Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480430 | XP_003603420.1 | 93.333 | 330 | 11 | 2 | 1 | 319 | 1 | 330 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480430 | sp|Q8H0V5|OCP3_ARATH | 48.659 | 261 | 125 | 1 | 61 | 312 | 91 | 351 | 8.88e-66 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480430 | G7JB43 | 93.333 | 330 | 11 | 2 | 1 | 319 | 1 | 330 | 0.0 | 618 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0480430 | TF | HB-other |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012380 | Msa0480430 | 0.831568 | 1.550403e-55 | -8.615850e-47 |
| Msa0017130 | Msa0480430 | 0.810911 | 9.108548e-51 | -8.615850e-47 |
| Msa0024900 | Msa0480430 | 0.809824 | 1.563166e-50 | -8.615850e-47 |
| Msa0027030 | Msa0480430 | 0.816864 | 4.438231e-52 | -8.615850e-47 |
| Msa0036550 | Msa0480430 | -0.815533 | 8.803595e-52 | -8.615850e-47 |
| Msa0037270 | Msa0480430 | 0.812541 | 4.025014e-51 | -8.615850e-47 |
| Msa0037300 | Msa0480430 | 0.822667 | 2.095966e-53 | -8.615850e-47 |
| Msa0039020 | Msa0480430 | 0.812553 | 4.002112e-51 | -8.615850e-47 |
| Msa0039550 | Msa0480430 | 0.803938 | 2.744515e-49 | -8.615850e-47 |
| Msa0042210 | Msa0480430 | 0.822760 | 1.993212e-53 | -8.615850e-47 |
| Msa0046050 | Msa0480430 | 0.842709 | 2.191218e-58 | -8.615850e-47 |
| Msa0046800 | Msa0480430 | 0.816217 | 6.195940e-52 | -8.615850e-47 |
| Msa0052550 | Msa0480430 | 0.832269 | 1.040736e-55 | -8.615850e-47 |
| Msa0053210 | Msa0480430 | 0.859370 | 4.335854e-63 | -8.615850e-47 |
| Msa0057340 | Msa0480430 | 0.807114 | 5.919847e-50 | -8.615850e-47 |
| Msa0061060 | Msa0480430 | 0.836142 | 1.113053e-56 | -8.615850e-47 |
| Msa0065520 | Msa0480430 | 0.810395 | 1.177522e-50 | -8.615850e-47 |
| Msa0066860 | Msa0480430 | 0.821218 | 4.537458e-53 | -8.615850e-47 |
| Msa0066990 | Msa0480430 | 0.802223 | 6.211330e-49 | -8.615850e-47 |
| Msa0069540 | Msa0480430 | 0.806104 | 9.672214e-50 | -8.615850e-47 |
| Msa0081120 | Msa0480430 | 0.822182 | 2.715698e-53 | -8.615850e-47 |
| Msa0081790 | Msa0480430 | 0.812110 | 4.998228e-51 | -8.615850e-47 |
| Msa0085470 | Msa0480430 | 0.807280 | 5.458953e-50 | -8.615850e-47 |
| Msa0089510 | Msa0480430 | 0.864749 | 9.718544e-65 | -8.615850e-47 |
| Msa0089520 | Msa0480430 | 0.866337 | 3.068603e-65 | -8.615850e-47 |
| Msa0098550 | Msa0480430 | 0.849243 | 3.664116e-60 | -8.615850e-47 |
| Msa0114700 | Msa0480430 | 0.809388 | 1.939645e-50 | -8.615850e-47 |
| Msa0120120 | Msa0480430 | 0.800405 | 1.463658e-48 | -8.615850e-47 |
| Msa0122930 | Msa0480430 | 0.800959 | 1.128552e-48 | -8.615850e-47 |
