Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0400060 | AMP17768.1 | 97.426 | 544 | 10 | 1 | 1 | 544 | 1 | 540 | 0.0 | 1063 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0400060 | sp|Q9SFB0|DTX43_ARATH | 63.138 | 529 | 174 | 5 | 14 | 541 | 12 | 520 | 0.0 | 611 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0400060 | A0A1S5QNQ4 | 97.426 | 544 | 10 | 1 | 1 | 544 | 1 | 540 | 0.0 | 1063 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012380 | Msa0400060 | -0.819920 | 9.013001e-53 | -8.615850e-47 |
| Msa0056910 | Msa0400060 | 0.802895 | 4.514286e-49 | -8.615850e-47 |
| Msa0199740 | Msa0400060 | -0.821291 | 4.366487e-53 | -8.615850e-47 |
| Msa0233200 | Msa0400060 | -0.817517 | 3.164725e-52 | -8.615850e-47 |
| Msa0373220 | Msa0400060 | -0.816331 | 5.841944e-52 | -8.615850e-47 |
| Msa0387970 | Msa0400060 | -0.822368 | 2.458715e-53 | -8.615850e-47 |
| Msa0392540 | Msa0400060 | -0.840190 | 1.009542e-57 | -8.615850e-47 |
| Msa0400060 | Msa0440310 | -0.826736 | 2.303119e-54 | -8.615850e-47 |
| Msa0400060 | Msa0443820 | 0.835400 | 1.715413e-56 | -8.615850e-47 |
| Msa0400060 | Msa0468020 | -0.815961 | 7.068017e-52 | -8.615850e-47 |
| Msa0400060 | Msa0471760 | -0.800196 | 1.614345e-48 | -8.615850e-47 |
| Msa0400060 | Msa0480430 | -0.806079 | 9.790998e-50 | -8.615850e-47 |
| Msa0400060 | Msa0494750 | 0.948720 | 5.385473e-107 | -8.615850e-47 |
| Msa0400060 | Msa0524960 | -0.815055 | 1.124573e-51 | -8.615850e-47 |
| Msa0400060 | Msa0548210 | -0.843260 | 1.562937e-58 | -8.615850e-47 |
| Msa0400060 | Msa0549540 | -0.804410 | 2.188942e-49 | -8.615850e-47 |
| Msa0400060 | Msa0556080 | -0.832601 | 8.615303e-56 | -8.615850e-47 |
| Msa0400060 | Msa0605250 | -0.804434 | 2.164159e-49 | -8.615850e-47 |
| Msa0400060 | Msa0629820 | -0.803009 | 4.276741e-49 | -8.615850e-47 |
| Msa0400060 | Msa0644630 | -0.845208 | 4.688357e-59 | -8.615850e-47 |
| Msa0400060 | Msa0651410 | -0.834520 | 2.858488e-56 | -8.615850e-47 |
| Msa0400060 | Msa0706450 | -0.824491 | 7.843493e-54 | -8.615850e-47 |
| Msa0400060 | Msa0832270 | -0.811313 | 7.451616e-51 | -8.615850e-47 |
| Msa0400060 | Msa0876270 | -0.806772 | 6.994617e-50 | -8.615850e-47 |
| Msa0400060 | Msa0944690 | -0.817562 | 3.092088e-52 | -8.615850e-47 |
| Msa0400060 | Msa1349810 | -0.802595 | 5.207036e-49 | -8.615850e-47 |
| Msa0400060 | Msa1404690 | -0.800931 | 1.143021e-48 | -8.615850e-47 |
| Msa0400060 | Msa1405380 | -0.807463 | 4.993105e-50 | -8.615850e-47 |
| Msa0400060 | Msa1406020 | -0.821953 | 3.069696e-53 | -8.615850e-47 |
| Msa0400060 | Msa1430450 | -0.811381 | 7.203915e-51 | -8.615850e-47 |
| Msa0400060 | Msa1462600 | -0.800211 | 1.602668e-48 | -8.615850e-47 |
| Msa0242290 | Msa0400060 | -0.801178 | 1.017995e-48 | -8.615850e-47 |
| Msa0306160 | Msa0400060 | -0.825611 | 4.266404e-54 | -8.615850e-47 |
| Msa0313800 | Msa0400060 | -0.806317 | 8.723705e-50 | -8.615850e-47 |
| Msa0319710 | Msa0400060 | -0.802486 | 5.483891e-49 | -8.615850e-47 |
| Msa0346790 | Msa0400060 | -0.801141 | 1.035678e-48 | -8.615850e-47 |
| Msa0353040 | Msa0400060 | 0.917026 | 8.760871e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0400060 | MtrunA17_Chr3g0088471 | 97.243 | 544 | 11 | 1 | 1 | 544 | 1 | 540 | 0.0 | 1061 |
| Msa0400060 | MtrunA17_Chr8g0352151 | 68.996 | 558 | 149 | 5 | 1 | 540 | 1 | 552 | 0.0 | 753 |
| Msa0400060 | MtrunA17_Chr2g0328761 | 58.935 | 526 | 178 | 3 | 17 | 539 | 16 | 506 | 0.0 | 595 |
| Msa0400060 | MtrunA17_Chr8g0352171 | 76.302 | 384 | 91 | 0 | 160 | 543 | 8 | 391 | 0.0 | 594 |
| Msa0400060 | MtrunA17_Chr5g0448591 | 38.189 | 508 | 247 | 5 | 32 | 539 | 109 | 549 | 1.48e-105 | 327 |
| Msa0400060 | MtrunA17_Chr7g0243421 | 45.185 | 270 | 136 | 4 | 272 | 535 | 4 | 267 | 1.79e-67 | 219 |
| Msa0400060 | MtrunA17_Chr8g0352161 | 56.250 | 96 | 39 | 1 | 67 | 162 | 3 | 95 | 2.06e-24 | 98.6 |
| Msa0400060 | MtrunA17_Chr7g0243411 | 62.821 | 78 | 29 | 0 | 30 | 107 | 110 | 187 | 4.92e-18 | 85.1 |
| Msa0400060 | MtrunA17_Chr7g0243411 | 42.529 | 87 | 50 | 0 | 184 | 270 | 204 | 290 | 1.68e-15 | 77.8 |
| Msa0400060 | MtrunA17_Chr4g0035751 | 25.916 | 382 | 247 | 16 | 164 | 528 | 151 | 513 | 8.79e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0400060 | AT3G08040.1 | 63.138 | 529 | 174 | 5 | 14 | 541 | 12 | 520 | 0.0 | 611 |
| Msa0400060 | AT1G51340.3 | 57.514 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 0.0 | 567 |
| Msa0400060 | AT1G51340.5 | 57.514 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 0.0 | 567 |
| Msa0400060 | AT1G51340.2 | 57.514 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 0.0 | 567 |
| Msa0400060 | AT1G51340.1 | 59.100 | 511 | 187 | 4 | 29 | 539 | 20 | 508 | 0.0 | 556 |
| Msa0400060 | AT3G08040.2 | 62.529 | 427 | 147 | 5 | 116 | 541 | 2 | 416 | 3.00e-179 | 511 |
| Msa0400060 | AT1G51340.4 | 55.904 | 415 | 157 | 5 | 1 | 415 | 2 | 390 | 5.74e-136 | 400 |
| Msa0400060 | AT4G38380.3 | 40.392 | 510 | 242 | 8 | 35 | 542 | 33 | 482 | 1.55e-113 | 346 |
| Msa0400060 | AT4G38380.2 | 40.392 | 510 | 242 | 8 | 35 | 542 | 105 | 554 | 7.62e-113 | 347 |
| Msa0400060 | AT4G38380.1 | 40.392 | 510 | 242 | 8 | 35 | 542 | 105 | 554 | 7.62e-113 | 347 |
| Msa0400060 | AT4G38380.4 | 40.755 | 503 | 236 | 8 | 42 | 542 | 2 | 444 | 8.44e-113 | 343 |
| Msa0400060 | AT2G38330.1 | 40.159 | 503 | 231 | 5 | 38 | 538 | 79 | 513 | 2.10e-109 | 337 |
| Msa0400060 | AT4G38380.5 | 45.000 | 360 | 192 | 3 | 185 | 542 | 189 | 544 | 2.26e-96 | 303 |
| Msa0400060 | AT4G38380.5 | 45.714 | 70 | 38 | 0 | 35 | 104 | 105 | 174 | 6.19e-12 | 68.6 |
Find 158 sgRNAs with CRISPR-Local
Find 505 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTGCCTCTTCTTCCTTAC+AGG | 0.216612 | 3_2:-23978575 | None:intergenic |
| GATACTCAGTGTTGTCAAAT+AGG | 0.247790 | 3_2:-23981645 | None:intergenic |
| TCATTAGCCTTTGTCTTTGA+TGG | 0.249674 | 3_2:+23980431 | Msa0400060:CDS |
| GAGTTGTTATCAAAAGATTT+AGG | 0.265569 | 3_2:+23976667 | Msa0400060:five_prime_UTR |
| GTCTTTGATGGTGTGAACTA+TGG | 0.289153 | 3_2:+23980443 | Msa0400060:CDS |
| TTTGCAGCTAAACCTCTATT+AGG | 0.292824 | 3_2:+23978665 | Msa0400060:CDS |
| GAGGTTTAGCTGCAAATATA+AGG | 0.308083 | 3_2:-23978658 | None:intergenic |
| TCCTGCAGTGCTTCTCTCCT+TGG | 0.308788 | 3_2:+23978873 | Msa0400060:CDS |
| AATACTGACCAAAGGGAAAA+TGG | 0.321677 | 3_2:-23978076 | None:intergenic |
| TGGAATGCAGCCATTGGAAT+TGG | 0.328091 | 3_2:-23979918 | None:intergenic |
| TAAGGGTTGCAGCTTGAATA+AGG | 0.333331 | 3_2:-23978640 | None:intergenic |
| TCCAAACCTGCCTCCAGGTT+TGG | 0.334784 | 3_2:+23979937 | Msa0400060:CDS |
| TCCAAACCTGGAGGCAGGTT+TGG | 0.341311 | 3_2:-23979938 | None:intergenic |
| TCAGGTTAGGCTCATTCTTA+AGG | 0.341953 | 3_2:+23976613 | Msa0400060:five_prime_UTR |
| TATGATTGCATTCAGTTTCC+GGG | 0.345943 | 3_2:+23979280 | Msa0400060:intron |
| AAGGTTTGATCTTGACTTGT+AGG | 0.349663 | 3_2:-23972949 | None:intergenic |
| ATTCTTTCTCTACAAGAGTA+AGG | 0.359214 | 3_2:+23980634 | Msa0400060:CDS |
| ATGAGTCTTCGCATGTTTGC+TGG | 0.360088 | 3_2:+23980692 | Msa0400060:CDS |
| ACAACACTAGGACGTATAAA+TGG | 0.362648 | 3_2:-23981468 | None:intergenic |
| ATACTCAGTGTTGTCAAATA+GGG | 0.365604 | 3_2:-23981644 | None:intergenic |
| TTTCAAGGTACCATCCTGTT+TGG | 0.366063 | 3_2:-23978244 | None:intergenic |
| GCCATGCAAGGAATCTTTAG+AGG | 0.376294 | 3_2:+23978895 | Msa0400060:CDS |
| CAGGTTAGGCTCATTCTTAA+GGG | 0.377608 | 3_2:+23976614 | Msa0400060:five_prime_UTR |
| ATTGACAACATGGACGATAC+TGG | 0.379609 | 3_2:-23981493 | None:intergenic |
| CTTGGTAGGTTGTTCAGGTT+AGG | 0.385269 | 3_2:+23976600 | Msa0400060:intron |
| TGGTTTAGCTGTTGCAATAC+AGG | 0.386667 | 3_2:+23979983 | Msa0400060:CDS |
| CTGTATTCAACCAAGCTTCA+AGG | 0.387444 | 3_2:+23978049 | Msa0400060:CDS |
| TGATATACAATCATTGAAGT+TGG | 0.391041 | 3_2:+23981785 | Msa0400060:three_prime_UTR |
| ATATACTTGGTAGGTTGTTC+AGG | 0.395469 | 3_2:+23976595 | Msa0400060:intron |
| TACAAAGTGTTGTTAAATAG+TGG | 0.396724 | 3_2:-23981546 | None:intergenic |
| CGCTTATTCTGCATACTCCT+TGG | 0.398929 | 3_2:+23980478 | Msa0400060:CDS |
| AACCTACCGATGACATATAA+AGG | 0.398982 | 3_2:-23978937 | None:intergenic |
| TGTAGCCGAAGAAGATACTA+TGG | 0.402836 | 3_2:+23978110 | Msa0400060:CDS |
| GTAGAAGAATCAGGTCTAAT+CGG | 0.404981 | 3_2:-23981594 | None:intergenic |
| TTCGCATGTTTGCTGGTGTA+TGG | 0.406622 | 3_2:+23980699 | Msa0400060:CDS |
| GGGAGAAAATTCTAAGAGTA+GGG | 0.412471 | 3_2:+23972889 | Msa0400060:five_prime_UTR |
