGGTT+TGG - chr1_4:11126378-11126397 Msa0150000:CDS 10.0%
!!! TTATCTAATGAAATAAATTT+TGG + chr1_4:11126691-11126710 None:intergenic 10.0%
!!! TTACATAAATGTTTTTTTTA+AGG + chr1_4:11127198-11127217 None:intergenic 10.0%
!! TAAAAAAAACATTTATGTAA+AGG - chr1_4:11127198-11127217 Msa0150000:intron 10.0%
!!! TTTTTTTTATGATGTTAATA+TGG + chr1_4:11128087-11128106 None:intergenic 10.0%
!!! ATATAATTTTATTAAAGGTT+TGG - chr1_4:11126378-11126397 Msa0150000:CDS 10.0%
!!! TTATCTAATGAAATAAATTT+TGG + chr1_4:11126691-11126710 None:intergenic 10.0%
!!! TTACATAAATGTTTTTTTTA+AGG + chr1_4:11127198-11127217 None:intergenic 10.0%
!! TAAAAAAAACATTTATGTAA+AGG - chr1_4:11127198-11127217 Msa0150000:intron 10.0%
!!! TTTTTTTTATGATGTTAATA+TGG + chr1_4:11128087-11128106 None:intergenic 10.0%
!!! GTTAATTTGTCTTAATAAAT+TGG - chr1_4:11126056-11126075 Msa0150000:three_prime_UTR 15.0%
!! CAATTCAAATATATTGATAT+GGG + chr1_4:11126336-11126355 None:intergenic 15.0%
!! TCAATTCAAATATATTGATA+TGG + chr1_4:11126337-11126356 None:intergenic 15.0%
!!! AATTAATTTCTAAAGTTTAG+AGG - chr1_4:11127290-11127309 Msa0150000:intron 15.0%
!! TAAATTTCTAAACTTTATCT+TGG + chr1_4:11127333-11127352 None:intergenic 15.0%
!!! TCTTCACTTAATTTATTTTA+AGG - chr1_4:11127370-11127389 Msa0150000:intron 15.0%
!!! CTTCACTTAATTTATTTTAA+GGG - chr1_4:11127371-11127390 Msa0150000:intron 15.0%
!! TCATAAACAATATTTACATA+AGG + chr1_4:11127413-11127432 None:intergenic 15.0%
!! GAAAATATTGTTTGATATTA+TGG - chr1_4:11128648-11128667 Msa0150000:intron 15.0%
!!! GTTAATTTGTCTTAATAAAT+TGG - chr1_4:11126056-11126075 Msa0150000:three_prime_UTR 15.0%
!! CAATTCAAATATATTGATAT+GGG + chr1_4:11126336-11126355 None:intergenic 15.0%
!! TCAATTCAAATATATTGATA+TGG + chr1_4:11126337-11126356 None:intergenic 15.0%
!!! AATTAATTTCTAAAGTTTAG+AGG - chr1_4:11127290-11127309 Msa0150000:intron 15.0%
!! TAAATTTCTAAACTTTATCT+TGG + chr1_4:11127333-11127352 None:intergenic 15.0%
!!! TCTTCACTTAATTTATTTTA+AGG - chr1_4:11127370-11127389 Msa0150000:intron 15.0%
!!! CTTCACTTAATTTATTTTAA+GGG - chr1_4:11127371-11127390 Msa0150000:intron 15.0%
!! TCATAAACAATATTTACATA+AGG + chr1_4:11127413-11127432 None:intergenic 15.0%
!! GAAAATATTGTTTGATATTA+TGG - chr1_4:11128648-11128667 Msa0150000:intron 15.0%
!! TTTCAAATTACTATATGTGT+CGG - chr1_4:11126522-11126541 Msa0150000:intron 20.0%
!!! ATTTTTAACTTCTTGACTTA+GGG + chr1_4:11127240-11127259 None:intergenic 20.0%
!!! TATTTTTAACTTCTTGACTT+AGG + chr1_4:11127241-11127260 None:intergenic 20.0%
!! TAAATTAAGTGAAGAATTCA+AGG + chr1_4:11127365-11127384 None:intergenic 20.0%
!! AATAGAATATTCGTAACATT+GGG + chr1_4:11127679-11127698 None:intergenic 20.0%
!!! TATCAAACAATATTTTCGTA+AGG + chr1_4:11128645-11128664 None:intergenic 20.0%
!! GCTTAAAGCAAAAAATTTAA+TGG - chr1_4:11128742-11128761 Msa0150000:intron 20.0%
!! AGGCATCTAAAAATTTAATT+TGG + chr1_4:11128925-11128944 None:intergenic 20.0%
!!! TTTTGAAATATGTAGAATGT+GGG - chr1_4:11129406-11129425 Msa0150000:intron 20.0%
!!! TTTTTGTTTTTTGCATTGTA+TGG + chr1_4:11129749-11129768 None:intergenic 20.0%
!! TCTTTATCAATTGTGATAAA+TGG + chr1_4:11129831-11129850 None:intergenic 20.0%
!! AAATAATGATCAAGATATTC+TGG - chr1_4:11129851-11129870 Msa0150000:intron 20.0%
!! TTTCAAATTACTATATGTGT+CGG - chr1_4:11126522-11126541 Msa0150000:intron 20.0%
!!! ATTTTTAACTTCTTGACTTA+GGG + chr1_4:11127240-11127259 None:intergenic 20.0%
!!! TATTTTTAACTTCTTGACTT+AGG + chr1_4:11127241-11127260 None:intergenic 20.0%
!! TAAATTAAGTGAAGAATTCA+AGG + chr1_4:11127365-11127384 None:intergenic 20.0%
!! AATAGAATATTCGTAACATT+GGG + chr1_4:11127679-11127698 None:intergenic 20.0%
!!! TATCAAACAATATTTTCGTA+AGG + chr1_4:11128645-11128664 None:intergenic 20.0%
!! GCTTAAAGCAAAAAATTTAA+TGG - chr1_4:11128742-11128761 Msa0150000:intron 20.0%
!! AGGCATCTAAAAATTTAATT+TGG + chr1_4:11128925-11128944 None:intergenic 20.0%
!!! TTTTGAAATATGTAGAATGT+GGG - chr1_4:11129406-11129425 Msa0150000:intron 20.0%
!!! TTTTTGTTTTTTGCATTGTA+TGG + chr1_4:11129749-11129768 None:intergenic 20.0%
!! TCTTTATCAATTGTGATAAA+TGG + chr1_4:11129831-11129850 None:intergenic 20.0%
!! AAATAATGATCAAGATATTC+TGG - chr1_4:11129851-11129870 Msa0150000:intron 20.0%
! AATATGACCAAAATCTCTTT+AGG - chr1_4:11126144-11126163 Msa0150000:CDS 25.0%
! TACTAATAACCTATGAAGTA+CGG - chr1_4:11126419-11126438 Msa0150000:CDS 25.0%
! ATGTTAGAAAGTTATTAGCT+AGG + chr1_4:11126591-11126610 None:intergenic 25.0%
! GTTAATTTAACGGTAAAAGT+TGG + chr1_4:11126645-11126664 None:intergenic 25.0%
! AAGTCTCTGAGTTAATTTAA+CGG + chr1_4:11126655-11126674 None:intergenic 25.0%
!!! TTTAGTGGGATTATTTTTTG+TGG - chr1_4:11126726-11126745 Msa0150000:intron 25.0%
! CAATCCAATAAAAGATAGAA+CGG + chr1_4:11126867-11126886 None:intergenic 25.0%
! AGAATTAAGTGATGAATTCT+AGG - chr1_4:11127260-11127279 Msa0150000:intron 25.0%
! GAATAGAATATTCGTAACAT+TGG + chr1_4:11127680-11127699 None:intergenic 25.0%
! GGTTGAGTTTATTTGTAATT+AGG + chr1_4:11127940-11127959 None:intergenic 25.0%
!!! TATCTCAATGACTTTTAGTT+TGG + chr1_4:11128138-11128157 None:intergenic 25.0%
! CGGTTATTAAAATATGTTAG+TGG + chr1_4:11128246-11128265 None:intergenic 25.0%
!!! ATATTTTAATAACCGTGTCA+AGG - chr1_4:11128251-11128270 Msa0150000:intron 25.0%
!!! TATTTTAATAACCGTGTCAA+GGG - chr1_4:11128252-11128271 Msa0150000:intron 25.0%
! ACAAATTATACCAAACTCAA+CGG - chr1_4:11128285-11128304 Msa0150000:intron 25.0%
! TTATTTGCATTATGTGGAAA+AGG + chr1_4:11128380-11128399 None:intergenic 25.0%
! TTCCACATAATGCAAATAAT+AGG - chr1_4:11128381-11128400 Msa0150000:intron 25.0%
! ATAATGCAAATAATAGGTGT+TGG - chr1_4:11128387-11128406 Msa0150000:intron 25.0%
! TAAGGATAAAGACAAAAGAA+GGG + chr1_4:11128674-11128693 None:intergenic 25.0%
! TTAAGGATAAAGACAAAAGA+AGG + chr1_4:11128675-11128694 None:intergenic 25.0%
!!! TTATGGAGGAGATTATTTTA+AGG + chr1_4:11128692-11128711 None:intergenic 25.0%
!! TTGGTCATGAATCTAAATTT+TGG + chr1_4:11128824-11128843 None:intergenic 25.0%
!! TTGCAACAATATCACATTTT+TGG + chr1_4:11129104-11129123 None:intergenic 25.0%
!!! GTTTTGAAATATGTAGAATG+TGG - chr1_4:11129405-11129424 Msa0150000:intron 25.0%
!! CAATTTGTGTCTTTTATTGT+TGG - chr1_4:11129899-11129918 Msa0150000:intron 25.0%
! AGCTACTAAGAATTAAGATT+AGG - chr1_4:11130340-11130359 Msa0150000:five_prime_UTR 25.0%
! AATATGACCAAAATCTCTTT+AGG - chr1_4:11126144-11126163 Msa0150000:CDS 25.0%
! TACTAATAACCTATGAAGTA+CGG - chr1_4:11126419-11126438 Msa0150000:CDS 25.0%
! ATGTTAGAAAGTTATTAGCT+AGG + chr1_4:11126591-11126610 None:intergenic 25.0%
! GTTAATTTAACGGTAAAAGT+TGG + chr1_4:11126645-11126664 None:intergenic 25.0%
! AAGTCTCTGAGTTAATTTAA+CGG + chr1_4:11126655-11126674 None:intergenic 25.0%
!!! TTTAGTGGGATTATTTTTTG+TGG - chr1_4:11126726-11126745 Msa0150000:intron 25.0%
! CAATCCAATAAAAGATAGAA+CGG + chr1_4:11126867-11126886 None:intergenic 25.0%
! AGAATTAAGTGATGAATTCT+AGG - chr1_4:11127260-11127279 Msa0150000:intron 25.0%
! GAATAGAATATTCGTAACAT+TGG + chr1_4:11127680-11127699 None:intergenic 25.0%
! GGTTGAGTTTATTTGTAATT+AGG + chr1_4:11127940-11127959 None:intergenic 25.0%
!!! TATCTCAATGACTTTTAGTT+TGG + chr1_4:11128138-11128157 None:intergenic 25.0%
! CGGTTATTAAAATATGTTAG+TGG + chr1_4:11128246-11128265 None:intergenic 25.0%
!!! ATATTTTAATAACCGTGTCA+AGG - chr1_4:11128251-11128270 Msa0150000:intron 25.0%
!!! TATTTTAATAACCGTGTCAA+GGG - chr1_4:11128252-11128271 Msa0150000:intron 25.0%
! ACAAATTATACCAAACTCAA+CGG - chr1_4:11128285-11128304 Msa0150000:intron 25.0%