| Msa0130710 | Msa0480430 | -0.826954 | 2.042884e-54 | -8.615850e-47 |
| Msa0137010 | Msa0480430 | 0.814488 | 1.501664e-51 | -8.615850e-47 |
| Msa0140290 | Msa0480430 | 0.836088 | 1.148512e-56 | -8.615850e-47 |
| Msa0155550 | Msa0480430 | 0.815216 | 1.035588e-51 | -8.615850e-47 |
| Msa0157030 | Msa0480430 | 0.830540 | 2.772646e-55 | -8.615850e-47 |
| Msa0167150 | Msa0480430 | 0.805146 | 1.537108e-49 | -8.615850e-47 |
| Msa0171920 | Msa0480430 | 0.808831 | 2.553261e-50 | -8.615850e-47 |
| Msa0175210 | Msa0480430 | 0.833638 | 4.754683e-56 | -8.615850e-47 |
| Msa0176600 | Msa0480430 | -0.826264 | 2.984584e-54 | -8.615850e-47 |
| Msa0178020 | Msa0480430 | 0.824775 | 6.723495e-54 | -8.615850e-47 |
| Msa0178940 | Msa0480430 | 0.801283 | 9.686122e-49 | -8.615850e-47 |
| Msa0179830 | Msa0480430 | -0.814894 | 1.221107e-51 | -8.615850e-47 |
| Msa0191180 | Msa0480430 | 0.813273 | 2.782503e-51 | -8.615850e-47 |
| Msa0199740 | Msa0480430 | 0.812877 | 3.398692e-51 | -8.615850e-47 |
| Msa0216390 | Msa0480430 | 0.837992 | 3.745818e-57 | -8.615850e-47 |
| Msa0216790 | Msa0480430 | 0.800637 | 1.312637e-48 | -8.615850e-47 |
| Msa0224180 | Msa0480430 | 0.801517 | 8.672881e-49 | -8.615850e-47 |
| Msa0233200 | Msa0480430 | 0.874646 | 5.738561e-68 | -8.615850e-47 |
| Msa0369100 | Msa0480430 | 0.810052 | 1.396520e-50 | -8.615850e-47 |
| Msa0373220 | Msa0480430 | 0.838669 | 2.507023e-57 | -8.615850e-47 |
| Msa0375570 | Msa0480430 | 0.807727 | 4.387663e-50 | -8.615850e-47 |
| Msa0376480 | Msa0480430 | 0.818891 | 1.546718e-52 | -8.615850e-47 |
| Msa0388200 | Msa0480430 | 0.808273 | 3.358664e-50 | -8.615850e-47 |
| Msa0390760 | Msa0480430 | 0.801121 | 1.045655e-48 | -8.615850e-47 |
| Msa0392050 | Msa0480430 | 0.807727 | 4.389732e-50 | -8.615850e-47 |
| Msa0392540 | Msa0480430 | 0.838798 | 2.320831e-57 | -8.615850e-47 |
| Msa0393880 | Msa0480430 | 0.861901 | 7.406631e-64 | -8.615850e-47 |
| Msa0400060 | Msa0480430 | -0.806079 | 9.790998e-50 | -8.615850e-47 |
| Msa0404070 | Msa0480430 | 0.864453 | 1.202481e-64 | -8.615850e-47 |
| Msa0412470 | Msa0480430 | 0.813991 | 1.933989e-51 | -8.615850e-47 |
| Msa0419040 | Msa0480430 | 0.818527 | 1.871183e-52 | -8.615850e-47 |
| Msa0421720 | Msa0480430 | 0.802637 | 5.104816e-49 | -8.615850e-47 |
| Msa0424220 | Msa0480430 | 0.818075 | 2.368821e-52 | -8.615850e-47 |
| Msa0428280 | Msa0480430 | 0.822415 | 2.397938e-53 | -8.615850e-47 |
| Msa0430020 | Msa0480430 | 0.810806 | 9.595288e-51 | -8.615850e-47 |
| Msa0430040 | Msa0480430 | 0.815003 | 1.154643e-51 | -8.615850e-47 |
| Msa0433670 | Msa0480430 | 0.816134 | 6.465766e-52 | -8.615850e-47 |