| TCAAAAGATTTAGGATATCA+TGG | 0.413001 | 3_2:+23976676 | Msa0400060:exon |
| CTTATAGACACAGCATTCAT+AGG | 0.413657 | 3_2:+23977651 | Msa0400060:CDS |
| ACAAAGGCTAATGAATTGAT+TGG | 0.419858 | 3_2:-23980422 | None:intergenic |
| TGCTGCTAATGAGGCTGATA+AGG | 0.420820 | 3_2:-23979886 | None:intergenic |
| TGCAGGATGGGAACAGGAAC+AGG | 0.421872 | 3_2:+23981273 | Msa0400060:intron |
| TGCATTCCAAACCTGCCTCC+AGG | 0.432229 | 3_2:+23979932 | Msa0400060:CDS |
| CCGGGAGGCCTAGTCTGATT+AGG | 0.440861 | 3_2:-23980262 | None:intergenic |
| TAGGATATCATGGAAGATAA+TGG | 0.443090 | 3_2:+23976686 | Msa0400060:exon |
| AGGGAGAAAATTCTAAGAGT+AGG | 0.446030 | 3_2:+23972888 | Msa0400060:five_prime_UTR |
| ATCTGCAAATCCTTCATGCT+TGG | 0.446669 | 3_2:-23979536 | None:intergenic |
| ATGATATGCAGGATGGGAAC+AGG | 0.448434 | 3_2:+23981267 | Msa0400060:intron |
| AAACCCATTGCACCTAATAG+AGG | 0.448781 | 3_2:-23978677 | None:intergenic |
| AATCTTAAGTACTTAACAGC+TGG | 0.450245 | 3_2:-23978835 | None:intergenic |
| ATCAATAGGTGGTCTATTGT+TGG | 0.453559 | 3_2:+23979833 | Msa0400060:intron |
| CCGGTCGAACTTGCGGCGGC+AGG | 0.453774 | 3_2:+23978015 | Msa0400060:CDS |
| TCTTGAAGCAAATGATCATC+AGG | 0.455615 | 3_2:-23978204 | None:intergenic |
| TACTTAAGATTGAGAGCCTT+AGG | 0.458860 | 3_2:+23978847 | Msa0400060:CDS |
| GCAGTTCAATGAAAGCATTA+AGG | 0.461480 | 3_2:+23978161 | Msa0400060:CDS |
| AAACCTCTATTAGGTGCAAT+GGG | 0.462124 | 3_2:+23978674 | Msa0400060:CDS |
| ACATCCTCCCTTCTCGCTGA+TGG | 0.463184 | 3_2:+23979963 | Msa0400060:CDS |
| GTTGGAGGTGGATTATACTT+TGG | 0.465967 | 3_2:+23980203 | Msa0400060:CDS |
| AGAAGCAGGTGCAACCAAAC+AGG | 0.466060 | 3_2:+23978230 | Msa0400060:CDS |
| AGGTTTAGCTGCAAATATAA+GGG | 0.468515 | 3_2:-23978657 | None:intergenic |
| GCCAAGGAGAGAAGCACTGC+AGG | 0.469082 | 3_2:-23978874 | None:intergenic |
| CTCTCTCTAGTAGTTGGAGG+TGG | 0.470542 | 3_2:+23980191 | Msa0400060:CDS |
| CTGAGAGAGCACATGTGAAA+TGG | 0.475794 | 3_2:-23979370 | None:intergenic |
| TGCCATAGCGTAGAAGAATC+AGG | 0.477013 | 3_2:-23981603 | None:intergenic |
| CAGGTTTGGAATGCAGCCAT+TGG | 0.477643 | 3_2:-23979924 | None:intergenic |
| TCTATCCATAGTATCTTCTT+CGG | 0.480102 | 3_2:-23978115 | None:intergenic |
| GCAGCAACAGCAAGTGCAGA+TGG | 0.480634 | 3_2:-23977612 | None:intergenic |
| TAAACCTCTATTAGGTGCAA+TGG | 0.484001 | 3_2:+23978673 | Msa0400060:CDS |
| TCTAAGAGTAGGGGAAAGGT+TGG | 0.485105 | 3_2:+23972899 | Msa0400060:five_prime_UTR |
| GTGGCCTCTGAGAAAACGCC+AGG | 0.490069 | 3_2:-23981298 | None:intergenic |
| ATTATAGTCTTTCTCAGCAA+AGG | 0.493012 | 3_2:-23980111 | None:intergenic |
| GCCTCATTAGCAGCAAGGTT+AGG | 0.495494 | 3_2:+23979894 | Msa0400060:CDS |
| GTTGGACTCTCTCTAGTAGT+TGG | 0.497300 | 3_2:+23980185 | Msa0400060:CDS |
| AAGCACTGCAGGAGCACCTA+AGG | 0.498166 | 3_2:-23978863 | None:intergenic |
| TCCCTAGCTAAGGAGATACT+TGG | 0.498581 | 3_2:+23977579 | Msa0400060:CDS |
| GGCATACCTGAGTTCTCCTA+AGG | 0.499583 | 3_2:-23972968 | None:intergenic |
| TGCAAATCCTTCATGCTTGG+AGG | 0.500933 | 3_2:-23979533 | None:intergenic |
| ACAAGTCAAGATCAAACCTT+AGG | 0.503774 | 3_2:+23972952 | Msa0400060:five_prime_UTR |
| TAGAAGAATCAGGTCTAATC+GGG | 0.506914 | 3_2:-23981593 | None:intergenic |
| AAGATTATTCTTCAAGCTGT+CGG | 0.508803 | 3_2:+23981729 | Msa0400060:three_prime_UTR |
| GGACTCTCTCTAGTAGTTGG+AGG | 0.514348 | 3_2:+23980188 | Msa0400060:CDS |
| GACCTGATTCTTCTACGCTA+TGG | 0.515432 | 3_2:+23981601 | Msa0400060:three_prime_UTR |
| TGGGAACAGGAACAGGACCC+TGG | 0.518247 | 3_2:+23981280 | Msa0400060:CDS |
| GAATGTCACTGCTATAACTC+TGG | 0.518341 | 3_2:-23979856 | None:intergenic |
| AAATGGTAATCCTTGAAGCT+TGG | 0.519230 | 3_2:-23978059 | None:intergenic |
| TACTTCAAATTAGGCATCAG+AGG | 0.520511 | 3_2:+23979342 | Msa0400060:CDS |
| TCCCAAGTATCTCCTTAGCT+AGG | 0.521837 | 3_2:-23977581 | None:intergenic |
| CATGCGAAGACTCATATAGA+TGG | 0.522469 | 3_2:-23980684 | None:intergenic |
| AAACAGACAATTGATCCTAA+AGG | 0.524234 | 3_2:-23981396 | None:intergenic |
| TTCTTTCTCTACAAGAGTAA+GGG | 0.526412 | 3_2:+23980635 | Msa0400060:CDS |
| GGGAATCCATCTTGAATACA+AGG | 0.528068 | 3_2:-23977560 | None:intergenic |
| ACCTAACCTTGCTGCTAATG+AGG | 0.528818 | 3_2:-23979895 | None:intergenic |
| TGTCATCCAAACCTGGAGGC+AGG | 0.529510 | 3_2:-23979943 | None:intergenic |
| CTTCTCTCCTTGGCCATGCA+AGG | 0.533820 | 3_2:+23978883 | Msa0400060:CDS |
| CCCTAGCTAAGGAGATACTT+GGG | 0.534178 | 3_2:+23977580 | Msa0400060:CDS |
| AGCTAAACCATCAGCGAGAA+GGG | 0.535184 | 3_2:-23979970 | None:intergenic |
| ATGTAGCCTTGTATTCAAGA+TGG | 0.535860 | 3_2:+23977554 | Msa0400060:intron |
| AAAGATTCCTTGCATGGCCA+AGG | 0.537559 | 3_2:-23978890 | None:intergenic |
| CCTGCCGCCGCAAGTTCGAC+CGG | 0.538723 | 3_2:-23978015 | None:intergenic |
| TTGAAGTAAAATATGAGTAG+TGG | 0.539372 | 3_2:-23979327 | None:intergenic |
| CCCTCTAAAGATTCCTTGCA+TGG | 0.539576 | 3_2:-23978896 | None:intergenic |
| TCTTTGAAGAAAACTGATAG+AGG | 0.540796 | 3_2:-23976746 | None:intergenic |
| AGAGTGAGTCAAAACCTGTA+AGG | 0.540932 | 3_2:+23978561 | Msa0400060:CDS |
| TTGCTTCAAGACATAGAAGC+AGG | 0.542101 | 3_2:+23978216 | Msa0400060:CDS |
| CCTAATCAGACTAGGCCTCC+CGG | 0.542740 | 3_2:+23980262 | Msa0400060:CDS |
| AGGCATGACTTCATTCGACT+TGG | 0.543190 | 3_2:-23978184 | None:intergenic |
| ATCGTCCATGTTGTCAATTG+TGG | 0.546443 | 3_2:+23981498 | Msa0400060:three_prime_UTR |
| GGTGGATTATACTTTGGAGC+CGG | 0.547954 | 3_2:+23980209 | Msa0400060:CDS |
| CAAGATGGATTCCCTAGCTA+AGG | 0.548364 | 3_2:+23977569 | Msa0400060:CDS |
| GTGTCTATAAGAGAAGCAAT+TGG | 0.549405 | 3_2:-23977639 | None:intergenic |
| AAGTTGTAATACTGACCAAA+GGG | 0.554378 | 3_2:-23978083 | None:intergenic |
| GGGAGGATGTCATCCAAACC+TGG | 0.556732 | 3_2:-23979950 | None:intergenic |
| CCCAAGTATCTCCTTAGCTA+GGG | 0.561981 | 3_2:-23977580 | None:intergenic |
| CAGCTAAACCATCAGCGAGA+AGG | 0.563189 | 3_2:-23979971 | None:intergenic |
| TTAACAGCTGGGACGAGCAT+AGG | 0.563641 | 3_2:-23978823 | None:intergenic |
| ACAGCATTCATAGGTCACTT+AGG | 0.563791 | 3_2:+23977660 | Msa0400060:CDS |
| TTTAGGGCCGGTCGAACTTG+CGG | 0.564182 | 3_2:+23978008 | Msa0400060:intron |
| CCATGCAAGGAATCTTTAGA+GGG | 0.568460 | 3_2:+23978896 | Msa0400060:CDS |
| GGAAGAGAGTGAAGAATGCA+AGG | 0.568506 | 3_2:-23972928 | None:intergenic |
| GAAGTTGTAATACTGACCAA+AGG | 0.572451 | 3_2:-23978084 | None:intergenic |
| ATCTTAAGTACTTAACAGCT+GGG | 0.572536 | 3_2:-23978834 | None:intergenic |
| ATAATGCAGTCAAGAACAAG+TGG | 0.577108 | 3_2:+23976717 | Msa0400060:CDS |
| GTATGCATTGAATGTCGCTA+TGG | 0.582469 | 3_2:+23979302 | Msa0400060:CDS |
| ACAAATTGAAAGATAAGTGA+AGG | 0.583262 | 3_2:-23981846 | None:intergenic |
| CACATTAATGATACATCAAG+AGG | 0.584041 | 3_2:-23981690 | None:intergenic |
| CAAAACCTGTAAGGAAGAAG+AGG | 0.587911 | 3_2:+23978570 | Msa0400060:CDS |
| TCTCCTACCTCCAAGCATGA+AGG | 0.588618 | 3_2:+23979526 | Msa0400060:CDS |
| CAGCAACAGCAAGTGCAGAT+GGG | 0.589678 | 3_2:-23977611 | None:intergenic |
| CTCTACTATAGTGATAGTCT+CGG | 0.590577 | 3_2:+23981439 | Msa0400060:three_prime_UTR |
| AAATTCTAAGAGTAGGGGAA+AGG | 0.591858 | 3_2:+23972895 | Msa0400060:five_prime_UTR |
| ATAACAACTCAATCAAGAAG+AGG | 0.591987 | 3_2:-23976654 | None:intergenic |
| TCTTCTATTGTTACTAACAG+TGG | 0.598912 | 3_2:+23978533 | Msa0400060:CDS |
| AGCTTGGTTGAATACAGCAA+TGG | 0.599795 | 3_2:-23978043 | None:intergenic |
| ACAACTCCTTTATATGTCAT+CGG | 0.604310 | 3_2:+23978931 | Msa0400060:CDS |
| AATCCTTCATGCTTGGAGGT+AGG | 0.609737 | 3_2:-23979529 | None:intergenic |
| AGCGACATTCAATGCATACC+CGG | 0.610601 | 3_2:-23979298 | None:intergenic |
| ATCAAACCTTAGGAGAACTC+AGG | 0.612204 | 3_2:+23972962 | Msa0400060:five_prime_UTR |
| TTGCAGCTTGAATAAGGCCA+AGG | 0.612326 | 3_2:-23978634 | None:intergenic |
| AAGGTTAGGTCCAATTCCAA+TGG | 0.613997 | 3_2:+23979908 | Msa0400060:CDS |
| TACTCAGTGTTGTCAAATAG+GGG | 0.614519 | 3_2:-23981643 | None:intergenic |
| GGAGAAAATTCTAAGAGTAG+GGG | 0.621135 | 3_2:+23972890 | Msa0400060:five_prime_UTR |
| GCATTCCACAATTGACAACA+TGG | 0.624700 | 3_2:-23981503 | None:intergenic |
| TATATCCTCAAGACAATGTG+TGG | 0.625885 | 3_2:-23981317 | None:intergenic |
| TATCAGCCTCATTAGCAGCA+AGG | 0.628449 | 3_2:+23979889 | Msa0400060:CDS |
| ACGATACTGGATACAACACT+AGG | 0.633960 | 3_2:-23981480 | None:intergenic |
| AGGGCCGGTCGAACTTGCGG+CGG | 0.636828 | 3_2:+23978011 | Msa0400060:intron |
| AGAGGCCACACATTGTCTTG+AGG | 0.643794 | 3_2:+23981312 | Msa0400060:CDS |
| GTTATTCACCTAATCAGACT+AGG | 0.646571 | 3_2:+23980254 | Msa0400060:CDS |