! TTATTTGCATTATGTGGAAA+AGG + chr1_4:11128380-11128399 None:intergenic 25.0%
! TTCCACATAATGCAAATAAT+AGG - chr1_4:11128381-11128400 Msa0150000:intron 25.0%
! ATAATGCAAATAATAGGTGT+TGG - chr1_4:11128387-11128406 Msa0150000:intron 25.0%
! TAAGGATAAAGACAAAAGAA+GGG + chr1_4:11128674-11128693 None:intergenic 25.0%
! TTAAGGATAAAGACAAAAGA+AGG + chr1_4:11128675-11128694 None:intergenic 25.0%
!!! TTATGGAGGAGATTATTTTA+AGG + chr1_4:11128692-11128711 None:intergenic 25.0%
!! TTGGTCATGAATCTAAATTT+TGG + chr1_4:11128824-11128843 None:intergenic 25.0%
!! TTGCAACAATATCACATTTT+TGG + chr1_4:11129104-11129123 None:intergenic 25.0%
!!! GTTTTGAAATATGTAGAATG+TGG - chr1_4:11129405-11129424 Msa0150000:intron 25.0%
!! CAATTTGTGTCTTTTATTGT+TGG - chr1_4:11129899-11129918 Msa0150000:intron 25.0%
! AGCTACTAAGAATTAAGATT+AGG - chr1_4:11130340-11130359 Msa0150000:five_prime_UTR 25.0%
!! TGATCATTTTTCTTGAGTGT+AGG - chr1_4:11126088-11126107 Msa0150000:three_prime_UTR 30.0%
TGAATTCAACAATTAGAGCT+CGG + chr1_4:11126203-11126222 None:intergenic 30.0%
TTAGATAAGCTAAGTGAAGA+TGG - chr1_4:11126703-11126722 Msa0150000:intron 30.0%
TACATAAGGAAATGCTAACA+AGG + chr1_4:11127399-11127418 None:intergenic 30.0%
!!! TGAGATGGAAGTTTTATTGA+GGG + chr1_4:11127550-11127569 None:intergenic 30.0%
!!! TTGAGATGGAAGTTTTATTG+AGG + chr1_4:11127551-11127570 None:intergenic 30.0%
ATGGTAATAAGCATCATGAA+AGG + chr1_4:11127637-11127656 None:intergenic 30.0%
TATTGTAGGGAATTTAAAGG+AGG + chr1_4:11127752-11127771 None:intergenic 30.0%
GACTATTGTAGGGAATTTAA+AGG + chr1_4:11127755-11127774 None:intergenic 30.0%
TTTATGCTTGGACTATTGTA+GGG + chr1_4:11127765-11127784 None:intergenic 30.0%
ATACTTGGTATCTTTATGCT+TGG + chr1_4:11127777-11127796 None:intergenic 30.0%
TCAGATCAAAGGTAATTGAA+AGG + chr1_4:11127809-11127828 None:intergenic 30.0%
TCTCTTATTCATCAGATCAA+AGG + chr1_4:11127820-11127839 None:intergenic 30.0%
AACCATATTATGTCATCCAA+TGG + chr1_4:11127894-11127913 None:intergenic 30.0%
AGGAAGTGATATTATACCAT+GGG + chr1_4:11127920-11127939 None:intergenic 30.0%
TAGGAAGTGATATTATACCA+TGG + chr1_4:11127921-11127940 None:intergenic 30.0%
TTTCAACTTGGTAGATACAT+CGG + chr1_4:11128003-11128022 None:intergenic 30.0%
TTTCTCGAATTCTTTCAACT+TGG + chr1_4:11128015-11128034 None:intergenic 30.0%
!!! ATGACTTTTAGTTTGGTGTT+GGG + chr1_4:11128131-11128150 None:intergenic 30.0%
!!! AATGACTTTTAGTTTGGTGT+TGG + chr1_4:11128132-11128151 None:intergenic 30.0%
GATATTATGCCACATCTTTA+CGG - chr1_4:11128154-11128173 Msa0150000:intron 30.0%
GAAATAAATCCGTAAAGATG+TGG + chr1_4:11128166-11128185 None:intergenic 30.0%
GATTTATTTCATAGCAACCT+TGG - chr1_4:11128176-11128195 Msa0150000:intron 30.0%
CAAATTATACCAAACTCAAC+GGG - chr1_4:11128286-11128305 Msa0150000:intron 30.0%
! TTTTATGTGCTATCACTCTA+GGG + chr1_4:11128337-11128356 None:intergenic 30.0%
! ATTTTATGTGCTATCACTCT+AGG + chr1_4:11128338-11128357 None:intergenic 30.0%
CACCTATTATTTGCATTATG+TGG + chr1_4:11128386-11128405 None:intergenic 30.0%
! ATGTGATAGAAATGGTTTGT+GGG + chr1_4:11128414-11128433 None:intergenic 30.0%
TTATTAAATTGTTCCCCCAA+AGG + chr1_4:11128442-11128461 None:intergenic 30.0%
AATGTCAACTTCAATCACAA+GGG - chr1_4:11128472-11128491 Msa0150000:intron 30.0%
ATATAACAAAGATACGATGG+AGG + chr1_4:11128564-11128583 None:intergenic 30.0%
! TCCATCGTATCTTTGTTATA+TGG - chr1_4:11128563-11128582 Msa0150000:intron 30.0%
! CCATCGTATCTTTGTTATAT+GGG - chr1_4:11128564-11128583 Msa0150000:intron 30.0%
! CATCGTATCTTTGTTATATG+GGG - chr1_4:11128565-11128584 Msa0150000:intron 30.0%
AGCTTAACTGATTACCAAAA+AGG + chr1_4:11128859-11128878 None:intergenic 30.0%
! AAGATTTCGGGTGAAAAAAA+AGG + chr1_4:11128945-11128964 None:intergenic 30.0%
!!! ATATCACATTTTTGGTTGCT+TGG + chr1_4:11129096-11129115 None:intergenic 30.0%
AACGAATCTCCTATATAAAC+CGG - chr1_4:11129209-11129228 Msa0150000:intron 30.0%
! TTTTTGTCTTGTGTTATCCA+AGG + chr1_4:11129270-11129289 None:intergenic 30.0%
ATCATGAAGATTATACCTCA+TGG + chr1_4:11129293-11129312 None:intergenic 30.0%
TGATGAACATAGATTCTTAG+AGG - chr1_4:11129309-11129328 Msa0150000:intron 30.0%
!! ATACTTTTTGTGTGAATGAG+GGG + chr1_4:11129367-11129386 None:intergenic 30.0%
!! GATACTTTTTGTGTGAATGA+GGG + chr1_4:11129368-11129387 None:intergenic 30.0%
! TTTGTGTTACTAATGAGTCA+GGG + chr1_4:11129442-11129461 None:intergenic 30.0%
! GACTTATTGGAGTTTGTTTA+TGG + chr1_4:11129564-11129583 None:intergenic 30.0%
ATACACTTAAAAGTGGAGTA+GGG - chr1_4:11129984-11130003 Msa0150000:intron 30.0%
CAACAAATCCAACCAAAATT+GGG + chr1_4:11130114-11130133 None:intergenic 30.0%
ACAACAAATCCAACCAAAAT+TGG + chr1_4:11130115-11130134 None:intergenic 30.0%
!!! ATTTTGGTTGGATTTGTTGT+AGG - chr1_4:11130115-11130134 Msa0150000:intron 30.0%
!!! TTTTGGTTGGATTTGTTGTA+GGG - chr1_4:11130116-11130135 Msa0150000:intron 30.0%
!! TGATCATTTTTCTTGAGTGT+AGG - chr1_4:11126088-11126107 Msa0150000:three_prime_UTR 30.0%
TGAATTCAACAATTAGAGCT+CGG + chr1_4:11126203-11126222 None:intergenic 30.0%
TTAGATAAGCTAAGTGAAGA+TGG - chr1_4:11126703-11126722 Msa0150000:intron 30.0%
TACATAAGGAAATGCTAACA+AGG + chr1_4:11127399-11127418 None:intergenic 30.0%
!!! TGAGATGGAAGTTTTATTGA+GGG + chr1_4:11127550-11127569 None:intergenic 30.0%
!!! TTGAGATGGAAGTTTTATTG+AGG + chr1_4:11127551-11127570 None:intergenic 30.0%
ATGGTAATAAGCATCATGAA+AGG + chr1_4:11127637-11127656 None:intergenic 30.0%
TATTGTAGGGAATTTAAAGG+AGG + chr1_4:11127752-11127771 None:intergenic 30.0%
GACTATTGTAGGGAATTTAA+AGG + chr1_4:11127755-11127774 None:intergenic 30.0%
TTTATGCTTGGACTATTGTA+GGG + chr1_4:11127765-11127784 None:intergenic 30.0%
ATACTTGGTATCTTTATGCT+TGG + chr1_4:11127777-11127796 None:intergenic 30.0%
TCAGATCAAAGGTAATTGAA+AGG + chr1_4:11127809-11127828 None:intergenic 30.0%
TCTCTTATTCATCAGATCAA+AGG + chr1_4:11127820-11127839 None:intergenic 30.0%
AACCATATTATGTCATCCAA+TGG + chr1_4:11127894-11127913 None:intergenic 30.0%
AGGAAGTGATATTATACCAT+GGG + chr1_4:11127920-11127939 None:intergenic 30.0%
TAGGAAGTGATATTATACCA+TGG + chr1_4:11127921-11127940 None:intergenic 30.0%
TTTCAACTTGGTAGATACAT+CGG + chr1_4:11128003-11128022 None:intergenic 30.0%
TTTCTCGAATTCTTTCAACT+TGG + chr1_4:11128015-11128034 None:intergenic 30.0%
!!! ATGACTTTTAGTTTGGTGTT+GGG + chr1_4:11128131-11128150 None:intergenic 30.0%
!!! AATGACTTTTAGTTTGGTGT+TGG + chr1_4:11128132-11128151 None:intergenic 30.0%
GATATTATGCCACATCTTTA+CGG - chr1_4:11128154-11128173 Msa0150000:intron 30.0%
GAAATAAATCCGTAAAGATG+TGG + chr1_4:11128166-11128185 None:intergenic 30.0%
GATTTATTTCATAGCAACCT+TGG - chr1_4:11128176-11128195 Msa0150000:intron 30.0%
CAAATTATACCAAACTCAAC+GGG - chr1_4:11128286-11128305 Msa0150000:intron 30.0%
! TTTTATGTGCTATCACTCTA+GGG + chr1_4:11128337-11128356 None:intergenic 30.0%
! ATTTTATGTGCTATCACTCT+AGG + chr1_4:11128338-11128357 None:intergenic 30.0%
CACCTATTATTTGCATTATG+TGG + chr1_4:11128386-11128405 None:intergenic 30.0%
! ATGTGATAGAAATGGTTTGT+GGG + chr1_4:11128414-11128433 None:intergenic 30.0%
TTATTAAATTGTTCCCCCAA+AGG + chr1_4:11128442-11128461 None:intergenic 30.0%
AATGTCAACTTCAATCACAA+GGG - chr1_4:11128472-11128491 Msa0150000:intron 30.0%
ATATAACAAAGATACGATGG+AGG + chr1_4:11128564-11128583 None:intergenic 30.0%
! TCCATCGTATCTTTGTTATA+TGG - chr1_4:11128563-11128582 Msa0150000:intron 30.0%
! CCATCGTATCTTTGTTATAT+GGG - chr1_4:11128564-11128583 Msa0150000:intron 30.0%
! CATCGTATCTTTGTTATATG+GGG - chr1_4:11128565-11128584 Msa0150000:intron 30.0%