| Msa0437790 | Msa0480430 | 0.852854 | 3.511389e-61 | -8.615850e-47 |
| Msa0440310 | Msa0480430 | 0.805057 | 1.604234e-49 | -8.615850e-47 |
| Msa0440720 | Msa0480430 | 0.813214 | 2.867113e-51 | -8.615850e-47 |
| Msa0441670 | Msa0480430 | 0.866673 | 2.401247e-65 | -8.615850e-47 |
| Msa0443820 | Msa0480430 | -0.809954 | 1.465692e-50 | -8.615850e-47 |
| Msa0444340 | Msa0480430 | 0.850845 | 1.304767e-60 | -8.615850e-47 |
| Msa0460220 | Msa0480430 | 0.810964 | 8.872253e-51 | -8.615850e-47 |
| Msa0463150 | Msa0480430 | 0.816293 | 5.960391e-52 | -8.615850e-47 |
| Msa0468020 | Msa0480430 | 0.836782 | 7.647265e-57 | -8.615850e-47 |
| Msa0469950 | Msa0480430 | 0.808207 | 3.469675e-50 | -8.615850e-47 |
| Msa0471130 | Msa0480430 | 0.816470 | 5.438878e-52 | -8.615850e-47 |
| Msa0471760 | Msa0480430 | 0.816185 | 6.300316e-52 | -8.615850e-47 |
| Msa0474640 | Msa0480430 | 0.810372 | 1.191053e-50 | -8.615850e-47 |
| Msa0477550 | Msa0480430 | 0.810120 | 1.349533e-50 | -8.615850e-47 |
| Msa0480430 | Msa0481490 | 0.801885 | 7.291410e-49 | -8.615850e-47 |
| Msa0480430 | Msa0485210 | 0.800175 | 1.630625e-48 | -8.615850e-47 |
| Msa0480430 | Msa0489330 | 0.880383 | 5.742561e-70 | -8.615850e-47 |
| Msa0480430 | Msa0494750 | -0.803255 | 3.803558e-49 | -8.615850e-47 |
| Msa0480430 | Msa0503220 | -0.827376 | 1.618644e-54 | -8.615850e-47 |
| Msa0480430 | Msa0515460 | 0.814680 | 1.362075e-51 | -8.615850e-47 |
| Msa0480430 | Msa0519090 | 0.830337 | 3.109341e-55 | -8.615850e-47 |
| Msa0480430 | Msa0520550 | 0.812525 | 4.058325e-51 | -8.615850e-47 |
| Msa0480430 | Msa0521570 | 0.807550 | 4.785587e-50 | -8.615850e-47 |
| Msa0480430 | Msa0524830 | 0.916995 | 9.087648e-86 | -8.615850e-47 |
| Msa0480430 | Msa0524960 | 0.986150 | 7.773462e-166 | -8.615850e-47 |
| Msa0480430 | Msa0525270 | 0.800183 | 1.623843e-48 | -8.615850e-47 |
| Msa0480430 | Msa0544780 | 0.805719 | 1.165318e-49 | -8.615850e-47 |
| Msa0480430 | Msa0548210 | 0.814623 | 1.402275e-51 | -8.615850e-47 |
| Msa0480430 | Msa0549540 | 0.815657 | 8.263299e-52 | -8.615850e-47 |
| Msa0480430 | Msa0549760 | 0.805631 | 1.215881e-49 | -8.615850e-47 |
| Msa0480430 | Msa0552660 | 0.809225 | 2.101984e-50 | -8.615850e-47 |
| Msa0480430 | Msa0552670 | 0.818360 | 2.041732e-52 | -8.615850e-47 |
| Msa0480430 | Msa0556070 | 0.816996 | 4.146564e-52 | -8.615850e-47 |
| Msa0480430 | Msa0566090 | 0.830409 | 2.985629e-55 | -8.615850e-47 |
| Msa0480430 | Msa0574240 | 0.818122 | 2.311301e-52 | -8.615850e-47 |
| Msa0480430 | Msa0575670 | 0.826662 | 2.398894e-54 | -8.615850e-47 |
| Msa0480430 | Msa0576500 | 0.807445 | 5.037873e-50 | -8.615850e-47 |
