Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524960 | XP_003603420.1 | 94.545 | 330 | 12 | 1 | 1 | 324 | 1 | 330 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524960 | sp|Q8H0V5|OCP3_ARATH | 48.659 | 261 | 125 | 1 | 66 | 317 | 91 | 351 | 1.32e-65 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524960 | G7JB43 | 94.545 | 330 | 12 | 1 | 1 | 324 | 1 | 330 | 0.0 | 572 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0524960 | TF | HB-other |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012380 | Msa0524960 | 0.839050 | 1.998017e-57 | -8.615850e-47 |
| Msa0012460 | Msa0524960 | 0.814184 | 1.752825e-51 | -8.615850e-47 |
| Msa0017130 | Msa0524960 | 0.836080 | 1.153608e-56 | -8.615850e-47 |
| Msa0021710 | Msa0524960 | 0.808287 | 3.335903e-50 | -8.615850e-47 |
| Msa0024900 | Msa0524960 | 0.820248 | 7.582381e-53 | -8.615850e-47 |
| Msa0027030 | Msa0524960 | 0.816001 | 6.924334e-52 | -8.615850e-47 |
| Msa0033930 | Msa0524960 | 0.814576 | 1.435706e-51 | -8.615850e-47 |
| Msa0036550 | Msa0524960 | -0.814045 | 1.881472e-51 | -8.615850e-47 |
| Msa0037270 | Msa0524960 | 0.807660 | 4.535976e-50 | -8.615850e-47 |
| Msa0037300 | Msa0524960 | 0.820284 | 7.441418e-53 | -8.615850e-47 |
| Msa0039550 | Msa0524960 | 0.813522 | 2.452583e-51 | -8.615850e-47 |
| Msa0042210 | Msa0524960 | 0.806413 | 8.327696e-50 | -8.615850e-47 |
| Msa0044180 | Msa0524960 | 0.800510 | 1.393652e-48 | -8.615850e-47 |
| Msa0044380 | Msa0524960 | 0.801847 | 7.421918e-49 | -8.615850e-47 |
| Msa0046050 | Msa0524960 | 0.840025 | 1.114614e-57 | -8.615850e-47 |
| Msa0046800 | Msa0524960 | 0.804874 | 1.751808e-49 | -8.615850e-47 |
| Msa0052550 | Msa0524960 | 0.845094 | 5.030423e-59 | -8.615850e-47 |
| Msa0053210 | Msa0524960 | 0.857781 | 1.291997e-62 | -8.615850e-47 |
| Msa0057340 | Msa0524960 | 0.802530 | 5.371067e-49 | -8.615850e-47 |
| Msa0061060 | Msa0524960 | 0.838627 | 2.570683e-57 | -8.615850e-47 |
| Msa0061320 | Msa0524960 | 0.803913 | 2.778539e-49 | -8.615850e-47 |
| Msa0066860 | Msa0524960 | 0.829055 | 6.374549e-55 | -8.615850e-47 |
| Msa0066990 | Msa0524960 | 0.800863 | 1.180670e-48 | -8.615850e-47 |
| Msa0081120 | Msa0524960 | 0.815388 | 9.486591e-52 | -8.615850e-47 |
| Msa0081790 | Msa0524960 | 0.813330 | 2.703891e-51 | -8.615850e-47 |
| Msa0084390 | Msa0524960 | -0.806081 | 9.781457e-50 | -8.615850e-47 |
| Msa0087130 | Msa0524960 | 0.803662 | 3.132376e-49 | -8.615850e-47 |
| Msa0089510 | Msa0524960 | 0.871414 | 6.959428e-67 | -8.615850e-47 |
| Msa0089520 | Msa0524960 | 0.872650 | 2.702205e-67 | -8.615850e-47 |
| Msa0090760 | Msa0524960 | 0.810345 | 1.207373e-50 | -8.615850e-47 |
| Msa0090860 | Msa0524960 | 0.800432 | 1.445022e-48 | -8.615850e-47 |
| Msa0098550 | Msa0524960 | 0.851251 | 1.002078e-60 | -8.615850e-47 |
| Msa0114700 | Msa0524960 | 0.826759 | 2.274821e-54 | -8.615850e-47 |
| Msa0115010 | Msa0524960 | 0.803666 | 3.126096e-49 | -8.615850e-47 |
| Msa0120120 | Msa0524960 | 0.806586 | 7.653507e-50 | -8.615850e-47 |
| Msa0120180 | Msa0524960 | 0.803267 | 3.783061e-49 | -8.615850e-47 |
| Msa0130710 | Msa0524960 | -0.832894 | 7.285060e-56 | -8.615850e-47 |
| Msa0133450 | Msa0524960 | 0.815172 | 1.059333e-51 | -8.615850e-47 |
| Msa0137010 | Msa0524960 | 0.803545 | 3.312615e-49 | -8.615850e-47 |
| Msa0140290 | Msa0524960 | 0.848831 | 4.769267e-60 | -8.615850e-47 |
| Msa0144340 | Msa0524960 | 0.808701 | 2.721008e-50 | -8.615850e-47 |
| Msa0149070 | Msa0524960 | 0.807454 | 5.016435e-50 | -8.615850e-47 |
| Msa0152380 | Msa0524960 | 0.804701 | 1.903687e-49 | -8.615850e-47 |
| Msa0155550 | Msa0524960 | 0.817168 | 3.791938e-52 | -8.615850e-47 |
| Msa0157030 | Msa0524960 | 0.830545 | 2.764787e-55 | -8.615850e-47 |
| Msa0167150 | Msa0524960 | 0.801165 | 1.023815e-48 | -8.615850e-47 |
| Msa0171920 | Msa0524960 | 0.835311 | 1.807006e-56 | -8.615850e-47 |
| Msa0175210 | Msa0524960 | 0.828675 | 7.878584e-55 | -8.615850e-47 |
| Msa0176600 | Msa0524960 | -0.824257 | 8.901935e-54 | -8.615850e-47 |
| Msa0178020 | Msa0524960 | 0.823285 | 1.503946e-53 | -8.615850e-47 |
| Msa0178940 | Msa0524960 | 0.824082 | 9.785987e-54 | -8.615850e-47 |
| Msa0183490 | Msa0524960 | 0.808147 | 3.572750e-50 | -8.615850e-47 |
| Msa0191180 | Msa0524960 | 0.803223 | 3.862791e-49 | -8.615850e-47 |
| Msa0199740 | Msa0524960 | 0.827049 | 1.939030e-54 | -8.615850e-47 |
| Msa0213510 | Msa0524960 | 0.809097 | 2.238705e-50 | -8.615850e-47 |
| Msa0216390 | Msa0524960 | 0.832617 | 8.535112e-56 | -8.615850e-47 |
| Msa0233200 | Msa0524960 | 0.880980 | 3.508894e-70 | -8.615850e-47 |
| Msa0367590 | Msa0524960 | 0.800880 | 1.170833e-48 | -8.615850e-47 |
| Msa0369100 | Msa0524960 | 0.803331 | 3.667676e-49 | -8.615850e-47 |
| Msa0373220 | Msa0524960 | 0.836622 | 8.400105e-57 | -8.615850e-47 |
| Msa0375570 | Msa0524960 | 0.807445 | 5.036487e-50 | -8.615850e-47 |
| Msa0376480 | Msa0524960 | 0.824982 | 6.007995e-54 | -8.615850e-47 |
| Msa0380520 | Msa0524960 | 0.813024 | 3.154759e-51 | -8.615850e-47 |
| Msa0380650 | Msa0524960 | 0.822224 | 2.656074e-53 | -8.615850e-47 |
| Msa0388200 | Msa0524960 | 0.819160 | 1.344003e-52 | -8.615850e-47 |
| Msa0392050 | Msa0524960 | 0.824120 | 9.585714e-54 | -8.615850e-47 |
| Msa0392540 | Msa0524960 | 0.848153 | 7.350173e-60 | -8.615850e-47 |
| Msa0393540 | Msa0524960 | 0.800417 | 1.455270e-48 | -8.615850e-47 |
| Msa0393880 | Msa0524960 | 0.858950 | 5.791424e-63 | -8.615850e-47 |
| Msa0400060 | Msa0524960 | -0.815055 | 1.124573e-51 | -8.615850e-47 |
| Msa0401370 | Msa0524960 | 0.811404 | 7.122687e-51 | -8.615850e-47 |
| Msa0404070 | Msa0524960 | 0.853671 | 2.047915e-61 | -8.615850e-47 |
| Msa0412470 | Msa0524960 | 0.805955 | 1.039420e-49 | -8.615850e-47 |
| Msa0419040 | Msa0524960 | 0.828578 | 8.316602e-55 | -8.615850e-47 |