| GTTCACACCATCAAAGACAA+AGG | 0.648235 | 3_2:-23980438 | None:intergenic |
| GCATGTTTGCTGGTGTATGG+AGG | 0.655745 | 3_2:+23980702 | Msa0400060:CDS |
| AAGTAACTACTGCTGCAACA+AGG | 0.664120 | 3_2:+23980135 | Msa0400060:CDS |
| GCAGGTGCAACCAAACAGGA+TGG | 0.671712 | 3_2:+23978234 | Msa0400060:CDS |
| GACTGTGCCGAAAAGTAATG+CGG | 0.674783 | 3_2:-23978612 | None:intergenic |
| ACATTAATGATACATCAAGA+GGG | 0.676174 | 3_2:-23981689 | None:intergenic |
| TAAACCATCAGCGAGAAGGG+AGG | 0.687372 | 3_2:-23979967 | None:intergenic |
| TGGCCTCTGAGAAAACGCCA+GGG | 0.688941 | 3_2:-23981297 | None:intergenic |
| TTGTACTAAATAGTGTATCG+CGG | 0.701950 | 3_2:+23981564 | Msa0400060:three_prime_UTR |
| ATGTTGTCAATTGTGGAATG+CGG | 0.717692 | 3_2:+23981505 | Msa0400060:three_prime_UTR |
| AGGATGTCATCCAAACCTGG+AGG | 0.737038 | 3_2:-23979947 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTAAGAAATATAAAATA+TGG | - | chr3_2:23973223-23973242 | None:intergenic | 10.0% |
| !!! | CATTTACTTTTTTTTTTTTA+AGG | + | chr3_2:23973463-23973482 | Msa0400060:intron | 10.0% |
| !!! | TTTTTTATAGATTTTCTTTT+TGG | - | chr3_2:23973929-23973948 | None:intergenic | 10.0% |
| !! | CCTTTAATTAATTAATTTAT+TGG | - | chr3_2:23975107-23975126 | None:intergenic | 10.0% |
| !! | CCAATAAATTAATTAATTAA+AGG | + | chr3_2:23975104-23975123 | Msa0400060:intron | 10.0% |
| !! | AAAAATATAGAGTTTATATT+AGG | + | chr3_2:23975928-23975947 | Msa0400060:intron | 10.0% |
| !!! | TATTTTGTTAAAAAATAGTT+AGG | + | chr3_2:23976253-23976272 | Msa0400060:intron | 10.0% |
| !!! | TTTTTTTTCTTATATAGAAA+TGG | + | chr3_2:23976495-23976514 | Msa0400060:intron | 10.0% |
| !!! | AATTAAAAAACTTAAGTTTT+TGG | - | chr3_2:23977412-23977431 | None:intergenic | 10.0% |
| !!! | AAACTTAAGTTTTTTAATTT+AGG | + | chr3_2:23977413-23977432 | Msa0400060:intron | 10.0% |
| !!! | AACTTAAGTTTTTTAATTTA+GGG | + | chr3_2:23977414-23977433 | Msa0400060:intron | 10.0% |
| !!! | TAAAATCAACAAATAATTTT+AGG | + | chr3_2:23977439-23977458 | Msa0400060:intron | 10.0% |
| !! | AGATAACAAAATATAAAAAA+CGG | - | chr3_2:23980540-23980559 | None:intergenic | 10.0% |
| !! | TGAAAAAATTCATATAGTAA+TGG | + | chr3_2:23973260-23973279 | Msa0400060:intron | 15.0% |
| !!! | GATTTGTTTTATACTTAAAT+TGG | + | chr3_2:23974706-23974725 | Msa0400060:intron | 15.0% |
| !!! | TTTTGTCTTATTTATTTTGA+TGG | + | chr3_2:23976553-23976572 | Msa0400060:intron | 15.0% |
| !!! | ACTAAAATGTTATTTAACTT+TGG | - | chr3_2:23976976-23976995 | None:intergenic | 15.0% |
| !! | CAATATCATATTCTATTAAA+GGG | - | chr3_2:23977906-23977925 | None:intergenic | 15.0% |
| !! | ACAATATCATATTCTATTAA+AGG | - | chr3_2:23977907-23977926 | None:intergenic | 15.0% |
| !!! | AGATATTTATCTTTTTTTGT+AGG | + | chr3_2:23978795-23978814 | Msa0400060:intron | 15.0% |
| !! | AATGTTTGAACATTATTATT+GGG | - | chr3_2:23979416-23979435 | None:intergenic | 15.0% |
| !! | AAATGTTTGAACATTATTAT+TGG | - | chr3_2:23979417-23979436 | None:intergenic | 15.0% |
| !! | GTTTATATTAATGAAAAAAG+TGG | + | chr3_2:23979502-23979521 | Msa0400060:CDS | 15.0% |
| !! | TAAATTCTAGCATTATTAAT+AGG | - | chr3_2:23979784-23979803 | None:intergenic | 15.0% |
| !! | ACATATCTAATGAAATGAAT+TGG | - | chr3_2:23972992-23973011 | None:intergenic | 20.0% |
| !! | AAGATTATATAGATTTGATC+TGG | + | chr3_2:23973025-23973044 | Msa0400060:intron | 20.0% |
| !!! | AGAAATCTAAGTTGATTAAA+AGG | - | chr3_2:23973384-23973403 | None:intergenic | 20.0% |
| !! | AATAAATAATGTGATGAAGT+TGG | - | chr3_2:23973570-23973589 | None:intergenic | 20.0% |
| !!! | TTTATTTTTGGTAGATTTGT+GGG | - | chr3_2:23973604-23973623 | None:intergenic | 20.0% |
| !!! | TTTTATTTTTGGTAGATTTG+TGG | - | chr3_2:23973605-23973624 | None:intergenic | 20.0% |
| !! | ACTATTAATATCTGTCAAAA+TGG | + | chr3_2:23973694-23973713 | Msa0400060:intron | 20.0% |
| !! | ATTACATGCTTAGAATTAAA+TGG | + | chr3_2:23973881-23973900 | Msa0400060:intron | 20.0% |
| !!! | TTATAGATTTTCTTTTTGGT+GGG | - | chr3_2:23973925-23973944 | None:intergenic | 20.0% |
| !!! | TTTATAGATTTTCTTTTTGG+TGG | - | chr3_2:23973926-23973945 | None:intergenic | 20.0% |
| !! | ACTTTAATGAATAATAGTGT+AGG | + | chr3_2:23973992-23974011 | Msa0400060:intron | 20.0% |
| !!! | TCTGTTTTTCTAACTTATTA+CGG | + | chr3_2:23974738-23974757 | Msa0400060:intron | 20.0% |
| !!! | CAAGGTATTTATACTATATT+TGG | - | chr3_2:23975170-23975189 | None:intergenic | 20.0% |
| !! | CAAATATAGTATAAATACCT+TGG | + | chr3_2:23975168-23975187 | Msa0400060:intron | 20.0% |
| !! | TCACTTTATCATTAGTAAAA+AGG | + | chr3_2:23975335-23975354 | Msa0400060:intron | 20.0% |
| !!! | AAGATATTGACTATTGTTAA+AGG | - | chr3_2:23975425-23975444 | None:intergenic | 20.0% |
| !!! | GACATTTGGTTTTATTTTTT+TGG | - | chr3_2:23975692-23975711 | None:intergenic | 20.0% |
| !!! | AATGTTTTTGAAGGTTTTTA+TGG | + | chr3_2:23976019-23976038 | Msa0400060:intron | 20.0% |
| !!! | ATGTTTTTGAAGGTTTTTAT+GGG | + | chr3_2:23976020-23976039 | Msa0400060:intron | 20.0% |
| !! | TTCGGATTATATAATTCAAA+CGG | - | chr3_2:23976055-23976074 | None:intergenic | 20.0% |
| !! | TTTATATTATGTTACTGTCA+AGG | + | chr3_2:23976121-23976140 | Msa0400060:intron | 20.0% |
| !! | TTATATTATGTTACTGTCAA+GGG | + | chr3_2:23976122-23976141 | Msa0400060:intron | 20.0% |
| !!! | TTTATCATTTTCCATCTTAT+AGG | + | chr3_2:23976222-23976241 | Msa0400060:intron | 20.0% |
| !!! | TTATCATTTTCCATCTTATA+GGG | + | chr3_2:23976223-23976242 | Msa0400060:intron | 20.0% |
| !!! | TATTTTGATGGTACAAAATA+TGG | + | chr3_2:23976565-23976584 | Msa0400060:intron | 20.0% |
| !! | CAGAATATATGTGTATTATA+GGG | - | chr3_2:23976999-23977018 | None:intergenic | 20.0% |
| !! | AAAACCATAAAAGAATTCAT+AGG | - | chr3_2:23977030-23977049 | None:intergenic | 20.0% |
| !!! | TTTTTTATACCTAGAATAGA+AGG | + | chr3_2:23977046-23977065 | Msa0400060:intron | 20.0% |
| !! | TGTGTTTAATAAAAATATGG+TGG | - | chr3_2:23977085-23977104 | None:intergenic | 20.0% |
| !! | GTGTGTGTTTAATAAAAATA+TGG | - | chr3_2:23977088-23977107 | None:intergenic | 20.0% |
| !! | AAAAAACGCTATATTATTGT+TGG | + | chr3_2:23977472-23977491 | Msa0400060:intron | 20.0% |
| !! | AAAAACGCTATATTATTGTT+GGG | + | chr3_2:23977473-23977492 | Msa0400060:intron | 20.0% |
| !!! | TTTTACAGAATACTAATAGT+AGG | + | chr3_2:23977517-23977536 | Msa0400060:intron | 20.0% |
| !!! | TTTGTTTTTTTCATGTGTTT+AGG | + | chr3_2:23977991-23978010 | Msa0400060:intron | 20.0% |
| !!! | TTGTTTTTTTCATGTGTTTA+GGG | + | chr3_2:23977992-23978011 | Msa0400060:intron | 20.0% |
| !! | ACAAATGCATAAATTAGAAT+CGG | + | chr3_2:23979013-23979032 | Msa0400060:intron | 20.0% |
| !!! | CTCATATTTTACTTCAAATT+AGG | + | chr3_2:23979333-23979352 | Msa0400060:CDS | 20.0% |
| !!! | TACAAAATGATGATACTTTT+AGG | + | chr3_2:23979456-23979475 | Msa0400060:intron | 20.0% |
| !!! | ATTTTCAGGTTTCTTAAAAA+TGG | + | chr3_2:23979557-23979576 | Msa0400060:CDS | 20.0% |
| !!! | TAATATTTTTTTCTGAGTCT+CGG | - | chr3_2:23979734-23979753 | None:intergenic | 20.0% |
| !! | TTGTTTCAATTTCAATCAAT+AGG | + | chr3_2:23979819-23979838 | Msa0400060:intron | 20.0% |
| !! | TTAATATATATCTTGCATCT+CGG | - | chr3_2:23980033-23980052 | None:intergenic | 20.0% |
| !! | TCAACATTTATTTAGTGATT+TGG | + | chr3_2:23980563-23980582 | Msa0400060:intron | 20.0% |
| !! | AAACATGTATAAGATGTTTA+TGG | + | chr3_2:23981182-23981201 | Msa0400060:intron | 20.0% |
| ! | TTTATTGTTATGTTAGTCGT+TGG | - | chr3_2:23973083-23973102 | None:intergenic | 25.0% |
| ! | AAAATACACATCTTTGTCTT+TGG | - | chr3_2:23973835-23973854 | None:intergenic | 25.0% |
| ! | TCTAAGCATGTAATTAATCA+TGG | - | chr3_2:23973875-23973894 | None:intergenic | 25.0% |
| ! | GTTACAAAATGACTCATTAT+GGG | - | chr3_2:23974159-23974178 | None:intergenic | 25.0% |
| ! | TGTTACAAAATGACTCATTA+TGG | - | chr3_2:23974160-23974179 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTCTATATGT+CGG | + | chr3_2:23974456-23974475 | Msa0400060:intron | 25.0% |
| !!! | TTTTCAATTTTTTCCCAGAA+AGG | + | chr3_2:23974762-23974781 | Msa0400060:intron | 25.0% |
| ! | GTAAAAGAAAAGAACTAAAG+TGG | - | chr3_2:23974800-23974819 | None:intergenic | 25.0% |
| !!! | GATTGTATTTTAAACCACTA+CGG | - | chr3_2:23974833-23974852 | None:intergenic | 25.0% |
| ! | AATGTATATGCATGTACTAT+TGG | + | chr3_2:23974912-23974931 | Msa0400060:intron | 25.0% |
| ! | ACTAGTTAAGGAAACAAAAA+AGG | - | chr3_2:23975256-23975275 | None:intergenic | 25.0% |
| ! | TACAAACTCTCTCAATATAT+AGG | - | chr3_2:23975502-23975521 | None:intergenic | 25.0% |
| !!! | TCCTAAAATTGTTATTTGAG+AGG | + | chr3_2:23975559-23975578 | Msa0400060:intron | 25.0% |