| Msa0480430 | Msa0604880 | 0.801661 | 8.104803e-49 | -8.615850e-47 |
| Msa0480430 | Msa0605250 | 0.800207 | 1.605880e-48 | -8.615850e-47 |
| Msa0480430 | Msa0608780 | 0.801667 | 8.081317e-49 | -8.615850e-47 |
| Msa0480430 | Msa0609790 | 0.825461 | 4.628531e-54 | -8.615850e-47 |
| Msa0480430 | Msa0619350 | 0.814788 | 1.288861e-51 | -8.615850e-47 |
| Msa0480430 | Msa0619960 | 0.803448 | 3.469835e-49 | -8.615850e-47 |
| Msa0480430 | Msa0620050 | 0.827875 | 1.228394e-54 | -8.615850e-47 |
| Msa0480430 | Msa0622250 | 0.846086 | 2.709374e-59 | -8.615850e-47 |
| Msa0480430 | Msa0636720 | 0.839129 | 1.905905e-57 | -8.615850e-47 |
| Msa0480430 | Msa0644220 | 0.802832 | 4.652543e-49 | -8.615850e-47 |
| Msa0480430 | Msa0644630 | 0.857111 | 2.039350e-62 | -8.615850e-47 |
| Msa0480430 | Msa0645040 | 0.815631 | 8.375422e-52 | -8.615850e-47 |
| Msa0480430 | Msa0646190 | 0.809106 | 2.228718e-50 | -8.615850e-47 |
| Msa0480430 | Msa0647460 | 0.813334 | 2.697930e-51 | -8.615850e-47 |
| Msa0480430 | Msa0648560 | 0.811399 | 7.139353e-51 | -8.615850e-47 |
| Msa0480430 | Msa0649250 | 0.805202 | 1.495617e-49 | -8.615850e-47 |
| Msa0480430 | Msa0653690 | 0.808206 | 3.470068e-50 | -8.615850e-47 |
| Msa0480430 | Msa0677250 | 0.810996 | 8.729348e-51 | -8.615850e-47 |
| Msa0480430 | Msa0679270 | 0.801538 | 8.589233e-49 | -8.615850e-47 |
| Msa0480430 | Msa0684520 | 0.814668 | 1.369971e-51 | -8.615850e-47 |
| Msa0480430 | Msa0685520 | 0.806789 | 6.934869e-50 | -8.615850e-47 |
| Msa0480430 | Msa0685890 | 0.800419 | 1.453861e-48 | -8.615850e-47 |
| Msa0480430 | Msa0693150 | 0.827093 | 1.892114e-54 | -8.615850e-47 |
| Msa0480430 | Msa0699200 | 0.803952 | 2.727373e-49 | -8.615850e-47 |
| Msa0480430 | Msa0701460 | 0.811335 | 7.372308e-51 | -8.615850e-47 |
| Msa0480430 | Msa0701530 | 0.819802 | 9.591923e-53 | -8.615850e-47 |
| Msa0480430 | Msa0702360 | 0.813686 | 2.257802e-51 | -8.615850e-47 |
| Msa0480430 | Msa0702560 | 0.817257 | 3.621482e-52 | -8.615850e-47 |
| Msa0480430 | Msa0705810 | 0.838758 | 2.377160e-57 | -8.615850e-47 |
| Msa0480430 | Msa0706450 | 0.822522 | 2.264249e-53 | -8.615850e-47 |
| Msa0480430 | Msa0707880 | 0.808465 | 3.056696e-50 | -8.615850e-47 |
| Msa0480430 | Msa0708360 | 0.800680 | 1.286693e-48 | -8.615850e-47 |
| Msa0480430 | Msa0742090 | 0.833486 | 5.186899e-56 | -8.615850e-47 |
| Msa0480430 | Msa0745010 | 0.834503 | 2.886608e-56 | -8.615850e-47 |
| Msa0480430 | Msa0748330 | 0.848287 | 6.747401e-60 | -8.615850e-47 |
| Msa0480430 | Msa0748890 | 0.815463 | 9.126390e-52 | -8.615850e-47 |
| Msa0480430 | Msa0752290 | 0.803431 | 3.497411e-49 | -8.615850e-47 |