| Msa0420800 | Msa0524960 | 0.817673 | 2.919213e-52 | -8.615850e-47 |
| Msa0421720 | Msa0524960 | 0.817090 | 3.948118e-52 | -8.615850e-47 |
| Msa0424220 | Msa0524960 | 0.817755 | 2.797650e-52 | -8.615850e-47 |
| Msa0425320 | Msa0524960 | 0.806843 | 6.754492e-50 | -8.615850e-47 |
| Msa0428280 | Msa0524960 | 0.817920 | 2.567107e-52 | -8.615850e-47 |
| Msa0428330 | Msa0524960 | 0.803138 | 4.021890e-49 | -8.615850e-47 |
| Msa0430020 | Msa0524960 | 0.825726 | 4.005409e-54 | -8.615850e-47 |
| Msa0430040 | Msa0524960 | 0.811987 | 5.317665e-51 | -8.615850e-47 |
| Msa0430290 | Msa0524960 | 0.824378 | 8.340205e-54 | -8.615850e-47 |
| Msa0433670 | Msa0524960 | 0.816304 | 5.923952e-52 | -8.615850e-47 |
| Msa0437790 | Msa0524960 | 0.848049 | 7.848160e-60 | -8.615850e-47 |
| Msa0440310 | Msa0524960 | 0.823435 | 1.387247e-53 | -8.615850e-47 |
| Msa0440720 | Msa0524960 | 0.819170 | 1.336931e-52 | -8.615850e-47 |
| Msa0441670 | Msa0524960 | 0.861761 | 8.175457e-64 | -8.615850e-47 |
| Msa0443820 | Msa0524960 | -0.807538 | 4.812741e-50 | -8.615850e-47 |
| Msa0444340 | Msa0524960 | 0.843375 | 1.456780e-58 | -8.615850e-47 |
| Msa0460220 | Msa0524960 | 0.810620 | 1.053034e-50 | -8.615850e-47 |
| Msa0462120 | Msa0524960 | 0.805704 | 1.173677e-49 | -8.615850e-47 |
| Msa0463150 | Msa0524960 | 0.807099 | 5.964832e-50 | -8.615850e-47 |
| Msa0467080 | Msa0524960 | 0.827302 | 1.686603e-54 | -8.615850e-47 |
| Msa0468020 | Msa0524960 | 0.836133 | 1.118396e-56 | -8.615850e-47 |
| Msa0469950 | Msa0524960 | 0.824670 | 7.118067e-54 | -8.615850e-47 |
| Msa0471130 | Msa0524960 | 0.803738 | 3.020582e-49 | -8.615850e-47 |
| Msa0471760 | Msa0524960 | 0.823976 | 1.036437e-53 | -8.615850e-47 |
| Msa0474640 | Msa0524960 | 0.821582 | 3.739264e-53 | -8.615850e-47 |
| Msa0477550 | Msa0524960 | 0.812263 | 4.629875e-51 | -8.615850e-47 |
| Msa0480430 | Msa0524960 | 0.986150 | 7.773462e-166 | -8.615850e-47 |
| Msa0481490 | Msa0524960 | 0.814363 | 1.600796e-51 | -8.615850e-47 |
| Msa0242290 | Msa0524960 | 0.822053 | 2.909577e-53 | -8.615850e-47 |
| Msa0253160 | Msa0524960 | 0.835407 | 1.708932e-56 | -8.615850e-47 |
| Msa0256590 | Msa0524960 | 0.800425 | 1.449890e-48 | -8.615850e-47 |
| Msa0266100 | Msa0524960 | 0.801164 | 1.024464e-48 | -8.615850e-47 |
| Msa0272570 | Msa0524960 | 0.815006 | 1.153267e-51 | -8.615850e-47 |
| Msa0280120 | Msa0524960 | 0.821218 | 4.539127e-53 | -8.615850e-47 |
| Msa0280500 | Msa0524960 | 0.816125 | 6.496545e-52 | -8.615850e-47 |
| Msa0291940 | Msa0524960 | 0.831888 | 1.293214e-55 | -8.615850e-47 |
| Msa0295730 | Msa0524960 | 0.808129 | 3.603778e-50 | -8.615850e-47 |
| Msa0306160 | Msa0524960 | 0.841303 | 5.155670e-58 | -8.615850e-47 |
| Msa0313800 | Msa0524960 | 0.803891 | 2.807226e-49 | -8.615850e-47 |
| Msa0316380 | Msa0524960 | 0.806289 | 8.841772e-50 | -8.615850e-47 |
| Msa0319710 | Msa0524960 | 0.802589 | 5.222523e-49 | -8.615850e-47 |
| Msa0327900 | Msa0524960 | 0.802332 | 5.898622e-49 | -8.615850e-47 |
| Msa0330970 | Msa0524960 | 0.807968 | 3.900513e-50 | -8.615850e-47 |
| Msa0334280 | Msa0524960 | 0.820302 | 7.369959e-53 | -8.615850e-47 |
| Msa0344680 | Msa0524960 | 0.823921 | 1.067404e-53 | -8.615850e-47 |
| Msa0347060 | Msa0524960 | 0.809487 | 1.847246e-50 | -8.615850e-47 |
| Msa0347280 | Msa0524960 | 0.866755 | 2.260316e-65 | -8.615850e-47 |
| Msa0485210 | Msa0524960 | 0.805878 | 1.079196e-49 | -8.615850e-47 |
| Msa0487490 | Msa0524960 | 0.807878 | 4.075396e-50 | -8.615850e-47 |
| Msa0488830 | Msa0524960 | 0.800301 | 1.536781e-48 | -8.615850e-47 |
| Msa0489330 | Msa0524960 | 0.869816 | 2.331564e-66 | -8.615850e-47 |
| Msa0494750 | Msa0524960 | -0.810094 | 1.367359e-50 | -8.615850e-47 |
| Msa0500490 | Msa0524960 | 0.802568 | 5.275580e-49 | -8.615850e-47 |
| Msa0503220 | Msa0524960 | -0.823662 | 1.227539e-53 | -8.615850e-47 |
| Msa0515460 | Msa0524960 | 0.820947 | 5.240198e-53 | -8.615850e-47 |
| Msa0519090 | Msa0524960 | 0.830136 | 3.481376e-55 | -8.615850e-47 |
| Msa0521570 | Msa0524960 | 0.818063 | 2.383689e-52 | -8.615850e-47 |
| Msa0524830 | Msa0524960 | 0.910677 | 1.433637e-82 | -8.615850e-47 |
| Msa0524960 | Msa0525270 | 0.815600 | 8.509839e-52 | -8.615850e-47 |
| Msa0524960 | Msa0525280 | 0.806247 | 9.023940e-50 | -8.615850e-47 |
| Msa0524960 | Msa0545230 | 0.810830 | 9.485186e-51 | -8.615850e-47 |
| Msa0524960 | Msa0548210 | 0.819628 | 1.050858e-52 | -8.615850e-47 |
| Msa0524960 | Msa0549540 | 0.827737 | 1.325992e-54 | -8.615850e-47 |
| Msa0524960 | Msa0549760 | 0.815568 | 8.649465e-52 | -8.615850e-47 |
| Msa0524960 | Msa0552660 | 0.816976 | 4.188741e-52 | -8.615850e-47 |
| Msa0524960 | Msa0552670 | 0.810174 | 1.314323e-50 | -8.615850e-47 |
| Msa0524960 | Msa0556070 | 0.833143 | 6.315948e-56 | -8.615850e-47 |
| Msa0524960 | Msa0556080 | 0.803663 | 3.130492e-49 | -8.615850e-47 |
| Msa0524960 | Msa0557490 | 0.805445 | 1.330086e-49 | -8.615850e-47 |
| Msa0524960 | Msa0566090 | 0.816987 | 4.164146e-52 | -8.615850e-47 |
| Msa0524960 | Msa0574240 | 0.811362 | 7.270534e-51 | -8.615850e-47 |
| Msa0524960 | Msa0575670 | 0.824940 | 6.146318e-54 | -8.615850e-47 |
| Msa0524960 | Msa0576500 | 0.800826 | 1.200967e-48 | -8.615850e-47 |
| Msa0524960 | Msa0577090 | 0.802541 | 5.342243e-49 | -8.615850e-47 |
| Msa0524960 | Msa0604880 | 0.819262 | 1.273802e-52 | -8.615850e-47 |
| Msa0524960 | Msa0605250 | 0.816054 | 6.738718e-52 | -8.615850e-47 |
| Msa0524960 | Msa0608780 | 0.805858 | 1.089376e-49 | -8.615850e-47 |
| Msa0524960 | Msa0609790 | 0.830503 | 2.830831e-55 | -8.615850e-47 |
| Msa0524960 | Msa0612730 | 0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa0524960 | Msa0619350 | 0.820302 | 7.369959e-53 | -8.615850e-47 |
| Msa0524960 | Msa0620050 | 0.816108 | 6.553789e-52 | -8.615850e-47 |