AGCTTAACTGATTACCAAAA+AGG + chr1_4:11128859-11128878 None:intergenic 30.0%
! AAGATTTCGGGTGAAAAAAA+AGG + chr1_4:11128945-11128964 None:intergenic 30.0%
!!! ATATCACATTTTTGGTTGCT+TGG + chr1_4:11129096-11129115 None:intergenic 30.0%
AACGAATCTCCTATATAAAC+CGG - chr1_4:11129209-11129228 Msa0150000:intron 30.0%
! TTTTTGTCTTGTGTTATCCA+AGG + chr1_4:11129270-11129289 None:intergenic 30.0%
ATCATGAAGATTATACCTCA+TGG + chr1_4:11129293-11129312 None:intergenic 30.0%
TGATGAACATAGATTCTTAG+AGG - chr1_4:11129309-11129328 Msa0150000:intron 30.0%
!! ATACTTTTTGTGTGAATGAG+GGG + chr1_4:11129367-11129386 None:intergenic 30.0%
!! GATACTTTTTGTGTGAATGA+GGG + chr1_4:11129368-11129387 None:intergenic 30.0%
! TTTGTGTTACTAATGAGTCA+GGG + chr1_4:11129442-11129461 None:intergenic 30.0%
! GACTTATTGGAGTTTGTTTA+TGG + chr1_4:11129564-11129583 None:intergenic 30.0%
ATACACTTAAAAGTGGAGTA+GGG - chr1_4:11129984-11130003 Msa0150000:intron 30.0%
CAACAAATCCAACCAAAATT+GGG + chr1_4:11130114-11130133 None:intergenic 30.0%
ACAACAAATCCAACCAAAAT+TGG + chr1_4:11130115-11130134 None:intergenic 30.0%
!!! ATTTTGGTTGGATTTGTTGT+AGG - chr1_4:11130115-11130134 Msa0150000:intron 30.0%
!!! TTTTGGTTGGATTTGTTGTA+GGG - chr1_4:11130116-11130135 Msa0150000:intron 30.0%
! GGTTGTTCCTAAAGAGATTT+TGG + chr1_4:11126154-11126173 None:intergenic 35.0%
TGGGATGAAGTTAATAGTAG+AGG + chr1_4:11126317-11126336 None:intergenic 35.0%
TATGAAGTACGGATACTTCT+CGG - chr1_4:11126430-11126449 Msa0150000:CDS 35.0%
AGTAATCATAGATGTCGTGT+CGG + chr1_4:11126486-11126505 None:intergenic 35.0%
AAGTTATTAGCTAGGAAGCA+CGG + chr1_4:11126583-11126602 None:intergenic 35.0%
CTAAGTGAAGATGGTTTAGT+GGG - chr1_4:11126712-11126731 Msa0150000:intron 35.0%
!!! GGGATTATTTTTTGTGGCTA+TGG - chr1_4:11126732-11126751 Msa0150000:intron 35.0%
ATAAAAGATAGAACGGACGA+CGG + chr1_4:11126860-11126879 None:intergenic 35.0%
! TCGTCCGTTCTATCTTTTAT+TGG - chr1_4:11126860-11126879 Msa0150000:intron 35.0%
TATCTTCTTCATTACCTCAC+TGG - chr1_4:11126916-11126935 Msa0150000:intron 35.0%
CAAAGAAAACTACCCAAGAA+TGG - chr1_4:11127439-11127458 Msa0150000:intron 35.0%
!!! GAGATGGAAGTTTTATTGAG+GGG + chr1_4:11127549-11127568 None:intergenic 35.0%
!!! ATTTTTGAGGTGAACGTTAG+GGG + chr1_4:11127599-11127618 None:intergenic 35.0%
!!! CATTTTTGAGGTGAACGTTA+GGG + chr1_4:11127600-11127619 None:intergenic 35.0%
!!! ACATTTTTGAGGTGAACGTT+AGG + chr1_4:11127601-11127620 None:intergenic 35.0%
TCACCTCAAAAATGTCTGAA+AGG - chr1_4:11127606-11127625 Msa0150000:intron 35.0%
! GTTCCTTTCAGACATTTTTG+AGG + chr1_4:11127612-11127631 None:intergenic 35.0%
ATTTGTTTGCTTTCGTGTCA+TGG + chr1_4:11127656-11127675 None:intergenic 35.0%
ATTCTATTCATGCTCAATCC+TGG - chr1_4:11127691-11127710 Msa0150000:intron 35.0%
CTAAAGCATATGACATCGTT+CGG + chr1_4:11127726-11127745 None:intergenic 35.0%
CTTTATGCTTGGACTATTGT+AGG + chr1_4:11127766-11127785 None:intergenic 35.0%
GAAAGGTTCTTCTTCATACT+TGG + chr1_4:11127792-11127811 None:intergenic 35.0%
TGCAATAAGGCAACTCTATT+GGG + chr1_4:11127869-11127888 None:intergenic 35.0%
CTCCATTGGATGACATAATA+TGG - chr1_4:11127889-11127908 Msa0150000:intron 35.0%
ACATAATATGGTTATCCCCA+TGG - chr1_4:11127901-11127920 Msa0150000:intron 35.0%
GGAAGTGATATTATACCATG+GGG + chr1_4:11127919-11127938 None:intergenic 35.0%
AAACTCAACCCGTAAAGAAA+TGG - chr1_4:11127950-11127969 Msa0150000:intron 35.0%
!!! TGACTTTTAGTTTGGTGTTG+GGG + chr1_4:11128130-11128149 None:intergenic 35.0%
TTATTGCAGTAGGTACTAGT+TGG + chr1_4:11128215-11128234 None:intergenic 35.0%
AACTAGTACCTACTGCAATA+AGG - chr1_4:11128214-11128233 Msa0150000:intron 35.0%
! TCTAGGGTTAACTTATGGAT+AGG + chr1_4:11128321-11128340 None:intergenic 35.0%
!! ATCACTCTAGGGTTAACTTA+TGG + chr1_4:11128326-11128345 None:intergenic 35.0%
!!! ATGTGGAAAAGGTTTTGTTC+TGG + chr1_4:11128369-11128388 None:intergenic 35.0%
CATGTGATAGAAATGGTTTG+TGG + chr1_4:11128415-11128434 None:intergenic 35.0%
AGGACATCATGTGATAGAAA+TGG + chr1_4:11128422-11128441 None:intergenic 35.0%
TTCTATCACATGATGTCCTT+TGG - chr1_4:11128423-11128442 Msa0150000:intron 35.0%
TCTATCACATGATGTCCTTT+GGG - chr1_4:11128424-11128443 Msa0150000:intron 35.0%
TTGAAGTTGACATTGTTCTC+AGG + chr1_4:11128466-11128485 None:intergenic 35.0%
CAATGTCAACTTCAATCACA+AGG - chr1_4:11128471-11128490 Msa0150000:intron 35.0%
ATGTCAACTTCAATCACAAG+GGG - chr1_4:11128473-11128492 Msa0150000:intron 35.0%
AAGGGGAGCTACAAAAATTA+TGG - chr1_4:11128490-11128509 Msa0150000:intron 35.0%
GCTACAAAAATTATGGTGGT+TGG - chr1_4:11128497-11128516 Msa0150000:intron 35.0%
! AAAAATTATGGTGGTTGGCT+TGG - chr1_4:11128502-11128521 Msa0150000:intron 35.0%
CCCATATAACAAAGATACGA+TGG + chr1_4:11128567-11128586 None:intergenic 35.0%
! TATTTTCGTAAGGTTGCAGA+TGG + chr1_4:11128635-11128654 None:intergenic 35.0%
CTTTAAGCCTCTTAATCTGT+TGG + chr1_4:11128730-11128749 None:intergenic 35.0%
TTCATGACCAAGAGTAATTG+AGG - chr1_4:11128833-11128852 Msa0150000:intron 35.0%
AAAAAGGCCTCAATTACTCT+TGG + chr1_4:11128843-11128862 None:intergenic 35.0%
! AAGAGTAATTGAGGCCTTTT+TGG - chr1_4:11128842-11128861 Msa0150000:intron 35.0%
!!! TTTTTTCACCCGAAATCTTG+AGG - chr1_4:11128946-11128965 Msa0150000:intron 35.0%
AATGTGTGTTCGGAGATTAT+GGG + chr1_4:11129030-11129049 None:intergenic 35.0%
! AAGTTGGTTGAATGTGTGTT+CGG + chr1_4:11129040-11129059 None:intergenic 35.0%
CTAAATATATGGAGAGTAGC+GGG + chr1_4:11129073-11129092 None:intergenic 35.0%
GCTAAATATATGGAGAGTAG+CGG + chr1_4:11129074-11129093 None:intergenic 35.0%
TGGTTGCTTGGCTAAATATA+TGG + chr1_4:11129084-11129103 None:intergenic 35.0%
!!! CATTACAGGTTTTAAAGCCT+CGG + chr1_4:11129163-11129182 None:intergenic 35.0%
AACACAAGACAAAAACCATG+AGG - chr1_4:11129275-11129294 Msa0150000:intron 35.0%
!! CGATACTTTTTGTGTGAATG+AGG + chr1_4:11129369-11129388 None:intergenic 35.0%
!! CATTCACACAAAAAGTATCG+AGG - chr1_4:11129369-11129388 Msa0150000:intron 35.0%
! TTGTGTTACTAATGAGTCAG+GGG + chr1_4:11129441-11129460 None:intergenic 35.0%
! GTTTGTGTTACTAATGAGTC+AGG + chr1_4:11129443-11129462 None:intergenic 35.0%
ACTCATTAGTAACACAAACC+AGG - chr1_4:11129444-11129463 Msa0150000:intron 35.0%
ATAGTTGAGCAATGGATGTT+TGG + chr1_4:11129521-11129540 None:intergenic 35.0%
TGGTGTTTGAAAAGTCTATG+AGG + chr1_4:11129544-11129563 None:intergenic 35.0%
GAGAAGAACTCAAGACTTAT+TGG + chr1_4:11129577-11129596 None:intergenic 35.0%
TATAGTGCTTCATCTTAAGG+CGG + chr1_4:11129636-11129655 None:intergenic 35.0%
TCGTATAGTGCTTCATCTTA+AGG + chr1_4:11129639-11129658 None:intergenic 35.0%
AACATCTTTACTCCCTTCTA+TGG - chr1_4:11129661-11129680 Msa0150000:CDS 35.0%
!! CCACTTTTAAGTGTATGAAC+TGG + chr1_4:11129980-11129999 None:intergenic 35.0%
CCAGTTCATACACTTAAAAG+TGG - chr1_4:11129977-11129996 Msa0150000:intron 35.0%
CATACACTTAAAAGTGGAGT+AGG - chr1_4:11129983-11130002 Msa0150000:intron 35.0%
ACTATGGTTGATCCAAAGAA+AGG - chr1_4:11130070-11130089 Msa0150000:intron 35.0%
!! TTTGGTTGGATTTGTTGTAG+GGG - chr1_4:11130117-11130136 Msa0150000:intron 35.0%
AAAAGATCTTGCTGGATTCA+TGG + chr1_4:11130179-11130198 None:intergenic 35.0%
! ATGAATCCAGCAAGATCTTT+TGG - chr1_4:11130178-11130197 Msa0150000:intron 35.0%
! GGTTGTTCCTAAAGAGATTT+TGG + chr1_4:11126154-11126173 None:intergenic 35.0%
TGGGATGAAGTTAATAGTAG+AGG + chr1_4:11126317-11126336 None:intergenic 35.0%
TATGAAGTACGGATACTTCT+CGG - chr1_4:11126430-11126449 Msa0150000:CDS 35.0%
AGTAATCATAGATGTCGTGT+CGG + chr1_4:11126486-11126505 None:intergenic 35.0%