| Msa0480430 | Msa0766950 | 0.802453 | 5.569952e-49 | -8.615850e-47 |
| Msa0480430 | Msa0793100 | 0.839249 | 1.774457e-57 | -8.615850e-47 |
| Msa0480430 | Msa0794130 | 0.837395 | 5.330457e-57 | -8.615850e-47 |
| Msa0480430 | Msa0823310 | 0.813433 | 2.566296e-51 | -8.615850e-47 |
| Msa0480430 | Msa0825960 | 0.841557 | 4.421981e-58 | -8.615850e-47 |
| Msa0480430 | Msa0909540 | 0.811467 | 6.899516e-51 | -8.615850e-47 |
| Msa0480430 | Msa0966410 | 0.814701 | 1.347685e-51 | -8.615850e-47 |
| Msa0480430 | Msa0970090 | 0.805183 | 1.509300e-49 | -8.615850e-47 |
| Msa0480430 | Msa0975550 | 0.824262 | 8.878360e-54 | -8.615850e-47 |
| Msa0480430 | Msa0995130 | 0.805919 | 1.058017e-49 | -8.615850e-47 |
| Msa0480430 | Msa1019230 | -0.802562 | 5.288214e-49 | -8.615850e-47 |
| Msa0480430 | Msa1034930 | 0.814271 | 1.677038e-51 | -8.615850e-47 |
| Msa0480430 | Msa1036020 | -0.804770 | 1.841413e-49 | -8.615850e-47 |
| Msa0480430 | Msa1040390 | 0.815676 | 8.182876e-52 | -8.615850e-47 |
| Msa0480430 | Msa1068900 | -0.813636 | 2.314848e-51 | -8.615850e-47 |
| Msa0480430 | Msa1074980 | 0.814535 | 1.466715e-51 | -8.615850e-47 |
| Msa0480430 | Msa1076530 | 0.845900 | 3.042391e-59 | -8.615850e-47 |
| Msa0480430 | Msa1078600 | 0.814425 | 1.550601e-51 | -8.615850e-47 |
| Msa0480430 | Msa1078770 | 0.812035 | 5.190809e-51 | -8.615850e-47 |
| Msa0480430 | Msa1079480 | 0.809410 | 1.918378e-50 | -8.615850e-47 |
| Msa0480430 | Msa1082150 | 0.813563 | 2.403098e-51 | -8.615850e-47 |
| Msa0480430 | Msa1083140 | 0.833973 | 3.919280e-56 | -8.615850e-47 |
| Msa0480430 | Msa1090180 | -0.825785 | 3.879623e-54 | -8.615850e-47 |
| Msa0480430 | Msa1104130 | -0.802200 | 6.280940e-49 | -8.615850e-47 |
| Msa0480430 | Msa1121080 | -0.808515 | 2.982753e-50 | -8.615850e-47 |
| Msa0480430 | Msa1127900 | 0.834650 | 2.651750e-56 | -8.615850e-47 |
| Msa0480430 | Msa1129540 | -0.813489 | 2.494129e-51 | -8.615850e-47 |
| Msa0480430 | Msa1130660 | 0.811166 | 8.020784e-51 | -8.615850e-47 |
| Msa0480430 | Msa1131300 | 0.805753 | 1.146583e-49 | -8.615850e-47 |
| Msa0480430 | Msa1133440 | 0.817175 | 3.779595e-52 | -8.615850e-47 |
| Msa0480430 | Msa1133740 | 0.800483 | 1.411266e-48 | -8.615850e-47 |
| Msa0480430 | Msa1144730 | 0.807385 | 5.187880e-50 | -8.615850e-47 |
| Msa0480430 | Msa1156670 | -0.821851 | 3.240329e-53 | -8.615850e-47 |
| Msa0480430 | Msa1165810 | 0.844621 | 6.750431e-59 | -8.615850e-47 |
| Msa0480430 | Msa1169600 | 0.812245 | 4.671083e-51 | -8.615850e-47 |
| Msa0480430 | Msa1177960 | 0.836786 | 7.627559e-57 | -8.615850e-47 |
