AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0991010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0991010 MtrunA17_Chr6g0470971 91.519 283 24 0 1 283 1 283 0.0 534
Msa0991010 MtrunA17_Chr1g0203441 57.770 296 88 6 1 283 1 272 7.64e-103 301
Msa0991010 MtrunA17_Chr1g0211161 73.636 110 29 0 11 120 10 119 9.20e-54 174
Msa0991010 MtrunA17_Chr4g0058631 71.818 110 31 0 11 120 9 118 7.79e-53 176
Msa0991010 MtrunA17_Chr3g0117091 70.000 120 34 1 1 120 1 118 8.41e-53 175
Msa0991010 MtrunA17_Chr1g0193371 70.940 117 32 1 1 117 1 115 1.17e-52 176
Msa0991010 MtrunA17_Chr7g0270891 70.085 117 33 1 1 117 1 115 1.40e-51 173
Msa0991010 MtrunA17_Chr1g0193801 66.400 125 39 2 1 125 1 122 6.10e-51 172
Msa0991010 MtrunA17_Chr7g0271241 71.171 111 30 1 1 111 1 109 5.99e-50 169
Msa0991010 MtrunA17_Chr2g0309911 59.690 129 48 2 1 128 1 126 4.16e-49 165
Msa0991010 MtrunA17_Chr2g0330041 64.103 117 40 1 1 117 1 115 4.57e-48 164
Msa0991010 MtrunA17_Chr8g0342541 64.103 117 40 1 1 117 1 115 7.92e-48 162
Msa0991010 MtrunA17_Chr1g0203411 42.060 233 107 7 6 226 4 220 9.50e-48 160
Msa0991010 MtrunA17_Chr4g0032401 65.741 108 37 0 10 117 13 120 1.29e-47 161
Msa0991010 MtrunA17_Chr8g0342521 58.696 138 49 2 1 138 1 130 1.39e-47 162
Msa0991010 MtrunA17_Chr8g0387421 61.538 117 43 1 1 117 1 115 1.45e-47 161
Msa0991010 MtrunA17_Chr3g0088461 66.055 109 37 0 9 117 17 125 2.34e-47 161
Msa0991010 MtrunA17_Chr2g0328771 66.019 103 35 0 15 117 21 123 1.63e-46 158
Msa0991010 MtrunA17_Chr5g0397231 61.062 113 42 1 1 113 1 111 9.19e-46 157
Msa0991010 MtrunA17_Chr4g0022891 39.167 240 118 6 11 228 9 242 1.12e-45 154
Msa0991010 MtrunA17_Chr7g0274581 52.555 137 65 0 15 151 13 149 3.84e-45 151
Msa0991010 MtrunA17_Chr5g0435101 58.036 112 47 0 9 120 6 117 4.71e-45 151
Msa0991010 MtrunA17_Chr8g0342481 59.055 127 49 2 1 126 1 125 5.22e-45 156
Msa0991010 MtrunA17_Chr1g0187761 54.610 141 57 2 6 140 4 143 1.41e-44 151
Msa0991010 MtrunA17_Chr4g0044421 60.177 113 44 1 16 128 14 125 3.09e-44 149
Msa0991010 MtrunA17_Chr8g0385321 64.706 102 36 0 16 117 14 115 6.33e-44 151
Msa0991010 MtrunA17_Chr4g0037141 51.471 136 62 2 9 140 7 142 9.49e-44 150
Msa0991010 MtrunA17_Chr3g0115821 60.000 110 44 0 11 120 9 118 1.06e-43 152
Msa0991010 MtrunA17_Chr3g0131121 53.968 126 57 1 16 140 14 139 1.47e-43 150
Msa0991010 MtrunA17_Chr1g0167661 45.763 177 79 3 6 181 4 164 1.55e-43 149
Msa0991010 MtrunA17_Chr2g0281071 61.321 106 41 0 15 120 14 119 2.34e-43 150
Msa0991010 MtrunA17_Chr5g0434571 53.030 132 61 1 11 141 45 176 5.29e-43 150
Msa0991010 MtrunA17_Chr5g0395281 61.682 107 41 0 11 117 9 115 6.53e-43 149
Msa0991010 MtrunA17_Chr4g0022931 55.556 126 46 1 11 126 10 135 7.11e-43 147
Msa0991010 MtrunA17_Chr1g0167691 37.247 247 122 7 6 240 4 229 1.22e-42 146
Msa0991010 MtrunA17_Chr4g0039971 58.929 112 46 0 6 117 5 116 1.58e-42 149
Msa0991010 MtrunA17_Chr7g0217741 60.909 110 43 0 11 120 9 118 1.85e-42 147
Msa0991010 MtrunA17_Chr4g0057031 57.143 112 48 0 9 120 7 118 2.27e-42 146
Msa0991010 MtrunA17_Chr6g0453471 60.909 110 43 0 11 120 9 118 2.78e-42 148
Msa0991010 MtrunA17_Chr4g0048511 58.261 115 47 1 15 128 14 128 3.43e-42 148
Msa0991010 MtrunA17_Chr3g0110351 59.813 107 43 0 11 117 9 115 4.30e-42 146
Msa0991010 MtrunA17_Chr2g0323351 58.036 112 47 0 11 122 9 120 5.58e-42 144
Msa0991010 MtrunA17_Chr4g0042671 55.385 130 57 1 11 139 9 138 8.71e-42 148
Msa0991010 MtrunA17_Chr5g0410961 59.649 114 45 1 15 127 13 126 2.72e-41 145
Msa0991010 MtrunA17_Chr3g0103281 59.633 109 44 0 9 117 7 115 4.47e-41 144
Msa0991010 MtrunA17_Chr2g0323411 58.559 111 46 0 11 121 9 119 6.55e-41 144
Msa0991010 MtrunA17_Chr7g0261281 57.143 112 48 0 6 117 4 115 8.28e-41 142
Msa0991010 MtrunA17_Chr2g0311221 57.522 113 48 0 1 113 1 113 8.94e-41 144
Msa0991010 MtrunA17_Chr4g0070611 55.833 120 50 1 9 128 7 123 9.74e-41 143
Msa0991010 MtrunA17_Chr1g0186061 51.613 124 60 0 9 132 15 138 1.00e-40 141
Msa0991010 MtrunA17_Chr4g0070641 55.833 120 50 1 9 128 7 123 1.19e-40 139
Msa0991010 MtrunA17_Chr3g0121241 56.757 111 48 0 9 119 37 147 1.32e-40 142
Msa0991010 MtrunA17_Chr1g0168661 60.577 104 41 0 14 117 21 124 2.16e-40 140
Msa0991010 MtrunA17_Chr4g0022901 55.963 109 48 0 11 119 10 118 2.75e-40 140
Msa0991010 MtrunA17_Chr4g0022881 51.852 135 64 1 6 140 4 137 3.54e-40 139
Msa0991010 MtrunA17_Chr4g0022911 51.538 130 51 1 12 129 11 140 3.83e-40 141
Msa0991010 MtrunA17_Chr7g0228891 58.879 107 44 0 11 117 9 115 4.84e-40 140
Msa0991010 MtrunA17_Chr4g0068061 58.036 112 47 0 6 117 4 115 9.11e-40 141
Msa0991010 MtrunA17_Chr8g0343831 59.259 108 44 0 10 117 4 111 1.58e-39 138
Msa0991010 MtrunA17_Chr6g0452271 48.175 137 70 1 11 146 9 145 1.69e-39 140
Msa0991010 MtrunA17_Chr8g0346561 56.250 112 49 0 6 117 4 115 1.69e-39 139
Msa0991010 MtrunA17_Chr4g0055981 58.333 108 45 0 10 117 51 158 3.98e-39 137
Msa0991010 MtrunA17_Chr7g0275911 52.991 117 55 0 9 125 7 123 6.70e-39 137
Msa0991010 MtrunA17_Chr7g0217221 56.250 112 49 0 11 122 9 120 1.30e-38 136
Msa0991010 MtrunA17_Chr3g0092401 52.066 121 58 0 11 131 10 130 1.79e-38 137
Msa0991010 MtrunA17_Chr4g0028311 54.400 125 56 1 6 129 4 128 2.96e-38 137
Msa0991010 MtrunA17_Chr7g0254411 57.944 107 45 0 11 117 9 115 7.12e-38 136
Msa0991010 MtrunA17_Chr2g0327351 55.224 134 57 3 6 137 4 136 7.37e-38 135
Msa0991010 MtrunA17_Chr3g0135311 42.308 182 90 4 6 175 4 182 8.94e-38 136
Msa0991010 MtrunA17_Chr4g0060721 58.252 103 43 0 15 117 14 116 1.37e-37 135
Msa0991010 MtrunA17_Chr1g0194951 57.798 109 46 0 9 117 7 115 1.90e-37 136
Msa0991010 MtrunA17_Chr1g0152011 56.637 113 48 1 6 117 4 116 2.17e-37 135
Msa0991010 MtrunA17_Chr1g0151941 52.212 113 53 1 6 117 4 116 2.50e-37 132
Msa0991010 MtrunA17_Chr8g0349261 52.459 122 56 2 11 130 10 131 2.97e-37 134
Msa0991010 MtrunA17_Chr5g0400821 55.752 113 49 1 6 117 4 116 3.94e-37 134
Msa0991010 MtrunA17_Chr5g0417821 55.660 106 47 0 15 120 8 113 5.02e-37 133
Msa0991010 MtrunA17_Chr1g0194291 47.333 150 63 3 6 139 13 162 8.26e-37 131
Msa0991010 MtrunA17_Chr1g0194301 39.474 190 92 6 15 197 34 207 1.50e-36 131
Msa0991010 MtrunA17_Chr1g0209661 51.724 116 55 1 11 126 24 138 2.89e-36 131
Msa0991010 MtrunA17_Chr7g0228231 51.304 115 56 0 15 129 15 129 3.36e-36 128