| !! | ACCTCTCAAATAACAATTTT+AGG | - | chr3_2:23975563-23975582 | None:intergenic | 25.0% |
| !!! | AAAATTGTTATTTGAGAGGT+AGG | + | chr3_2:23975563-23975582 | Msa0400060:intron | 25.0% |
| ! | TTCTTATATTGTGAGACATT+TGG | - | chr3_2:23975706-23975725 | None:intergenic | 25.0% |
| ! | ATGCATGTTAAAACTACAAA+TGG | + | chr3_2:23975811-23975830 | Msa0400060:intron | 25.0% |
| ! | TGCATGTTAAAACTACAAAT+GGG | + | chr3_2:23975812-23975831 | Msa0400060:intron | 25.0% |
| ! | TTAAGAAAAAGCCAAATGTT+CGG | - | chr3_2:23975871-23975890 | None:intergenic | 25.0% |
| ! | AGTTTAAATGAGTTGTAGTT+CGG | - | chr3_2:23975895-23975914 | None:intergenic | 25.0% |
| !!! | AGTGTTTCAAATGTTTTTGA+AGG | + | chr3_2:23976010-23976029 | Msa0400060:intron | 25.0% |
| ! | TTATATAATCCGAACTACAT+AGG | + | chr3_2:23976061-23976080 | Msa0400060:intron | 25.0% |
| ! | TATATTATGTTACTGTCAAG+GGG | + | chr3_2:23976123-23976142 | Msa0400060:intron | 25.0% |
| !! | TATCATTTTCCATCTTATAG+GGG | + | chr3_2:23976224-23976243 | Msa0400060:intron | 25.0% |
| ! | ATATGGAACTAACATATACT+TGG | + | chr3_2:23976582-23976601 | Msa0400060:intron | 25.0% |
| ! | GAGTTGTTATCAAAAGATTT+AGG | + | chr3_2:23976667-23976686 | Msa0400060:five_prime_UTR | 25.0% |
| !! | TCAAAAGATTTAGGATATCA+TGG | + | chr3_2:23976676-23976695 | Msa0400060:exon | 25.0% |
| !!! | TAAGTTGATTACACAAATTG+AGG | - | chr3_2:23976782-23976801 | None:intergenic | 25.0% |
| ! | CCAGAATATATGTGTATTAT+AGG | - | chr3_2:23977000-23977019 | None:intergenic | 25.0% |
| ! | CCTATAATACACATATATTC+TGG | + | chr3_2:23976997-23977016 | Msa0400060:intron | 25.0% |
| !! | TAGTCCTATGAATTCTTTTA+TGG | + | chr3_2:23977023-23977042 | Msa0400060:intron | 25.0% |
| !!! | TTTTGTCCAAAAGTATACTT+TGG | + | chr3_2:23977163-23977182 | Msa0400060:intron | 25.0% |
| ! | GACATAAATCTAATATTGCA+CGG | - | chr3_2:23977301-23977320 | None:intergenic | 25.0% |
| ! | GAGACTGAAGTTAATTAATA+TGG | - | chr3_2:23977348-23977367 | None:intergenic | 25.0% |
| !!! | ACTAGATTTTGATATTGTGA+AGG | + | chr3_2:23977705-23977724 | Msa0400060:intron | 25.0% |
| !!! | CTAGATTTTGATATTGTGAA+GGG | + | chr3_2:23977706-23977725 | Msa0400060:intron | 25.0% |
| !!! | ATTTTTCGTCTCATTTTTCA+AGG | - | chr3_2:23978262-23978281 | None:intergenic | 25.0% |
| ! | TTGAAAAATGAGACGAAAAA+TGG | + | chr3_2:23978261-23978280 | Msa0400060:CDS | 25.0% |
| ! | ATTTGAATTTGCATCTGATA+AGG | - | chr3_2:23978504-23978523 | None:intergenic | 25.0% |
| !! | CCACTTATAAATACATTTTC+AGG | - | chr3_2:23979073-23979092 | None:intergenic | 25.0% |
| ! | CCTGAAAATGTATTTATAAG+TGG | + | chr3_2:23979070-23979089 | Msa0400060:intron | 25.0% |
| ! | GAAAATGTATTTATAAGTGG+TGG | + | chr3_2:23979073-23979092 | Msa0400060:intron | 25.0% |
| ! | AAAGTTAATGAGAGAAGATT+TGG | + | chr3_2:23979212-23979231 | Msa0400060:intron | 25.0% |
| ! | GCAAAAAAATGAACAAGTTA+GGG | - | chr3_2:23979260-23979279 | None:intergenic | 25.0% |
| ! | AGCAAAAAAATGAACAAGTT+AGG | - | chr3_2:23979261-23979280 | None:intergenic | 25.0% |
| ! | TTGAAGTAAAATATGAGTAG+TGG | - | chr3_2:23979330-23979349 | None:intergenic | 25.0% |
| !!! | TGATACTTTTAGGTACATTA+TGG | + | chr3_2:23979466-23979485 | Msa0400060:intron | 25.0% |
| ! | GTTTCTTAAAAATGGTATGT+TGG | + | chr3_2:23979565-23979584 | Msa0400060:intron | 25.0% |
| !!! | AATATTTTTTTCTGAGTCTC+GGG | - | chr3_2:23979733-23979752 | None:intergenic | 25.0% |
| ! | TTTCAATTTCAATCAATAGG+TGG | + | chr3_2:23979822-23979841 | Msa0400060:intron | 25.0% |
| !!! | AACATTTTTGGAAAATACTC+CGG | - | chr3_2:23980231-23980250 | None:intergenic | 25.0% |
| !!! | ATTTGGTATTCTGTTTTTTC+AGG | + | chr3_2:23980580-23980599 | Msa0400060:intron | 25.0% |
| ! | AGTTACTTGCTTTCAATATA+AGG | - | chr3_2:23980736-23980755 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAAACTATCA+TGG | - | chr3_2:23980820-23980839 | None:intergenic | 25.0% |
| !!! | TCAAGTTTTTTAACCTAACA+TGG | + | chr3_2:23980946-23980965 | Msa0400060:intron | 25.0% |
| !! | TTCGTTGTTCAATTTTCATA+TGG | - | chr3_2:23981149-23981168 | None:intergenic | 25.0% |
| !!! | TACAAAGTGTTGTTAAATAG+TGG | - | chr3_2:23981549-23981568 | None:intergenic | 25.0% |
| ! | ACATTAATGATACATCAAGA+GGG | - | chr3_2:23981692-23981711 | None:intergenic | 25.0% |
| ! | TGATATACAATCATTGAAGT+TGG | + | chr3_2:23981785-23981804 | Msa0400060:three_prime_UTR | 25.0% |
| ! | ACAAATTGAAAGATAAGTGA+AGG | - | chr3_2:23981849-23981868 | None:intergenic | 25.0% |
| ! | TAGAATTTTCTCCCTCAAAA+AGG | - | chr3_2:23972883-23972902 | None:intergenic | 30.0% |
| GTTTATTGTTACTCGAAAGT+CGG | + | chr3_2:23973049-23973068 | Msa0400060:intron | 30.0% | |
| CTTTCTCAAATGAAAAATGC+AGG | - | chr3_2:23973434-23973453 | None:intergenic | 30.0% | |
| !! | TTTCATAGTGTGTTTTTGTC+AGG | - | chr3_2:23973669-23973688 | None:intergenic | 30.0% |
| GACAATGCATAAAATATGCA+AGG | + | chr3_2:23973784-23973803 | Msa0400060:intron | 30.0% | |
| GTAATTAATCATGGATGATG+AGG | - | chr3_2:23973866-23973885 | None:intergenic | 30.0% | |
| GACTCATTATGGGTATTAAA+TGG | - | chr3_2:23974149-23974168 | None:intergenic | 30.0% | |
| TTAACAAGAAGTAAAGTACG+TGG | - | chr3_2:23974301-23974320 | None:intergenic | 30.0% | |
| ! | ATTTAACTGTATCGACGTAT+CGG | - | chr3_2:23974417-23974436 | None:intergenic | 30.0% |
| ATTGTCGTATAATTGTTGAC+AGG | - | chr3_2:23974640-23974659 | None:intergenic | 30.0% | |
| ! | AACTAAAGTGGAACATGTTT+TGG | - | chr3_2:23974788-23974807 | None:intergenic | 30.0% |
| ! | TTTTGACAAAATTGCACACT+TGG | + | chr3_2:23975072-23975091 | Msa0400060:intron | 30.0% |
| ! | TACATCAAGAGAAGATTTTG+TGG | - | chr3_2:23975394-23975413 | None:intergenic | 30.0% |
| ! | CGAACTGATATTCTTTTTCT+GGG | - | chr3_2:23975537-23975556 | None:intergenic | 30.0% |
| ! | TCGAACTGATATTCTTTTTC+TGG | - | chr3_2:23975538-23975557 | None:intergenic | 30.0% |
| AACAATGCATACAATATGCA+AGG | + | chr3_2:23975623-23975642 | Msa0400060:intron | 30.0% | |
| AAAACTACAAATGGGATGTA+AGG | + | chr3_2:23975820-23975839 | Msa0400060:intron | 30.0% | |
| ATATTATGTTACTGTCAAGG+GGG | + | chr3_2:23976124-23976143 | Msa0400060:intron | 30.0% | |
| ATAAGAAAACCCCTATAAGA+TGG | - | chr3_2:23976236-23976255 | None:intergenic | 30.0% | |
| ! | CCTTCTTTTCATGTATTTGT+AGG | - | chr3_2:23976303-23976322 | None:intergenic | 30.0% |
| CCTACAAATACATGAAAAGA+AGG | + | chr3_2:23976300-23976319 | Msa0400060:intron | 30.0% | |
| ATAACAACTCAATCAAGAAG+AGG | - | chr3_2:23976657-23976676 | None:intergenic | 30.0% | |
| TAGGATATCATGGAAGATAA+TGG | + | chr3_2:23976686-23976705 | Msa0400060:exon | 30.0% | |
| ! | TCTTTGAAGAAAACTGATAG+AGG | - | chr3_2:23976749-23976768 | None:intergenic | 30.0% |
| !! | ATCAGATTCTCTAAAGCTTA+AGG | + | chr3_2:23976933-23976952 | Msa0400060:intron | 30.0% |
| !! | TCAGATTCTCTAAAGCTTAA+GGG | + | chr3_2:23976934-23976953 | Msa0400060:intron | 30.0% |
| AAAAGACTACCTTCTATTCT+AGG | - | chr3_2:23977058-23977077 | None:intergenic | 30.0% | |
| ! | TACACTCCAAAGTATACTTT+TGG | - | chr3_2:23977172-23977191 | None:intergenic | 30.0% |
| AATATGGTTCACATATTGCA+AGG | - | chr3_2:23977332-23977351 | None:intergenic | 30.0% | |
| ATTGTTGTCATGTGACTAAA+AGG | + | chr3_2:23977751-23977770 | Msa0400060:intron | 30.0% | |
| AAGTTGTAATACTGACCAAA+GGG | - | chr3_2:23978086-23978105 | None:intergenic | 30.0% | |
| TCTATCCATAGTATCTTCTT+CGG | - | chr3_2:23978118-23978137 | None:intergenic | 30.0% | |
| ATAGCTCATATCATCAAACA+TGG | - | chr3_2:23978317-23978336 | None:intergenic | 30.0% | |
| TTGAATATAACCATCTGTGT+CGG | + | chr3_2:23978383-23978402 | Msa0400060:intron | 30.0% | |
| TCTTCTATTGTTACTAACAG+TGG | + | chr3_2:23978533-23978552 | Msa0400060:CDS | 30.0% | |
| AGGTTTAGCTGCAAATATAA+GGG | - | chr3_2:23978660-23978679 | None:intergenic | 30.0% | |
| ATCTTAAGTACTTAACAGCT+GGG | - | chr3_2:23978837-23978856 | None:intergenic | 30.0% | |
| AATCTTAAGTACTTAACAGC+TGG | - | chr3_2:23978838-23978857 | None:intergenic | 30.0% | |
| ACAACTCCTTTATATGTCAT+CGG | + | chr3_2:23978931-23978950 | Msa0400060:CDS | 30.0% | |
| !! | ACTGTCCGATTTTAATCATA+CGG | + | chr3_2:23979658-23979677 | Msa0400060:intron | 30.0% |
| CTAGACCGTATGATTAAAAT+CGG | - | chr3_2:23979666-23979685 | None:intergenic | 30.0% | |
| ! | TTTTAATCATACGGTCTAGA+TGG | + | chr3_2:23979667-23979686 | Msa0400060:intron | 30.0% |
| TTTAATCATACGGTCTAGAT+GGG | + | chr3_2:23979668-23979687 | Msa0400060:intron | 30.0% | |
| ATTAAGTTTGCCTTTATCAC+AGG | + | chr3_2:23980073-23980092 | Msa0400060:intron | 30.0% | |