| Msa0480430 | Msa1181510 | 0.811736 | 6.029837e-51 | -8.615850e-47 |
| Msa0480430 | Msa1191960 | 0.816024 | 6.843138e-52 | -8.615850e-47 |
| Msa0480430 | Msa1208750 | 0.811074 | 8.397449e-51 | -8.615850e-47 |
| Msa0480430 | Msa1215540 | 0.803963 | 2.712425e-49 | -8.615850e-47 |
| Msa0480430 | Msa1219060 | 0.825233 | 5.242188e-54 | -8.615850e-47 |
| Msa0480430 | Msa1220680 | 0.837574 | 4.795803e-57 | -8.615850e-47 |
| Msa0480430 | Msa1222900 | 0.807192 | 5.698371e-50 | -8.615850e-47 |
| Msa0480430 | Msa1224820 | 0.826377 | 2.805578e-54 | -8.615850e-47 |
| Msa0480430 | Msa1228350 | 0.814734 | 1.325126e-51 | -8.615850e-47 |
| Msa0480430 | Msa1228460 | 0.804917 | 1.715598e-49 | -8.615850e-47 |
| Msa0480430 | Msa1237750 | 0.819533 | 1.104832e-52 | -8.615850e-47 |
| Msa0480430 | Msa1239900 | 0.805109 | 1.564182e-49 | -8.615850e-47 |
| Msa0480430 | Msa1255020 | 0.814585 | 1.429203e-51 | -8.615850e-47 |
| Msa0480430 | Msa1263590 | 0.834477 | 2.930095e-56 | -8.615850e-47 |
| Msa0480430 | Msa1263670 | 0.828506 | 8.656959e-55 | -8.615850e-47 |
| Msa0480430 | Msa1269730 | 0.824189 | 9.238249e-54 | -8.615850e-47 |
| Msa0480430 | Msa1270850 | 0.803271 | 3.775460e-49 | -8.615850e-47 |
| Msa0480430 | Msa1272340 | 0.810703 | 1.010318e-50 | -8.615850e-47 |
| Msa0480430 | Msa1295470 | 0.807138 | 5.851059e-50 | -8.615850e-47 |
| Msa0480430 | Msa1297490 | 0.803682 | 3.102359e-49 | -8.615850e-47 |
| Msa0480430 | Msa1297550 | 0.804112 | 2.526109e-49 | -8.615850e-47 |
| Msa0480430 | Msa1312800 | 0.815614 | 8.446047e-52 | -8.615850e-47 |
| Msa0480430 | Msa1312840 | 0.833140 | 6.328879e-56 | -8.615850e-47 |
| Msa0480430 | Msa1317380 | 0.812563 | 3.981862e-51 | -8.615850e-47 |
| Msa0480430 | Msa1318180 | 0.823399 | 1.414464e-53 | -8.615850e-47 |
| Msa0480430 | Msa1325260 | 0.811496 | 6.799199e-51 | -8.615850e-47 |
| Msa0480430 | Msa1333440 | 0.821948 | 3.076921e-53 | -8.615850e-47 |
| Msa0480430 | Msa1350580 | 0.809161 | 2.169672e-50 | -8.615850e-47 |
| Msa0480430 | Msa1353040 | 0.801164 | 1.024293e-48 | -8.615850e-47 |
| Msa0480430 | Msa1358340 | 0.836723 | 7.918362e-57 | -8.615850e-47 |
| Msa0480430 | Msa1359890 | 0.835160 | 1.972117e-56 | -8.615850e-47 |
| Msa0480430 | Msa1369180 | 0.825006 | 5.931544e-54 | -8.615850e-47 |
| Msa0480430 | Msa1373390 | 0.842857 | 2.001932e-58 | -8.615850e-47 |
| Msa0480430 | Msa1375780 | 0.850929 | 1.235187e-60 | -8.615850e-47 |
| Msa0480430 | Msa1379270 | 0.817943 | 2.537359e-52 | -8.615850e-47 |
| Msa0480430 | Msa1380720 | 0.823723 | 1.188172e-53 | -8.615850e-47 |
| Msa0480430 | Msa1387520 | 0.809074 | 2.264766e-50 | -8.615850e-47 |