Msa0991010 MtrunA17_Chr6g0450101 50.407 123 60 1 12 134 12 133 3.64e-36 128
Msa0991010 MtrunA17_Chr7g0264641 56.481 108 46 1 11 117 9 116 3.64e-36 130
Msa0991010 MtrunA17_Chr6g0487491 46.053 152 72 3 6 147 4 155 3.74e-36 130
Msa0991010 MtrunA17_Chr5g0434831 56.190 105 46 0 15 119 8 112 1.29e-35 126
Msa0991010 MtrunA17_Chr2g0327821 53.398 103 48 0 15 117 7 109 1.61e-35 127
Msa0991010 MtrunA17_Chr6g0453211 55.340 103 46 0 11 113 9 111 1.88e-35 129
Msa0991010 MtrunA17_Chr4g0054391 36.017 236 119 8 6 218 4 230 4.63e-35 127
Msa0991010 MtrunA17_Chr1g0180391 55.340 103 46 0 15 117 20 122 7.42e-35 125
Msa0991010 MtrunA17_Chr5g0434911 52.212 113 54 0 7 119 14 126 1.48e-34 126
Msa0991010 MtrunA17_Chr5g0434931 54.286 105 48 0 15 119 36 140 4.43e-34 125
Msa0991010 MtrunA17_Chr3g0099131 53.846 104 48 0 15 118 42 145 5.91e-34 129
Msa0991010 MtrunA17_Chr4g0030881 47.934 121 56 1 9 122 2 122 1.08e-33 123
Msa0991010 MtrunA17_Chr2g0322521 52.294 109 52 0 10 118 25 133 1.72e-33 126
Msa0991010 MtrunA17_Chr5g0434841 54.286 105 48 0 15 119 21 125 3.00e-33 124
Msa0991010 MtrunA17_Chr1g0154031 52.427 103 49 0 15 117 77 179 5.81e-33 125
Msa0991010 MtrunA17_Chr4g0072751 51.852 108 51 1 6 112 4 111 1.47e-32 122
Msa0991010 MtrunA17_Chr7g0240821 53.535 99 46 0 19 117 6 104 1.59e-32 119
Msa0991010 MtrunA17_Chr7g0220341 49.580 119 58 1 15 131 26 144 1.62e-32 120
Msa0991010 MtrunA17_Chr4g0068921 53.922 102 47 0 15 116 25 126 1.63e-32 118
Msa0991010 MtrunA17_Chr7g0269831 55.357 112 50 0 6 117 4 115 1.95e-32 122
Msa0991010 MtrunA17_Chr8g0342511 62.921 89 31 1 1 89 1 87 2.95e-32 114
Msa0991010 MtrunA17_Chr8g0354661 52.427 103 49 0 15 117 38 140 3.40e-32 124
Msa0991010 MtrunA17_Chr7g0228991 33.613 238 130 4 15 236 30 255 3.53e-32 119
Msa0991010 MtrunA17_Chr3g0080861 52.427 103 49 0 15 117 38 140 3.94e-32 124
Msa0991010 MtrunA17_Chr2g0293911 53.922 102 47 0 15 116 25 126 9.59e-32 120
Msa0991010 MtrunA17_Chr5g0441131 51.456 103 49 1 15 116 10 112 1.03e-31 116
Msa0991010 MtrunA17_Chr8g0342531 64.198 81 29 0 11 91 9 89 1.26e-31 115
Msa0991010 MtrunA17_Chr8g0360111 54.000 100 46 0 15 114 26 125 2.15e-31 117
Msa0991010 MtrunA17_Chr1g0192411 51.429 105 51 0 13 117 11 115 8.28e-31 119
Msa0991010 MtrunA17_Chr8g0342461 63.095 84 30 1 9 91 7 90 8.68e-30 109
Msa0991010 MtrunA17_Chr8g0342471 63.095 84 30 1 9 91 7 90 1.68e-29 108
Msa0991010 MtrunA17_Chr7g0247131 55.435 92 40 1 46 137 10 100 5.03e-29 111
Msa0991010 MtrunA17_Chr8g0334881 52.427 103 48 1 15 116 11 113 5.77e-29 112
Msa0991010 MtrunA17_Chr5g0440781 48.571 105 53 1 15 118 13 117 6.44e-29 108
Msa0991010 MtrunA17_Chr5g0440761 48.571 105 53 1 15 118 13 117 2.36e-28 109
Msa0991010 MtrunA17_Chr5g0441141 48.571 105 53 1 15 118 13 117 2.93e-28 109
Msa0991010 MtrunA17_Chr4g0042611 56.250 80 35 0 11 90 9 88 3.52e-28 103
Msa0991010 MtrunA17_Chr4g0013361 50.476 105 51 1 15 118 11 115 1.35e-27 108
Msa0991010 MtrunA17_Chr5g0401731 50.000 102 50 1 16 117 15 115 5.07e-27 107
Msa0991010 MtrunA17_Chr4g0008551 35.503 169 102 3 16 184 38 199 2.97e-26 105
Msa0991010 MtrunA17_Chr6g0454921 48.039 102 52 1 16 117 15 115 4.40e-26 102
Msa0991010 MtrunA17_Chr4g0053431 48.039 102 52 1 16 117 5 105 1.26e-25 102
Msa0991010 MtrunA17_Chr5g0395221 58.025 81 34 0 10 90 8 88 1.26e-25 97.1
Msa0991010 MtrunA17_Chr5g0417621 43.396 106 59 1 12 117 130 234 4.77e-25 103
Msa0991010 MtrunA17_Chr2g0294811 54.118 85 39 0 6 90 4 88 5.90e-25 96.7
Msa0991010 MtrunA17_Chr4g0042501 44.118 102 56 1 16 117 105 205 9.69e-25 102
Msa0991010 MtrunA17_Chr7g0238631 45.217 115 62 1 3 117 100 213 9.71e-25 103
Msa0991010 MtrunA17_Chr6g0460661 47.525 101 50 2 12 111 12 110 1.57e-24 96.7
Msa0991010 MtrunA17_Chr6g0480581 42.157 102 56 2 16 116 4 103 2.32e-24 98.2
Msa0991010 MtrunA17_Chr3g0133601 46.154 104 51 2 16 117 37 137 2.38e-24 97.8
Msa0991010 MtrunA17_Chr3g0125801 37.594 133 80 2 16 147 16 146 8.48e-24 97.8
Msa0991010 MtrunA17_Chr3g0099141 49.412 85 43 0 11 95 37 121 1.82e-23 93.2
Msa0991010 MtrunA17_Chr2g0323321 52.500 80 38 0 15 94 12 91 5.55e-23 91.3
Msa0991010 MtrunA17_Chr5g0429661 29.255 188 123 3 16 203 122 299 8.65e-23 96.3
Msa0991010 MtrunA17_Chr7g0229101 57.143 70 30 0 46 115 4 73 1.43e-22 92.8
Msa0991010 MtrunA17_Chr5g0434901 57.353 68 29 0 48 115 7 74 6.39e-22 88.6
Msa0991010 MtrunA17_Chr6g0460671 40.708 113 65 2 7 118 89 200 7.15e-22 93.6
Msa0991010 MtrunA17_Chr7g0229131 44.330 97 43 1 46 131 4 100 1.48e-21 89.0
Msa0991010 MtrunA17_Chr7g0254261 41.739 115 63 3 5 117 77 189 1.67e-21 92.8
Msa0991010 MtrunA17_Chr3g0117511 39.831 118 69 2 6 122 172 288 1.80e-21 93.6
Msa0991010 MtrunA17_Chr3g0139671 40.000 115 68 1 3 117 72 185 1.89e-21 94.4
Msa0991010 MtrunA17_Chr3g0139671 37.000 100 61 2 16 114 33 131 3.11e-12 66.6
Msa0991010 MtrunA17_Chr4g0058991 41.176 102 59 1 16 117 209 309 3.15e-21 92.8
Msa0991010 MtrunA17_Chr1g0157731 40.000 115 68 1 3 117 78 191 3.50e-21 93.6
Msa0991010 MtrunA17_Chr1g0157731 34.951 103 65 2 13 114 36 137 7.69e-12 65.5
Msa0991010 MtrunA17_Chr5g0425591 46.429 84 44 1 15 97 10 93 3.56e-20 83.2
Msa0991010 MtrunA17_Chr5g0397841 42.202 109 62 1 3 111 97 204 6.28e-20 89.4
Msa0991010 MtrunA17_Chr5g0437321 43.434 99 55 1 16 114 19 116 2.34e-19 85.9
Msa0991010 MtrunA17_Chr7g0238651 37.736 106 64 1 19 122 10 115 4.19e-19 85.9
Msa0991010 MtrunA17_Chr3g0093811 52.778 72 34 0 46 117 14 85 4.74e-19 84.3
Msa0991010 MtrunA17_Chr7g0228531 40.367 109 61 3 16 123 220 325 5.66e-18 83.2
Msa0991010 MtrunA17_Chr6g0453751 46.739 92 40 2 15 97 21 112 4.74e-17 75.9
Msa0991010 MtrunA17_Chr1g0177901 45.977 87 43 2 26 112 7 89 3.05e-16 75.5
Msa0991010 MtrunA17_Chr5g0416341 34.351 131 84 2 5 135 15 143 1.54e-15 76.3
Msa0991010 MtrunA17_Chr7g0228401 38.542 96 58 1 27 122 290 384 5.08e-15 74.7
Msa0991010 MtrunA17_Chr8g0362231 31.967 122 82 1 19 140 25 145 5.51e-15 74.7
Msa0991010 MtrunA17_Chr7g0228481 37.615 109 64 3 16 123 220 325 1.03e-13 70.9
Msa0991010 MtrunA17_Chr5g0434871 59.091 44 18 0 76 119 2 45 2.80e-13 63.9
Msa0991010 MtrunA17_Chr7g0233061 36.709 79 50 0 50 128 211 289 8.92e-13 67.8
Msa0991010 MtrunA17_Chr1g0193901 45.455 88 46 2 13 98 10 97 1.30e-11 60.5
Msa0991010 MtrunA17_Chr1g0193891 45.455 88 46 2 13 98 10 97 1.30e-11 60.5