| Msa0524960 | Msa0622250 | 0.858994 | 5.621065e-63 | -8.615850e-47 |
| Msa0524960 | Msa0623270 | 0.824881 | 6.346127e-54 | -8.615850e-47 |
| Msa0524960 | Msa0636720 | 0.844300 | 8.234008e-59 | -8.615850e-47 |
| Msa0524960 | Msa0644220 | 0.804002 | 2.662202e-49 | -8.615850e-47 |
| Msa0524960 | Msa0644630 | 0.864764 | 9.611889e-65 | -8.615850e-47 |
| Msa0524960 | Msa0645040 | 0.833046 | 6.676049e-56 | -8.615850e-47 |
| Msa0524960 | Msa0646190 | 0.825497 | 4.538294e-54 | -8.615850e-47 |
| Msa0524960 | Msa0647460 | 0.825252 | 5.187721e-54 | -8.615850e-47 |
| Msa0524960 | Msa0648560 | 0.822661 | 2.102364e-53 | -8.615850e-47 |
| Msa0524960 | Msa0648630 | 0.815797 | 7.690546e-52 | -8.615850e-47 |
| Msa0524960 | Msa0649250 | 0.806079 | 9.790998e-50 | -8.615850e-47 |
| Msa0524960 | Msa0652360 | 0.807926 | 3.981672e-50 | -8.615850e-47 |
| Msa0524960 | Msa0653690 | 0.803934 | 2.750787e-49 | -8.615850e-47 |
| Msa0524960 | Msa0677250 | 0.803949 | 2.731137e-49 | -8.615850e-47 |
| Msa0524960 | Msa0679780 | 0.802295 | 6.003084e-49 | -8.615850e-47 |
| Msa0524960 | Msa0684520 | 0.837371 | 5.406213e-57 | -8.615850e-47 |
| Msa0524960 | Msa0685520 | 0.805381 | 1.372011e-49 | -8.615850e-47 |
| Msa0524960 | Msa0685890 | 0.825925 | 3.592884e-54 | -8.615850e-47 |
| Msa0524960 | Msa0691100 | 0.824505 | 7.784825e-54 | -8.615850e-47 |
| Msa0524960 | Msa0693150 | 0.808890 | 2.479173e-50 | -8.615850e-47 |
| Msa0524960 | Msa0701460 | 0.816327 | 5.855187e-52 | -8.615850e-47 |
| Msa0524960 | Msa0701530 | 0.827930 | 1.191424e-54 | -8.615850e-47 |
| Msa0524960 | Msa0702120 | 0.803955 | 2.723146e-49 | -8.615850e-47 |
| Msa0524960 | Msa0702360 | 0.821233 | 4.500960e-53 | -8.615850e-47 |
| Msa0524960 | Msa0702560 | 0.825777 | 3.896753e-54 | -8.615850e-47 |
| Msa0524960 | Msa0704570 | 0.821921 | 3.122612e-53 | -8.615850e-47 |
| Msa0524960 | Msa0705810 | 0.839213 | 1.812611e-57 | -8.615850e-47 |
| Msa0524960 | Msa0706450 | 0.817320 | 3.506418e-52 | -8.615850e-47 |
| Msa0524960 | Msa0707880 | 0.802888 | 4.530870e-49 | -8.615850e-47 |
| Msa0524960 | Msa0712670 | 0.805466 | 1.317221e-49 | -8.615850e-47 |
| Msa0524960 | Msa0738280 | 0.808414 | 3.133769e-50 | -8.615850e-47 |
| Msa0524960 | Msa0742090 | 0.834789 | 2.445575e-56 | -8.615850e-47 |
| Msa0524960 | Msa0745010 | 0.830420 | 2.967160e-55 | -8.615850e-47 |
| Msa0524960 | Msa0748330 | 0.860486 | 1.997293e-63 | -8.615850e-47 |
| Msa0524960 | Msa0748890 | 0.808105 | 3.646314e-50 | -8.615850e-47 |
| Msa0524960 | Msa0766950 | 0.810476 | 1.131107e-50 | -8.615850e-47 |
| Msa0524960 | Msa0789800 | 0.818240 | 2.173098e-52 | -8.615850e-47 |
| Msa0524960 | Msa0793100 | 0.851717 | 7.399529e-61 | -8.615850e-47 |
| Msa0524960 | Msa0794130 | 0.841580 | 4.358307e-58 | -8.615850e-47 |
| Msa0524960 | Msa0813630 | 0.808843 | 2.537104e-50 | -8.615850e-47 |
| Msa0524960 | Msa0823310 | 0.810040 | 1.404353e-50 | -8.615850e-47 |
| Msa0524960 | Msa0825960 | 0.837482 | 5.063505e-57 | -8.615850e-47 |
| Msa0524960 | Msa0832270 | 0.800600 | 1.335541e-48 | -8.615850e-47 |
| Msa0524960 | Msa0833630 | 0.807006 | 6.240714e-50 | -8.615850e-47 |
| Msa0524960 | Msa0882700 | 0.806632 | 7.486688e-50 | -8.615850e-47 |
| Msa0524960 | Msa0909540 | 0.829874 | 4.031367e-55 | -8.615850e-47 |
| Msa0524960 | Msa0912110 | 0.807092 | 5.985497e-50 | -8.615850e-47 |
| Msa0524960 | Msa0928840 | 0.800835 | 1.196203e-48 | -8.615850e-47 |
| Msa0524960 | Msa0929940 | 0.801387 | 9.222720e-49 | -8.615850e-47 |
| Msa0524960 | Msa0940550 | 0.806326 | 8.686466e-50 | -8.615850e-47 |
| Msa0524960 | Msa0966410 | 0.833425 | 5.373075e-56 | -8.615850e-47 |
| Msa0524960 | Msa0967670 | 0.807311 | 5.378866e-50 | -8.615850e-47 |
| Msa0524960 | Msa0968780 | 0.811935 | 5.457217e-51 | -8.615850e-47 |
| Msa0524960 | Msa0970090 | 0.803183 | 3.935943e-49 | -8.615850e-47 |
| Msa0524960 | Msa0975550 | 0.823651 | 1.235037e-53 | -8.615850e-47 |
| Msa0524960 | Msa0977090 | 0.803741 | 3.015819e-49 | -8.615850e-47 |
| Msa0524960 | Msa0984000 | 0.804907 | 1.724553e-49 | -8.615850e-47 |
| Msa0524960 | Msa0995130 | 0.801391 | 9.207067e-49 | -8.615850e-47 |
| Msa0524960 | Msa1001780 | 0.801878 | 7.314072e-49 | -8.615850e-47 |
| Msa0524960 | Msa1019230 | -0.801207 | 1.003838e-48 | -8.615850e-47 |
| Msa0524960 | Msa1030430 | 0.801858 | 7.382243e-49 | -8.615850e-47 |
| Msa0524960 | Msa1034930 | 0.815800 | 7.677111e-52 | -8.615850e-47 |
| Msa0524960 | Msa1036020 | -0.809303 | 2.022551e-50 | -8.615850e-47 |
| Msa0524960 | Msa1040390 | 0.832764 | 7.845800e-56 | -8.615850e-47 |
| Msa0524960 | Msa1067910 | 0.809132 | 2.200968e-50 | -8.615850e-47 |
| Msa0524960 | Msa1068900 | -0.803594 | 3.236479e-49 | -8.615850e-47 |
| Msa0524960 | Msa1074980 | 0.807893 | 4.045411e-50 | -8.615850e-47 |
| Msa0524960 | Msa1076280 | -0.800481 | 1.412100e-48 | -8.615850e-47 |
| Msa0524960 | Msa1076520 | 0.803248 | 3.816974e-49 | -8.615850e-47 |
| Msa0524960 | Msa1076530 | 0.829696 | 4.456198e-55 | -8.615850e-47 |
| Msa0524960 | Msa1078600 | 0.814898 | 1.218753e-51 | -8.615850e-47 |
| Msa0524960 | Msa1078770 | 0.810848 | 9.398384e-51 | -8.615850e-47 |
| Msa0524960 | Msa1079480 | 0.834259 | 3.323345e-56 | -8.615850e-47 |
| Msa0524960 | Msa1082150 | 0.830080 | 3.590995e-55 | -8.615850e-47 |
| Msa0524960 | Msa1083140 | 0.853196 | 2.802832e-61 | -8.615850e-47 |
| Msa0524960 | Msa1090180 | -0.822496 | 2.295989e-53 | -8.615850e-47 |
| Msa0524960 | Msa1118460 | 0.813604 | 2.353032e-51 | -8.615850e-47 |
| Msa0524960 | Msa1127900 | 0.853730 | 1.969190e-61 | -8.615850e-47 |
| Msa0524960 | Msa1129540 | -0.800803 | 1.214050e-48 | -8.615850e-47 |
| Msa0524960 | Msa1130660 | 0.819022 | 1.444224e-52 | -8.615850e-47 |
| Msa0524960 | Msa1133440 | 0.812540 | 4.027567e-51 | -8.615850e-47 |