| Msa0480430 | Msa1388610 | 0.814827 | 1.263585e-51 | -8.615850e-47 |
| Msa0480430 | Msa1390330 | 0.815837 | 7.533032e-52 | -8.615850e-47 |
| Msa0480430 | Msa1391430 | 0.802999 | 4.296511e-49 | -8.615850e-47 |
| Msa0480430 | Msa1394900 | 0.807152 | 5.811797e-50 | -8.615850e-47 |
| Msa0480430 | Msa1395580 | 0.804027 | 2.630289e-49 | -8.615850e-47 |
| Msa0480430 | Msa1395720 | -0.808993 | 2.356489e-50 | -8.615850e-47 |
| Msa0480430 | Msa1400830 | 0.817384 | 3.391604e-52 | -8.615850e-47 |
| Msa0480430 | Msa1403820 | 0.806600 | 7.602148e-50 | -8.615850e-47 |
| Msa0480430 | Msa1404690 | 0.819229 | 1.296074e-52 | -8.615850e-47 |
| Msa0480430 | Msa1405380 | 0.816544 | 5.236482e-52 | -8.615850e-47 |
| Msa0480430 | Msa1411390 | 0.825474 | 4.596436e-54 | -8.615850e-47 |
| Msa0480430 | Msa1423190 | 0.821868 | 3.211250e-53 | -8.615850e-47 |
| Msa0480430 | Msa1430630 | 0.801969 | 7.006022e-49 | -8.615850e-47 |
| Msa0480430 | Msa1439880 | 0.823781 | 1.151201e-53 | -8.615850e-47 |
| Msa0480430 | Msa1449320 | 0.800803 | 1.214194e-48 | -8.615850e-47 |
| Msa0480430 | Msa1452560 | 0.813385 | 2.629639e-51 | -8.615850e-47 |
| Msa0480430 | Msa1453540 | 0.809530 | 1.807820e-50 | -8.615850e-47 |
| Msa0480430 | Msa1455560 | 0.802332 | 5.899257e-49 | -8.615850e-47 |
| Msa0480430 | Msa1456390 | 0.809862 | 1.533836e-50 | -8.615850e-47 |
| Msa0480430 | Msa1459540 | 0.800744 | 1.248519e-48 | -8.615850e-47 |
| Msa0480430 | Msa1462600 | 0.825949 | 3.547046e-54 | -8.615850e-47 |
| Msa0480430 | Msa1466130 | -0.807178 | 5.739451e-50 | -8.615850e-47 |
| Msa0242290 | Msa0480430 | 0.800016 | 1.756550e-48 | -8.615850e-47 |
| Msa0253160 | Msa0480430 | 0.825954 | 3.535690e-54 | -8.615850e-47 |
| Msa0255770 | Msa0480430 | 0.804252 | 2.361264e-49 | -8.615850e-47 |
| Msa0256590 | Msa0480430 | 0.802952 | 4.395136e-49 | -8.615850e-47 |
| Msa0272570 | Msa0480430 | 0.801022 | 1.095624e-48 | -8.615850e-47 |
| Msa0280120 | Msa0480430 | 0.819068 | 1.410333e-52 | -8.615850e-47 |
| Msa0291940 | Msa0480430 | 0.825485 | 4.569859e-54 | -8.615850e-47 |
| Msa0295730 | Msa0480430 | 0.808925 | 2.436899e-50 | -8.615850e-47 |
| Msa0306160 | Msa0480430 | 0.842981 | 1.854990e-58 | -8.615850e-47 |
| Msa0316380 | Msa0480430 | 0.806060 | 9.881031e-50 | -8.615850e-47 |
| Msa0334280 | Msa0480430 | 0.824677 | 7.089491e-54 | -8.615850e-47 |
| Msa0344680 | Msa0480430 | 0.809737 | 1.631890e-50 | -8.615850e-47 |
| Msa0347280 | Msa0480430 | 0.877519 | 5.890614e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480430 | MtrunA17_Chr3g0137971 | 93.333 | 330 | 11 | 2 | 1 | 319 | 1 | 330 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480430 | AT5G11270.1 | 48.659 | 261 | 125 | 1 | 61 | 312 | 91 | 351 | 9.03e-67 | 213 |