| ATTATAGTCTTTCTCAGCAA+AGG | - | chr3_2:23980114-23980133 | None:intergenic | 30.0% | |
| !!! | CTGCAAATGAGTTTTGTTTT+AGG | + | chr3_2:23980161-23980180 | Msa0400060:CDS | 30.0% |
| !!! | ATGAGTTTTGTTTTAGGAGT+TGG | + | chr3_2:23980167-23980186 | Msa0400060:CDS | 30.0% |
| ! | GTGAATAACAGCAACATTTT+TGG | - | chr3_2:23980243-23980262 | None:intergenic | 30.0% |
| ACAAAGGCTAATGAATTGAT+TGG | - | chr3_2:23980425-23980444 | None:intergenic | 30.0% | |
| AAAAGAATGCAAACTTACCA+AGG | - | chr3_2:23980498-23980517 | None:intergenic | 30.0% | |
| !!! | TATTCTGTTTTTTCAGGTCT+TGG | + | chr3_2:23980586-23980605 | Msa0400060:intron | 30.0% |
| ATTCTTTCTCTACAAGAGTA+AGG | + | chr3_2:23980634-23980653 | Msa0400060:CDS | 30.0% | |
| TTCTTTCTCTACAAGAGTAA+GGG | + | chr3_2:23980635-23980654 | Msa0400060:CDS | 30.0% | |
| !! | TACAAGAGTAAGGGTTTTAT+TGG | + | chr3_2:23980644-23980663 | Msa0400060:CDS | 30.0% |
| TAAACTATCATGGAGAGTTT+AGG | - | chr3_2:23980810-23980829 | None:intergenic | 30.0% | |
| ! | TAGTGTAGTTTTTGCATCTA+AGG | + | chr3_2:23981005-23981024 | Msa0400060:intron | 30.0% |
| ! | CTAAGGTAGGTGTATATTTT+TGG | + | chr3_2:23981022-23981041 | Msa0400060:intron | 30.0% |
| ATATGAATGATTGATCATCG+TGG | + | chr3_2:23981052-23981071 | Msa0400060:intron | 30.0% | |
| AAACATGTCAAATGATATGC+AGG | + | chr3_2:23981256-23981275 | Msa0400060:intron | 30.0% | |
| !! | TACATCACTTTTCATCCTTT+AGG | + | chr3_2:23981381-23981400 | Msa0400060:three_prime_UTR | 30.0% |
| AAACAGACAATTGATCCTAA+AGG | - | chr3_2:23981399-23981418 | None:intergenic | 30.0% | |
| !!! | GGATCAATTGTCTGTTTTTT+AGG | + | chr3_2:23981402-23981421 | Msa0400060:three_prime_UTR | 30.0% |
| TTGTACTAAATAGTGTATCG+CGG | + | chr3_2:23981564-23981583 | Msa0400060:three_prime_UTR | 30.0% | |
| ATACTCAGTGTTGTCAAATA+GGG | - | chr3_2:23981647-23981666 | None:intergenic | 30.0% | |
| CACATTAATGATACATCAAG+AGG | - | chr3_2:23981693-23981712 | None:intergenic | 30.0% | |
| AAGATTATTCTTCAAGCTGT+CGG | + | chr3_2:23981729-23981748 | Msa0400060:three_prime_UTR | 30.0% | |
| ! | AGGGAGAAAATTCTAAGAGT+AGG | + | chr3_2:23972888-23972907 | Msa0400060:five_prime_UTR | 35.0% |
| ! | GGGAGAAAATTCTAAGAGTA+GGG | + | chr3_2:23972889-23972908 | Msa0400060:five_prime_UTR | 35.0% |
| ! | GGAGAAAATTCTAAGAGTAG+GGG | + | chr3_2:23972890-23972909 | Msa0400060:five_prime_UTR | 35.0% |
| ! | AAATTCTAAGAGTAGGGGAA+AGG | + | chr3_2:23972895-23972914 | Msa0400060:five_prime_UTR | 35.0% |
| !! | AAGGTTTGATCTTGACTTGT+AGG | - | chr3_2:23972952-23972971 | None:intergenic | 35.0% |
| ACAAGTCAAGATCAAACCTT+AGG | + | chr3_2:23972952-23972971 | Msa0400060:five_prime_UTR | 35.0% | |
| TAGCATAAAGCAATGCCAAT+TGG | - | chr3_2:23973351-23973370 | None:intergenic | 35.0% | |
| !!! | TTGTCAGGCTTTTGGTTTAT+GGG | - | chr3_2:23973654-23973673 | None:intergenic | 35.0% |
| !!! | TTTGTCAGGCTTTTGGTTTA+TGG | - | chr3_2:23973655-23973674 | None:intergenic | 35.0% |
| ATATCTGTCAAAATGGTGAG+CGG | + | chr3_2:23973701-23973720 | Msa0400060:intron | 35.0% | |
| TGCATAAAATATGCAAGGTC+TGG | + | chr3_2:23973789-23973808 | Msa0400060:intron | 35.0% | |
| GCATAAAATATGCAAGGTCT+GGG | + | chr3_2:23973790-23973809 | Msa0400060:intron | 35.0% | |
| CATAAAATATGCAAGGTCTG+GGG | + | chr3_2:23973791-23973810 | Msa0400060:intron | 35.0% | |
| ATACACATCTTTGTCTTTGG+TGG | - | chr3_2:23973832-23973851 | None:intergenic | 35.0% | |
| TGCAGTAAGCATAAGAGATA+AGG | - | chr3_2:23974102-23974121 | None:intergenic | 35.0% | |
| CTTGTCACTAATAAAGTACG+TGG | - | chr3_2:23974245-23974264 | None:intergenic | 35.0% | |
| TACTTGTGTACTATGAAGCA+AGG | + | chr3_2:23974371-23974390 | Msa0400060:intron | 35.0% | |
| TGTACTATGAAGCAAGGATA+CGG | + | chr3_2:23974377-23974396 | Msa0400060:intron | 35.0% | |
| GTAATTCTATATGTCGGTGT+CGG | + | chr3_2:23974462-23974481 | Msa0400060:intron | 35.0% | |
| ! | TCATAGCTTCTGTAGGATTT+TGG | + | chr3_2:23974538-23974557 | Msa0400060:intron | 35.0% |
| TAATCCGTACAAGGTGAATA+TGG | - | chr3_2:23974607-23974626 | None:intergenic | 35.0% | |
| ! | TTTTAAACCACTACGGAATG+AGG | - | chr3_2:23974826-23974845 | None:intergenic | 35.0% |
| ATTTGAGAGGTAGGTCAAAA+AGG | + | chr3_2:23975572-23975591 | Msa0400060:intron | 35.0% | |
| !!! | TTTGGCCTACCTCTTTTTTT+TGG | - | chr3_2:23975674-23975693 | None:intergenic | 35.0% |
| ATGTTTGTAAGCCGAACATT+TGG | + | chr3_2:23975857-23975876 | Msa0400060:intron | 35.0% | |
| GGAACTAACATATACTTGGT+AGG | + | chr3_2:23976586-23976605 | Msa0400060:intron | 35.0% | |
| ATATACTTGGTAGGTTGTTC+AGG | + | chr3_2:23976595-23976614 | Msa0400060:intron | 35.0% | |
| ATAATGCAGTCAAGAACAAG+TGG | + | chr3_2:23976717-23976736 | Msa0400060:CDS | 35.0% | |
| ! | CAGTTTTCTTCAAAGATGCA+AGG | + | chr3_2:23976753-23976772 | Msa0400060:CDS | 35.0% |
| ACTTATTCACCCTTCTTTCT+TGG | + | chr3_2:23976797-23976816 | Msa0400060:intron | 35.0% | |
| ATATAGTTTCGACGTGATGA+AGG | + | chr3_2:23977220-23977239 | Msa0400060:intron | 35.0% | |
| !! | ATGTAGCCTTGTATTCAAGA+TGG | + | chr3_2:23977554-23977573 | Msa0400060:intron | 35.0% |
| GTGTCTATAAGAGAAGCAAT+TGG | - | chr3_2:23977642-23977661 | None:intergenic | 35.0% | |
| CTTATAGACACAGCATTCAT+AGG | + | chr3_2:23977651-23977670 | Msa0400060:CDS | 35.0% | |
| AGCCTCTTGTGTTAAAAACA+GGG | + | chr3_2:23977803-23977822 | Msa0400060:intron | 35.0% | |
| !!! | TACCCTGTTTTTAACACAAG+AGG | - | chr3_2:23977808-23977827 | None:intergenic | 35.0% |
| CTTGTGTTAAAAACAGGGTA+AGG | + | chr3_2:23977808-23977827 | Msa0400060:intron | 35.0% | |
| !!! | TTTTTTCATGTGTTTAGGGC+CGG | + | chr3_2:23977996-23978015 | Msa0400060:intron | 35.0% |
| AAATGGTAATCCTTGAAGCT+TGG | - | chr3_2:23978062-23978081 | None:intergenic | 35.0% | |
| ! | AAGGATTACCATTTTCCCTT+TGG | + | chr3_2:23978068-23978087 | Msa0400060:CDS | 35.0% |
| AATACTGACCAAAGGGAAAA+TGG | - | chr3_2:23978079-23978098 | None:intergenic | 35.0% | |
| GAAGTTGTAATACTGACCAA+AGG | - | chr3_2:23978087-23978106 | None:intergenic | 35.0% | |
| !! | GCAGTTCAATGAAAGCATTA+AGG | + | chr3_2:23978161-23978180 | Msa0400060:CDS | 35.0% |
| TCTTGAAGCAAATGATCATC+AGG | - | chr3_2:23978207-23978226 | None:intergenic | 35.0% | |
| AATGAGACGAAAAATGGAGA+TGG | + | chr3_2:23978267-23978286 | Msa0400060:CDS | 35.0% | |
| ATTAGTATCAGTGTCTGTGT+CGG | - | chr3_2:23978346-23978365 | None:intergenic | 35.0% | |
| GAGGTTTAGCTGCAAATATA+AGG | - | chr3_2:23978661-23978680 | None:intergenic | 35.0% | |
| TTTGCAGCTAAACCTCTATT+AGG | + | chr3_2:23978665-23978684 | Msa0400060:CDS | 35.0% | |
| TAAACCTCTATTAGGTGCAA+TGG | + | chr3_2:23978673-23978692 | Msa0400060:CDS | 35.0% | |
| AAACCTCTATTAGGTGCAAT+GGG | + | chr3_2:23978674-23978693 | Msa0400060:CDS | 35.0% | |
| TACTTAAGATTGAGAGCCTT+AGG | + | chr3_2:23978847-23978866 | Msa0400060:CDS | 35.0% | |
| AACCTACCGATGACATATAA+AGG | - | chr3_2:23978940-23978959 | None:intergenic | 35.0% | |
| TGTTCTCAGAGTCTCTAATT+TGG | - | chr3_2:23978992-23979011 | None:intergenic | 35.0% | |
| !! | TATAAGTGGTGGACATTCTT+CGG | + | chr3_2:23979084-23979103 | Msa0400060:intron | 35.0% |
| ATTTATTGAGCCATCCCTAA+CGG | + | chr3_2:23979113-23979132 | Msa0400060:intron | 35.0% | |
| ! | GAATTTTGCTTGATCCGTTA+GGG | - | chr3_2:23979130-23979149 | None:intergenic | 35.0% |
| ! | AGAATTTTGCTTGATCCGTT+AGG | - | chr3_2:23979131-23979150 | None:intergenic | 35.0% |
| CTATGATTGCATTCAGTTTC+CGG | + | chr3_2:23979279-23979298 | Msa0400060:intron | 35.0% | |
| TATGATTGCATTCAGTTTCC+GGG | + | chr3_2:23979280-23979299 | Msa0400060:intron | 35.0% | |
| TACTTCAAATTAGGCATCAG+AGG | + | chr3_2:23979342-23979361 | Msa0400060:CDS | 35.0% | |
| ! | TGAAGGATTTGCAGATTTTC+AGG | + | chr3_2:23979543-23979562 | Msa0400060:CDS | 35.0% |
| TTAATCATACGGTCTAGATG+GGG | + | chr3_2:23979669-23979688 | Msa0400060:intron | 35.0% | |
| ATCAATAGGTGGTCTATTGT+TGG | + | chr3_2:23979833-23979852 | Msa0400060:intron | 35.0% | |
| GTTATTCACCTAATCAGACT+AGG | + | chr3_2:23980254-23980273 | Msa0400060:CDS | 35.0% | |
| !! | TCATTAGCCTTTGTCTTTGA+TGG | + | chr3_2:23980431-23980450 | Msa0400060:CDS | 35.0% |
| !!! | GTAAGGGTTTTATTGGTATC+TGG | + | chr3_2:23980651-23980670 | Msa0400060:CDS | 35.0% |
| TGAAAGCAAGTAACTGTTTG+TGG | + | chr3_2:23980741-23980760 | Msa0400060:intron | 35.0% | |
| ATAAGCGCTCATCATAAAAG+TGG | - | chr3_2:23980911-23980930 | None:intergenic | 35.0% | |
| !! | GTAGTTTTTGCATCTAAGGT+AGG | + | chr3_2:23981009-23981028 | Msa0400060:intron | 35.0% |