| Msa0524960 | Msa1144730 | 0.823105 | 1.656538e-53 | -8.615850e-47 |
| Msa0524960 | Msa1156670 | -0.816401 | 5.636529e-52 | -8.615850e-47 |
| Msa0524960 | Msa1157030 | 0.820613 | 6.252725e-53 | -8.615850e-47 |
| Msa0524960 | Msa1157680 | 0.801247 | 9.851307e-49 | -8.615850e-47 |
| Msa0524960 | Msa1165810 | 0.863952 | 1.723419e-64 | -8.615850e-47 |
| Msa0524960 | Msa1169600 | 0.809668 | 1.688447e-50 | -8.615850e-47 |
| Msa0524960 | Msa1177960 | 0.845472 | 3.975102e-59 | -8.615850e-47 |
| Msa0524960 | Msa1181510 | 0.832436 | 9.464303e-56 | -8.615850e-47 |
| Msa0524960 | Msa1191960 | 0.823833 | 1.119568e-53 | -8.615850e-47 |
| Msa0524960 | Msa1208750 | 0.804380 | 2.221249e-49 | -8.615850e-47 |
| Msa0524960 | Msa1209800 | 0.802889 | 4.528740e-49 | -8.615850e-47 |
| Msa0524960 | Msa1214080 | 0.803545 | 3.312533e-49 | -8.615850e-47 |
| Msa0524960 | Msa1219060 | 0.826626 | 2.447180e-54 | -8.615850e-47 |
| Msa0524960 | Msa1220680 | 0.851661 | 7.672193e-61 | -8.615850e-47 |
| Msa0524960 | Msa1224820 | 0.836563 | 8.695901e-57 | -8.615850e-47 |
| Msa0524960 | Msa1228350 | 0.816219 | 6.191747e-52 | -8.615850e-47 |
| Msa0524960 | Msa1237750 | 0.833376 | 5.526932e-56 | -8.615850e-47 |
| Msa0524960 | Msa1239900 | 0.809108 | 2.226723e-50 | -8.615850e-47 |
| Msa0524960 | Msa1255020 | 0.805973 | 1.030564e-49 | -8.615850e-47 |
| Msa0524960 | Msa1263590 | 0.851586 | 8.057520e-61 | -8.615850e-47 |
| Msa0524960 | Msa1263670 | 0.846612 | 1.946555e-59 | -8.615850e-47 |
| Msa0524960 | Msa1264670 | 0.806206 | 9.205528e-50 | -8.615850e-47 |
| Msa0524960 | Msa1269730 | 0.816574 | 5.154288e-52 | -8.615850e-47 |
| Msa0524960 | Msa1272340 | 0.809965 | 1.457560e-50 | -8.615850e-47 |
| Msa0524960 | Msa1281270 | 0.802749 | 4.840718e-49 | -8.615850e-47 |
| Msa0524960 | Msa1297490 | 0.802861 | 4.588889e-49 | -8.615850e-47 |
| Msa0524960 | Msa1312800 | 0.807162 | 5.783314e-50 | -8.615850e-47 |
| Msa0524960 | Msa1312840 | 0.816207 | 6.227235e-52 | -8.615850e-47 |
| Msa0524960 | Msa1318180 | 0.849849 | 2.482973e-60 | -8.615850e-47 |
| Msa0524960 | Msa1320380 | 0.810352 | 1.203255e-50 | -8.615850e-47 |
| Msa0524960 | Msa1333440 | 0.827060 | 1.927286e-54 | -8.615850e-47 |
| Msa0524960 | Msa1349810 | 0.809399 | 1.929129e-50 | -8.615850e-47 |
| Msa0524960 | Msa1358340 | 0.855015 | 8.374601e-62 | -8.615850e-47 |
| Msa0524960 | Msa1359890 | 0.846711 | 1.829219e-59 | -8.615850e-47 |
| Msa0524960 | Msa1369180 | 0.825773 | 3.904199e-54 | -8.615850e-47 |
| Msa0524960 | Msa1373390 | 0.842930 | 1.913590e-58 | -8.615850e-47 |
| Msa0524960 | Msa1374850 | 0.805288 | 1.435110e-49 | -8.615850e-47 |
| Msa0524960 | Msa1375780 | 0.850082 | 2.137100e-60 | -8.615850e-47 |
| Msa0524960 | Msa1379270 | 0.805387 | 1.368336e-49 | -8.615850e-47 |
| Msa0524960 | Msa1380720 | 0.845618 | 3.629020e-59 | -8.615850e-47 |
| Msa0524960 | Msa1387520 | 0.819859 | 9.310043e-53 | -8.615850e-47 |
| Msa0524960 | Msa1388610 | 0.830773 | 2.431578e-55 | -8.615850e-47 |
| Msa0524960 | Msa1390330 | 0.809478 | 1.854970e-50 | -8.615850e-47 |
| Msa0524960 | Msa1391430 | 0.805733 | 1.157514e-49 | -8.615850e-47 |
| Msa0524960 | Msa1394900 | 0.834151 | 3.537766e-56 | -8.615850e-47 |
| Msa0524960 | Msa1395580 | 0.815488 | 9.009352e-52 | -8.615850e-47 |
| Msa0524960 | Msa1395720 | -0.806878 | 6.640817e-50 | -8.615850e-47 |
| Msa0524960 | Msa1400830 | 0.809633 | 1.718168e-50 | -8.615850e-47 |
| Msa0524960 | Msa1403820 | 0.803765 | 2.981516e-49 | -8.615850e-47 |
| Msa0524960 | Msa1404690 | 0.824914 | 6.234221e-54 | -8.615850e-47 |
| Msa0524960 | Msa1405380 | 0.813438 | 2.559644e-51 | -8.615850e-47 |
| Msa0524960 | Msa1411390 | 0.823828 | 1.122616e-53 | -8.615850e-47 |
| Msa0524960 | Msa1413360 | 0.808966 | 2.388681e-50 | -8.615850e-47 |
| Msa0524960 | Msa1422500 | 0.807490 | 4.927205e-50 | -8.615850e-47 |
| Msa0524960 | Msa1423190 | 0.841261 | 5.290529e-58 | -8.615850e-47 |
| Msa0524960 | Msa1423230 | 0.807746 | 4.347194e-50 | -8.615850e-47 |
| Msa0524960 | Msa1430630 | 0.808479 | 3.034595e-50 | -8.615850e-47 |
| Msa0524960 | Msa1434660 | 0.804338 | 2.265982e-49 | -8.615850e-47 |
| Msa0524960 | Msa1439800 | 0.822256 | 2.610777e-53 | -8.615850e-47 |
| Msa0524960 | Msa1439880 | 0.821912 | 3.136798e-53 | -8.615850e-47 |
| Msa0524960 | Msa1449320 | 0.812859 | 3.430148e-51 | -8.615850e-47 |
| Msa0524960 | Msa1451480 | 0.810204 | 1.294987e-50 | -8.615850e-47 |
| Msa0524960 | Msa1452560 | 0.803574 | 3.267623e-49 | -8.615850e-47 |
| Msa0524960 | Msa1453540 | 0.814929 | 1.199157e-51 | -8.615850e-47 |
| Msa0524960 | Msa1456390 | 0.802846 | 4.621992e-49 | -8.615850e-47 |
| Msa0524960 | Msa1458330 | 0.806129 | 9.554855e-50 | -8.615850e-47 |
| Msa0524960 | Msa1459540 | 0.814500 | 1.493108e-51 | -8.615850e-47 |
| Msa0524960 | Msa1462600 | 0.829414 | 5.217116e-55 | -8.615850e-47 |
| Msa0524960 | Msa1466130 | -0.808285 | 3.339086e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524960 | MtrunA17_Chr3g0137971 | 94.545 | 330 | 12 | 1 | 1 | 324 | 1 | 330 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524960 | AT5G11270.1 | 48.659 | 261 | 125 | 1 | 66 | 317 | 91 | 351 | 1.34e-66 | 213 |
Find 62 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCTCCGGGCGTAGTTTC+AGG | 0.263805 | 3_4:+78503647 | None:intergenic |
| GGTGATACTGCTGATGGTTT+AGG | 0.275225 | 3_4:+78503668 | None:intergenic |
| GTACTGCTGATGGTGATTAT+TGG | 0.329819 | 3_4:-78502205 | Msa0524960:three_prime_UTR |
| CACCAGCCTTGATCACGCTT+GGG | 0.331948 | 3_4:-78502252 | Msa0524960:three_prime_UTR |
| TTCTCGAAAGAGATTGAAAA+AGG | 0.338696 | 3_4:-78503531 | Msa0524960:CDS |
| GATCATGCTCATGCAGAATC+TGG | 0.343580 | 3_4:-78503602 | Msa0524960:CDS |
| GCTTGGGGTTGAGTTATATA+AGG | 0.343854 | 3_4:-78502236 | Msa0524960:three_prime_UTR |