AAGTTATTAGCTAGGAAGCA+CGG + chr1_4:11126583-11126602 None:intergenic 35.0%
CTAAGTGAAGATGGTTTAGT+GGG - chr1_4:11126712-11126731 Msa0150000:intron 35.0%
!!! GGGATTATTTTTTGTGGCTA+TGG - chr1_4:11126732-11126751 Msa0150000:intron 35.0%
ATAAAAGATAGAACGGACGA+CGG + chr1_4:11126860-11126879 None:intergenic 35.0%
! TCGTCCGTTCTATCTTTTAT+TGG - chr1_4:11126860-11126879 Msa0150000:intron 35.0%
TATCTTCTTCATTACCTCAC+TGG - chr1_4:11126916-11126935 Msa0150000:intron 35.0%
CAAAGAAAACTACCCAAGAA+TGG - chr1_4:11127439-11127458 Msa0150000:intron 35.0%
!!! GAGATGGAAGTTTTATTGAG+GGG + chr1_4:11127549-11127568 None:intergenic 35.0%
!!! ATTTTTGAGGTGAACGTTAG+GGG + chr1_4:11127599-11127618 None:intergenic 35.0%
!!! CATTTTTGAGGTGAACGTTA+GGG + chr1_4:11127600-11127619 None:intergenic 35.0%
!!! ACATTTTTGAGGTGAACGTT+AGG + chr1_4:11127601-11127620 None:intergenic 35.0%
TCACCTCAAAAATGTCTGAA+AGG - chr1_4:11127606-11127625 Msa0150000:intron 35.0%
! GTTCCTTTCAGACATTTTTG+AGG + chr1_4:11127612-11127631 None:intergenic 35.0%
ATTTGTTTGCTTTCGTGTCA+TGG + chr1_4:11127656-11127675 None:intergenic 35.0%
ATTCTATTCATGCTCAATCC+TGG - chr1_4:11127691-11127710 Msa0150000:intron 35.0%
CTAAAGCATATGACATCGTT+CGG + chr1_4:11127726-11127745 None:intergenic 35.0%
CTTTATGCTTGGACTATTGT+AGG + chr1_4:11127766-11127785 None:intergenic 35.0%
GAAAGGTTCTTCTTCATACT+TGG + chr1_4:11127792-11127811 None:intergenic 35.0%
TGCAATAAGGCAACTCTATT+GGG + chr1_4:11127869-11127888 None:intergenic 35.0%
CTCCATTGGATGACATAATA+TGG - chr1_4:11127889-11127908 Msa0150000:intron 35.0%
ACATAATATGGTTATCCCCA+TGG - chr1_4:11127901-11127920 Msa0150000:intron 35.0%
GGAAGTGATATTATACCATG+GGG + chr1_4:11127919-11127938 None:intergenic 35.0%
AAACTCAACCCGTAAAGAAA+TGG - chr1_4:11127950-11127969 Msa0150000:intron 35.0%
!!! TGACTTTTAGTTTGGTGTTG+GGG + chr1_4:11128130-11128149 None:intergenic 35.0%
TTATTGCAGTAGGTACTAGT+TGG + chr1_4:11128215-11128234 None:intergenic 35.0%
AACTAGTACCTACTGCAATA+AGG - chr1_4:11128214-11128233 Msa0150000:intron 35.0%
! TCTAGGGTTAACTTATGGAT+AGG + chr1_4:11128321-11128340 None:intergenic 35.0%
!! ATCACTCTAGGGTTAACTTA+TGG + chr1_4:11128326-11128345 None:intergenic 35.0%
!!! ATGTGGAAAAGGTTTTGTTC+TGG + chr1_4:11128369-11128388 None:intergenic 35.0%
CATGTGATAGAAATGGTTTG+TGG + chr1_4:11128415-11128434 None:intergenic 35.0%
AGGACATCATGTGATAGAAA+TGG + chr1_4:11128422-11128441 None:intergenic 35.0%
TTCTATCACATGATGTCCTT+TGG - chr1_4:11128423-11128442 Msa0150000:intron 35.0%
TCTATCACATGATGTCCTTT+GGG - chr1_4:11128424-11128443 Msa0150000:intron 35.0%
TTGAAGTTGACATTGTTCTC+AGG + chr1_4:11128466-11128485 None:intergenic 35.0%
CAATGTCAACTTCAATCACA+AGG - chr1_4:11128471-11128490 Msa0150000:intron 35.0%
ATGTCAACTTCAATCACAAG+GGG - chr1_4:11128473-11128492 Msa0150000:intron 35.0%
AAGGGGAGCTACAAAAATTA+TGG - chr1_4:11128490-11128509 Msa0150000:intron 35.0%
GCTACAAAAATTATGGTGGT+TGG - chr1_4:11128497-11128516 Msa0150000:intron 35.0%
! AAAAATTATGGTGGTTGGCT+TGG - chr1_4:11128502-11128521 Msa0150000:intron 35.0%
CCCATATAACAAAGATACGA+TGG + chr1_4:11128567-11128586 None:intergenic 35.0%
! TATTTTCGTAAGGTTGCAGA+TGG + chr1_4:11128635-11128654 None:intergenic 35.0%
CTTTAAGCCTCTTAATCTGT+TGG + chr1_4:11128730-11128749 None:intergenic 35.0%
TTCATGACCAAGAGTAATTG+AGG - chr1_4:11128833-11128852 Msa0150000:intron 35.0%
AAAAAGGCCTCAATTACTCT+TGG + chr1_4:11128843-11128862 None:intergenic 35.0%
! AAGAGTAATTGAGGCCTTTT+TGG - chr1_4:11128842-11128861 Msa0150000:intron 35.0%
!!! TTTTTTCACCCGAAATCTTG+AGG - chr1_4:11128946-11128965 Msa0150000:intron 35.0%
AATGTGTGTTCGGAGATTAT+GGG + chr1_4:11129030-11129049 None:intergenic 35.0%
! AAGTTGGTTGAATGTGTGTT+CGG + chr1_4:11129040-11129059 None:intergenic 35.0%
CTAAATATATGGAGAGTAGC+GGG + chr1_4:11129073-11129092 None:intergenic 35.0%
GCTAAATATATGGAGAGTAG+CGG + chr1_4:11129074-11129093 None:intergenic 35.0%
TGGTTGCTTGGCTAAATATA+TGG + chr1_4:11129084-11129103 None:intergenic 35.0%
!!! CATTACAGGTTTTAAAGCCT+CGG + chr1_4:11129163-11129182 None:intergenic 35.0%
AACACAAGACAAAAACCATG+AGG - chr1_4:11129275-11129294 Msa0150000:intron 35.0%
!! CGATACTTTTTGTGTGAATG+AGG + chr1_4:11129369-11129388 None:intergenic 35.0%
!! CATTCACACAAAAAGTATCG+AGG - chr1_4:11129369-11129388 Msa0150000:intron 35.0%
! TTGTGTTACTAATGAGTCAG+GGG + chr1_4:11129441-11129460 None:intergenic 35.0%
! GTTTGTGTTACTAATGAGTC+AGG + chr1_4:11129443-11129462 None:intergenic 35.0%
ACTCATTAGTAACACAAACC+AGG - chr1_4:11129444-11129463 Msa0150000:intron 35.0%
ATAGTTGAGCAATGGATGTT+TGG + chr1_4:11129521-11129540 None:intergenic 35.0%
TGGTGTTTGAAAAGTCTATG+AGG + chr1_4:11129544-11129563 None:intergenic 35.0%
GAGAAGAACTCAAGACTTAT+TGG + chr1_4:11129577-11129596 None:intergenic 35.0%
TATAGTGCTTCATCTTAAGG+CGG + chr1_4:11129636-11129655 None:intergenic 35.0%
TCGTATAGTGCTTCATCTTA+AGG + chr1_4:11129639-11129658 None:intergenic 35.0%
AACATCTTTACTCCCTTCTA+TGG - chr1_4:11129661-11129680 Msa0150000:CDS 35.0%
!! CCACTTTTAAGTGTATGAAC+TGG + chr1_4:11129980-11129999 None:intergenic 35.0%
CCAGTTCATACACTTAAAAG+TGG - chr1_4:11129977-11129996 Msa0150000:intron 35.0%
CATACACTTAAAAGTGGAGT+AGG - chr1_4:11129983-11130002 Msa0150000:intron 35.0%
ACTATGGTTGATCCAAAGAA+AGG - chr1_4:11130070-11130089 Msa0150000:intron 35.0%
!! TTTGGTTGGATTTGTTGTAG+GGG - chr1_4:11130117-11130136 Msa0150000:intron 35.0%
AAAAGATCTTGCTGGATTCA+TGG + chr1_4:11130179-11130198 None:intergenic 35.0%
! ATGAATCCAGCAAGATCTTT+TGG - chr1_4:11130178-11130197 Msa0150000:intron 35.0%
!! ATTAGGTTGAGTAGCCTCTT+GGG + chr1_4:11126175-11126194 None:intergenic 40.0%
!! AATTAGGTTGAGTAGCCTCT+TGG + chr1_4:11126176-11126195 None:intergenic 40.0%
ATTAGAGCTCGGATGCAATT+AGG + chr1_4:11126192-11126211 None:intergenic 40.0%
ACCTTTCTCTTTGTCTTTGC+TGG - chr1_4:11126228-11126247 Msa0150000:CDS 40.0%
ACCAGCAAAGACAAAGAGAA+AGG + chr1_4:11126232-11126251 None:intergenic 40.0%
!! TGCTGGTGTTGGTTCAAAAA+TGG - chr1_4:11126245-11126264 Msa0150000:CDS 40.0%
!! GAGAAGTATCCGTACTTCAT+AGG + chr1_4:11126431-11126450 None:intergenic 40.0%
ACGGACACAAATATGGATAC+TGG + chr1_4:11126564-11126583 None:intergenic 40.0%
GCTAAGTGAAGATGGTTTAG+TGG - chr1_4:11126711-11126730 Msa0150000:intron 40.0%
GATCAACATATAGCATCTGC+AGG - chr1_4:11126886-11126905 Msa0150000:intron 40.0%
GAGCTTCATCTTCCATTCTT+GGG + chr1_4:11127454-11127473 None:intergenic 40.0%
TGAGCTTCATCTTCCATTCT+TGG + chr1_4:11127455-11127474 None:intergenic 40.0%
!!! GGAAGTTTTATTGAGGGGTT+GGG + chr1_4:11127544-11127563 None:intergenic 40.0%
!!! TGGAAGTTTTATTGAGGGGT+TGG + chr1_4:11127545-11127564 None:intergenic 40.0%
TGTAGGGAATTTAAAGGAGG+TGG + chr1_4:11127749-11127768 None:intergenic 40.0%
GTGCAATAAGGCAACTCTAT+TGG + chr1_4:11127870-11127889 None:intergenic 40.0%
TCATCCAATGGAGTGCAATA+AGG + chr1_4:11127882-11127901 None:intergenic 40.0%
TCAACCCGTAAAGAAATGGA+TGG - chr1_4:11127954-11127973 Msa0150000:intron 40.0%
CAACCCGTAAAGAAATGGAT+GGG - chr1_4:11127955-11127974 Msa0150000:intron 40.0%
ATGCCCATCCATTTCTTTAC+GGG + chr1_4:11127961-11127980 None:intergenic 40.0%
GATGCCCATCCATTTCTTTA+CGG + chr1_4:11127962-11127981 None:intergenic 40.0%
AATAAGATGCCCGTTGAGTT+TGG + chr1_4:11128298-11128317 None:intergenic 40.0%
CTATCACATGATGTCCTTTG+GGG - chr1_4:11128425-11128444 Msa0150000:intron 40.0%
TATCACATGATGTCCTTTGG+GGG - chr1_4:11128426-11128445 Msa0150000:intron 40.0%
GGGAGCTACAAAAATTATGG+TGG - chr1_4:11128493-11128512 Msa0150000:intron 40.0%