| ATGTCAAATGATATGCAGGA+TGG | + | chr3_2:23981260-23981279 | Msa0400060:intron | 35.0% | |
| TGTCAAATGATATGCAGGAT+GGG | + | chr3_2:23981261-23981280 | Msa0400060:intron | 35.0% | |
| TATATCCTCAAGACAATGTG+TGG | - | chr3_2:23981320-23981339 | None:intergenic | 35.0% | |
| CTCTACTATAGTGATAGTCT+CGG | + | chr3_2:23981439-23981458 | Msa0400060:three_prime_UTR | 35.0% | |
| ACAACACTAGGACGTATAAA+TGG | - | chr3_2:23981471-23981490 | None:intergenic | 35.0% | |
| ATGTTGTCAATTGTGGAATG+CGG | + | chr3_2:23981505-23981524 | Msa0400060:three_prime_UTR | 35.0% | |
| TAGAAGAATCAGGTCTAATC+GGG | - | chr3_2:23981596-23981615 | None:intergenic | 35.0% | |
| GTAGAAGAATCAGGTCTAAT+CGG | - | chr3_2:23981597-23981616 | None:intergenic | 35.0% | |
| TACTCAGTGTTGTCAAATAG+GGG | - | chr3_2:23981646-23981665 | None:intergenic | 35.0% | |
| GATACTCAGTGTTGTCAAAT+AGG | - | chr3_2:23981648-23981667 | None:intergenic | 35.0% | |
| !! | AAGAGTGTGTAGCCTTTTTG+AGG | + | chr3_2:23972868-23972887 | Msa0400060:five_prime_UTR | 40.0% |
| ! | AGAGTGTGTAGCCTTTTTGA+GGG | + | chr3_2:23972869-23972888 | Msa0400060:five_prime_UTR | 40.0% |
| ATCAAACCTTAGGAGAACTC+AGG | + | chr3_2:23972962-23972981 | Msa0400060:five_prime_UTR | 40.0% | |
| TATGTTAGTCGTTGGTCCAA+CGG | - | chr3_2:23973075-23973094 | None:intergenic | 40.0% | |
| ATACATGTAAAGCTGCGTGT+TGG | - | chr3_2:23973304-23973323 | None:intergenic | 40.0% | |
| ! | GCATGACTTGCATTTCCAAT+TGG | + | chr3_2:23973333-23973352 | Msa0400060:intron | 40.0% |
| !! | GTGTGTTTTTGTCAGGCTTT+TGG | - | chr3_2:23973662-23973681 | None:intergenic | 40.0% |
| GGTATTAAATGGAAGCTGAG+TGG | - | chr3_2:23974138-23974157 | None:intergenic | 40.0% | |
| GTACAAGGTGAATATGGTCA+CGG | - | chr3_2:23974601-23974620 | None:intergenic | 40.0% | |
| GTGACCATATTCACCTTGTA+CGG | + | chr3_2:23974600-23974619 | Msa0400060:intron | 40.0% | |
| CTCTTAACGTAATCCGTACA+AGG | - | chr3_2:23974616-23974635 | None:intergenic | 40.0% | |
| ! | CTTGTACGGATTACGTTAAG+AGG | + | chr3_2:23974614-23974633 | Msa0400060:intron | 40.0% |
| !!! | GAACATGTTTTGGCCTTTCT+GGG | - | chr3_2:23974778-23974797 | None:intergenic | 40.0% |
| TTACTTTCCTCATTCCGTAG+TGG | + | chr3_2:23974816-23974835 | Msa0400060:intron | 40.0% | |
| AAAATGTTAACTAGTGCCCC+CGG | + | chr3_2:23975127-23975146 | Msa0400060:intron | 40.0% | |
| CTTTGACTACACAAGTTCCA+AGG | - | chr3_2:23975188-23975207 | None:intergenic | 40.0% | |
| TGCATACAATATGCAAGGTC+TGG | + | chr3_2:23975628-23975647 | Msa0400060:intron | 40.0% | |
| GCATACAATATGCAAGGTCT+GGG | + | chr3_2:23975629-23975648 | Msa0400060:intron | 40.0% | |
| CATACAATATGCAAGGTCTG+GGG | + | chr3_2:23975630-23975649 | Msa0400060:intron | 40.0% | |
| !!! | CTACCTCTTTTTTTTGGTGG+TGG | - | chr3_2:23975668-23975687 | None:intergenic | 40.0% |
| CACCACCAAAAAAAAGAGGT+AGG | + | chr3_2:23975666-23975685 | Msa0400060:intron | 40.0% | |
| AGTTTCTCGCACGTCATATT+CGG | + | chr3_2:23975973-23975992 | Msa0400060:intron | 40.0% | |
| TCAGGTTAGGCTCATTCTTA+AGG | + | chr3_2:23976613-23976632 | Msa0400060:five_prime_UTR | 40.0% | |
| CAGGTTAGGCTCATTCTTAA+GGG | + | chr3_2:23976614-23976633 | Msa0400060:five_prime_UTR | 40.0% | |
| TATTCACCCTTCTTTCTTGG+AGG | + | chr3_2:23976800-23976819 | Msa0400060:intron | 40.0% | |
| GTTAGACTGATTGCATGTCA+TGG | + | chr3_2:23976896-23976915 | Msa0400060:intron | 40.0% | |
| ! | ATTGCACGGACTATAATCAG+AGG | - | chr3_2:23977287-23977306 | None:intergenic | 40.0% |
| GGGAATCCATCTTGAATACA+AGG | - | chr3_2:23977563-23977582 | None:intergenic | 40.0% | |
| ACAGCATTCATAGGTCACTT+AGG | + | chr3_2:23977660-23977679 | Msa0400060:CDS | 40.0% | |
| GATATTGTGAAGGGTAACCT+TGG | + | chr3_2:23977715-23977734 | Msa0400060:intron | 40.0% | |
| GTCATGTGACTAAAAGGTCA+CGG | + | chr3_2:23977757-23977776 | Msa0400060:intron | 40.0% | |
| TCATGTGACTAAAAGGTCAC+GGG | + | chr3_2:23977758-23977777 | Msa0400060:intron | 40.0% | |
| ! | GTTTTTAACACAAGAGGCTG+CGG | - | chr3_2:23977802-23977821 | None:intergenic | 40.0% |
| CAGCCTCTTGTGTTAAAAAC+AGG | + | chr3_2:23977802-23977821 | Msa0400060:intron | 40.0% | |
| TACGCTGGAACTTTATGTGT+AGG | + | chr3_2:23977876-23977895 | Msa0400060:intron | 40.0% | |
| ACGCTGGAACTTTATGTGTA+GGG | + | chr3_2:23977877-23977896 | Msa0400060:intron | 40.0% | |
| AGCTTGGTTGAATACAGCAA+TGG | - | chr3_2:23978046-23978065 | None:intergenic | 40.0% | |
| CTGTATTCAACCAAGCTTCA+AGG | + | chr3_2:23978049-23978068 | Msa0400060:CDS | 40.0% | |
| TGTAGCCGAAGAAGATACTA+TGG | + | chr3_2:23978110-23978129 | Msa0400060:CDS | 40.0% | |
| TTGCTTCAAGACATAGAAGC+AGG | + | chr3_2:23978216-23978235 | Msa0400060:CDS | 40.0% | |
| ! | TTTCAAGGTACCATCCTGTT+TGG | - | chr3_2:23978247-23978266 | None:intergenic | 40.0% |
| ! | CATCTGTGTCGGTATCATTT+CGG | + | chr3_2:23978394-23978413 | Msa0400060:intron | 40.0% |
| TGTCGGTATCATTTCGGTAT+TGG | + | chr3_2:23978400-23978419 | Msa0400060:intron | 40.0% | |
| AGAGTGAGTCAAAACCTGTA+AGG | + | chr3_2:23978561-23978580 | Msa0400060:CDS | 40.0% | |
| CAAAACCTGTAAGGAAGAAG+AGG | + | chr3_2:23978570-23978589 | Msa0400060:CDS | 40.0% | |
| !! | GCATCTACCGCATTACTTTT+CGG | + | chr3_2:23978605-23978624 | Msa0400060:CDS | 40.0% |
| TAAGGGTTGCAGCTTGAATA+AGG | - | chr3_2:23978643-23978662 | None:intergenic | 40.0% | |
| AAACCCATTGCACCTAATAG+AGG | - | chr3_2:23978680-23978699 | None:intergenic | 40.0% | |
| CCATGCAAGGAATCTTTAGA+GGG | + | chr3_2:23978896-23978915 | Msa0400060:CDS | 40.0% | |
| CTCCTTTATATGTCATCGGT+AGG | + | chr3_2:23978935-23978954 | Msa0400060:intron | 40.0% | |
| GGTTATATCTCATCCAACGT+GGG | - | chr3_2:23979052-23979071 | None:intergenic | 40.0% | |
| AGGTTATATCTCATCCAACG+TGG | - | chr3_2:23979053-23979072 | None:intergenic | 40.0% | |
| GTATGCATTGAATGTCGCTA+TGG | + | chr3_2:23979302-23979321 | Msa0400060:CDS | 40.0% | |
| ATCTGCAAATCCTTCATGCT+TGG | - | chr3_2:23979539-23979558 | None:intergenic | 40.0% | |
| ! | GACAGTTCAAGTTTCATGCT+TGG | - | chr3_2:23979644-23979663 | None:intergenic | 40.0% |
| GAATGTCACTGCTATAACTC+TGG | - | chr3_2:23979859-23979878 | None:intergenic | 40.0% | |
| AAGGTTAGGTCCAATTCCAA+TGG | + | chr3_2:23979908-23979927 | Msa0400060:CDS | 40.0% | |
| TGGTTTAGCTGTTGCAATAC+AGG | + | chr3_2:23979983-23980002 | Msa0400060:CDS | 40.0% | |
| GCTAGAATTGCCTGTGATAA+AGG | - | chr3_2:23980086-23980105 | None:intergenic | 40.0% | |
| AAGTAACTACTGCTGCAACA+AGG | + | chr3_2:23980135-23980154 | Msa0400060:CDS | 40.0% | |
| !! | GTTGGAGGTGGATTATACTT+TGG | + | chr3_2:23980203-23980222 | Msa0400060:CDS | 40.0% |
| TTGTGCTGGGAAAATATACC+GGG | - | chr3_2:23980283-23980302 | None:intergenic | 40.0% | |
| GTTGTGCTGGGAAAATATAC+CGG | - | chr3_2:23980284-23980303 | None:intergenic | 40.0% | |
| CTAATCTATTGCGTTGTGCT+GGG | - | chr3_2:23980296-23980315 | None:intergenic | 40.0% | |
| ACTAATCTATTGCGTTGTGC+TGG | - | chr3_2:23980297-23980316 | None:intergenic | 40.0% | |
| GTTCACACCATCAAAGACAA+AGG | - | chr3_2:23980441-23980460 | None:intergenic | 40.0% | |
| !! | GTCTTTGATGGTGTGAACTA+TGG | + | chr3_2:23980443-23980462 | Msa0400060:CDS | 40.0% |
| CATGCGAAGACTCATATAGA+TGG | - | chr3_2:23980687-23980706 | None:intergenic | 40.0% | |
| ! | AGAACTAGAGTCGTCGATTA+AGG | - | chr3_2:23980972-23980991 | None:intergenic | 40.0% |
| !! | GACGACTCTAGTTCTTAACA+TGG | + | chr3_2:23980977-23980996 | Msa0400060:intron | 40.0% |
| ACGATACTGGATACAACACT+AGG | - | chr3_2:23981483-23981502 | None:intergenic | 40.0% | |
| ATTGACAACATGGACGATAC+TGG | - | chr3_2:23981496-23981515 | None:intergenic | 40.0% | |
| ATCGTCCATGTTGTCAATTG+TGG | + | chr3_2:23981498-23981517 | Msa0400060:three_prime_UTR | 40.0% | |
| GCATTCCACAATTGACAACA+TGG | - | chr3_2:23981506-23981525 | None:intergenic | 40.0% | |
| TCTAAGAGTAGGGGAAAGGT+TGG | + | chr3_2:23972899-23972918 | Msa0400060:five_prime_UTR | 45.0% | |
| GGAAGAGAGTGAAGAATGCA+AGG | - | chr3_2:23972931-23972950 | None:intergenic | 45.0% | |
| TGAGCTTAGCTCAGTTGGAA+TGG | + | chr3_2:23973762-23973781 | Msa0400060:intron | 45.0% | |
| CACATCTTTGTCTTTGGTGG+TGG | - | chr3_2:23973829-23973848 | None:intergenic | 45.0% | |
| CAAGAAGTAAAGTACGTGGC+AGG | - | chr3_2:23974297-23974316 | None:intergenic | 45.0% | |
| CCTACAGAAGCTATGAAGCA+CGG | - | chr3_2:23974534-23974553 | None:intergenic | 45.0% | |
| !!! | GGAACATGTTTTGGCCTTTC+TGG | - | chr3_2:23974779-23974798 | None:intergenic | 45.0% |
| AAATGTTAACTAGTGCCCCC+GGG | + | chr3_2:23975128-23975147 | Msa0400060:intron | 45.0% | |