| TTCCTCTGACTGTGACTAAA+CGG | 0.395790 | 3_4:+78505373 | None:intergenic |
| TTCGCTGCAAAGAAGAGGAT+TGG | 0.420945 | 3_4:+78505349 | None:intergenic |
| AAAATGAATACGAGAACATT+TGG | 0.422236 | 3_4:+78502123 | None:intergenic |
| GCTGATGGTTTAGGTTCATC+AGG | 0.425177 | 3_4:+78503677 | None:intergenic |
| TTCATGACATGCAACAGAAT+TGG | 0.427701 | 3_4:-78503556 | Msa0524960:CDS |
| CTCAACCCCAAGCGTGATCA+AGG | 0.446457 | 3_4:+78502246 | None:intergenic |
| TCACCAGCCTTGATCACGCT+TGG | 0.449052 | 3_4:-78502253 | Msa0524960:three_prime_UTR |
| CGCGGAGAACAGTTATTAAG+TGG | 0.452000 | 3_4:-78502431 | Msa0524960:CDS |
| TCGCTGCAAAGAAGAGGATT+GGG | 0.456309 | 3_4:+78505350 | None:intergenic |
| TTCTGTTGCATGTCATGAAT+AGG | 0.457484 | 3_4:+78503560 | None:intergenic |
| TTGGCTAGAGCATTGAAAAC+TGG | 0.460688 | 3_4:-78504798 | Msa0524960:CDS |
| ATAGGTAAGTTAGACTTCTT+CGG | 0.466152 | 3_4:+78503578 | None:intergenic |
| TCCTCTGACTGTGACTAAAC+GGG | 0.466238 | 3_4:+78505374 | None:intergenic |
| CGTGAGTTGGAAGGTGTGTT+GGG | 0.479759 | 3_4:-78504945 | Msa0524960:CDS |
| TCATTAGCAGACTGCTGGTA+AGG | 0.483094 | 3_4:+78502363 | None:intergenic |
| TTGTTTCATTAGCAGACTGC+TGG | 0.483884 | 3_4:+78502358 | None:intergenic |
| TGTTTGAAAAGCAACTCAAA+TGG | 0.492775 | 3_4:+78505062 | None:intergenic |
| ATTCGCTGAAGCTTAGAACT+TGG | 0.492933 | 3_4:-78504833 | Msa0524960:CDS |
| AAAGGCTTACACTTAGTTTG+CGG | 0.505407 | 3_4:+78504772 | None:intergenic |
| ACCCCAAGCGTGATCAAGGC+TGG | 0.508368 | 3_4:+78502250 | None:intergenic |
| TGCTTTGTTAGAACGTGAGT+TGG | 0.513640 | 3_4:-78504958 | Msa0524960:CDS |
| CTCAGCATCAGAAGACTTGG+TGG | 0.517452 | 3_4:+78503710 | None:intergenic |
| AGCTCTATCAAGACAGAGCT+CGG | 0.525713 | 3_4:+78503760 | None:intergenic |
| AGAGCGAGAAGGAAGAGTGA+AGG | 0.528288 | 3_4:+78505311 | None:intergenic |
| ACGTGAGTTGGAAGGTGTGT+TGG | 0.531369 | 3_4:-78504946 | Msa0524960:CDS |
| AGAGTGAAGGAGAAGAGAAG+AGG | 0.540225 | 3_4:+78505324 | None:intergenic |
| AGACAAACGTGCCGAGGAGG+GGG | 0.542683 | 3_4:-78502403 | Msa0524960:CDS |
| ACCAGCCTTGATCACGCTTG+GGG | 0.548676 | 3_4:-78502251 | Msa0524960:three_prime_UTR |
| GTTTCAGGTGATACTGCTGA+TGG | 0.555775 | 3_4:+78503662 | None:intergenic |
| AGGCTCAGCATCAGAAGACT+TGG | 0.557597 | 3_4:+78503707 | None:intergenic |
| CGGTGACAATTGAAGAGTAG+AGG | 0.560168 | 3_4:+78505283 | None:intergenic |
| TGGTAAGGAAGACGATGCTC+TGG | 0.560826 | 3_4:+78502378 | None:intergenic |
| AAATTGACTCATGTTACAGA+GGG | 0.567201 | 3_4:-78505101 | Msa0524960:CDS |
| AACTTGGCAATTGAATACAT+TGG | 0.575518 | 3_4:-78504817 | Msa0524960:CDS |
| AGCATCAGAAGACTTGGTGG+AGG | 0.576518 | 3_4:+78503713 | None:intergenic |
| TAGGTTCATCAGGAATCGAT+AGG | 0.584575 | 3_4:+78503687 | None:intergenic |
| GTATCACCTGAAACTACGCC+CGG | 0.589871 | 3_4:-78503653 | Msa0524960:CDS |
| GAAGACAAACGTGCCGAGGA+GGG | 0.595141 | 3_4:-78502405 | Msa0524960:CDS |
| AAAGGCTCAACTTGACACGC+TGG | 0.611700 | 3_4:-78503513 | Msa0524960:CDS |
| TTGTTAGAACGTGAGTTGGA+AGG | 0.619119 | 3_4:-78504954 | Msa0524960:CDS |
| TGAAGACAAACGTGCCGAGG+AGG | 0.619168 | 3_4:-78502406 | Msa0524960:CDS |
| AAGACAAACGTGCCGAGGAG+GGG | 0.620622 | 3_4:-78502404 | Msa0524960:CDS |
| TGCATGTTTCAAACATTCCG+CGG | 0.630435 | 3_4:-78502449 | Msa0524960:CDS |
| ACCCGTTTAGTCACAGTCAG+AGG | 0.634786 | 3_4:-78505375 | Msa0524960:CDS |
| GGAAGTTGAAGTACTGCTGA+TGG | 0.635299 | 3_4:-78502215 | Msa0524960:three_prime_UTR |
| AAAATTGACTCATGTTACAG+AGG | 0.638213 | 3_4:-78505102 | Msa0524960:CDS |
| GCATCAGAAGACTTGGTGGA+GGG | 0.649310 | 3_4:+78503714 | None:intergenic |
| GTTTGAAGACAAACGTGCCG+AGG | 0.651860 | 3_4:-78502409 | Msa0524960:CDS |
| TGATAAACACTGATTCGCGA+CGG | 0.673675 | 3_4:+78505401 | None:intergenic |
| TGTTACAGAGGGGAATGACG+AGG | 0.686418 | 3_4:-78505090 | Msa0524960:CDS |
| TACAGAGGGGAATGACGAGG+AGG | 0.700089 | 3_4:-78505087 | Msa0524960:CDS |
| ACAGATATCAGCGAAACACA+AGG | 0.708447 | 3_4:-78504897 | Msa0524960:CDS |
| CACTTAATAACTGTTCTCCG+CGG | 0.713242 | 3_4:+78502432 | None:intergenic |
| GAGTTTACATGAGATCAAAG+CGG | 0.731573 | 3_4:-78503487 | Msa0524960:CDS |
| AATTGACTCATGTTACAGAG+GGG | 0.739510 | 3_4:-78505100 | Msa0524960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGCATAGAATAATAAATT+AGG | + | chr3_4:78502357-78502376 | None:intergenic | 15.0% |
| !! | CTAAAAATACAAAATTCAAA+AGG | + | chr3_4:78502751-78502770 | None:intergenic | 15.0% |
| !! | AATTAAACTCAAAACAAATT+AGG | + | chr3_4:78502774-78502793 | None:intergenic | 15.0% |
| !! | AATTTAATAGTGAGATTTAT+TGG | + | chr3_4:78504738-78504757 | None:intergenic | 15.0% |
| !! | TTCCAAAAAGAAAAACAATA+AGG | - | chr3_4:78502246-78502265 | Msa0524960:three_prime_UTR | 20.0% |
| !!! | AACCTTATTGTTTTTCTTTT+TGG | + | chr3_4:78502251-78502270 | None:intergenic | 20.0% |
| !! | TATGAATCATTGAATTGTAT+TGG | + | chr3_4:78502323-78502342 | None:intergenic | 20.0% |
| !! | TTAATTCATATATACAACGT+TGG | + | chr3_4:78502855-78502874 | None:intergenic | 20.0% |
| !! | GAATAAAAAGATTAAGCAAA+TGG | + | chr3_4:78503109-78503128 | None:intergenic | 20.0% |
| !! | TTTATATTAAGAATCTCAGA+TGG | - | chr3_4:78503513-78503532 | Msa0524960:CDS | 20.0% |
| !! | TTCTTTATAAAAAGAATCTC+CGG | + | chr3_4:78503871-78503890 | None:intergenic | 20.0% |
| !!! | AAGATTTTACTAGTTATGTA+TGG | + | chr3_4:78504158-78504177 | None:intergenic | 20.0% |
| !! | ACATTTGATATATTTAGCAT+CGG | - | chr3_4:78504544-78504563 | Msa0524960:intron | 20.0% |
| !!! | TTTTTGAGGAATTTGATAAT+TGG | + | chr3_4:78505336-78505355 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTCTTTTTGGAAG+AGG | + | chr3_4:78502245-78502264 | None:intergenic | 25.0% |
| ! | AATTGTATTGGATTTGGATT+TGG | + | chr3_4:78502311-78502330 | None:intergenic | 25.0% |
| ! | TCATTGAATTGTATTGGATT+TGG | + | chr3_4:78502317-78502336 | None:intergenic | 25.0% |