! CAAAGATACGATGGAGGTTT+TGG + chr1_4:11128558-11128577 None:intergenic 40.0%
!! ACAATGACTGTGAAGGTGTT+GGG + chr1_4:11128605-11128624 None:intergenic 40.0%
ACACTTCACAATGACTGTGA+AGG + chr1_4:11128612-11128631 None:intergenic 40.0%
!! GTTTTAGGCCTCAAGATTTC+GGG + chr1_4:11128957-11128976 None:intergenic 40.0%
!!! GGTTTTAGGCCTCAAGATTT+CGG + chr1_4:11128958-11128977 None:intergenic 40.0%
TTCGGAGATTATGGGCAATA+TGG + chr1_4:11129022-11129041 None:intergenic 40.0%
GAATGTGTGTTCGGAGATTA+TGG + chr1_4:11129031-11129050 None:intergenic 40.0%
GAACACACATTCAACCAACT+TGG - chr1_4:11129039-11129058 Msa0150000:intron 40.0%
AAAACCTGTAATGTTCGACG+AGG - chr1_4:11129170-11129189 Msa0150000:intron 40.0%
! CATGCTAAGCCGGTTTATAT+AGG + chr1_4:11129221-11129240 None:intergenic 40.0%
ATATCATGTGCATGCTAAGC+CGG + chr1_4:11129231-11129250 None:intergenic 40.0%
CTTAGCATGCACATGATATG+AGG - chr1_4:11129232-11129251 Msa0150000:intron 40.0%
TCTTAGAGGACATTCCCTAA+CGG - chr1_4:11129323-11129342 Msa0150000:intron 40.0%
! TTTTGGATGCAAGACCGTTA+GGG + chr1_4:11129340-11129359 None:intergenic 40.0%
! GTATCGAGGTCTTTTCTAGA+TGG - chr1_4:11129383-11129402 Msa0150000:intron 40.0%
TAACACAAACCAGGTCATCA+AGG - chr1_4:11129453-11129472 Msa0150000:intron 40.0%
TTGAGCAATGGATGTTTGGA+AGG + chr1_4:11129517-11129536 None:intergenic 40.0%
CTATGAGGATAGTTGAGCAA+TGG + chr1_4:11129529-11129548 None:intergenic 40.0%
GTGTACTCAAGGAGTAGTTT+GGG - chr1_4:11130006-11130025 Msa0150000:intron 40.0%
GTTCACTGTGTATGCAACTA+TGG - chr1_4:11130054-11130073 Msa0150000:intron 40.0%
ATGGTTGATCCAAAGAAAGG+AGG - chr1_4:11130073-11130092 Msa0150000:intron 40.0%
! AAGATCTTTTGGACCTGCTT+TGG - chr1_4:11130189-11130208 Msa0150000:intron 40.0%
CAATTTCCACTAACCAAAGC+AGG + chr1_4:11130205-11130224 None:intergenic 40.0%
CTGCTTTGGTTAGTGGAAAT+TGG - chr1_4:11130203-11130222 Msa0150000:CDS 40.0%
TGGAAATTGGACTGACCAAT+GGG - chr1_4:11130216-11130235 Msa0150000:CDS 40.0%
!!! GACTGACCAATGGGTTTTTT+GGG - chr1_4:11130225-11130244 Msa0150000:CDS 40.0%
!!! ACCAATGGGTTTTTTGGGTT+GGG - chr1_4:11130230-11130249 Msa0150000:CDS 40.0%
AGTAGCTTTCTTCATCCACA+AGG + chr1_4:11130327-11130346 None:intergenic 40.0%
TGATTAGATGTTCCTCTGCT+TGG - chr1_4:11130410-11130429 Msa0150000:five_prime_UTR 40.0%
GATTAGATGTTCCTCTGCTT+GGG - chr1_4:11130411-11130430 Msa0150000:five_prime_UTR 40.0%
!! ATTAGGTTGAGTAGCCTCTT+GGG + chr1_4:11126175-11126194 None:intergenic 40.0%
!! AATTAGGTTGAGTAGCCTCT+TGG + chr1_4:11126176-11126195 None:intergenic 40.0%
ATTAGAGCTCGGATGCAATT+AGG + chr1_4:11126192-11126211 None:intergenic 40.0%
ACCTTTCTCTTTGTCTTTGC+TGG - chr1_4:11126228-11126247 Msa0150000:CDS 40.0%
ACCAGCAAAGACAAAGAGAA+AGG + chr1_4:11126232-11126251 None:intergenic 40.0%
!! TGCTGGTGTTGGTTCAAAAA+TGG - chr1_4:11126245-11126264 Msa0150000:CDS 40.0%
!! GAGAAGTATCCGTACTTCAT+AGG + chr1_4:11126431-11126450 None:intergenic 40.0%
ACGGACACAAATATGGATAC+TGG + chr1_4:11126564-11126583 None:intergenic 40.0%
GCTAAGTGAAGATGGTTTAG+TGG - chr1_4:11126711-11126730 Msa0150000:intron 40.0%
GATCAACATATAGCATCTGC+AGG - chr1_4:11126886-11126905 Msa0150000:intron 40.0%
GAGCTTCATCTTCCATTCTT+GGG + chr1_4:11127454-11127473 None:intergenic 40.0%
TGAGCTTCATCTTCCATTCT+TGG + chr1_4:11127455-11127474 None:intergenic 40.0%
!!! GGAAGTTTTATTGAGGGGTT+GGG + chr1_4:11127544-11127563 None:intergenic 40.0%
!!! TGGAAGTTTTATTGAGGGGT+TGG + chr1_4:11127545-11127564 None:intergenic 40.0%
TGTAGGGAATTTAAAGGAGG+TGG + chr1_4:11127749-11127768 None:intergenic 40.0%
GTGCAATAAGGCAACTCTAT+TGG + chr1_4:11127870-11127889 None:intergenic 40.0%
TCATCCAATGGAGTGCAATA+AGG + chr1_4:11127882-11127901 None:intergenic 40.0%
TCAACCCGTAAAGAAATGGA+TGG - chr1_4:11127954-11127973 Msa0150000:intron 40.0%
CAACCCGTAAAGAAATGGAT+GGG - chr1_4:11127955-11127974 Msa0150000:intron 40.0%
ATGCCCATCCATTTCTTTAC+GGG + chr1_4:11127961-11127980 None:intergenic 40.0%
GATGCCCATCCATTTCTTTA+CGG + chr1_4:11127962-11127981 None:intergenic 40.0%
AATAAGATGCCCGTTGAGTT+TGG + chr1_4:11128298-11128317 None:intergenic 40.0%
CTATCACATGATGTCCTTTG+GGG - chr1_4:11128425-11128444 Msa0150000:intron 40.0%
TATCACATGATGTCCTTTGG+GGG - chr1_4:11128426-11128445 Msa0150000:intron 40.0%
GGGAGCTACAAAAATTATGG+TGG - chr1_4:11128493-11128512 Msa0150000:intron 40.0%
! CAAAGATACGATGGAGGTTT+TGG + chr1_4:11128558-11128577 None:intergenic 40.0%
!! ACAATGACTGTGAAGGTGTT+GGG + chr1_4:11128605-11128624 None:intergenic 40.0%
ACACTTCACAATGACTGTGA+AGG + chr1_4:11128612-11128631 None:intergenic 40.0%
!! GTTTTAGGCCTCAAGATTTC+GGG + chr1_4:11128957-11128976 None:intergenic 40.0%
!!! GGTTTTAGGCCTCAAGATTT+CGG + chr1_4:11128958-11128977 None:intergenic 40.0%
TTCGGAGATTATGGGCAATA+TGG + chr1_4:11129022-11129041 None:intergenic 40.0%
GAATGTGTGTTCGGAGATTA+TGG + chr1_4:11129031-11129050 None:intergenic 40.0%
GAACACACATTCAACCAACT+TGG - chr1_4:11129039-11129058 Msa0150000:intron 40.0%
AAAACCTGTAATGTTCGACG+AGG - chr1_4:11129170-11129189 Msa0150000:intron 40.0%
! CATGCTAAGCCGGTTTATAT+AGG + chr1_4:11129221-11129240 None:intergenic 40.0%
ATATCATGTGCATGCTAAGC+CGG + chr1_4:11129231-11129250 None:intergenic 40.0%
CTTAGCATGCACATGATATG+AGG - chr1_4:11129232-11129251 Msa0150000:intron 40.0%
TCTTAGAGGACATTCCCTAA+CGG - chr1_4:11129323-11129342 Msa0150000:intron 40.0%
! TTTTGGATGCAAGACCGTTA+GGG + chr1_4:11129340-11129359 None:intergenic 40.0%
! GTATCGAGGTCTTTTCTAGA+TGG - chr1_4:11129383-11129402 Msa0150000:intron 40.0%
TAACACAAACCAGGTCATCA+AGG - chr1_4:11129453-11129472 Msa0150000:intron 40.0%
TTGAGCAATGGATGTTTGGA+AGG + chr1_4:11129517-11129536 None:intergenic 40.0%
CTATGAGGATAGTTGAGCAA+TGG + chr1_4:11129529-11129548 None:intergenic 40.0%
GTGTACTCAAGGAGTAGTTT+GGG - chr1_4:11130006-11130025 Msa0150000:intron 40.0%
GTTCACTGTGTATGCAACTA+TGG - chr1_4:11130054-11130073 Msa0150000:intron 40.0%
ATGGTTGATCCAAAGAAAGG+AGG - chr1_4:11130073-11130092 Msa0150000:intron 40.0%
! AAGATCTTTTGGACCTGCTT+TGG - chr1_4:11130189-11130208 Msa0150000:intron 40.0%
CAATTTCCACTAACCAAAGC+AGG + chr1_4:11130205-11130224 None:intergenic 40.0%
CTGCTTTGGTTAGTGGAAAT+TGG - chr1_4:11130203-11130222 Msa0150000:CDS 40.0%
TGGAAATTGGACTGACCAAT+GGG - chr1_4:11130216-11130235 Msa0150000:CDS 40.0%
!!! GACTGACCAATGGGTTTTTT+GGG - chr1_4:11130225-11130244 Msa0150000:CDS 40.0%
!!! ACCAATGGGTTTTTTGGGTT+GGG - chr1_4:11130230-11130249 Msa0150000:CDS 40.0%
AGTAGCTTTCTTCATCCACA+AGG + chr1_4:11130327-11130346 None:intergenic 40.0%
TGATTAGATGTTCCTCTGCT+TGG - chr1_4:11130410-11130429 Msa0150000:five_prime_UTR 40.0%
GATTAGATGTTCCTCTGCTT+GGG - chr1_4:11130411-11130430 Msa0150000:five_prime_UTR 40.0%
! CTCTTTAGGAACAACCCAAG+AGG - chr1_4:11126158-11126177 Msa0150000:CDS 45.0%
CTCTTTGTCTTTGCTGGTGT+TGG - chr1_4:11126234-11126253 Msa0150000:CDS 45.0%
! GTTGGTTCAAAAATGGCTGC+TGG - chr1_4:11126252-11126271 Msa0150000:CDS 45.0%
GTACGGATACTTCTCGGATT+AGG - chr1_4:11126436-11126455 Msa0150000:CDS 45.0%
!! TTCTCGGATTAGGAGTGTTC+TGG - chr1_4:11126446-11126465 Msa0150000:CDS 45.0%
TATGGATACTGGACACGACA+CGG + chr1_4:11126553-11126572 None:intergenic 45.0%
! AGGAAGCACGGACACAAATA+TGG + chr1_4:11126571-11126590 None:intergenic 45.0%
TATGGCACAAACTCTTCTGG+TGG - chr1_4:11126750-11126769 Msa0150000:intron 45.0%
CTTCTTCATTACCTCACTGG+TGG - chr1_4:11126919-11126938 Msa0150000:intron 45.0%
CACTTACTAATCCACCAGTG+AGG + chr1_4:11126933-11126952 None:intergenic 45.0%