| TGTTTCCTTAACTAGTGCCC+CGG | + | chr3_2:23975260-23975279 | Msa0400060:intron | 45.0% | |
| TCTTGTTAACTAGTGCCTCC+GGG | - | chr3_2:23975281-23975300 | None:intergenic | 45.0% | |
| ! | GTCTTGTTAACTAGTGCCTC+CGG | - | chr3_2:23975282-23975301 | None:intergenic | 45.0% |
| CATCGTGAGCTTAGCTCAAT+TGG | + | chr3_2:23975596-23975615 | Msa0400060:intron | 45.0% | |
| !!! | CTTTTTTTTGGTGGTGGTCG+AGG | - | chr3_2:23975662-23975681 | None:intergenic | 45.0% |
| CGACCACCACCAAAAAAAAG+AGG | + | chr3_2:23975662-23975681 | Msa0400060:intron | 45.0% | |
| !!! | GGCCTACCTCTTTTTTTTGG+TGG | - | chr3_2:23975671-23975690 | None:intergenic | 45.0% |
| TGACGTGCGAGAAACTCATA+GGG | - | chr3_2:23975969-23975988 | None:intergenic | 45.0% | |
| ATGACGTGCGAGAAACTCAT+AGG | - | chr3_2:23975970-23975989 | None:intergenic | 45.0% | |
| ! | CTTGGTAGGTTGTTCAGGTT+AGG | + | chr3_2:23976600-23976619 | Msa0400060:intron | 45.0% |
| TAGTTTCGACGTGATGAAGG+TGG | + | chr3_2:23977223-23977242 | Msa0400060:intron | 45.0% | |
| ! | CAAGATGGATTCCCTAGCTA+AGG | + | chr3_2:23977569-23977588 | Msa0400060:CDS | 45.0% |
| TCCCTAGCTAAGGAGATACT+TGG | + | chr3_2:23977579-23977598 | Msa0400060:CDS | 45.0% | |
| CCCAAGTATCTCCTTAGCTA+GGG | - | chr3_2:23977583-23977602 | None:intergenic | 45.0% | |
| CCCTAGCTAAGGAGATACTT+GGG | + | chr3_2:23977580-23977599 | Msa0400060:CDS | 45.0% | |
| TCCCAAGTATCTCCTTAGCT+AGG | - | chr3_2:23977584-23977603 | None:intergenic | 45.0% | |
| CAATCTTACCAGTTGTGCCA+AGG | - | chr3_2:23977735-23977754 | None:intergenic | 45.0% | |
| AAGGTCACGGGTTCAAATCT+TGG | + | chr3_2:23977770-23977789 | Msa0400060:intron | 45.0% | |
| TGCGACAATACACCAAATGG+TGG | + | chr3_2:23977832-23977851 | Msa0400060:intron | 45.0% | |
| GCGACAATACACCAAATGGT+GGG | + | chr3_2:23977833-23977852 | Msa0400060:intron | 45.0% | |
| ATAAAGTTCCAGCGTACGCA+GGG | - | chr3_2:23977872-23977891 | None:intergenic | 45.0% | |
| !! | GAACTGCTTTTCTGCTGCTT+TGG | - | chr3_2:23978148-23978167 | None:intergenic | 45.0% |
| AGGCATGACTTCATTCGACT+TGG | - | chr3_2:23978187-23978206 | None:intergenic | 45.0% | |
| CGAAATGATACCGACACAGA+TGG | - | chr3_2:23978396-23978415 | None:intergenic | 45.0% | |
| GTGCTGCATAGGATATGAGA+GGG | + | chr3_2:23978454-23978473 | Msa0400060:intron | 45.0% | |
| ATGTGCCTCTTCTTCCTTAC+AGG | - | chr3_2:23978578-23978597 | None:intergenic | 45.0% | |
| GACTGTGCCGAAAAGTAATG+CGG | - | chr3_2:23978615-23978634 | None:intergenic | 45.0% | |
| !! | TTACTTTTCGGCACAGTCCT+TGG | + | chr3_2:23978617-23978636 | Msa0400060:CDS | 45.0% |
| TTGCAGCTTGAATAAGGCCA+AGG | - | chr3_2:23978637-23978656 | None:intergenic | 45.0% | |
| AAAGATTCCTTGCATGGCCA+AGG | - | chr3_2:23978893-23978912 | None:intergenic | 45.0% | |
| GCCATGCAAGGAATCTTTAG+AGG | + | chr3_2:23978895-23978914 | Msa0400060:CDS | 45.0% | |
| ! | CCCTCTAAAGATTCCTTGCA+TGG | - | chr3_2:23978899-23978918 | None:intergenic | 45.0% |
| CATTGTTAAGAGTCCCACGT+TGG | + | chr3_2:23979036-23979055 | Msa0400060:intron | 45.0% | |
| TTTGCTTGATCCGTTAGGGA+TGG | - | chr3_2:23979126-23979145 | None:intergenic | 45.0% | |
| AGCGACATTCAATGCATACC+CGG | - | chr3_2:23979301-23979320 | None:intergenic | 45.0% | |
| ! | CTGAGAGAGCACATGTGAAA+TGG | - | chr3_2:23979373-23979392 | None:intergenic | 45.0% |
| AATCCTTCATGCTTGGAGGT+AGG | - | chr3_2:23979532-23979551 | None:intergenic | 45.0% | |
| TGCAAATCCTTCATGCTTGG+AGG | - | chr3_2:23979536-23979555 | None:intergenic | 45.0% | |
| AGTCTCGGGAGATAAATGGT+CGG | - | chr3_2:23979719-23979738 | None:intergenic | 45.0% | |
| TCTGAGTCTCGGGAGATAAA+TGG | - | chr3_2:23979723-23979742 | None:intergenic | 45.0% | |
| TGCTGCTAATGAGGCTGATA+AGG | - | chr3_2:23979889-23979908 | None:intergenic | 45.0% | |
| TATCAGCCTCATTAGCAGCA+AGG | + | chr3_2:23979889-23979908 | Msa0400060:CDS | 45.0% | |
| ACCTAACCTTGCTGCTAATG+AGG | - | chr3_2:23979898-23979917 | None:intergenic | 45.0% | |
| TGGAATGCAGCCATTGGAAT+TGG | - | chr3_2:23979921-23979940 | None:intergenic | 45.0% | |
| AGCTAAACCATCAGCGAGAA+GGG | - | chr3_2:23979973-23979992 | None:intergenic | 45.0% | |
| GTTGGACTCTCTCTAGTAGT+TGG | + | chr3_2:23980185-23980204 | Msa0400060:CDS | 45.0% | |
| !! | GGTGGATTATACTTTGGAGC+CGG | + | chr3_2:23980209-23980228 | Msa0400060:CDS | 45.0% |
| CGCTTATTCTGCATACTCCT+TGG | + | chr3_2:23980478-23980497 | Msa0400060:CDS | 45.0% | |
| ATGAGTCTTCGCATGTTTGC+TGG | + | chr3_2:23980692-23980711 | Msa0400060:CDS | 45.0% | |
| ! | TTCGCATGTTTGCTGGTGTA+TGG | + | chr3_2:23980699-23980718 | Msa0400060:CDS | 45.0% |
| ! | TCGTCGATTAAGGCCATGTT+AGG | - | chr3_2:23980962-23980981 | None:intergenic | 45.0% |
| CGATGTGATCGAGATGTTCT+TGG | - | chr3_2:23981125-23981144 | None:intergenic | 45.0% | |
| ATGATATGCAGGATGGGAAC+AGG | + | chr3_2:23981267-23981286 | Msa0400060:intron | 45.0% | |
| GACCTGATTCTTCTACGCTA+TGG | + | chr3_2:23981601-23981620 | Msa0400060:three_prime_UTR | 45.0% | |
| TGCCATAGCGTAGAAGAATC+AGG | - | chr3_2:23981606-23981625 | None:intergenic | 45.0% | |
| !!! | ATTTACTTTTTTTTTTTTAA+GGG | + | chr3_2:23973464-23973483 | Msa0400060:intron | 5.0% |
| !!! | TTATTTTTAAATATATTAGA+TGG | + | chr3_2:23973538-23973557 | Msa0400060:intron | 5.0% |
| !!! | TTTAGTTTTATTTTTATTTT+TGG | - | chr3_2:23973616-23973635 | None:intergenic | 5.0% |
| !!! | ATATTTAAAACAAATTTATA+TGG | - | chr3_2:23974975-23974994 | None:intergenic | 5.0% |
| !! | ATACTTTATAATTTAATTAA+GGG | - | chr3_2:23975304-23975323 | None:intergenic | 5.0% |
| !! | TATACTTTATAATTTAATTA+AGG | - | chr3_2:23975305-23975324 | None:intergenic | 5.0% |
| GGCATACCTGAGTTCTCCTA+AGG | - | chr3_2:23972971-23972990 | None:intergenic | 50.0% | |
| !! | TTTGTCTTTGGTGGTGGCCA+GGG | - | chr3_2:23973823-23973842 | None:intergenic | 50.0% |
| CCGTGCTTCATAGCTTCTGT+AGG | + | chr3_2:23974531-23974550 | Msa0400060:intron | 50.0% | |
| CAAGGTGAATATGGTCACGG+TGG | - | chr3_2:23974598-23974617 | None:intergenic | 50.0% | |
| AATGTTAACTAGTGCCCCCG+GGG | + | chr3_2:23975129-23975148 | Msa0400060:intron | 50.0% | |
| CTTGTTAACTAGTGCCTCCG+GGG | - | chr3_2:23975280-23975299 | None:intergenic | 50.0% | |
| CTCGTGCGTCCTATGTAGTT+CGG | - | chr3_2:23976073-23976092 | None:intergenic | 50.0% | |
| ! | GTTACTGTCAAGGGGGTGTA+TGG | + | chr3_2:23976131-23976150 | Msa0400060:intron | 50.0% |
| ! | TCAAGGGGGTGTATGGAACT+GGG | + | chr3_2:23976138-23976157 | Msa0400060:intron | 50.0% |
| CTGGGGAAGGCTCTTGAATT+AGG | + | chr3_2:23976156-23976175 | Msa0400060:intron | 50.0% | |
| CCTGCTCCTCCAAGAAAGAA+GGG | - | chr3_2:23976809-23976828 | None:intergenic | 50.0% | |
| CCTTCTTTCTTGGAGGAGCA+GGG | + | chr3_2:23976807-23976826 | Msa0400060:intron | 50.0% | |
| CAGCAACAGCAAGTGCAGAT+GGG | - | chr3_2:23977614-23977633 | None:intergenic | 50.0% | |
| AAGGGTAACCTTGGCACAAC+TGG | + | chr3_2:23977724-23977743 | Msa0400060:intron | 50.0% | |
| GGCTGCGACAATACACCAAA+TGG | + | chr3_2:23977829-23977848 | Msa0400060:intron | 50.0% | |
| CATAAAGTTCCAGCGTACGC+AGG | - | chr3_2:23977873-23977892 | None:intergenic | 50.0% | |
| AGAAGCAGGTGCAACCAAAC+AGG | + | chr3_2:23978230-23978249 | Msa0400060:CDS | 50.0% | |
| ! | CCACAGATTGAAGGCGTGTT+CGG | - | chr3_2:23978429-23978448 | None:intergenic | 50.0% |
| ACGCCTTCAATCTGTGGTGT+CGG | + | chr3_2:23978432-23978451 | Msa0400060:intron | 50.0% | |
| ! | GGTGCTGCATAGGATATGAG+AGG | + | chr3_2:23978453-23978472 | Msa0400060:intron | 50.0% |
| TTAACAGCTGGGACGAGCAT+AGG | - | chr3_2:23978826-23978845 | None:intergenic | 50.0% | |
| TCTCCTACCTCCAAGCATGA+AGG | + | chr3_2:23979526-23979545 | Msa0400060:CDS | 50.0% | |
| CGGGAGATAAATGGTCGGAT+CGG | - | chr3_2:23979714-23979733 | None:intergenic | 50.0% | |
| GCCTCATTAGCAGCAAGGTT+AGG | + | chr3_2:23979894-23979913 | Msa0400060:CDS | 50.0% | |
| ! | CAGGTTTGGAATGCAGCCAT+TGG | - | chr3_2:23979927-23979946 | None:intergenic | 50.0% |
| AGGATGTCATCCAAACCTGG+AGG | - | chr3_2:23979950-23979969 | None:intergenic | 50.0% | |
| TAAACCATCAGCGAGAAGGG+AGG | - | chr3_2:23979970-23979989 | None:intergenic | 50.0% | |
| CAGCTAAACCATCAGCGAGA+AGG | - | chr3_2:23979974-23979993 | None:intergenic | 50.0% | |
| GGACTCTCTCTAGTAGTTGG+AGG | + | chr3_2:23980188-23980207 | Msa0400060:CDS | 50.0% | |
| CTCTCTCTAGTAGTTGGAGG+TGG | + | chr3_2:23980191-23980210 | Msa0400060:CDS | 50.0% | |
| TGCTGGGAAAATATACCGGG+AGG | - | chr3_2:23980280-23980299 | None:intergenic | 50.0% | |
| ! | GCATGTTTGCTGGTGTATGG+AGG | + | chr3_2:23980702-23980721 | Msa0400060:CDS | 50.0% |