| ! | AATGATGTAGAAAAAAGTAG+TGG | - | chr3_4:78502632-78502651 | Msa0524960:intron | 25.0% |
| ! | ATATATACAACGTTGGTATT+TGG | + | chr3_4:78502848-78502867 | None:intergenic | 25.0% |
| ! | ATGATATGAATAGGATTACT+TGG | - | chr3_4:78502952-78502971 | Msa0524960:intron | 25.0% |
| ! | AATGTTAGTAGTTAGTTAGT+TGG | - | chr3_4:78503240-78503259 | Msa0524960:intron | 25.0% |
| ! | TAGTATATTTGCCTTTAATC+AGG | + | chr3_4:78503409-78503428 | None:intergenic | 25.0% |
| !! | CTAGTTGATATATTAAAGAG+TGG | - | chr3_4:78503426-78503445 | Msa0524960:intron | 25.0% |
| ! | TCTTTATAAAAAGAATCTCC+GGG | + | chr3_4:78503870-78503889 | None:intergenic | 25.0% |
| ! | AAACTTGTGATATTGAAGTA+TGG | + | chr3_4:78504061-78504080 | None:intergenic | 25.0% |
| !! | CTTCAATATCACAAGTTTTA+TGG | - | chr3_4:78504063-78504082 | Msa0524960:intron | 25.0% |
| ! | AAACTTGTGATATTGAAGTA+TGG | + | chr3_4:78504061-78504080 | None:intergenic | 25.0% |
| !! | CTTCAATATCACAAGTTTTA+TGG | - | chr3_4:78504063-78504082 | Msa0524960:intron | 25.0% |
| ! | ACATAACTTCTGATTTAAGA+GGG | + | chr3_4:78504245-78504264 | None:intergenic | 25.0% |
| ! | AACATAACTTCTGATTTAAG+AGG | + | chr3_4:78504246-78504265 | None:intergenic | 25.0% |
| !! | GTGACTTTTTAATCTAATGA+TGG | - | chr3_4:78504772-78504791 | Msa0524960:intron | 25.0% |
| ! | AATAGAATATATGCACAAAG+AGG | + | chr3_4:78504851-78504870 | None:intergenic | 25.0% |
| ! | AGTTAACAAGTTGTGAAATA+AGG | + | chr3_4:78504973-78504992 | None:intergenic | 25.0% |
| !! | TTTGGTATTTGACATTTTAG+CGG | + | chr3_4:78505364-78505383 | None:intergenic | 25.0% |
| ! | AAAATGAATACGAGAACATT+TGG | + | chr3_4:78505382-78505401 | None:intergenic | 25.0% |
| ! | TTTGGATTTGGATTTGGAAT+TGG | + | chr3_4:78502299-78502318 | None:intergenic | 30.0% |
| ATTGGATTTGGATTTGGATT+TGG | + | chr3_4:78502305-78502324 | None:intergenic | 30.0% | |
| ! | AAAATTGACTCATGTTACAG+AGG | - | chr3_4:78502400-78502419 | Msa0524960:CDS | 30.0% |
| ! | AAATTGACTCATGTTACAGA+GGG | - | chr3_4:78502401-78502420 | Msa0524960:CDS | 30.0% |
| TGTTTGAAAAGCAACTCAAA+TGG | + | chr3_4:78502443-78502462 | None:intergenic | 30.0% | |
| AACTTGGCAATTGAATACAT+TGG | - | chr3_4:78502685-78502704 | Msa0524960:intron | 30.0% | |
| GTGTATCAGATGATATGAAT+AGG | - | chr3_4:78502943-78502962 | Msa0524960:intron | 30.0% | |
| ATCATACAGGTATTTCATGT+AGG | + | chr3_4:78503014-78503033 | None:intergenic | 30.0% | |
| AAATGCAGATCATATCATAC+AGG | + | chr3_4:78503027-78503046 | None:intergenic | 30.0% | |
| TCTTAAACACTTGTCTTGTA+TGG | + | chr3_4:78503058-78503077 | None:intergenic | 30.0% | |
| TTAAGAAACCAAAATGCTTG+TGG | - | chr3_4:78503072-78503091 | Msa0524960:intron | 30.0% | |
| CCTTATCAATGAATGACAAA+AGG | + | chr3_4:78503183-78503202 | None:intergenic | 30.0% | |
| ! | CCTTTTGTCATTCATTGATA+AGG | - | chr3_4:78503180-78503199 | Msa0524960:intron | 30.0% |
| !!! | TTACTTTTTCTTGTCCCTAA+AGG | + | chr3_4:78503360-78503379 | None:intergenic | 30.0% |
| ! | ATACATCCAAGTTGAAGTTA+AGG | + | chr3_4:78503483-78503502 | None:intergenic | 30.0% |
| TTATCTGCAACAAATTCGAA+AGG | + | chr3_4:78503710-78503729 | None:intergenic | 30.0% | |
| ATAGGTAAGTTAGACTTCTT+CGG | + | chr3_4:78503927-78503946 | None:intergenic | 30.0% | |
| TTCTCGAAAGAGATTGAAAA+AGG | - | chr3_4:78503971-78503990 | Msa0524960:intron | 30.0% | |
| ATGGCAAGTTTAACTATGTA+TGG | + | chr3_4:78504100-78504119 | None:intergenic | 30.0% | |
| TGATGCTTGTATTAGTATTC+TGG | - | chr3_4:78504284-78504303 | Msa0524960:intron | 30.0% | |
| TTAACATGTATTGCAAGTCT+TGG | + | chr3_4:78504440-78504459 | None:intergenic | 30.0% | |
| TGGACGACTTGAAAATAAAT+GGG | - | chr3_4:78504503-78504522 | Msa0524960:intron | 30.0% | |
| AAATGGGGTAAATGTCATAT+AGG | - | chr3_4:78504519-78504538 | Msa0524960:intron | 30.0% | |
| AATGGGGTAAATGTCATATA+GGG | - | chr3_4:78504520-78504539 | Msa0524960:intron | 30.0% | |
| !! | AGTGAGATTTATTGGTTCAA+TGG | + | chr3_4:78504730-78504749 | None:intergenic | 30.0% |
| AATGCTATAATATGCAGTGA+TGG | + | chr3_4:78504899-78504918 | None:intergenic | 30.0% | |
| !!! | TTTTAGCGGACTATTTTTTG+AGG | + | chr3_4:78505350-78505369 | None:intergenic | 30.0% |
| !! | GTTTTTCTTTTTGGAAGAGG+CGG | + | chr3_4:78502242-78502261 | None:intergenic | 35.0% |
| ! | AATTGACTCATGTTACAGAG+GGG | - | chr3_4:78502402-78502421 | Msa0524960:CDS | 35.0% |
| ! | AAAGGCTTACACTTAGTTTG+CGG | + | chr3_4:78502733-78502752 | None:intergenic | 35.0% |
| TCATCTGATACACTTAGTTG+TGG | + | chr3_4:78502936-78502955 | None:intergenic | 35.0% | |
| ! | TACTTGGTTTGAGTATGAAG+AGG | - | chr3_4:78502968-78502987 | Msa0524960:intron | 35.0% |
| ! | ACTGTTTTCCACAAGCATTT+TGG | + | chr3_4:78503083-78503102 | None:intergenic | 35.0% |
| GTCATTCATTGATAAGGAGA+AGG | - | chr3_4:78503186-78503205 | Msa0524960:intron | 35.0% | |
| AGGAGAAGGAAAAAGTAAAC+TGG | - | chr3_4:78503200-78503219 | Msa0524960:intron | 35.0% | |
| TAGTAGTTAGTTAGTTGGTC+AGG | - | chr3_4:78503245-78503264 | Msa0524960:intron | 35.0% | |
| AGTAGTTAGTTAGTTGGTCA+GGG | - | chr3_4:78503246-78503265 | Msa0524960:intron | 35.0% | |
| GGTGTTTGCAAGCAAATTAA+CGG | + | chr3_4:78503462-78503481 | None:intergenic | 35.0% | |
| CAAACACCTTAACTTCAACT+TGG | - | chr3_4:78503474-78503493 | Msa0524960:intron | 35.0% | |
| CAATCCCTAATGTTAACTTC+CGG | - | chr3_4:78503666-78503685 | Msa0524960:CDS | 35.0% | |
| TTCTGTTGCATGTCATGAAT+AGG | + | chr3_4:78503945-78503964 | None:intergenic | 35.0% | |
| TTCATGACATGCAACAGAAT+TGG | - | chr3_4:78503946-78503965 | Msa0524960:intron | 35.0% | |
| GAGTTTACATGAGATCAAAG+CGG | - | chr3_4:78504015-78504034 | Msa0524960:intron | 35.0% | |
| ! | TGGCAAGTTTAACTTACAGT+GGG | + | chr3_4:78504041-78504060 | None:intergenic | 35.0% |
| ! | ATGGCAAGTTTAACTTACAG+TGG | + | chr3_4:78504042-78504061 | None:intergenic | 35.0% |