GGAAGATGAAGCTCATTCTG+AGG - chr1_4:11127460-11127479 Msa0150000:intron 45.0%
ACGTTAGGGGTGAAATTGCT+CGG + chr1_4:11127586-11127605 None:intergenic 45.0%
ATTCATGCTCAATCCTGGCA+CGG - chr1_4:11127696-11127715 Msa0150000:intron 45.0%
GAGTGTAACGCAAGAGCAAA+AGG - chr1_4:11127838-11127857 Msa0150000:intron 45.0%
! GTTGCCTTATTGCACTCCAT+TGG - chr1_4:11127875-11127894 Msa0150000:intron 45.0%
TTGAGCTAGTGACATGGAGA+TGG + chr1_4:11128062-11128081 None:intergenic 45.0%
! ATGGTGTTGAGCTAGTGACA+TGG + chr1_4:11128068-11128087 None:intergenic 45.0%
!! TAGTTTGGTGTTGGGGTTTC+AGG + chr1_4:11128123-11128142 None:intergenic 45.0%
TTGCAGTAGGTACTAGTTGG+AGG + chr1_4:11128212-11128231 None:intergenic 45.0%
! TAGCTTTTGCACCCTTGACA+CGG + chr1_4:11128266-11128285 None:intergenic 45.0%
!! AATTATGGTGGTTGGCTTGG+AGG - chr1_4:11128505-11128524 Msa0150000:intron 45.0%
!! ATTATGGTGGTTGGCTTGGA+GGG - chr1_4:11128506-11128525 Msa0150000:intron 45.0%
!! AGATACGATGGAGGTTTTGG+AGG + chr1_4:11128555-11128574 None:intergenic 45.0%
!! CAATGACTGTGAAGGTGTTG+GGG + chr1_4:11128604-11128623 None:intergenic 45.0%
! CACAATGACTGTGAAGGTGT+TGG + chr1_4:11128606-11128625 None:intergenic 45.0%
AATCTCCTCCATAACTCACC+AGG - chr1_4:11128698-11128717 Msa0150000:intron 45.0%
ATCTCCTCCATAACTCACCA+GGG - chr1_4:11128699-11128718 Msa0150000:intron 45.0%
TGGGCAATATGGTGTGAGTA+GGG + chr1_4:11129011-11129030 None:intergenic 45.0%
ATGGGCAATATGGTGTGAGT+AGG + chr1_4:11129012-11129031 None:intergenic 45.0%
! AATATATGGAGAGTAGCGGG+TGG + chr1_4:11129070-11129089 None:intergenic 45.0%
!!! AGGTTTTAAAGCCTCGGACT+AGG + chr1_4:11129157-11129176 None:intergenic 45.0%
AATGTTCGACGAGGAAGCAA+TGG - chr1_4:11129179-11129198 Msa0150000:intron 45.0%
!! TGAGGCATCTTTTGATGCCT+TGG - chr1_4:11129250-11129269 Msa0150000:intron 45.0%
!! GTTTTGGATGCAAGACCGTT+AGG + chr1_4:11129341-11129360 None:intergenic 45.0%
! TTTTTGTGTGAATGAGGGGC+TGG + chr1_4:11129363-11129382 None:intergenic 45.0%
TACTCCCTTCTATGGCATCT+AGG - chr1_4:11129669-11129688 Msa0150000:CDS 45.0%
GTTGCCTAGATGCCATAGAA+GGG + chr1_4:11129676-11129695 None:intergenic 45.0%
TGTTGCCTAGATGCCATAGA+AGG + chr1_4:11129677-11129696 None:intergenic 45.0%
! AGATTTTCAGTGTCCGTTCC+GGG + chr1_4:11129707-11129726 None:intergenic 45.0%
! GAGATTTTCAGTGTCCGTTC+CGG + chr1_4:11129708-11129727 None:intergenic 45.0%
GGTGTACTCAAGGAGTAGTT+TGG - chr1_4:11130005-11130024 Msa0150000:intron 45.0%
CCAGAAAGTCCTCCTTTCTT+TGG + chr1_4:11130085-11130104 None:intergenic 45.0%
CCAAAGAAAGGAGGACTTTC+TGG - chr1_4:11130082-11130101 Msa0150000:intron 45.0%
AAAGGAGGACTTTCTGGACT+TGG - chr1_4:11130088-11130107 Msa0150000:intron 45.0%
! TTCTGGACTTGGCCCAATTT+TGG - chr1_4:11130099-11130118 Msa0150000:intron 45.0%
TGTTGTAGGGGCTAACATCT+TGG - chr1_4:11130129-11130148 Msa0150000:intron 45.0%
TTTGGACCTGCTTTGGTTAG+TGG - chr1_4:11130196-11130215 Msa0150000:intron 45.0%
GTGGAAATTGGACTGACCAA+TGG - chr1_4:11130215-11130234 Msa0150000:CDS 45.0%
!!! GGACTGACCAATGGGTTTTT+TGG - chr1_4:11130224-11130243 Msa0150000:CDS 45.0%
!!! GACCAATGGGTTTTTTGGGT+TGG - chr1_4:11130229-11130248 Msa0150000:CDS 45.0%
AACTCATGTTCCTCTCCTTG+TGG - chr1_4:11130309-11130328 Msa0150000:CDS 45.0%
CTTTCTTCATCCACAAGGAG+AGG + chr1_4:11130322-11130341 None:intergenic 45.0%
! CTCTTTAGGAACAACCCAAG+AGG - chr1_4:11126158-11126177 Msa0150000:CDS 45.0%
CTCTTTGTCTTTGCTGGTGT+TGG - chr1_4:11126234-11126253 Msa0150000:CDS 45.0%
! GTTGGTTCAAAAATGGCTGC+TGG - chr1_4:11126252-11126271 Msa0150000:CDS 45.0%
GTACGGATACTTCTCGGATT+AGG - chr1_4:11126436-11126455 Msa0150000:CDS 45.0%
!! TTCTCGGATTAGGAGTGTTC+TGG - chr1_4:11126446-11126465 Msa0150000:CDS 45.0%
TATGGATACTGGACACGACA+CGG + chr1_4:11126553-11126572 None:intergenic 45.0%
! AGGAAGCACGGACACAAATA+TGG + chr1_4:11126571-11126590 None:intergenic 45.0%
TATGGCACAAACTCTTCTGG+TGG - chr1_4:11126750-11126769 Msa0150000:intron 45.0%
CTTCTTCATTACCTCACTGG+TGG - chr1_4:11126919-11126938 Msa0150000:intron 45.0%
CACTTACTAATCCACCAGTG+AGG + chr1_4:11126933-11126952 None:intergenic 45.0%
GGAAGATGAAGCTCATTCTG+AGG - chr1_4:11127460-11127479 Msa0150000:intron 45.0%
ACGTTAGGGGTGAAATTGCT+CGG + chr1_4:11127586-11127605 None:intergenic 45.0%
ATTCATGCTCAATCCTGGCA+CGG - chr1_4:11127696-11127715 Msa0150000:intron 45.0%
GAGTGTAACGCAAGAGCAAA+AGG - chr1_4:11127838-11127857 Msa0150000:intron 45.0%
! GTTGCCTTATTGCACTCCAT+TGG - chr1_4:11127875-11127894 Msa0150000:intron 45.0%
TTGAGCTAGTGACATGGAGA+TGG + chr1_4:11128062-11128081 None:intergenic 45.0%
! ATGGTGTTGAGCTAGTGACA+TGG + chr1_4:11128068-11128087 None:intergenic 45.0%
!! TAGTTTGGTGTTGGGGTTTC+AGG + chr1_4:11128123-11128142 None:intergenic 45.0%
TTGCAGTAGGTACTAGTTGG+AGG + chr1_4:11128212-11128231 None:intergenic 45.0%
! TAGCTTTTGCACCCTTGACA+CGG + chr1_4:11128266-11128285 None:intergenic 45.0%
!! AATTATGGTGGTTGGCTTGG+AGG - chr1_4:11128505-11128524 Msa0150000:intron 45.0%
!! ATTATGGTGGTTGGCTTGGA+GGG - chr1_4:11128506-11128525 Msa0150000:intron 45.0%
!! AGATACGATGGAGGTTTTGG+AGG + chr1_4:11128555-11128574 None:intergenic 45.0%
!! CAATGACTGTGAAGGTGTTG+GGG + chr1_4:11128604-11128623 None:intergenic 45.0%
! CACAATGACTGTGAAGGTGT+TGG + chr1_4:11128606-11128625 None:intergenic 45.0%
AATCTCCTCCATAACTCACC+AGG - chr1_4:11128698-11128717 Msa0150000:intron 45.0%
ATCTCCTCCATAACTCACCA+GGG - chr1_4:11128699-11128718 Msa0150000:intron 45.0%
TGGGCAATATGGTGTGAGTA+GGG + chr1_4:11129011-11129030 None:intergenic 45.0%
ATGGGCAATATGGTGTGAGT+AGG + chr1_4:11129012-11129031 None:intergenic 45.0%
! AATATATGGAGAGTAGCGGG+TGG + chr1_4:11129070-11129089 None:intergenic 45.0%
!!! AGGTTTTAAAGCCTCGGACT+AGG + chr1_4:11129157-11129176 None:intergenic 45.0%
AATGTTCGACGAGGAAGCAA+TGG - chr1_4:11129179-11129198 Msa0150000:intron 45.0%
!! TGAGGCATCTTTTGATGCCT+TGG - chr1_4:11129250-11129269 Msa0150000:intron 45.0%
!! GTTTTGGATGCAAGACCGTT+AGG + chr1_4:11129341-11129360 None:intergenic 45.0%
! TTTTTGTGTGAATGAGGGGC+TGG + chr1_4:11129363-11129382 None:intergenic 45.0%
TACTCCCTTCTATGGCATCT+AGG - chr1_4:11129669-11129688 Msa0150000:CDS 45.0%
GTTGCCTAGATGCCATAGAA+GGG + chr1_4:11129676-11129695 None:intergenic 45.0%
TGTTGCCTAGATGCCATAGA+AGG + chr1_4:11129677-11129696 None:intergenic 45.0%
! AGATTTTCAGTGTCCGTTCC+GGG + chr1_4:11129707-11129726 None:intergenic 45.0%
! GAGATTTTCAGTGTCCGTTC+CGG + chr1_4:11129708-11129727 None:intergenic 45.0%
GGTGTACTCAAGGAGTAGTT+TGG - chr1_4:11130005-11130024 Msa0150000:intron 45.0%
CCAGAAAGTCCTCCTTTCTT+TGG + chr1_4:11130085-11130104 None:intergenic 45.0%
CCAAAGAAAGGAGGACTTTC+TGG - chr1_4:11130082-11130101 Msa0150000:intron 45.0%
AAAGGAGGACTTTCTGGACT+TGG - chr1_4:11130088-11130107 Msa0150000:intron 45.0%
! TTCTGGACTTGGCCCAATTT+TGG - chr1_4:11130099-11130118 Msa0150000:intron 45.0%
TGTTGTAGGGGCTAACATCT+TGG - chr1_4:11130129-11130148 Msa0150000:intron 45.0%
TTTGGACCTGCTTTGGTTAG+TGG - chr1_4:11130196-11130215 Msa0150000:intron 45.0%
GTGGAAATTGGACTGACCAA+TGG - chr1_4:11130215-11130234 Msa0150000:CDS 45.0%
!!! GGACTGACCAATGGGTTTTT+TGG - chr1_4:11130224-11130243 Msa0150000:CDS 45.0%
!!! GACCAATGGGTTTTTTGGGT+TGG - chr1_4:11130229-11130248 Msa0150000:CDS 45.0%
AACTCATGTTCCTCTCCTTG+TGG - chr1_4:11130309-11130328 Msa0150000:CDS 45.0%
CTTTCTTCATCCACAAGGAG+AGG + chr1_4:11130322-11130341 None:intergenic 45.0%
!! AATAAAATTATATTGAAAAT+TGG + chr1_4:11126371-11126390 None:intergenic 5.0%