| AGAGGCCACACATTGTCTTG+AGG | + | chr3_2:23981312-23981331 | Msa0400060:CDS | 50.0% | |
| GTTACTCGAAAGTCGGCCGT+TGG | + | chr3_2:23973056-23973075 | Msa0400060:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr3_2:23973760-23973779 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr3_2:23973757-23973776 | Msa0400060:intron | 55.0% | |
| ! | AAGGTCTGGGGTTCAAACCC+TGG | + | chr3_2:23973803-23973822 | Msa0400060:intron | 55.0% |
| !! | CTTTGTCTTTGGTGGTGGCC+AGG | - | chr3_2:23973824-23973843 | None:intergenic | 55.0% |
| GCAAGGATACGGACACGACA+TGG | + | chr3_2:23974388-23974407 | Msa0400060:intron | 55.0% | |
| GACACGACACGTGTCTGACA+CGG | + | chr3_2:23974484-23974503 | Msa0400060:intron | 55.0% | |
| ACACGACACGTGTCTGACAC+GGG | + | chr3_2:23974485-23974504 | Msa0400060:intron | 55.0% | |
| GCACGGACACTCCTCGAATA+AGG | - | chr3_2:23974517-23974536 | None:intergenic | 55.0% | |
| TTTCCTTAACCAGTGCCCCG+GGG | - | chr3_2:23975147-23975166 | None:intergenic | 55.0% | |
| GTTTCCTTAACCAGTGCCCC+GGG | - | chr3_2:23975148-23975167 | None:intergenic | 55.0% | |
| GGTTTCCTTAACCAGTGCCC+CGG | - | chr3_2:23975149-23975168 | None:intergenic | 55.0% | |
| TTCCTTAACTAGTGCCCCGG+AGG | + | chr3_2:23975263-23975282 | Msa0400060:intron | 55.0% | |
| ! | GTCAAGGGGGTGTATGGAAC+TGG | + | chr3_2:23976137-23976156 | Msa0400060:intron | 55.0% |
| ! | CAAGGGGGTGTATGGAACTG+GGG | + | chr3_2:23976139-23976158 | Msa0400060:intron | 55.0% |
| CCCTTCTTTCTTGGAGGAGC+AGG | + | chr3_2:23976806-23976825 | Msa0400060:intron | 55.0% | |
| CCCTGCTCCTCCAAGAAAGA+AGG | - | chr3_2:23976810-23976829 | None:intergenic | 55.0% | |
| GCAGCAACAGCAAGTGCAGA+TGG | - | chr3_2:23977615-23977634 | None:intergenic | 55.0% | |
| ! | CAAATGGTGGGACCTCTTCC+CGG | + | chr3_2:23977845-23977864 | Msa0400060:intron | 55.0% |
| ! | TTTAGGGCCGGTCGAACTTG+CGG | + | chr3_2:23978008-23978027 | Msa0400060:intron | 55.0% |
| GCAGGTGCAACCAAACAGGA+TGG | + | chr3_2:23978234-23978253 | Msa0400060:CDS | 55.0% | |
| CCGAACACGCCTTCAATCTG+TGG | + | chr3_2:23978426-23978445 | Msa0400060:intron | 55.0% | |
| ! | GCACCGACACCACAGATTGA+AGG | - | chr3_2:23978438-23978457 | None:intergenic | 55.0% |
| !! | AAGCACTGCAGGAGCACCTA+AGG | - | chr3_2:23978866-23978885 | None:intergenic | 55.0% |
| TCCTGCAGTGCTTCTCTCCT+TGG | + | chr3_2:23978873-23978892 | Msa0400060:CDS | 55.0% | |
| CTTCTCTCCTTGGCCATGCA+AGG | + | chr3_2:23978883-23978902 | Msa0400060:CDS | 55.0% | |
| TGCATTCCAAACCTGCCTCC+AGG | + | chr3_2:23979932-23979951 | Msa0400060:CDS | 55.0% | |
| TCCAAACCTGCCTCCAGGTT+TGG | + | chr3_2:23979937-23979956 | Msa0400060:CDS | 55.0% | |
| TCCAAACCTGGAGGCAGGTT+TGG | - | chr3_2:23979941-23979960 | None:intergenic | 55.0% | |
| TGTCATCCAAACCTGGAGGC+AGG | - | chr3_2:23979946-23979965 | None:intergenic | 55.0% | |
| GGGAGGATGTCATCCAAACC+TGG | - | chr3_2:23979953-23979972 | None:intergenic | 55.0% | |
| ACATCCTCCCTTCTCGCTGA+TGG | + | chr3_2:23979963-23979982 | Msa0400060:CDS | 55.0% | |
| CCTAATCAGACTAGGCCTCC+CGG | + | chr3_2:23980262-23980281 | Msa0400060:CDS | 55.0% | |
| TGCAGGATGGGAACAGGAAC+AGG | + | chr3_2:23981273-23981292 | Msa0400060:intron | 55.0% | |
| ! | TGGCCTCTGAGAAAACGCCA+GGG | - | chr3_2:23981300-23981319 | None:intergenic | 55.0% |
| CACGACACGTGTCTGACACG+GGG | + | chr3_2:23974486-23974505 | Msa0400060:intron | 60.0% | |
| ! | ACGGGGACACGCCTTATTCG+AGG | + | chr3_2:23974503-23974522 | Msa0400060:intron | 60.0% |
| TTCCTTAACCAGTGCCCCGG+GGG | - | chr3_2:23975146-23975165 | None:intergenic | 60.0% | |
| ! | TGCCTCCGGGGCACTAGTTA+AGG | - | chr3_2:23975268-23975287 | None:intergenic | 60.0% |
| GGGGTGTATGGAACTGGGGA+AGG | + | chr3_2:23976143-23976162 | Msa0400060:intron | 60.0% | |
| CGGGAAGAGGTCCCACCATT+TGG | - | chr3_2:23977847-23977866 | None:intergenic | 60.0% | |
| !! | CTGTGGTGTCGGTGCTGCAT+AGG | + | chr3_2:23978443-23978462 | Msa0400060:intron | 60.0% |
| !! | GCCAAGGAGAGAAGCACTGC+AGG | - | chr3_2:23978877-23978896 | None:intergenic | 60.0% |
| CCGGGAGGCCTAGTCTGATT+AGG | - | chr3_2:23980265-23980284 | None:intergenic | 60.0% | |
| TGGGAACAGGAACAGGACCC+TGG | + | chr3_2:23981280-23981299 | Msa0400060:CDS | 60.0% | |
| ! | GGACCCTGGCGTTTTCTCAG+AGG | + | chr3_2:23981294-23981313 | Msa0400060:CDS | 60.0% |
| ! | GTGGCCTCTGAGAAAACGCC+AGG | - | chr3_2:23981301-23981320 | None:intergenic | 60.0% |
| TTCCAGCGTACGCAGGGTCC+GGG | - | chr3_2:23977866-23977885 | None:intergenic | 65.0% | |
| GTTCCAGCGTACGCAGGGTC+CGG | - | chr3_2:23977867-23977886 | None:intergenic | 65.0% | |
| AACTAGTGCCCCCGGGGCAC+TGG | + | chr3_2:23975135-23975154 | Msa0400060:intron | 70.0% | |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr3_2:23975141-23975160 | Msa0400060:intron | 70.0% |
| CGTACGCAGGGTCCGGGAAG+AGG | - | chr3_2:23977860-23977879 | None:intergenic | 70.0% | |
| TTCCCGGACCCTGCGTACGC+TGG | + | chr3_2:23977861-23977880 | Msa0400060:intron | 70.0% | |
| AGGGCCGGTCGAACTTGCGG+CGG | + | chr3_2:23978011-23978030 | Msa0400060:intron | 70.0% | |
| CCTGCCGCCGCAAGTTCGAC+CGG | - | chr3_2:23978018-23978037 | None:intergenic | 70.0% | |
| CCGGTCGAACTTGCGGCGGC+AGG | + | chr3_2:23978015-23978034 | Msa0400060:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 23972844 | 23981868 | 23972844 | ID=Msa0400060;Name=Msa0400060 |
| chr3_2 | mRNA | 23972844 | 23981868 | 23972844 | ID=Msa0400060-mRNA-1;Parent=Msa0400060;Name=Msa0400060-mRNA-1;_AED=0.08;_eAED=0.08;_QI=227|1|1|1|0.91|0.84|13|536|544 |
| chr3_2 | exon | 23972844 | 23972983 | 23972844 | ID=Msa0400060-mRNA-1:exon:5032;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23976608 | 23976774 | 23976608 | ID=Msa0400060-mRNA-1:exon:5033;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23977560 | 23977681 | 23977560 | ID=Msa0400060-mRNA-1:exon:5034;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23978013 | 23978288 | 23978013 | ID=Msa0400060-mRNA-1:exon:5035;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23978510 | 23978706 | 23978510 | ID=Msa0400060-mRNA-1:exon:5036;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23978817 | 23978952 | 23978817 | ID=Msa0400060-mRNA-1:exon:5037;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23979295 | 23979391 | 23979295 | ID=Msa0400060-mRNA-1:exon:5038;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23979478 | 23979578 | 23979478 | ID=Msa0400060-mRNA-1:exon:5039;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23979841 | 23980004 | 23979841 | ID=Msa0400060-mRNA-1:exon:5040;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23980095 | 23980283 | 23980095 | ID=Msa0400060-mRNA-1:exon:5041;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23980404 | 23980499 | 23980404 | ID=Msa0400060-mRNA-1:exon:5042;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23980602 | 23980723 | 23980602 | ID=Msa0400060-mRNA-1:exon:5043;Parent=Msa0400060-mRNA-1 |
| chr3_2 | exon | 23981278 | 23981868 | 23981278 | ID=Msa0400060-mRNA-1:exon:5044;Parent=Msa0400060-mRNA-1 |
| chr3_2 | five_prime_UTR | 23972844 | 23972983 | 23972844 | ID=Msa0400060-mRNA-1:five_prime_utr;Parent=Msa0400060-mRNA-1 |
| chr3_2 | five_prime_UTR | 23976608 | 23976694 | 23976608 | ID=Msa0400060-mRNA-1:five_prime_utr;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23976695 | 23976774 | 23976695 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23977560 | 23977681 | 23977560 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23978013 | 23978288 | 23978013 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23978510 | 23978706 | 23978510 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23978817 | 23978952 | 23978817 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23979295 | 23979391 | 23979295 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23979478 | 23979578 | 23979478 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23979841 | 23980004 | 23979841 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23980095 | 23980283 | 23980095 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23980404 | 23980499 | 23980404 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23980602 | 23980723 | 23980602 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | CDS | 23981278 | 23981332 | 23981278 | ID=Msa0400060-mRNA-1:cds;Parent=Msa0400060-mRNA-1 |
| chr3_2 | three_prime_UTR | 23981333 | 23981868 | 23981333 | ID=Msa0400060-mRNA-1:three_prime_utr;Parent=Msa0400060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