| !! | TACACTCCATTTTTCTAGTC+CGG | - | chr3_4:78504211-78504230 | Msa0524960:intron | 35.0% |
| GCATACATGATGATACAACT+GGG | + | chr3_4:78504333-78504352 | None:intergenic | 35.0% | |
| AGCATACATGATGATACAAC+TGG | + | chr3_4:78504334-78504353 | None:intergenic | 35.0% | |
| GTGGACGACTTGAAAATAAA+TGG | - | chr3_4:78504502-78504521 | Msa0524960:intron | 35.0% | |
| GGACGACTTGAAAATAAATG+GGG | - | chr3_4:78504504-78504523 | Msa0524960:intron | 35.0% | |
| ATGGGGTAAATGTCATATAG+GGG | - | chr3_4:78504521-78504540 | Msa0524960:intron | 35.0% | |
| ! | CAAAGAAGCATATAAGGTGA+TGG | + | chr3_4:78504645-78504664 | None:intergenic | 35.0% |
| ACCTTATATGCTTCTTTGTG+CGG | - | chr3_4:78504647-78504666 | Msa0524960:intron | 35.0% | |
| !! | GAGATTTATTGGTTCAATGG+TGG | + | chr3_4:78504727-78504746 | None:intergenic | 35.0% |
| !! | TGATAAACACTGATTCGCGA+CGG | + | chr3_4:78502104-78502123 | None:intergenic | 40.0% |
| TTCCTCTGACTGTGACTAAA+CGG | + | chr3_4:78502132-78502151 | None:intergenic | 40.0% | |
| ! | TGCTTTGTTAGAACGTGAGT+TGG | - | chr3_4:78502544-78502563 | Msa0524960:intron | 40.0% |
| ! | TTGTTAGAACGTGAGTTGGA+AGG | - | chr3_4:78502548-78502567 | Msa0524960:intron | 40.0% |
| ACAGATATCAGCGAAACACA+AGG | - | chr3_4:78502605-78502624 | Msa0524960:intron | 40.0% | |
| GTAGAAAAAAGTAGTGGCGA+TGG | - | chr3_4:78502638-78502657 | Msa0524960:intron | 40.0% | |
| ATTCGCTGAAGCTTAGAACT+TGG | - | chr3_4:78502669-78502688 | Msa0524960:intron | 40.0% | |
| !! | TTGGCTAGAGCATTGAAAAC+TGG | - | chr3_4:78502704-78502723 | Msa0524960:intron | 40.0% |
| !! | TCTGATTTGCTTCCTTGACT+TGG | - | chr3_4:78503157-78503176 | Msa0524960:intron | 40.0% |
| AATGACAAAAGGCCAAGTCA+AGG | + | chr3_4:78503172-78503191 | None:intergenic | 40.0% | |
| GGAAAACAGGAAATGCTAGT+AGG | - | chr3_4:78503267-78503286 | Msa0524960:intron | 40.0% | |
| AAACAGGAAATGCTAGTAGG+AGG | - | chr3_4:78503270-78503289 | Msa0524960:intron | 40.0% | |
| AACAGGAAATGCTAGTAGGA+GGG | - | chr3_4:78503271-78503290 | Msa0524960:intron | 40.0% | |
| CTCCTGCTTAGAACTTCTTT+GGG | - | chr3_4:78503308-78503327 | Msa0524960:intron | 40.0% | |
| TCCTGCTTAGAACTTCTTTG+GGG | - | chr3_4:78503309-78503328 | Msa0524960:intron | 40.0% | |
| ! | AGTAGTGTAGTGGTTTGGAT+TGG | + | chr3_4:78503337-78503356 | None:intergenic | 40.0% |
| AAAGGAGTAGTGTAGTGGTT+TGG | + | chr3_4:78503342-78503361 | None:intergenic | 40.0% | |
| AACCACTACACTACTCCTTT+AGG | - | chr3_4:78503342-78503361 | Msa0524960:intron | 40.0% | |
| ACCACTACACTACTCCTTTA+GGG | - | chr3_4:78503343-78503362 | Msa0524960:intron | 40.0% | |
| GTAAACTTGATAGATCAGCC+AGG | - | chr3_4:78503376-78503395 | Msa0524960:intron | 40.0% | |
| !! | TCAGATGGATTTTCCTTGCA+AGG | - | chr3_4:78503528-78503547 | Msa0524960:CDS | 40.0% |
| !! | CAGATGGATTTTCCTTGCAA+GGG | - | chr3_4:78503529-78503548 | Msa0524960:CDS | 40.0% |
| !! | AGATGGATTTTCCTTGCAAG+GGG | - | chr3_4:78503530-78503549 | Msa0524960:CDS | 40.0% |
| GTTCATGTGATAAAGCGAGA+AGG | - | chr3_4:78503579-78503598 | Msa0524960:CDS | 40.0% | |
| ATAAAGCGAGAAGGAAAGAG+AGG | - | chr3_4:78503588-78503607 | Msa0524960:CDS | 40.0% | |
| TAAAGCGAGAAGGAAAGAGA+GGG | - | chr3_4:78503589-78503608 | Msa0524960:CDS | 40.0% | |
| GAGTCCGGAAGTTAACATTA+GGG | + | chr3_4:78503673-78503692 | None:intergenic | 40.0% | |
| TGAGTCCGGAAGTTAACATT+AGG | + | chr3_4:78503674-78503693 | None:intergenic | 40.0% | |
| GTGAAACTGAGAAATGAGTC+CGG | + | chr3_4:78503688-78503707 | None:intergenic | 40.0% | |
| TAGGTTCATCAGGAATCGAT+AGG | + | chr3_4:78503818-78503837 | None:intergenic | 40.0% | |
| ATTTAAGAGGGAATTGCTGC+CGG | + | chr3_4:78504233-78504252 | None:intergenic | 40.0% | |
| ! | ACGATATGACACTTAGCTTG+AGG | + | chr3_4:78504484-78504503 | None:intergenic | 40.0% |
| TCAAGCTAAGTGTCATATCG+TGG | - | chr3_4:78504483-78504502 | Msa0524960:intron | 40.0% | |
| ! | AAGGTGATGGTTGACATTGT+GGG | + | chr3_4:78504632-78504651 | None:intergenic | 40.0% |
| ! | TAAGGTGATGGTTGACATTG+TGG | + | chr3_4:78504633-78504652 | None:intergenic | 40.0% |
| TCACTTGTGCACCATAGAAT+TGG | + | chr3_4:78504673-78504692 | None:intergenic | 40.0% | |
| ! | CAAAGAGGCTTTGTCTAACA+TGG | + | chr3_4:78504836-78504855 | None:intergenic | 40.0% |
| AAAGTGACAAGCATGTGTCT+TGG | - | chr3_4:78504920-78504939 | Msa0524960:CDS | 40.0% | |
| TAGTTCAAGACAGACAGGTA+AGG | + | chr3_4:78505003-78505022 | None:intergenic | 40.0% | |
| CATTGTAGTTCAAGACAGAC+AGG | + | chr3_4:78505008-78505027 | None:intergenic | 40.0% | |
| TGCATGTTTCAAACATTCCG+CGG | - | chr3_4:78505053-78505072 | Msa0524960:CDS | 40.0% | |
| CACTTAATAACTGTTCTCCG+CGG | + | chr3_4:78505073-78505092 | None:intergenic | 40.0% | |
| TTGTTTCATTAGCAGACTGC+TGG | + | chr3_4:78505147-78505166 | None:intergenic | 40.0% | |
| GCTTGGGGTTGAGTTATATA+AGG | - | chr3_4:78505266-78505285 | Msa0524960:CDS | 40.0% | |
| ! | GTACTGCTGATGGTGATTAT+TGG | - | chr3_4:78505297-78505316 | Msa0524960:CDS | 40.0% |
| TCCTCTGACTGTGACTAAAC+GGG | + | chr3_4:78502131-78502150 | None:intergenic | 45.0% | |
| TCGCTGCAAAGAAGAGGATT+GGG | + | chr3_4:78502155-78502174 | None:intergenic | 45.0% | |
| TTCGCTGCAAAGAAGAGGAT+TGG | + | chr3_4:78502156-78502175 | None:intergenic | 45.0% | |
| ! | AGGTTTTCGCTGCAAAGAAG+AGG | + | chr3_4:78502161-78502180 | None:intergenic | 45.0% |
| AGAGTGAAGGAGAAGAGAAG+AGG | + | chr3_4:78502181-78502200 | None:intergenic | 45.0% | |
| !!! | TAGAGGTTTTGAGAGCGAGA+AGG | + | chr3_4:78502205-78502224 | None:intergenic | 45.0% |
| CGGTGACAATTGAAGAGTAG+AGG | + | chr3_4:78502222-78502241 | None:intergenic | 45.0% | |
| GTTAGTTGGTCAGGGAAAAC+AGG | - | chr3_4:78503254-78503273 | Msa0524960:intron | 45.0% | |
| !! | AGTTCTAAGCAGGAGGTCTA+GGG | + | chr3_4:78503303-78503322 | None:intergenic | 45.0% |
| !! | AAGTTCTAAGCAGGAGGTCT+AGG | + | chr3_4:78503304-78503323 | None:intergenic | 45.0% |