!!! TTTCAATATAATTTTATTAA+AGG - chr1_4:11126373-11126392 Msa0150000:CDS 5.0%
!!! GTTAATTTTTTTTTTTTTAA+AGG + chr1_4:11128768-11128787 None:intergenic 5.0%
!! AATAAAATTATATTGAAAAT+TGG + chr1_4:11126371-11126390 None:intergenic 5.0%
!!! TTTCAATATAATTTTATTAA+AGG - chr1_4:11126373-11126392 Msa0150000:CDS 5.0%
!!! GTTAATTTTTTTTTTTTTAA+AGG + chr1_4:11128768-11128787 None:intergenic 5.0%
! CATAGATGTCGTGTCGGTGT+TGG + chr1_4:11126480-11126499 None:intergenic 50.0%
GGCTATGGCACAAACTCTTC+TGG - chr1_4:11126747-11126766 Msa0150000:intron 50.0%
GTGACCGGCGGATATCATTA+CGG + chr1_4:11126776-11126795 None:intergenic 50.0%
GGAGGGGTTGTTAGTTGAGA+TGG + chr1_4:11127565-11127584 None:intergenic 50.0%
TAGGGGTGAAATTGCTCGGA+GGG + chr1_4:11127582-11127601 None:intergenic 50.0%
TTAGGGGTGAAATTGCTCGG+AGG + chr1_4:11127583-11127602 None:intergenic 50.0%
!! TTTGGTGTTGGGGTTTCAGG+TGG + chr1_4:11128120-11128139 None:intergenic 50.0%
! GGAATGCGCCTTATTGCAGT+AGG + chr1_4:11128225-11128244 None:intergenic 50.0%
TTGGAGGGAGGTGACATGTA+CGG - chr1_4:11128521-11128540 Msa0150000:intron 50.0%
TTAATCTGTTGGACCGACCC+TGG + chr1_4:11128719-11128738 None:intergenic 50.0%
GGTCGGTCCAACAGATTAAG+AGG - chr1_4:11128720-11128739 Msa0150000:intron 50.0%
TGAGGCCTAAAACCCTTGCT+TGG - chr1_4:11128964-11128983 Msa0150000:intron 50.0%
GAGGCCTAAAACCCTTGCTT+GGG - chr1_4:11128965-11128984 Msa0150000:intron 50.0%
! GCAACCCAAGCAAGGGTTTT+AGG + chr1_4:11128972-11128991 None:intergenic 50.0%
! AAACCCTTGCTTGGGTTGCT+TGG - chr1_4:11128973-11128992 Msa0150000:intron 50.0%
CAATATGGTGTGAGTAGGGC+CGG + chr1_4:11129007-11129026 None:intergenic 50.0%
! CTCGGACTAGGCAGAATTAC+AGG + chr1_4:11129145-11129164 None:intergenic 50.0%
CTGTAATTCTGCCTAGTCCG+AGG - chr1_4:11129143-11129162 Msa0150000:intron 50.0%
GCTTCCTCGTCGAACATTAC+AGG + chr1_4:11129177-11129196 None:intergenic 50.0%
!!! TGTGAATGAGGGGCTGGTTT+TGG + chr1_4:11129357-11129376 None:intergenic 50.0%
CACAAACCAGGTCATCAAGG+TGG - chr1_4:11129456-11129475 Msa0150000:intron 50.0%
! ATGTCACCACCTTGATGACC+TGG + chr1_4:11129465-11129484 None:intergenic 50.0%
GTGGTGACATGCACAACTCA+TGG - chr1_4:11129475-11129494 Msa0150000:intron 50.0%
! ATTTTCAGTGTCCGTTCCGG+GGG + chr1_4:11129705-11129724 None:intergenic 50.0%
! GATTTTCAGTGTCCGTTCCG+GGG + chr1_4:11129706-11129725 None:intergenic 50.0%
AGTGGAGTAGGGTGTACTCA+AGG - chr1_4:11129995-11130014 Msa0150000:intron 50.0%
!! GGACTTGGCCCAATTTTGGT+TGG - chr1_4:11130103-11130122 Msa0150000:intron 50.0%
GCAGGTCCAAAAGATCTTGC+TGG + chr1_4:11130187-11130206 None:intergenic 50.0%
GCCCAACCCAAAAAACCCAT+TGG + chr1_4:11130234-11130253 None:intergenic 50.0%
!!! TTTTGGGTTGGGCCTCTCAT+TGG - chr1_4:11130241-11130260 Msa0150000:CDS 50.0%
! CATAGATGTCGTGTCGGTGT+TGG + chr1_4:11126480-11126499 None:intergenic 50.0%
GGCTATGGCACAAACTCTTC+TGG - chr1_4:11126747-11126766 Msa0150000:intron 50.0%
GTGACCGGCGGATATCATTA+CGG + chr1_4:11126776-11126795 None:intergenic 50.0%
GGAGGGGTTGTTAGTTGAGA+TGG + chr1_4:11127565-11127584 None:intergenic 50.0%
TAGGGGTGAAATTGCTCGGA+GGG + chr1_4:11127582-11127601 None:intergenic 50.0%
TTAGGGGTGAAATTGCTCGG+AGG + chr1_4:11127583-11127602 None:intergenic 50.0%
!! TTTGGTGTTGGGGTTTCAGG+TGG + chr1_4:11128120-11128139 None:intergenic 50.0%
! GGAATGCGCCTTATTGCAGT+AGG + chr1_4:11128225-11128244 None:intergenic 50.0%
TTGGAGGGAGGTGACATGTA+CGG - chr1_4:11128521-11128540 Msa0150000:intron 50.0%
TTAATCTGTTGGACCGACCC+TGG + chr1_4:11128719-11128738 None:intergenic 50.0%
GGTCGGTCCAACAGATTAAG+AGG - chr1_4:11128720-11128739 Msa0150000:intron 50.0%
TGAGGCCTAAAACCCTTGCT+TGG - chr1_4:11128964-11128983 Msa0150000:intron 50.0%
GAGGCCTAAAACCCTTGCTT+GGG - chr1_4:11128965-11128984 Msa0150000:intron 50.0%
! GCAACCCAAGCAAGGGTTTT+AGG + chr1_4:11128972-11128991 None:intergenic 50.0%
! AAACCCTTGCTTGGGTTGCT+TGG - chr1_4:11128973-11128992 Msa0150000:intron 50.0%
CAATATGGTGTGAGTAGGGC+CGG + chr1_4:11129007-11129026 None:intergenic 50.0%
! CTCGGACTAGGCAGAATTAC+AGG + chr1_4:11129145-11129164 None:intergenic 50.0%
CTGTAATTCTGCCTAGTCCG+AGG - chr1_4:11129143-11129162 Msa0150000:intron 50.0%
GCTTCCTCGTCGAACATTAC+AGG + chr1_4:11129177-11129196 None:intergenic 50.0%
!!! TGTGAATGAGGGGCTGGTTT+TGG + chr1_4:11129357-11129376 None:intergenic 50.0%
CACAAACCAGGTCATCAAGG+TGG - chr1_4:11129456-11129475 Msa0150000:intron 50.0%
! ATGTCACCACCTTGATGACC+TGG + chr1_4:11129465-11129484 None:intergenic 50.0%
GTGGTGACATGCACAACTCA+TGG - chr1_4:11129475-11129494 Msa0150000:intron 50.0%
! ATTTTCAGTGTCCGTTCCGG+GGG + chr1_4:11129705-11129724 None:intergenic 50.0%
! GATTTTCAGTGTCCGTTCCG+GGG + chr1_4:11129706-11129725 None:intergenic 50.0%
AGTGGAGTAGGGTGTACTCA+AGG - chr1_4:11129995-11130014 Msa0150000:intron 50.0%
!! GGACTTGGCCCAATTTTGGT+TGG - chr1_4:11130103-11130122 Msa0150000:intron 50.0%
GCAGGTCCAAAAGATCTTGC+TGG + chr1_4:11130187-11130206 None:intergenic 50.0%
GCCCAACCCAAAAAACCCAT+TGG + chr1_4:11130234-11130253 None:intergenic 50.0%
!!! TTTTGGGTTGGGCCTCTCAT+TGG - chr1_4:11130241-11130260 Msa0150000:CDS 50.0%
!! TGTCGTGTCGGTGTTGGTGT+CGG + chr1_4:11126474-11126493 None:intergenic 55.0%
GTGGCCGTAATGATATCCGC+CGG - chr1_4:11126769-11126788 Msa0150000:intron 55.0%
ATATCCGCCGGTCACGTTTC+CGG - chr1_4:11126781-11126800 Msa0150000:intron 55.0%
AGGTCACGGCGGGATTCAAA+TGG + chr1_4:11126810-11126829 None:intergenic 55.0%
TTTGAATCCCGCCGTGACCT+TGG - chr1_4:11126810-11126829 Msa0150000:intron 55.0%
TTGAATCCCGCCGTGACCTT+GGG - chr1_4:11126811-11126830 Msa0150000:intron 55.0%
AACAAGGAGGCCCAAGGTCA+CGG + chr1_4:11126824-11126843 None:intergenic 55.0%
TAGAACGGACGACGGTGATG+TGG + chr1_4:11126852-11126871 None:intergenic 55.0%
AGGGGTGAAATTGCTCGGAG+GGG + chr1_4:11127581-11127600 None:intergenic 55.0%
TACATCGGCACTAGTGTGCG+AGG + chr1_4:11127988-11128007 None:intergenic 55.0%
!! TTGGAGGCGTCTGGTATCCA+AGG + chr1_4:11128196-11128215 None:intergenic 55.0%
!! AGGTACTAGTTGGAGGCGTC+TGG + chr1_4:11128205-11128224 None:intergenic 55.0%
TGGAGGGAGGTGACATGTAC+GGG - chr1_4:11128522-11128541 Msa0150000:intron 55.0%
! GGTGTTGGGGTCATCTAGAG+TGG + chr1_4:11128591-11128610 None:intergenic 55.0%
CCTCCATAACTCACCAGGGT+CGG - chr1_4:11128703-11128722 Msa0150000:intron 55.0%
TCTAGGCAACAGTGAACCCC+CGG - chr1_4:11129686-11129705 Msa0150000:CDS 55.0%
GTAGGGGCTAACATCTTGGC+TGG - chr1_4:11130133-11130152 Msa0150000:intron 55.0%
! TTGGGCCTCTCATTGGTGGT+GGG - chr1_4:11130248-11130267 Msa0150000:CDS 55.0%
!! TGTCGTGTCGGTGTTGGTGT+CGG + chr1_4:11126474-11126493 None:intergenic 55.0%
GTGGCCGTAATGATATCCGC+CGG - chr1_4:11126769-11126788 Msa0150000:intron 55.0%
ATATCCGCCGGTCACGTTTC+CGG - chr1_4:11126781-11126800 Msa0150000:intron 55.0%
AGGTCACGGCGGGATTCAAA+TGG + chr1_4:11126810-11126829 None:intergenic 55.0%
TTTGAATCCCGCCGTGACCT+TGG - chr1_4:11126810-11126829 Msa0150000:intron 55.0%
TTGAATCCCGCCGTGACCTT+GGG - chr1_4:11126811-11126830 Msa0150000:intron 55.0%
AACAAGGAGGCCCAAGGTCA+CGG + chr1_4:11126824-11126843 None:intergenic 55.0%
TAGAACGGACGACGGTGATG+TGG + chr1_4:11126852-11126871 None:intergenic 55.0%
AGGGGTGAAATTGCTCGGAG+GGG + chr1_4:11127581-11127600 None:intergenic 55.0%
TACATCGGCACTAGTGTGCG+AGG + chr1_4:11127988-11128007 None:intergenic 55.0%
!! TTGGAGGCGTCTGGTATCCA+AGG + chr1_4:11128196-11128215 None:intergenic 55.0%
!! AGGTACTAGTTGGAGGCGTC+TGG + chr1_4:11128205-11128224 None:intergenic 55.0%
TGGAGGGAGGTGACATGTAC+GGG - chr1_4:11128522-11128541 Msa0150000:intron 55.0%