Msa0991010 MtrunA17_Chr1g0193871 45.455 88 46 2 13 98 10 97 1.30e-11 60.5
Msa0991010 MtrunA17_Chr1g0193881 45.455 88 46 2 13 98 10 97 1.30e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0991010 AT4G25560.1 54.412 204 71 5 9 200 1 194 2.76e-63 201
Msa0991010 AT5G52260.1 51.961 204 65 3 11 200 9 193 1.23e-58 188
Msa0991010 AT3G48920.1 41.887 265 116 7 7 268 11 240 3.34e-57 184
Msa0991010 AT4G01680.3 61.871 139 50 2 1 138 1 137 1.43e-52 172
Msa0991010 AT5G26660.1 67.200 125 38 2 1 125 1 122 7.06e-52 173
Msa0991010 AT1G57560.2 50.270 185 69 5 11 173 9 192 9.21e-52 171
Msa0991010 AT4G01680.1 64.341 129 45 1 11 138 9 137 1.39e-51 172
Msa0991010 AT1G57560.1 70.909 110 32 0 11 120 9 118 2.07e-51 171
Msa0991010 AT1G09540.1 64.341 129 45 1 11 138 9 137 1.38e-50 171
Msa0991010 AT4G01680.2 58.865 141 45 2 11 138 9 149 3.25e-48 164
Msa0991010 AT3G13890.2 64.103 117 40 1 1 117 1 115 4.25e-48 164
Msa0991010 AT1G63910.1 62.393 117 42 1 1 117 1 115 8.06e-48 163
Msa0991010 AT3G12720.1 62.185 119 44 1 11 128 19 137 2.77e-47 160
Msa0991010 AT5G12870.1 64.865 111 39 0 13 123 17 127 3.15e-47 159
Msa0991010 AT4G34990.1 54.483 145 59 2 16 159 14 152 7.12e-47 158
Msa0991010 AT4G12350.1 46.512 172 86 3 15 184 13 180 8.61e-47 158
Msa0991010 AT1G79180.1 60.331 121 48 0 1 121 1 121 5.57e-46 156
Msa0991010 AT5G10280.1 62.385 109 41 0 12 120 10 118 8.19e-46 157
Msa0991010 AT4G38620.1 53.285 137 63 1 9 144 7 143 9.58e-46 155
Msa0991010 AT5G65230.1 62.727 110 41 0 11 120 9 118 1.88e-45 155
Msa0991010 AT3G08500.1 65.741 108 37 0 10 117 26 133 1.96e-45 156
Msa0991010 AT1G06180.1 47.337 169 80 2 11 172 9 175 2.84e-45 153
Msa0991010 AT3G13890.1 59.524 126 40 2 1 117 1 124 5.74e-45 156
Msa0991010 AT1G22640.1 54.962 131 58 1 11 140 9 139 1.53e-44 152
Msa0991010 AT3G12820.1 59.167 120 49 0 1 120 1 120 1.56e-44 151
Msa0991010 AT3G23250.1 58.036 112 47 0 6 117 4 115 1.65e-44 152
Msa0991010 AT4G09460.1 55.469 128 56 1 11 137 9 136 7.34e-44 149
Msa0991010 AT3G01140.2 61.818 110 42 0 11 120 9 118 1.18e-43 152
Msa0991010 AT1G16490.1 59.829 117 47 0 1 117 1 117 1.40e-43 150
Msa0991010 AT4G05100.1 60.000 110 44 0 11 120 10 119 1.51e-43 151
Msa0991010 AT4G21440.1 60.000 110 44 0 11 120 9 118 1.53e-43 152
Msa0991010 AT3G02940.2 59.091 110 45 0 11 120 9 118 1.91e-43 150
Msa0991010 AT1G56160.1 60.684 117 46 0 1 117 1 117 2.03e-43 150
Msa0991010 AT3G01140.1 61.818 110 42 0 11 120 52 161 2.11e-43 152
Msa0991010 AT3G02940.1 59.091 110 45 0 11 120 9 118 3.32e-43 150
Msa0991010 AT3G02940.3 59.091 110 45 0 11 120 9 118 3.32e-43 150
Msa0991010 AT5G16770.4 63.107 103 38 0 15 117 13 115 4.10e-43 150
Msa0991010 AT5G16770.3 63.107 103 38 0 15 117 13 115 4.10e-43 150
Msa0991010 AT5G16600.1 59.633 109 44 0 9 117 7 115 5.60e-43 150
Msa0991010 AT5G54230.1 50.331 151 73 2 15 163 13 163 5.98e-43 149
Msa0991010 AT5G16770.1 63.107 103 38 0 15 117 13 115 6.01e-43 150
Msa0991010 AT5G16770.2 63.107 103 38 0 15 117 13 115 6.01e-43 150
Msa0991010 AT4G22680.1 49.324 148 74 1 9 155 7 154 7.30e-43 147
Msa0991010 AT1G18570.1 52.756 127 59 1 15 140 14 140 7.83e-43 150
Msa0991010 AT2G16720.1 50.658 152 68 3 16 165 14 160 8.33e-43 147
Msa0991010 AT5G15310.4 63.208 106 39 0 15 120 13 118 1.53e-42 146
Msa0991010 AT5G15310.1 63.208 106 39 0 15 120 13 118 2.29e-42 148
Msa0991010 AT5G15310.2 63.208 106 39 0 15 120 13 118 2.68e-42 147
Msa0991010 AT4G28110.1 57.658 111 47 0 11 121 9 119 4.60e-42 146
Msa0991010 AT1G34670.1 62.264 106 40 0 15 120 13 118 1.09e-41 147
Msa0991010 AT2G31180.1 49.306 144 66 1 6 142 4 147 1.21e-41 144
Msa0991010 AT5G35550.1 54.098 122 56 0 1 122 1 122 1.28e-41 144
Msa0991010 AT3G24310.1 62.500 104 39 0 14 117 18 121 1.90e-41 144
Msa0991010 AT1G74430.1 53.175 126 58 1 15 139 13 138 2.53e-41 144
Msa0991010 AT1G66230.1 58.879 107 44 0 11 117 9 115 2.70e-41 144
Msa0991010 AT1G35515.1 45.732 164 86 2 9 169 7 170 2.77e-41 142
Msa0991010 AT5G60890.1 58.036 112 46 1 15 126 13 123 7.74e-41 143
Msa0991010 AT4G13480.1 61.538 104 40 0 14 117 6 109 8.16e-41 142
Msa0991010 AT5G56110.1 60.748 107 42 0 11 117 9 115 1.88e-40 143
Msa0991010 AT4G17785.2 61.165 103 40 0 15 117 14 116 2.06e-40 144
Msa0991010 AT5G61420.2 50.704 142 69 1 15 156 13 153 2.15e-40 144
Msa0991010 AT4G17785.1 61.165 103 40 0 15 117 14 116 2.86e-40 143
Msa0991010 AT5G14750.1 52.941 119 50 1 5 117 1 119 4.01e-40 139
Msa0991010 AT3G30210.1 59.813 107 43 0 15 121 28 134 4.07e-40 141
Msa0991010 AT3G27920.1 55.140 107 48 0 13 119 13 119 5.29e-40 139
Msa0991010 AT3G13540.1 46.207 145 76 2 9 152 18 161 6.72e-40 139
Msa0991010 AT5G52600.1 55.556 108 48 0 10 117 8 115 9.23e-40 137
Msa0991010 AT1G74080.1 58.491 106 44 0 15 120 13 118 1.35e-39 141
Msa0991010 AT3G62610.1 58.036 112 47 0 6 117 4 115 1.84e-39 141
Msa0991010 AT5G07700.1 44.970 169 85 3 15 182 13 174 2.29e-39 140
Msa0991010 AT5G07700.2 44.970 169 85 3 15 182 13 174 2.29e-39 140
Msa0991010 AT1G08810.1 40.367 218 119 4 15 225 13 226 3.01e-39 139
Msa0991010 AT1G79180.2 47.403 154 48 1 1 121 1 154 3.05e-39 140
Msa0991010 AT5G40330.1 55.238 105 47 0 13 117 11 115 4.16e-39 136
Msa0991010 AT3G61250.1 57.009 107 46 0 11 117 9 115 5.51e-39 138
Msa0991010 AT3G47600.1 56.637 113 49 0 11 123 9 121 6.99e-39 139
Msa0991010 AT5G14340.1 56.881 109 47 0 9 117 19 127 8.03e-39 137
Msa0991010 AT5G23000.1 56.637 113 48 1 6 117 4 116 1.14e-38 138
Msa0991010 AT5G07690.1 55.372 121 53 1 15 134 13 133 1.17e-38 139
Msa0991010 AT5G62470.2 57.944 107 45 0 11 117 9 115 1.61e-38 139
Msa0991010 AT5G62320.1 40.782 179 89 5 15 185 14 183 2.15e-38 135
Msa0991010 AT3G01530.1 45.139 144 78 1 6 148 17 160 2.84e-38 134
Msa0991010 AT5G40350.1 43.038 158 85 1 12 164 15 172 4.02e-38 134
Msa0991010 AT2G47460.1 46.667 150 72 1 6 155 4 145 4.22e-38 138
Msa0991010 AT5G49330.1 57.143 112 48 0 6 117 4 115 4.42e-38 137
Msa0991010 AT3G28910.1 57.009 107 46 0 11 117 9 115 8.18e-38 136
Msa0991010 AT3G27810.1 45.070 142 76 2 10 151 16 155 1.47e-37 132
Msa0991010 AT1G18710.1 55.340 103 46 0 15 117 13 115 1.91e-37 134
Msa0991010 AT1G74650.1 56.250 112 49 0 11 122 9 120 2.25e-37 135
Msa0991010 AT5G57620.1 56.637 113 48 1 6 117 4 116 7.47e-37 134
Msa0991010 AT5G62470.1 57.944 107 44 1 11 117 9 114 1.00e-36 134