| !! | CCAAAGAAGTTCTAAGCAGG+AGG | + | chr3_4:78503310-78503329 | None:intergenic | 45.0% |
| CCTCCTGCTTAGAACTTCTT+TGG | - | chr3_4:78503307-78503326 | Msa0524960:intron | 45.0% | |
| !! | ACCCCAAAGAAGTTCTAAGC+AGG | + | chr3_4:78503313-78503332 | None:intergenic | 45.0% |
| TCCCTAAAGGAGTAGTGTAG+TGG | + | chr3_4:78503347-78503366 | None:intergenic | 45.0% | |
| ACTTGATAGATCAGCCAGGT+TGG | - | chr3_4:78503380-78503399 | Msa0524960:intron | 45.0% | |
| CTTGATAGATCAGCCAGGTT+GGG | - | chr3_4:78503381-78503400 | Msa0524960:intron | 45.0% | |
| TTGATAGATCAGCCAGGTTG+GGG | - | chr3_4:78503382-78503401 | Msa0524960:intron | 45.0% | |
| ATTGAGCAGACAACTAGCAC+AGG | + | chr3_4:78503650-78503669 | None:intergenic | 45.0% | |
| AGCTCTATCAAGACAGAGCT+CGG | + | chr3_4:78503745-78503764 | None:intergenic | 45.0% | |
| ! | GCTGATGGTTTAGGTTCATC+AGG | + | chr3_4:78503828-78503847 | None:intergenic | 45.0% |
| GGTGATACTGCTGATGGTTT+AGG | + | chr3_4:78503837-78503856 | None:intergenic | 45.0% | |
| ! | GTTTCAGGTGATACTGCTGA+TGG | + | chr3_4:78503843-78503862 | None:intergenic | 45.0% |
| GATCATGCTCATGCAGAATC+TGG | - | chr3_4:78503900-78503919 | Msa0524960:intron | 45.0% | |
| ! | TTGCTGCCGGACTAGAAAAA+TGG | + | chr3_4:78504220-78504239 | None:intergenic | 45.0% |
| ! | GCCGCACAAAGAAGCATATA+AGG | + | chr3_4:78504651-78504670 | None:intergenic | 45.0% |
| TCTTTGTGCGGCCAATTCTA+TGG | - | chr3_4:78504659-78504678 | Msa0524960:intron | 45.0% | |
| CGCGGAGAACAGTTATTAAG+TGG | - | chr3_4:78505071-78505090 | Msa0524960:CDS | 45.0% | |
| TCATTAGCAGACTGCTGGTA+AGG | + | chr3_4:78505142-78505161 | None:intergenic | 45.0% | |
| !! | GGAAGTTGAAGTACTGCTGA+TGG | - | chr3_4:78505287-78505306 | Msa0524960:CDS | 45.0% |
| ACCCGTTTAGTCACAGTCAG+AGG | - | chr3_4:78502127-78502146 | Msa0524960:three_prime_UTR | 50.0% | |
| AGAGCGAGAAGGAAGAGTGA+AGG | + | chr3_4:78502194-78502213 | None:intergenic | 50.0% | |
| TGTTACAGAGGGGAATGACG+AGG | - | chr3_4:78502412-78502431 | Msa0524960:CDS | 50.0% | |
| ! | ACGTGAGTTGGAAGGTGTGT+TGG | - | chr3_4:78502556-78502575 | Msa0524960:intron | 50.0% |
| ! | CGTGAGTTGGAAGGTGTGTT+GGG | - | chr3_4:78502557-78502576 | Msa0524960:intron | 50.0% |
| CTTTAATCAGGACCCCAACC+TGG | + | chr3_4:78503397-78503416 | None:intergenic | 50.0% | |
| ! | CAGGTTGGGGTCCTGATTAA+AGG | - | chr3_4:78503395-78503414 | Msa0524960:intron | 50.0% |
| TCAAACTTGCACCCCTTGCA+AGG | + | chr3_4:78503544-78503563 | None:intergenic | 50.0% | |
| ! | TGCAAGGGGTGCAAGTTTGA+AGG | - | chr3_4:78503544-78503563 | Msa0524960:CDS | 50.0% |
| !! | GCATCAGAAGACTTGGTGGA+GGG | + | chr3_4:78503791-78503810 | None:intergenic | 50.0% |
| !! | AGCATCAGAAGACTTGGTGG+AGG | + | chr3_4:78503792-78503811 | None:intergenic | 50.0% |
| CTCAGCATCAGAAGACTTGG+TGG | + | chr3_4:78503795-78503814 | None:intergenic | 50.0% | |
| AGGCTCAGCATCAGAAGACT+TGG | + | chr3_4:78503798-78503817 | None:intergenic | 50.0% | |
| GTATCACCTGAAACTACGCC+CGG | - | chr3_4:78503849-78503868 | Msa0524960:intron | 50.0% | |
| AAAGGCTCAACTTGACACGC+TGG | - | chr3_4:78503989-78504008 | Msa0524960:intron | 50.0% | |
| GTGATGGTTGACATTGTGGG+AGG | + | chr3_4:78504629-78504648 | None:intergenic | 50.0% | |
| GTTTGAAGACAAACGTGCCG+AGG | - | chr3_4:78505093-78505112 | Msa0524960:CDS | 50.0% | |
| TGGTAAGGAAGACGATGCTC+TGG | + | chr3_4:78505127-78505146 | None:intergenic | 50.0% | |
| TACAGAGGGGAATGACGAGG+AGG | - | chr3_4:78502415-78502434 | Msa0524960:CDS | 55.0% | |
| GAATCTCCGGGCGTAGTTTC+AGG | + | chr3_4:78503858-78503877 | None:intergenic | 55.0% | |
| TGAAGACAAACGTGCCGAGG+AGG | - | chr3_4:78505096-78505115 | Msa0524960:CDS | 55.0% | |
| GAAGACAAACGTGCCGAGGA+GGG | - | chr3_4:78505097-78505116 | Msa0524960:CDS | 55.0% | |
| AAGACAAACGTGCCGAGGAG+GGG | - | chr3_4:78505098-78505117 | Msa0524960:CDS | 55.0% | |
| TCACCAGCCTTGATCACGCT+TGG | - | chr3_4:78505249-78505268 | Msa0524960:intron | 55.0% | |
| CACCAGCCTTGATCACGCTT+GGG | - | chr3_4:78505250-78505269 | Msa0524960:intron | 55.0% | |
| ACCAGCCTTGATCACGCTTG+GGG | - | chr3_4:78505251-78505270 | Msa0524960:intron | 55.0% | |
| CTCAACCCCAAGCGTGATCA+AGG | + | chr3_4:78505259-78505278 | None:intergenic | 55.0% | |
| AGACAAACGTGCCGAGGAGG+GGG | - | chr3_4:78505099-78505118 | Msa0524960:CDS | 60.0% | |
| !! | ATGCTCTGGAACCCCCTCCT+CGG | + | chr3_4:78505113-78505132 | None:intergenic | 60.0% |
| ACCCCAAGCGTGATCAAGGC+TGG | + | chr3_4:78505255-78505274 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 78502097 | 78505427 | 78502097 | ID=Msa0524960;Name=Msa0524960 |
| chr3_4 | mRNA | 78502097 | 78505427 | 78502097 | ID=Msa0524960-mRNA-1;Parent=Msa0524960;Name=Msa0524960-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0.75|1|1|1|4|256|324 |
| chr3_4 | exon | 78502097 | 78502493 | 78502097 | ID=Msa0524960-mRNA-1:exon:23309;Parent=Msa0524960-mRNA-1 |
| chr3_4 | exon | 78503481 | 78503798 | 78503481 | ID=Msa0524960-mRNA-1:exon:23308;Parent=Msa0524960-mRNA-1 |
| chr3_4 | exon | 78504782 | 78505126 | 78504782 | ID=Msa0524960-mRNA-1:exon:23307;Parent=Msa0524960-mRNA-1 |
| chr3_4 | exon | 78505257 | 78505427 | 78505257 | ID=Msa0524960-mRNA-1:exon:23306;Parent=Msa0524960-mRNA-1 |
| chr3_4 | CDS | 78505257 | 78505427 | 78505257 | ID=Msa0524960-mRNA-1:cds;Parent=Msa0524960-mRNA-1 |
| chr3_4 | CDS | 78504782 | 78505126 | 78504782 | ID=Msa0524960-mRNA-1:cds;Parent=Msa0524960-mRNA-1 |
| chr3_4 | CDS | 78503481 | 78503798 | 78503481 | ID=Msa0524960-mRNA-1:cds;Parent=Msa0524960-mRNA-1 |
| chr3_4 | CDS | 78502353 | 78502493 | 78502353 | ID=Msa0524960-mRNA-1:cds;Parent=Msa0524960-mRNA-1 |
| chr3_4 | three_prime_UTR | 78502097 | 78502352 | 78502097 | ID=Msa0524960-mRNA-1:three_prime_utr;Parent=Msa0524960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