! GGTGTTGGGGTCATCTAGAG+TGG + chr1_4:11128591-11128610 None:intergenic 55.0%
CCTCCATAACTCACCAGGGT+CGG - chr1_4:11128703-11128722 Msa0150000:intron 55.0%
TCTAGGCAACAGTGAACCCC+CGG - chr1_4:11129686-11129705 Msa0150000:CDS 55.0%
GTAGGGGCTAACATCTTGGC+TGG - chr1_4:11130133-11130152 Msa0150000:intron 55.0%
! TTGGGCCTCTCATTGGTGGT+GGG - chr1_4:11130248-11130267 Msa0150000:CDS 55.0%
ATGGCCACCGGAAACGTGAC+CGG + chr1_4:11126791-11126810 None:intergenic 60.0%
GGCGGGATTCAAATGGCCAC+CGG + chr1_4:11126803-11126822 None:intergenic 60.0%
GTGACCTTGGGCCTCCTTGT+TGG - chr1_4:11126823-11126842 Msa0150000:intron 60.0%
ACCTTGGGCCTCCTTGTTGG+CGG - chr1_4:11126826-11126845 Msa0150000:intron 60.0%
TGATGTGGCCGCCAACAAGG+AGG + chr1_4:11126837-11126856 None:intergenic 60.0%
ATCGTTCGGATGTCCGTGCC+AGG + chr1_4:11127712-11127731 None:intergenic 60.0%
!! ATGGTGGTTGGCTTGGAGGG+AGG - chr1_4:11128509-11128528 Msa0150000:intron 60.0%
CCGACCCTGGTGAGTTATGG+AGG + chr1_4:11128706-11128725 None:intergenic 60.0%
GGACCGACCCTGGTGAGTTA+TGG + chr1_4:11128709-11128728 None:intergenic 60.0%
GGGCCAAGCAACCCAAGCAA+GGG + chr1_4:11128979-11128998 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG + chr1_4:11128980-11128999 None:intergenic 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG - chr1_4:11128981-11129000 Msa0150000:intron 60.0%
TGTGAGTAGGGCCGGCCTAA+GGG + chr1_4:11128999-11129018 None:intergenic 60.0%
! AGCGGGTGGTCTTGCCAAGT+TGG + chr1_4:11129056-11129075 None:intergenic 60.0%
GCAACAGTGAACCCCCGGAA+CGG - chr1_4:11129691-11129710 Msa0150000:CDS 60.0%
GGGGCTAACATCTTGGCTGG+CGG - chr1_4:11130136-11130155 Msa0150000:intron 60.0%
GGGCTAACATCTTGGCTGGC+GGG - chr1_4:11130137-11130156 Msa0150000:intron 60.0%
GGCTAACATCTTGGCTGGCG+GGG - chr1_4:11130138-11130157 Msa0150000:intron 60.0%
! TGGGTTGGGCCTCTCATTGG+TGG - chr1_4:11130244-11130263 Msa0150000:CDS 60.0%
GTTGGGCCTCTCATTGGTGG+TGG - chr1_4:11130247-11130266 Msa0150000:CDS 60.0%
GCAAGCCCACCACCAATGAG+AGG + chr1_4:11130256-11130275 None:intergenic 60.0%
!! CTCATTGGTGGTGGGCTTGC+TGG - chr1_4:11130256-11130275 Msa0150000:CDS 60.0%
ATGGCCACCGGAAACGTGAC+CGG + chr1_4:11126791-11126810 None:intergenic 60.0%
GGCGGGATTCAAATGGCCAC+CGG + chr1_4:11126803-11126822 None:intergenic 60.0%
GTGACCTTGGGCCTCCTTGT+TGG - chr1_4:11126823-11126842 Msa0150000:intron 60.0%
ACCTTGGGCCTCCTTGTTGG+CGG - chr1_4:11126826-11126845 Msa0150000:intron 60.0%
TGATGTGGCCGCCAACAAGG+AGG + chr1_4:11126837-11126856 None:intergenic 60.0%
ATCGTTCGGATGTCCGTGCC+AGG + chr1_4:11127712-11127731 None:intergenic 60.0%
!! ATGGTGGTTGGCTTGGAGGG+AGG - chr1_4:11128509-11128528 Msa0150000:intron 60.0%
CCGACCCTGGTGAGTTATGG+AGG + chr1_4:11128706-11128725 None:intergenic 60.0%
GGACCGACCCTGGTGAGTTA+TGG + chr1_4:11128709-11128728 None:intergenic 60.0%
GGGCCAAGCAACCCAAGCAA+GGG + chr1_4:11128979-11128998 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG + chr1_4:11128980-11128999 None:intergenic 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG - chr1_4:11128981-11129000 Msa0150000:intron 60.0%
TGTGAGTAGGGCCGGCCTAA+GGG + chr1_4:11128999-11129018 None:intergenic 60.0%
! AGCGGGTGGTCTTGCCAAGT+TGG + chr1_4:11129056-11129075 None:intergenic 60.0%
GCAACAGTGAACCCCCGGAA+CGG - chr1_4:11129691-11129710 Msa0150000:CDS 60.0%
GGGGCTAACATCTTGGCTGG+CGG - chr1_4:11130136-11130155 Msa0150000:intron 60.0%
GGGCTAACATCTTGGCTGGC+GGG - chr1_4:11130137-11130156 Msa0150000:intron 60.0%
GGCTAACATCTTGGCTGGCG+GGG - chr1_4:11130138-11130157 Msa0150000:intron 60.0%
! TGGGTTGGGCCTCTCATTGG+TGG - chr1_4:11130244-11130263 Msa0150000:CDS 60.0%
GTTGGGCCTCTCATTGGTGG+TGG - chr1_4:11130247-11130266 Msa0150000:CDS 60.0%
GCAAGCCCACCACCAATGAG+AGG + chr1_4:11130256-11130275 None:intergenic 60.0%
!! CTCATTGGTGGTGGGCTTGC+TGG - chr1_4:11130256-11130275 Msa0150000:CDS 60.0%
AAGGAGGCCCAAGGTCACGG+CGG + chr1_4:11126821-11126840 None:intergenic 65.0%
CGGTGATGTGGCCGCCAACA+AGG + chr1_4:11126840-11126859 None:intergenic 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG - chr1_4:11128985-11129004 Msa0150000:intron 65.0%
GTGTGAGTAGGGCCGGCCTA+AGG + chr1_4:11129000-11129019 None:intergenic 65.0%
AAGGAGGCCCAAGGTCACGG+CGG + chr1_4:11126821-11126840 None:intergenic 65.0%
CGGTGATGTGGCCGCCAACA+AGG + chr1_4:11126840-11126859 None:intergenic 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG - chr1_4:11128985-11129004 Msa0150000:intron 65.0%
GTGTGAGTAGGGCCGGCCTA+AGG + chr1_4:11129000-11129019 None:intergenic 65.0%
TCCGCCGGTCACGTTTCCGG+TGG - chr1_4:11126784-11126803 Msa0150000:intron 70.0%
GCCACCGGAAACGTGACCGG+CGG + chr1_4:11126788-11126807 None:intergenic 70.0%
AGGAGGCCCAAGGTCACGGC+GGG + chr1_4:11126820-11126839 None:intergenic 70.0%
GCCGCCAACAAGGAGGCCCA+AGG + chr1_4:11126830-11126849 None:intergenic 70.0%
TTGGCTGGCGGGGCTTTCGC+AGG - chr1_4:11130148-11130167 Msa0150000:intron 70.0%
TCCGCCGGTCACGTTTCCGG+TGG - chr1_4:11126784-11126803 Msa0150000:intron 70.0%
GCCACCGGAAACGTGACCGG+CGG + chr1_4:11126788-11126807 None:intergenic 70.0%
AGGAGGCCCAAGGTCACGGC+GGG + chr1_4:11126820-11126839 None:intergenic 70.0%
GCCGCCAACAAGGAGGCCCA+AGG + chr1_4:11126830-11126849 None:intergenic 70.0%
TTGGCTGGCGGGGCTTTCGC+AGG - chr1_4:11130148-11130167 Msa0150000:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 11126040 11130436 11126040 ID=Msa0150000;Name=Msa0150000
chr1_4 mRNA 11126040 11130436 11126040 ID=Msa0150000-mRNA-1;Parent=Msa0150000;Name=Msa0150000-mRNA-1;_AED=0.08;_eAED=0.08;_QI=107|1|1|1|1|1|3|88|247
chr1_4 exon 11126040 11126505 11126040 ID=Msa0150000-mRNA-1:exon:4662;Parent=Msa0150000-mRNA-1
chr1_4 exon 11129531 11129769 11129531 ID=Msa0150000-mRNA-1:exon:4661;Parent=Msa0150000-mRNA-1
chr1_4 exon 11130203 11130436 11130203 ID=Msa0150000-mRNA-1:exon:4660;Parent=Msa0150000-mRNA-1
chr1_4 five_prime_UTR 11130330 11130436 11130330 ID=Msa0150000-mRNA-1:five_prime_utr;Parent=Msa0150000-mRNA-1
chr1_4 CDS 11130203 11130329 11130203 ID=Msa0150000-mRNA-1:cds;Parent=Msa0150000-mRNA-1
chr1_4 CDS 11129531 11129769 11129531 ID=Msa0150000-mRNA-1:cds;Parent=Msa0150000-mRNA-1
chr1_4 CDS 11126128 11126505 11126128 ID=Msa0150000-mRNA-1:cds;Parent=Msa0150000-mRNA-1
chr1_4 three_prime_UTR 11126040 11126127 11126040 ID=Msa0150000-mRNA-1:three_prime_utr;Parent=Msa0150000-mRNA-1
Gene Sequence

>Msa0150000

ATGACCAAAATCTCTTTAGGAACAACCCAAGAGGCTACTCAACCTAATTGCATCCGAGCTCTAATTGTTGAATTCATTGTCACCTTTCTCTTTGTCTTTGCTGGTGTTGGTTCAAAAATGGCTGCTGATAAGCTAAGTGAAGATGGTTTAGTGGGATTATTTTTTGTGGCTATGGCACAAACTCTTCTGGTGGCCGTAATGATATCCGCCGGTCACGTTTCCGGTGGCCATTTGAATCCCGCCGTGACCTTGGGCCTCCTTGTTGGCGGCCACATCACCGTCGTCCGTTCTATCTTTTATTGGATTGATCAACATATAGCATCTGCAGGAGCTTGCTATCTTCTTCATTACCTCACTGGTGGATTAACAACTCCAGTTCATACACTTAAAAGTGGAGTAGGGTGTACTCAAGGAGTAGTTTGGGAAATTGTGTTGACATTCTCTTTGTTGTTCACTGTGTATGCAACTATGGTTGATCCAAAGAAAGGAGGACTTTCTGGACTTGGCCCAATTTTGGTTGGATTTGTTGTAGGGGCTAACATCTTGGCTGGCGGGGCTTTCGCAGGTGCTTCCATGAATCCAGCAAGATCTTTTGGACCTGCTTTGGTTAGTGGAAATTGGACTGACCAATGGGTTTTTTGGGTTGGGCCTCTCATTGGTGGTGGGCTTGCTGGTTTCATTTATGAGAATTTTCTTATCAATAGAACTCATGTTCCTCTCCTTGTGGATGAAGAAAGCTACTAA

Protein sequence

>Msa0150000

MTKISLGTTQEATQPNCIRALIVEFIVTFLFVFAGVGSKMAADKLSEDGLVGLFFVAMAQTLLVAVMISAGHVSGGHLNPAVTLGLLVGGHITVVRSIFYWIDQHIASAGACYLLHYLTGGLTTPVHTLKSGVGCTQGVVWEIVLTFSLLFTVYATMVDPKKGGLSGLGPILVGFVVGANILAGGAFAGASMNPARSFGPALVSGNWTDQWVFWVGPLIGGGLAGFIYENFLINRTHVPLLVDEESY*