Msa0991010 AT3G49690.1 54.783 115 51 1 6 119 4 118 1.51e-36 132
Msa0991010 AT5G65790.1 55.752 113 49 1 6 117 4 116 2.57e-36 133
Msa0991010 AT5G59780.3 50.435 115 57 0 8 122 2 116 4.94e-36 129
Msa0991010 AT1G48000.1 54.701 117 47 1 15 125 33 149 7.10e-36 129
Msa0991010 AT2G26960.1 44.203 138 70 2 11 141 17 154 9.57e-36 133
Msa0991010 AT2G36890.1 47.692 130 67 1 6 134 4 133 1.05e-35 130
Msa0991010 AT3G53200.1 56.731 104 45 0 15 118 10 113 1.08e-35 128
Msa0991010 AT2G26950.1 46.491 114 59 1 11 124 13 124 1.97e-35 131
Msa0991010 AT2G36890.2 47.692 130 67 1 6 134 45 174 2.13e-35 130
Msa0991010 AT1G66370.1 47.101 138 68 2 10 143 4 140 3.08e-35 127
Msa0991010 AT1G68320.1 42.949 156 75 2 15 170 20 161 4.42e-35 128
Msa0991010 AT2G47190.1 51.887 106 51 0 12 117 18 123 5.85e-35 127
Msa0991010 AT2G32460.2 43.885 139 78 0 15 153 7 145 9.75e-35 131
Msa0991010 AT2G32460.1 43.885 139 78 0 15 153 19 157 1.02e-34 131
Msa0991010 AT3G28470.1 54.902 102 46 0 11 112 9 110 1.04e-34 127
Msa0991010 AT4G37780.1 50.000 126 62 1 6 130 4 129 1.36e-34 127
Msa0991010 AT3G11440.2 51.852 108 52 0 11 118 38 145 2.78e-34 129
Msa0991010 AT3G11440.3 51.852 108 52 0 11 118 38 145 8.09e-34 129
Msa0991010 AT3G11440.4 51.852 108 52 0 11 118 38 145 8.09e-34 129
Msa0991010 AT3G11440.1 51.852 108 52 0 11 118 38 145 8.09e-34 129
Msa0991010 AT3G46130.1 50.926 108 53 0 15 122 10 117 8.16e-34 124
Msa0991010 AT5G06100.1 52.885 104 49 0 15 118 33 136 4.13e-33 126
Msa0991010 AT4G26930.1 53.922 102 47 0 15 116 20 121 5.49e-33 125
Msa0991010 AT5G06100.5 52.885 104 49 0 15 118 33 136 1.16e-32 125
Msa0991010 AT5G06100.2 52.885 104 49 0 15 118 33 136 1.16e-32 125
Msa0991010 AT5G06100.3 52.885 104 49 0 15 118 33 136 1.16e-32 125
Msa0991010 AT5G06100.4 52.885 104 49 0 15 118 33 136 1.16e-32 125
Msa0991010 AT3G06490.1 55.882 102 45 0 15 116 20 121 1.43e-32 122
Msa0991010 AT5G55020.1 53.922 102 47 0 15 116 27 128 1.53e-32 125
Msa0991010 AT1G25340.1 47.541 122 63 1 15 135 19 140 2.59e-32 120
Msa0991010 AT1G56650.1 34.836 244 146 5 10 253 4 234 3.06e-32 119
Msa0991010 AT5G49620.1 45.638 149 63 3 15 146 27 174 5.28e-32 120
Msa0991010 AT1G66380.1 55.340 103 46 0 15 117 9 111 5.51e-32 115
Msa0991010 AT1G66390.1 54.630 108 49 0 10 117 4 111 9.59e-32 118
Msa0991010 AT5G26660.2 67.901 81 25 1 45 125 12 91 4.40e-31 118
Msa0991010 AT3G53200.2 63.636 77 28 0 42 118 4 80 9.35e-30 112
Msa0991010 AT3G12820.2 70.423 71 21 0 50 120 2 72 1.27e-29 111
Msa0991010 AT5G59780.2 59.494 79 32 0 44 122 17 95 2.56e-29 111
Msa0991010 AT3G60460.1 48.182 110 56 1 8 116 5 114 2.65e-29 113
Msa0991010 AT3G46130.4 59.494 79 32 0 44 122 17 95 3.78e-29 111
Msa0991010 AT3G46130.3 59.740 77 31 0 46 122 9 85 1.18e-28 109
Msa0991010 AT5G35550.2 64.474 76 27 0 47 122 50 125 1.23e-28 110
Msa0991010 AT5G49620.2 41.718 163 63 4 15 146 27 188 2.62e-28 110
Msa0991010 AT1G25340.2 44.000 125 64 2 12 135 16 135 5.13e-28 109
Msa0991010 AT1G25340.3 44.000 125 64 2 12 135 16 135 7.55e-28 109
Msa0991010 AT5G40350.2 43.089 123 65 1 47 164 5 127 1.42e-27 105
Msa0991010 AT3G47600.2 53.061 98 42 1 26 123 22 115 1.97e-27 108
Msa0991010 AT3G27810.2 46.667 105 54 2 47 151 4 106 4.58e-27 103
Msa0991010 AT5G02320.3 46.087 115 61 1 3 117 54 167 1.80e-26 108
Msa0991010 AT5G02320.1 46.087 115 61 1 3 117 114 227 1.99e-26 108
Msa0991010 AT5G02320.2 46.087 115 61 1 3 117 114 227 1.99e-26 108
Msa0991010 AT5G14750.3 61.765 68 26 0 50 117 18 85 2.70e-26 102
Msa0991010 AT1G69560.1 44.037 109 58 2 10 117 101 207 4.04e-26 105
Msa0991010 AT1G69560.2 44.037 109 58 2 10 117 117 223 4.99e-26 105
Msa0991010 AT2G23290.1 50.000 102 50 1 16 117 13 113 1.87e-25 103
Msa0991010 AT1G26780.1 34.302 172 96 5 16 173 98 266 1.95e-25 102
Msa0991010 AT1G26780.2 34.104 173 97 5 16 174 98 267 3.83e-25 103
Msa0991010 AT4G37260.1 49.020 102 51 1 16 117 13 113 8.18e-25 101
Msa0991010 AT3G09230.1 42.063 126 69 2 2 124 41 165 1.03e-24 102
Msa0991010 AT5G67300.1 47.059 102 53 1 16 117 6 106 1.72e-24 100
Msa0991010 AT5G11050.1 31.963 219 123 5 16 234 105 297 1.80e-24 102
Msa0991010 AT2G39880.1 50.450 111 51 3 11 120 46 153 2.28e-24 101
Msa0991010 AT1G17950.1 41.176 102 59 1 16 117 5 105 2.30e-24 99.0
Msa0991010 AT1G73410.1 42.157 102 58 1 16 117 6 106 7.64e-24 97.4
Msa0991010 AT3G50060.1 47.059 102 53 1 16 117 6 106 9.31e-24 98.6
Msa0991010 AT3G55730.1 50.485 103 48 2 16 117 56 156 1.31e-23 99.4
Msa0991010 AT1G73410.2 42.157 102 58 1 16 117 6 106 1.42e-23 95.5
Msa0991010 AT3G09370.2 43.478 115 64 1 3 117 122 235 1.20e-22 97.4
Msa0991010 AT3G09370.1 43.478 115 64 1 3 117 117 230 1.30e-22 97.4
Msa0991010 AT3G09370.3 43.478 115 64 1 3 117 130 243 1.50e-22 97.4
Msa0991010 AT4G32730.1 41.739 115 66 1 3 117 74 187 1.59e-22 97.8
Msa0991010 AT4G32730.1 35.000 100 63 2 16 114 35 133 7.71e-11 62.8
Msa0991010 AT4G32730.5 41.739 115 66 1 3 117 74 187 1.78e-22 97.8
Msa0991010 AT4G32730.5 35.000 100 63 2 16 114 35 133 7.84e-11 63.2
Msa0991010 AT4G32730.4 41.739 115 66 1 3 117 74 187 1.78e-22 97.8
Msa0991010 AT4G32730.4 35.000 100 63 2 16 114 35 133 7.84e-11 63.2
Msa0991010 AT4G32730.3 41.739 115 66 1 3 117 74 187 1.78e-22 97.8
Msa0991010 AT4G32730.3 35.000 100 63 2 16 114 35 133 7.84e-11 63.2
Msa0991010 AT4G32730.2 41.739 115 66 1 3 117 74 187 1.78e-22 97.8
Msa0991010 AT4G32730.2 35.000 100 63 2 16 114 35 133 7.84e-11 63.2
Msa0991010 AT4G25560.2 44.928 138 58 4 71 200 1 128 2.61e-22 92.8
Msa0991010 AT5G58850.1 33.180 217 117 7 16 231 105 294 3.63e-22 95.9
Msa0991010 AT3G23250.2 63.793 58 21 0 60 117 1 58 4.13e-22 92.4
Msa0991010 AT5G17800.1 33.582 134 85 2 16 149 93 222 6.98e-22 93.6
Msa0991010 AT1G66380.3 48.485 99 47 2 46 141 7 104 1.37e-21 87.4
Msa0991010 AT4G18770.1 39.655 116 69 1 7 122 208 322 2.25e-21 93.6
Msa0991010 AT3G27785.1 37.705 122 72 2 5 123 178 298 3.20e-21 93.2
Msa0991010 AT5G11510.3 39.130 115 69 1 3 117 68 181 8.84e-21 92.8
Msa0991010 AT5G11510.1 39.130 115 69 1 3 117 68 181 8.84e-21 92.8
Msa0991010 AT5G11510.4 39.130 115 69 1 3 117 68 181 8.84e-21 92.8
Msa0991010 AT5G11510.5 39.130 115 69 1 3 117 68 181 9.79e-21 92.4
Msa0991010 AT5G11510.2 39.130 115 69 1 3 117 68 181 1.01e-20 92.4
Msa0991010 AT3G29020.1 38.235 102 62 1 16 117 65 165 1.55e-20 88.2
Msa0991010 AT5G40360.1 39.604 101 60 1 16 116 158 257 1.80e-20 90.1
Msa0991010 AT4G33450.1 35.185 108 69 1 11 118 14 120 1.99e-20 88.2
Msa0991010 AT1G71030.1 54.667 75 33 1 46 120 13 86 2.33e-20 87.0
Msa0991010 AT1G71030.2 57.353 68 29 0 53 120 5 72 2.49e-20 86.3
Msa0991010 AT1G22640.3 50.000 82 40 1 60 140 1 82 3.16e-20 86.7
Msa0991010 AT3G29020.2 38.235 102 62 1 16 117 67 167 5.28e-20 88.2
Msa0991010 AT2G25230.1 40.833 120 62 3 9 122 13 129 9.90e-20 86.3
Msa0991010 AT5G39700.1 35.461 141 87 3 11 148 51 190 2.74e-19 84.0
Msa0991010 AT5G14750.4 56.897 58 25 0 60 117 1 58 6.32e-19 81.6
Msa0991010 AT5G14750.2 56.897 58 25 0 60 117 1 58 6.32e-19 81.6
Msa0991010 AT1G66380.2 51.948 77 37 0 15 91 9 85 1.68e-18 79.3
Msa0991010 AT2G37630.1 37.383 107 65 1 19 123 7 113 8.48e-18 82.8
Msa0991010 AT1G18960.1 37.037 108 65 2 10 117 4 108 9.19e-17 79.3
Msa0991010 AT4G00540.2 38.938 113 65 2 8 117 95 206 2.62e-16 78.6
Msa0991010 AT4G00540.1 38.938 113 65 2 8 117 93 204 3.33e-16 78.6
Msa0991010 AT5G40430.1 34.426 122 76 3 9 130 47 164 1.33e-15 75.1
Msa0991010 AT2G02820.3 35.714 112 70 2 19 130 33 142 1.61e-15 75.9
Msa0991010 AT2G02820.1 36.066 122 75 3 10 130 23 142 2.81e-15 75.9
Msa0991010 AT2G02820.2 36.066 122 75 3 10 130 23 142 3.79e-15 75.5
Msa0991010 AT1G14350.2 35.088 114 70 2 19 129 28 140 3.12e-14 72.8
Msa0991010 AT1G14350.1 35.088 114 70 2 19 129 28 140 3.12e-14 72.8
Msa0991010 AT5G59780.1 50.980 51 25 0 72 122 1 51 2.84e-12 64.3
Msa0991010 AT3G46130.2 50.980 51 25 0 72 122 1 51 4.23e-12 64.3
Msa0991010 AT5G61420.1 45.946 74 39 1 83 156 2 74 5.23e-11 62.4

Find 45 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAACTTACCTGCCTTAA+TGG 0.191651 6_4:+54203016 None:intergenic
TCTAAATTCAGATGATTCTT+TGG 0.246451 6_4:-54199377 Msa0991010:CDS
CTGAGCTTGTTATCTTCTTC+AGG 0.272543 6_4:+54203083 None:intergenic
ATCTCGTTGTCGGTCCTTCC+TGG 0.281267 6_4:+54199709 None:intergenic
AGAAACTTACCTGCCTTAAT+GGG 0.308257 6_4:+54203017 None:intergenic
TCTTCACCAAACTGCCCTTC+TGG 0.337772 6_4:+54199298 None:intergenic
CAAAATACAGAAAGGGATTA+TGG 0.347936 6_4:-54203109 Msa0991010:CDS
CTGGAGCTCTGTCCCCATTA+AGG 0.371654 6_4:-54203030 Msa0991010:CDS
TTCCATCATTGTTCAGATAG+TGG 0.397440 6_4:+54199185 None:intergenic
CAACCAGGCTTGCAAAGAAA+TGG 0.403434 6_4:-54202504 Msa0991010:intron
CAAATGCCAGAAGGGCAGTT+TGG 0.406471 6_4:-54199304 Msa0991010:CDS
CTGAGCTTGAGCTAGCATAT+TGG 0.415564 6_4:+54199614 None:intergenic
AGTGTTATAATTCTTTGAAA+TGG 0.417720 6_4:+54199483 None:intergenic
ATGACCCTTCACCACATGTT+AGG 0.441741 6_4:-54202396 Msa0991010:CDS
AAAGAAAGAAGTCAAAAGTA+AGG 0.443608 6_4:-54199659 Msa0991010:CDS
ATCAAAATCAAAATACAGAA+AGG 0.476677 6_4:-54203117 Msa0991010:CDS
AGCATACCTCTCTTTAATCC+TGG 0.479757 6_4:+54202444 None:intergenic
TGAAGCATGGTCATAGCTGC+TGG 0.480012 6_4:-54203049 Msa0991010:CDS
CACTCAGAAAATAAAAGTCT+TGG 0.488305 6_4:+54199433 None:intergenic
ATCCACTATCTGAACAATGA+TGG 0.503889 6_4:-54199187 Msa0991010:CDS
CTCTCTTTAATCCTGGCCTC+AGG 0.515445 6_4:+54202451 None:intergenic
TCAAAATCAAAATACAGAAA+GGG 0.525201 6_4:-54203116 Msa0991010:CDS
TGGATTAACTACCTGAGGCC+AGG 0.525517 6_4:-54202462 Msa0991010:CDS
TGAGCTCTGACAAACATCAT+TGG 0.540080 6_4:+54199459 None:intergenic
ATGGAAAGAGTTGCAGACTA+AGG 0.546510 6_4:-54202485 Msa0991010:CDS
TACTGAGGTGTACTACTCAC+TGG 0.549488 6_4:-54199245 Msa0991010:CDS
CAGATTGCACAACAATTGCC+AGG 0.552351 6_4:-54199727 Msa0991010:CDS
AGTTGAGAGTAAGGAGTCCA+TGG 0.554846 6_4:+54199588 None:intergenic
AGCTCTGTCCCCATTAAGGC+AGG 0.567757 6_4:-54203026 Msa0991010:intron
TTGCACAACAATTGCCAGGA+AGG 0.583614 6_4:-54199723 Msa0991010:CDS
GAAAGAGTTGCAGACTAAGG+TGG 0.587797 6_4:-54202482 Msa0991010:CDS
TGTTGCCTAACATGTGGTGA+AGG 0.591847 6_4:+54202391 None:intergenic
ATGCTATTCAAATGCCAGAA+GGG 0.601992 6_4:-54199312 Msa0991010:CDS
GGATCAGTTATCAAATCAAG+TGG 0.610564 6_4:-54199224 Msa0991010:CDS
AGTGATTATATAATGAAGCA+TGG 0.618334 6_4:-54203062 Msa0991010:CDS
AATTCAAAATCTAGATACTG+AGG 0.628820 6_4:-54199260 Msa0991010:CDS
AGGTATGCTCAGCAAACATG+AGG 0.642467 6_4:-54202430 Msa0991010:CDS
TAGCTCAAGCTCAGATACCA+TGG 0.645484 6_4:-54199605 Msa0991010:CDS
GAAACTTACCTGCCTTAATG+GGG 0.649031 6_4:+54203018 None:intergenic
AATGCTATTCAAATGCCAGA+AGG 0.656202 6_4:-54199313 Msa0991010:CDS
TAAGGTGGATTAACTACCTG+AGG 0.663506 6_4:-54202467 Msa0991010:CDS
CTGAGGCCAGGATTAAAGAG+AGG 0.669840 6_4:-54202450 Msa0991010:CDS
GTTGCCTAACATGTGGTGAA+GGG 0.673915 6_4:+54202392 None:intergenic
CTTACTTGTTGCCTAACATG+TGG 0.706482 6_4:+54202385 None:intergenic
TCACTAGATCAAGTAAACTG+TGG 0.709539 6_4:-54199406 Msa0991010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTTAAAAACGTT+AGG + chr6_4:54199557-54199576 None:intergenic 10.0%
!! TTTACATTAAATAATGTAAT+TGG - chr6_4:54200206-54200225 Msa0991010:intron 10.0%
!!! CCTTTTATTAATTTTTAAAT+AGG + chr6_4:54200278-54200297 None:intergenic 10.0%
!! CCTATTTAAAAATTAATAAA+AGG - chr6_4:54200275-54200294 Msa0991010:intron 10.0%
!! TTACATTATGTTTAAAAAAT+GGG + chr6_4:54200337-54200356 None:intergenic 10.0%
!! TTTACATTATGTTTAAAAAA+TGG + chr6_4:54200338-54200357 None:intergenic 10.0%
!! AAAAAAAATTAATTCCTACA+AGG - chr6_4:54199625-54199644 Msa0991010:CDS 15.0%
!!! ATTTTAAAAAAGTAAAAGTG+AGG + chr6_4:54199967-54199986 None:intergenic 15.0%
!!! TCTCTAATATTATTTTAAGT+AGG + chr6_4:54200244-54200263 None:intergenic 15.0%
!! AATAAAAGGAAAAAATTGAT+AGG - chr6_4:54200289-54200308 Msa0991010:intron 15.0%
!! TAAACATAATGTAAAAAGAA+AGG - chr6_4:54200343-54200362 Msa0991010:intron 15.0%
!!! TGATTTGATTTAAGAAATTA+AGG + chr6_4:54200386-54200405 None:intergenic 15.0%
!!! GAATTTATCTTTGTTTTAAA+TGG - chr6_4:54200593-54200612 Msa0991010:intron 15.0%
!! TTTACAATAGTTGAAAAATA+TGG - chr6_4:54202474-54202493 Msa0991010:CDS 15.0%
!! ATCAAAATCAAAATACAGAA+AGG - chr6_4:54199200-54199219 Msa0991010:CDS 20.0%
!! TCAAAATCAAAATACAGAAA+GGG - chr6_4:54199201-54199220 Msa0991010:CDS 20.0%
!! TAATCCCTTATCAATTATAT+TGG - chr6_4:54199344-54199363 Msa0991010:CDS 20.0%
!! GTAAAAATCAAGGAATAAAA+AGG - chr6_4:54199482-54199501 Msa0991010:CDS 20.0%
!!! TTCTTCAAACACATATTTTT+AGG + chr6_4:54199709-54199728 None:intergenic 20.0%
!! ACAATTTAATATTTAACCCA+AGG - chr6_4:54200109-54200128 Msa0991010:intron 20.0%
!! CAATTTAATATTTAACCCAA+GGG - chr6_4:54200110-54200129 Msa0991010:intron 20.0%
!! AATTTAATATTTAACCCAAG+GGG - chr6_4:54200111-54200130 Msa0991010:intron 20.0%
!! AAATTAATCATTGTATGTGA+TGG + chr6_4:54200441-54200460 None:intergenic 20.0%
!! TATTACATCATATAAACCTT+AGG + chr6_4:54200572-54200591 None:intergenic 20.0%
!!! ATAAAGAACATTTTTGCATA+TGG + chr6_4:54200668-54200687 None:intergenic 20.0%
!! ACTTAATAACATAAAATCAC+AGG - chr6_4:54200706-54200725 Msa0991010:intron 20.0%
!! TAATGTAACATAGAAACTTT+GGG + chr6_4:54200882-54200901 None:intergenic 20.0%
!! ATAATGTAACATAGAAACTT+TGG + chr6_4:54200883-54200902 None:intergenic 20.0%
!! TAAAACAAACTAGATTACTT+TGG + chr6_4:54202402-54202421 None:intergenic 20.0%
!!! ATAATTTTTAATCTCGTTGT+CGG + chr6_4:54202621-54202640 None:intergenic 20.0%
!! ACAACGAGATTAAAAATTAT+TGG - chr6_4:54202621-54202640 Msa0991010:intron 20.0%
!!! TTTTCTAACAACACATATTT+AGG + chr6_4:54202776-54202795 None:intergenic 20.0%
!!! AGTGTTATAATTCTTTGAAA+TGG + chr6_4:54202837-54202856 None:intergenic 20.0%
! AGTGATTATATAATGAAGCA+TGG - chr6_4:54199255-54199274 Msa0991010:CDS 25.0%
! GCTACCAATATAATTGATAA+GGG + chr6_4:54199351-54199370 None:intergenic 25.0%
! TGCTACCAATATAATTGATA+AGG + chr6_4:54199352-54199371 None:intergenic 25.0%
! ATGAATTCAATGAAGATATG+AGG + chr6_4:54199379-54199398 None:intergenic 25.0%
!!! AGGTTGTTTTGTAAAAATCA+AGG - chr6_4:54199472-54199491 Msa0991010:CDS 25.0%
! AAAATCAAGGAATAAAAAGG+AGG - chr6_4:54199485-54199504 Msa0991010:CDS 25.0%
! AAAAATTAATTCCTACAAGG+TGG - chr6_4:54199628-54199647 Msa0991010:CDS 25.0%
! AAAATTAATTCCTACAAGGT+GGG - chr6_4:54199629-54199648 Msa0991010:CDS 25.0%
!! AGGTCTTATCTTATCAAATA+TGG + chr6_4:54199689-54199708 None:intergenic 25.0%
! TTTGAAAATGTGTTTATGAG+TGG + chr6_4:54199732-54199751 None:intergenic 25.0%
! AACTATTCTCATCCAATATT+AGG - chr6_4:54199750-54199769 Msa0991010:intron 25.0%
! TTGGTTAAAAGTCCTAATAT+TGG + chr6_4:54199765-54199784 None:intergenic 25.0%
!!! TATTTTAAGTAGGAATTAGC+TGG + chr6_4:54200234-54200253 None:intergenic 25.0%
! ATGTAAAAAGAAAGGACATA+TGG - chr6_4:54200351-54200370 Msa0991010:intron 25.0%
! TCGTAGCAAAATTATGATTA+TGG + chr6_4:54200512-54200531 None:intergenic 25.0%
! TTGACTTTCTATTCCAAATT+TGG + chr6_4:54200739-54200758 None:intergenic 25.0%
! ATTCTAGACTCTATCAAATA+GGG + chr6_4:54200770-54200789 None:intergenic 25.0%
! TATTCTAGACTCTATCAAAT+AGG + chr6_4:54200771-54200790 None:intergenic 25.0%
! AACTTGAATAGTTTAAGTCT+TGG + chr6_4:54201021-54201040 None:intergenic 25.0%
! AGATAAAACAAGGATTGATT+GGG + chr6_4:54201231-54201250 None:intergenic 25.0%
! TTTAATCGTATAGTAAAGCA+TGG + chr6_4:54201262-54201281 None:intergenic 25.0%
! TTGTTAAATAGTCTCTTGTA+GGG + chr6_4:54201296-54201315 None:intergenic 25.0%
! TTTGTTAAATAGTCTCTTGT+AGG + chr6_4:54201297-54201316 None:intergenic 25.0%
! AAAAGAAAAAAACTATGCCT+TGG - chr6_4:54201314-54201333 Msa0991010:intron 25.0%
! AAAGAAAAAAACTATGCCTT+GGG - chr6_4:54201315-54201334 Msa0991010:intron 25.0%
!! AAGAGAATAATGAGGAATTT+TGG - chr6_4:54202057-54202076 Msa0991010:intron 25.0%
! TTTGGTAAATGTTCATAGAA+GGG + chr6_4:54202102-54202121 None:intergenic 25.0%
! ATTTGGTAAATGTTCATAGA+AGG + chr6_4:54202103-54202122 None:intergenic 25.0%
! ATTCATCGTATCATAAAAAG+CGG - chr6_4:54202165-54202184 Msa0991010:intron 25.0%
!!! AGTTGAAAATGTGCTATTTT+TGG - chr6_4:54202228-54202247 Msa0991010:intron 25.0%
!!! GTTGAAAATGTGCTATTTTT+GGG - chr6_4:54202229-54202248 Msa0991010:intron 25.0%
!!! TTGAAAATGTGCTATTTTTG+GGG - chr6_4:54202230-54202249 Msa0991010:intron 25.0%
! GTATATTACGTGAATAATAC+TGG - chr6_4:54202502-54202521 Msa0991010:intron 25.0%
! AAAGAAAGAAGTCAAAAGTA+AGG - chr6_4:54202658-54202677 Msa0991010:intron 25.0%
!!! ATATTTTTGAGTTGAGAGTA+AGG + chr6_4:54202741-54202760 None:intergenic 25.0%
! TCTAAATTCAGATGATTCTT+TGG - chr6_4:54202940-54202959 Msa0991010:intron 25.0%
! AATTCAAAATCTAGATACTG+AGG - chr6_4:54203057-54203076 Msa0991010:CDS 25.0%
CAAAATACAGAAAGGGATTA+TGG - chr6_4:54199208-54199227 Msa0991010:CDS 30.0%
TTAAAAGACGTGTAGAAAGA+GGG + chr6_4:54199453-54199472 None:intergenic 30.0%
TCTCGTTTAATTGTTTCGAT+GGG - chr6_4:54200183-54200202 Msa0991010:intron 30.0%
TATGGTGTATATGTGTGTAT+AGG + chr6_4:54200650-54200669 None:intergenic 30.0%
ATACTTCGTTTGACAAACTT+TGG + chr6_4:54200910-54200929 None:intergenic 30.0%
TCAAGTTAATTCCTTTACCT+CGG - chr6_4:54201034-54201053 Msa0991010:intron 30.0%
TACATGTTCATCTTGTTCAT+AGG - chr6_4:54201088-54201107 Msa0991010:intron 30.0%
CAAGCAAATATCTAGTAAGA+GGG + chr6_4:54201205-54201224 None:intergenic 30.0%
GAGATAAAACAAGGATTGAT+TGG + chr6_4:54201232-54201251 None:intergenic 30.0%
AAGAAAAAAACTATGCCTTG+GGG - chr6_4:54201316-54201335 Msa0991010:intron 30.0%
! CACTTTGTGAAGAAGAATTT+TGG + chr6_4:54201612-54201631 None:intergenic 30.0%
! AAGTATAGAAAGCATAGCAA+TGG - chr6_4:54201700-54201719 Msa0991010:intron 30.0%
!! AGAGAGTACATGAACTTTTA+GGG + chr6_4:54201753-54201772 None:intergenic 30.0%
! CACCTTTAGAAAGTTTATAG+TGG - chr6_4:54201822-54201841 Msa0991010:intron 30.0%
AGCCACTATAAACTTTCTAA+AGG + chr6_4:54201827-54201846 None:intergenic 30.0%
AGAAAGTGAAGAGAATAATG+AGG - chr6_4:54202049-54202068 Msa0991010:intron 30.0%
! AAGGGCTATAAAAGGATTTT+AGG + chr6_4:54202084-54202103 None:intergenic 30.0%
! ATTATTCGCGTTTAAGACTA+GGG + chr6_4:54202129-54202148 None:intergenic 30.0%
TTCATCGTATCATAAAAAGC+GGG - chr6_4:54202166-54202185 Msa0991010:intron 30.0%
GGACGGAGAAAATATTAAAT+AGG + chr6_4:54202381-54202400 None:intergenic 30.0%
ACAAACTAGATTACTTTGGA+CGG + chr6_4:54202398-54202417 None:intergenic 30.0%
!! CAAAACTGCTTAACTTGTAT+TGG - chr6_4:54202556-54202575 Msa0991010:intron 30.0%
CACTCAGAAAATAAAAGTCT+TGG + chr6_4:54202887-54202906 None:intergenic 30.0%
!!! CAAGACTTTTATTTTCTGAG+TGG - chr6_4:54202885-54202904 Msa0991010:intron 30.0%
!! GATTCTTTGGTCTTGAAAAA+TGG - chr6_4:54202953-54202972 Msa0991010:intron 30.0%
AGAAACTTACCTGCCTTAAT+GGG + chr6_4:54199303-54199322 None:intergenic 35.0%
AAGAAACTTACCTGCCTTAA+TGG + chr6_4:54199304-54199323 None:intergenic 35.0%
AGAAAGAGGGGAAAATACTT+GGG + chr6_4:54199440-54199459 None:intergenic 35.0%
TAGAAAGAGGGGAAAATACT+TGG + chr6_4:54199441-54199460 None:intergenic 35.0%
TAAAAGACGTGTAGAAAGAG+GGG + chr6_4:54199452-54199471 None:intergenic 35.0%
CTTAAAAGACGTGTAGAAAG+AGG + chr6_4:54199454-54199473 None:intergenic 35.0%
! CTCTTTCTACACGTCTTTTA+AGG - chr6_4:54199452-54199471 Msa0991010:CDS 35.0%
!!! TTTAGTTTTTATGCCGACGA+TGG + chr6_4:54199526-54199545 None:intergenic 35.0%
TAAATACAAACCCACCTTGT+AGG + chr6_4:54199642-54199661 None:intergenic 35.0%
! AGGACTTTTAACCAATGTTG+AGG - chr6_4:54199770-54199789 Msa0991010:intron 35.0%
ACATAGTACATTGAACAACC+AGG - chr6_4:54199798-54199817 Msa0991010:intron 35.0%
GTCTCGTTTAATTGTTTCGA+TGG - chr6_4:54200182-54200201 Msa0991010:intron 35.0%
AAAATGGGAATGCTAAGTCA+TGG + chr6_4:54200322-54200341 None:intergenic 35.0%
TAAAAGTGAGCTTACACCTA+AGG - chr6_4:54200553-54200572 Msa0991010:intron 35.0%
AATGTGCGCTAAACTGATAT+TGG - chr6_4:54200796-54200815 Msa0991010:intron 35.0%
TTCATGGAATCTTCTTGATG+TGG + chr6_4:54200986-54201005 None:intergenic 35.0%
! TTGGATTGATCGAGTTTTCA+TGG + chr6_4:54201002-54201021 None:intergenic 35.0%
ACATGTATGAGATTTACCCT+GGG + chr6_4:54201075-54201094 None:intergenic 35.0%
AACATGTATGAGATTTACCC+TGG + chr6_4:54201076-54201095 None:intergenic 35.0%
GCAAGCAAATATCTAGTAAG+AGG + chr6_4:54201206-54201225 None:intergenic 35.0%
! TATAGTAAAGCATGGCTTGT+GGG + chr6_4:54201254-54201273 None:intergenic 35.0%
! TCTTTTGACGTACTTTGGTT+CGG + chr6_4:54201389-54201408 None:intergenic 35.0%
! TCATCTCTTTTGACGTACTT+TGG + chr6_4:54201394-54201413 None:intergenic 35.0%
! TAGAAAGCATAGCAATGGAA+AGG - chr6_4:54201705-54201724 Msa0991010:intron 35.0%
! AGAAAGCATAGCAATGGAAA+GGG - chr6_4:54201706-54201725 Msa0991010:intron 35.0%
!! GAGAGAGTACATGAACTTTT+AGG + chr6_4:54201754-54201773 None:intergenic 35.0%
!! CTTGTTTTCTTGTTTGCTAG+AGG + chr6_4:54201887-54201906 None:intergenic 35.0%
GTTCATAGAAGGGCTATAAA+AGG + chr6_4:54202092-54202111 None:intergenic 35.0%
! GTTTAAGACTAGGGGTAATT+TGG + chr6_4:54202120-54202139 None:intergenic 35.0%
! TTATTCGCGTTTAAGACTAG+GGG + chr6_4:54202128-54202147 None:intergenic 35.0%
! GATTATTCGCGTTTAAGACT+AGG + chr6_4:54202130-54202149 None:intergenic 35.0%
ACTACTAGTCGCTAATCTAT+TGG + chr6_4:54202324-54202343 None:intergenic 35.0%
TCACTAGATCAAGTAAACTG+TGG - chr6_4:54202911-54202930 Msa0991010:intron 35.0%
AATGCTATTCAAATGCCAGA+AGG - chr6_4:54203004-54203023 Msa0991010:intron 35.0%
ATGCTATTCAAATGCCAGAA+GGG - chr6_4:54203005-54203024 Msa0991010:intron 35.0%
GGATCAGTTATCAAATCAAG+TGG - chr6_4:54203093-54203112 Msa0991010:CDS 35.0%
ATCCACTATCTGAACAATGA+TGG - chr6_4:54203130-54203149 Msa0991010:CDS 35.0%
TTCCATCATTGTTCAGATAG+TGG + chr6_4:54203135-54203154 None:intergenic 35.0%
!! CTGAGCTTGTTATCTTCTTC+AGG + chr6_4:54199237-54199256 None:intergenic 40.0%
GAAACTTACCTGCCTTAATG+GGG + chr6_4:54199302-54199321 None:intergenic 40.0%
TTTCCATTTCTTTGCAAGCC+TGG + chr6_4:54199819-54199838 None:intergenic 40.0%
ATGGAAAGAGTTGCAGACTA+AGG - chr6_4:54199832-54199851 Msa0991010:intron 40.0%
!! TAAGGTGGATTAACTACCTG+AGG - chr6_4:54199850-54199869 Msa0991010:intron 40.0%
AGCATACCTCTCTTTAATCC+TGG + chr6_4:54199876-54199895 None:intergenic 40.0%
! CTTACTTGTTGCCTAACATG+TGG + chr6_4:54199935-54199954 None:intergenic 40.0%
CACATGTTAGGCAACAAGTA+AGG - chr6_4:54199933-54199952 Msa0991010:intron 40.0%
TATTTAACCCAAGGGGTAGT+TGG - chr6_4:54200118-54200137 Msa0991010:intron 40.0%
AATTACACCAACTACCCCTT+GGG + chr6_4:54200128-54200147 None:intergenic 40.0%
TAATTACACCAACTACCCCT+TGG + chr6_4:54200129-54200148 None:intergenic 40.0%
! TGGAAGCACACAAAATGTGA+TGG - chr6_4:54200613-54200632 Msa0991010:intron 40.0%
CACAGGTCAGTTTCCAAATT+TGG - chr6_4:54200723-54200742 Msa0991010:intron 40.0%
CGACATTAAGTCGAGAGTTT+AGG - chr6_4:54200845-54200864 Msa0991010:intron 40.0%
ATGTATGAGATTTACCCTGG+GGG + chr6_4:54201073-54201092 None:intergenic 40.0%
CATGTATGAGATTTACCCTG+GGG + chr6_4:54201074-54201093 None:intergenic 40.0%
AATTCTCGACAACTAAGTCG+AGG - chr6_4:54201167-54201186 Msa0991010:intron 40.0%
GTATAGTAAAGCATGGCTTG+TGG + chr6_4:54201255-54201274 None:intergenic 40.0%
GAAGGGTCTACGTTTATAGA+AGG - chr6_4:54201348-54201367 Msa0991010:intron 40.0%
ATGGTGTCTCTAGTAACGAT+AGG - chr6_4:54201643-54201662 Msa0991010:intron 40.0%
! GAAAGCATAGCAATGGAAAG+GGG - chr6_4:54201707-54201726 Msa0991010:intron 40.0%
AGCATTAACACACTAACCCT+TGG - chr6_4:54201779-54201798 Msa0991010:intron 40.0%
GCATTAACACACTAACCCTT+GGG - chr6_4:54201780-54201799 Msa0991010:intron 40.0%
AGGTAGAGATAGTTAGGGTT+TGG + chr6_4:54201867-54201886 None:intergenic 40.0%
GCTAGAGGTAGAGATAGTTA+GGG + chr6_4:54201872-54201891 None:intergenic 40.0%
TGCTAGAGGTAGAGATAGTT+AGG + chr6_4:54201873-54201892 None:intergenic 40.0%
TACAAACACCAACTCTTGCA+AGG - chr6_4:54201920-54201939 Msa0991010:intron 40.0%
GTTGAAATCCTTGCAAGAGT+TGG + chr6_4:54201931-54201950 None:intergenic 40.0%
CTCTTGCAAGGATTTCAACT+TGG - chr6_4:54201932-54201951 Msa0991010:intron 40.0%
! GACCGATTTCTTAGAGAGAA+GGG - chr6_4:54201995-54202014 Msa0991010:intron 40.0%
! CTCCCTTCTCTCTAAGAAAT+CGG + chr6_4:54202000-54202019 None:intergenic 40.0%
CTCTTCACTTTCTCTCTCTA+GGG + chr6_4:54202042-54202061 None:intergenic 40.0%
TCTCTTCACTTTCTCTCTCT+AGG + chr6_4:54202043-54202062 None:intergenic 40.0%
!! CTGCTTAACTTGTATTGGTC+AGG - chr6_4:54202561-54202580 Msa0991010:intron 40.0%
!! CTTAACTTGTATTGGTCAGG+TGG - chr6_4:54202564-54202583 Msa0991010:intron 40.0%
! TGAGCTCTGACAAACATCAT+TGG + chr6_4:54202861-54202880 None:intergenic 40.0%
AAGAGTTCGATCTCCATCGT+CGG - chr6_4:54199510-54199529 Msa0991010:CDS 45.0%
CTATGTCAGCACCTCAACAT+TGG + chr6_4:54199784-54199803 None:intergenic 45.0%
CAACCAGGCTTGCAAAGAAA+TGG - chr6_4:54199813-54199832 Msa0991010:intron 45.0%
GAAAGAGTTGCAGACTAAGG+TGG - chr6_4:54199835-54199854 Msa0991010:intron 45.0%
AGGTATGCTCAGCAAACATG+AGG - chr6_4:54199887-54199906 Msa0991010:intron 45.0%
ATGACCCTTCACCACATGTT+AGG - chr6_4:54199921-54199940 Msa0991010:intron 45.0%
GTTGCCTAACATGTGGTGAA+GGG + chr6_4:54199928-54199947 None:intergenic 45.0%
TGTTGCCTAACATGTGGTGA+AGG + chr6_4:54199929-54199948 None:intergenic 45.0%
GGCTTGTGGGAGATAAAACA+AGG + chr6_4:54201241-54201260 None:intergenic 45.0%
!! CCTTGGGGACTAGTTATGAA+GGG - chr6_4:54201331-54201350 Msa0991010:intron 45.0%
AAGAGATGAAACGAGCGAAC+AGG - chr6_4:54201405-54201424 Msa0991010:intron 45.0%
AGAGATGAAACGAGCGAACA+GGG - chr6_4:54201406-54201425 Msa0991010:intron 45.0%
CTTCTTCACAAAGTGACCCA+AGG - chr6_4:54201617-54201636 Msa0991010:intron 45.0%
ACAAAGTGACCCAAGGCATA+TGG - chr6_4:54201624-54201643 Msa0991010:intron 45.0%
CTAGAGACACCATATGCCTT+GGG + chr6_4:54201636-54201655 None:intergenic 45.0%
ACTAGAGACACCATATGCCT+TGG + chr6_4:54201637-54201656 None:intergenic 45.0%
CCAAGCTAGATACTACCCAA+GGG + chr6_4:54201798-54201817 None:intergenic 45.0%
TCCAAGCTAGATACTACCCA+AGG + chr6_4:54201799-54201818 None:intergenic 45.0%
! GGTTTGGTTGTGTTGAAGCT+TGG + chr6_4:54201851-54201870 None:intergenic 45.0%
TCAAGCAAAGAGTGAGAGAG+TGG - chr6_4:54201973-54201992 Msa0991010:intron 45.0%
! GGACCGATTTCTTAGAGAGA+AGG - chr6_4:54201994-54202013 Msa0991010:intron 45.0%
GCGAATAATCTATCGTCGTC+AGG - chr6_4:54202140-54202159 Msa0991010:intron 45.0%
CAGATTGCACAACAATTGCC+AGG - chr6_4:54202590-54202609 Msa0991010:intron 45.0%
TTGCACAACAATTGCCAGGA+AGG - chr6_4:54202594-54202613 Msa0991010:intron 45.0%
CTGAGCTTGAGCTAGCATAT+TGG + chr6_4:54202706-54202725 None:intergenic 45.0%
TAGCTCAAGCTCAGATACCA+TGG - chr6_4:54202712-54202731 Msa0991010:intron 45.0%
AGTTGAGAGTAAGGAGTCCA+TGG + chr6_4:54202732-54202751 None:intergenic 45.0%
TACTGAGGTGTACTACTCAC+TGG - chr6_4:54203072-54203091 Msa0991010:CDS 45.0%
!!! TAGTAATATTTTTTTTTTTT+TGG + chr6_4:54202351-54202370 None:intergenic 5.0%
TGAAGCATGGTCATAGCTGC+TGG - chr6_4:54199268-54199287 Msa0991010:CDS 50.0%
TGGATTAACTACCTGAGGCC+AGG - chr6_4:54199855-54199874 Msa0991010:intron 50.0%
CTCTCTTTAATCCTGGCCTC+AGG + chr6_4:54199869-54199888 None:intergenic 50.0%
CTGAGGCCAGGATTAAAGAG+AGG - chr6_4:54199867-54199886 Msa0991010:intron 50.0%
CGATCAAGGATCCGAGGTAA+AGG + chr6_4:54201048-54201067 None:intergenic 50.0%
!! GCCTTGGGGACTAGTTATGA+AGG - chr6_4:54201330-54201349 Msa0991010:intron 50.0%
CCCTTCATAACTAGTCCCCA+AGG + chr6_4:54201334-54201353 None:intergenic 50.0%
CCCTTGGGTAGTATCTAGCT+TGG - chr6_4:54201795-54201814 Msa0991010:intron 50.0%
CAAATGCCAGAAGGGCAGTT+TGG - chr6_4:54203013-54203032 Msa0991010:intron 50.0%
TCTTCACCAAACTGCCCTTC+TGG + chr6_4:54203022-54203041 None:intergenic 50.0%
CTGGAGCTCTGTCCCCATTA+AGG - chr6_4:54199287-54199306 Msa0991010:CDS 55.0%
AGCTCTGTCCCCATTAAGGC+AGG - chr6_4:54199291-54199310 Msa0991010:CDS 55.0%
GATCCTTGATCGATCCCCCA+GGG - chr6_4:54201056-54201075 Msa0991010:intron 55.0%
TTACCCTGGGGGATCGATCA+AGG + chr6_4:54201062-54201081 None:intergenic 55.0%
CGAGCGTGAAGAGCAGAATG+GGG + chr6_4:54201521-54201540 None:intergenic 55.0%
GCGAGCGTGAAGAGCAGAAT+GGG + chr6_4:54201522-54201541 None:intergenic 55.0%
CTAACTCGCTACGACGAGCA+TGG + chr6_4:54201555-54201574 None:intergenic 55.0%
ATCTCGTTGTCGGTCCTTCC+TGG + chr6_4:54202611-54202630 None:intergenic 55.0%
GGGGATCGATCAAGGATCCG+AGG + chr6_4:54201054-54201073 None:intergenic 60.0%
GGATCCTTGATCGATCCCCC+AGG - chr6_4:54201055-54201074 Msa0991010:intron 60.0%
TGGCGAGTAGCTACTCGCCT+TGG - chr6_4:54201473-54201492 Msa0991010:intron 60.0%
CGAGTAGCTACTCGCCTTGG+CGG - chr6_4:54201476-54201495 Msa0991010:intron 60.0%
GAGTAGCTACTCGCCTTGGC+GGG - chr6_4:54201477-54201496 Msa0991010:intron 60.0%
GCGTGAAGAGCAGAATGGGG+TGG + chr6_4:54201518-54201537 None:intergenic 60.0%
GGCGAGCGTGAAGAGCAGAA+TGG + chr6_4:54201523-54201542 None:intergenic 60.0%
GCCACCATTCACTCGCCTCG+CGG - chr6_4:54201434-54201453 Msa0991010:intron 65.0%
CCACCATTCACTCGCCTCGC+GGG - chr6_4:54201435-54201454 Msa0991010:intron 65.0%
TCACCCGCGAGGCGAGTGAA+TGG + chr6_4:54201441-54201460 None:intergenic 65.0%
TGCGAGTAAGCTCACCCGCG+AGG + chr6_4:54201452-54201471 None:intergenic 65.0%
GCGGGTGAGCTTACTCGCAG+TGG - chr6_4:54201453-54201472 Msa0991010:intron 65.0%
!! CTACTCGCCTTGGCGGGCTT+GGG - chr6_4:54201483-54201502 Msa0991010:intron 65.0%
!! TACTCGCCTTGGCGGGCTTG+GGG - chr6_4:54201484-54201503 Msa0991010:intron 65.0%
CCCGCGAGGCGAGTGAATGG+TGG + chr6_4:54201438-54201457 None:intergenic 70.0%
!! GCTACTCGCCTTGGCGGGCT+TGG - chr6_4:54201482-54201501 Msa0991010:intron 70.0%
!! ACTCGCCTTGGCGGGCTTGG+GGG - chr6_4:54201485-54201504 Msa0991010:intron 70.0%
CGACGAGCATGGAGCTCGCG+AGG + chr6_4:54201544-54201563 None:intergenic 70.0%
GCTTGCCCCCAAGCCCGCCA+AGG + chr6_4:54201493-54201512 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 54199174 54203165 54199174 ID=Msa0991010;Name=Msa0991010
chr6_4 mRNA 54199174 54203165 54199174 ID=Msa0991010-mRNA-1;Parent=Msa0991010;Name=Msa0991010-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|1|1|3|0|283
chr6_4 exon 54203027 54203165 54203027 ID=Msa0991010-mRNA-1:exon:11153;Parent=Msa0991010-mRNA-1
chr6_4 exon 54202390 54202519 54202390 ID=Msa0991010-mRNA-1:exon:11152;Parent=Msa0991010-mRNA-1
chr6_4 exon 54199174 54199756 54199174 ID=Msa0991010-mRNA-1:exon:11151;Parent=Msa0991010-mRNA-1
chr6_4 CDS 54203027 54203165 54203027 ID=Msa0991010-mRNA-1:cds;Parent=Msa0991010-mRNA-1
chr6_4 CDS 54202390 54202519 54202390 ID=Msa0991010-mRNA-1:cds;Parent=Msa0991010-mRNA-1
chr6_4 CDS 54199174 54199756 54199174 ID=Msa0991010-mRNA-1:cds;Parent=Msa0991010-mRNA-1
Gene Sequence

>Msa0991010

ATGGGATTTCATCTAGCAGAAAAAGTATCAAAATCAAAATACAGAAAGGGATTATGGTCACCTGAAGAAGATAACAAGCTCAGTGATTATATAATGAAGCATGGTCATAGCTGCTGGAGCTCTGTCCCCATTAAGGCAGGCTTGCAAAGAAATGGAAAGAGTTGCAGACTAAGGTGGATTAACTACCTGAGGCCAGGATTAAAGAGAGGTATGCTCAGCAAACATGAGGAAGATAAAATCATGACCCTTCACCACATGTTAGGCAACAAGTGGTCTCAGATTGCACAACAATTGCCAGGAAGGACCGACAACGAGATTAAAAATTATTGGCATTCATATCTGAAAAAGAAAGAAGTCAAAAGTAAGGATATTGAATCTCATAATCAAATCCAATATGCTAGCTCAAGCTCAGATACCATGGACTCCTTACTCTCAACTCAAAAATATAAAATTCAAGATCCTAAATATGTGTTGTTAGAAAACATTAACAAATCAACAGCTACAACACATTCTGATCACTCCATTTCAAAGAATTATAACACTGCCAATGATGTTTGTCAGAGCTCATTACCAAGACTTTTATTTTCTGAGTGGCTCTCACTAGATCAAGTAAACTGTGGCAACTCTCTAAATTCAGATGATTCTTTGGTCTTGAAAAATGGCTATGATCAAAATTTAATTTTTCAAGAAAATGCTATTCAAATGCCAGAAGGGCAGTTTGGTGAAGAGTATCATGATAGTTTAATTCAAAATCTAGATACTGAGGTGTACTACTCACTGGATCAGTTATCAAATCAAGTGGATGAAAATGAATTGATCCACTATCTGAACAATGATGGAATGTATGTATGA
Protein sequence

>Msa0991010

MGFHLAEKVSKSKYRKGLWSPEEDNKLSDYIMKHGHSCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGMLSKHEEDKIMTLHHMLGNKWSQIAQQLPGRTDNEIKNYWHSYLKKKEVKSKDIESHNQIQYASSSSDTMDSLLSTQKYKIQDPKYVLLENINKSTATTHSDHSISKNYNTANDVCQSSLPRLLFSEWLSLDQVNCGNSLNSDDSLVLKNGYDQNLIFQENAIQMPEGQFGEEYHDSLIQNLDTEVYYSLDQLSNQVDENELIHYLNNDGMYV*