Find 64 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGAATACGAGAACATTT+TGG | 0.252301 | 3_3:+85704120 | None:intergenic |
| GAATCTCCGGGCGTAGTTTC+AGG | 0.263805 | 3_3:+85705652 | None:intergenic |
| GGTGATACTGCTGATGGTTT+AGG | 0.275225 | 3_3:+85705673 | None:intergenic |
| TGAATGCTGATGGTGATTAT+TGG | 0.310496 | 3_3:-85704202 | Msa0480430:three_prime_UTR |
| CACCAGCCTTGATCACGCTT+GGG | 0.331948 | 3_3:-85704256 | Msa0480430:three_prime_UTR |
| TTCTCGAAAGAGATTGAAAA+AGG | 0.338696 | 3_3:-85705536 | Msa0480430:CDS |
| GATCATGCTCATGCAGAATC+TGG | 0.343580 | 3_3:-85705607 | Msa0480430:CDS |
| GCTTGGGGTTGAGTTATATA+AGG | 0.343854 | 3_3:-85704240 | Msa0480430:three_prime_UTR |
| TCAGTTTACACCACGGGGAT+GGG | 0.412949 | 3_3:+85707424 | None:intergenic |
| TTCGCTGCAAAGAAGAGGAT+TGG | 0.420945 | 3_3:+85707355 | None:intergenic |
| GCTGATGGTTTAGGTTCATC+AGG | 0.425177 | 3_3:+85705682 | None:intergenic |
| TTCATGACATGCAACAGAAT+TGG | 0.427701 | 3_3:-85705561 | Msa0480430:CDS |
| CTCAGTTTACACCACGGGGA+TGG | 0.443413 | 3_3:+85707423 | None:intergenic |
| CTCAACCCCAAGCGTGATCA+AGG | 0.446457 | 3_3:+85704250 | None:intergenic |
| TCACCAGCCTTGATCACGCT+TGG | 0.449052 | 3_3:-85704257 | Msa0480430:three_prime_UTR |
| CGCGGAGAACAGTTATTAAG+TGG | 0.452000 | 3_3:-85704435 | Msa0480430:CDS |
| TCGCTGCAAAGAAGAGGATT+GGG | 0.456309 | 3_3:+85707356 | None:intergenic |
| TTCTGTTGCATGTCATGAAT+AGG | 0.457484 | 3_3:+85705565 | None:intergenic |
| TTGGCTAGAGCATTGAAAAC+TGG | 0.460688 | 3_3:-85706803 | Msa0480430:CDS |
| ATAGGTAAGTTAGACTTCTT+CGG | 0.466152 | 3_3:+85705583 | None:intergenic |
| CGTGAGTTGGAAGGTGTGTT+GGG | 0.479759 | 3_3:-85706950 | Msa0480430:CDS |
| TCATTAGCAGACTGCTGGTA+AGG | 0.483094 | 3_3:+85704367 | None:intergenic |
| TTGTTTCATTAGCAGACTGC+TGG | 0.483884 | 3_3:+85704362 | None:intergenic |
| TGTTTGAAAAGCAACTCAAA+TGG | 0.492775 | 3_3:+85707067 | None:intergenic |
| ATTCGCTGAAGCTTAGAACT+TGG | 0.492933 | 3_3:-85706838 | Msa0480430:CDS |
| CAGTTTACACCACGGGGATG+GGG | 0.503270 | 3_3:+85707425 | None:intergenic |
| AAAGGCTTACACTTAGTTTG+CGG | 0.505407 | 3_3:+85706777 | None:intergenic |
| ACCCCAAGCGTGATCAAGGC+TGG | 0.508368 | 3_3:+85704254 | None:intergenic |
| TGCTTTGTTAGAACGTGAGT+TGG | 0.513640 | 3_3:-85706963 | Msa0480430:CDS |
| CTCAGCATCAGAAGACTTGG+TGG | 0.517452 | 3_3:+85705715 | None:intergenic |
| AGCTCTATCAAGACAGAGCT+CGG | 0.525713 | 3_3:+85705765 | None:intergenic |
| AGAGCGAGAAGGAAGAGTGA+AGG | 0.528288 | 3_3:+85707317 | None:intergenic |
| ACGTGAGTTGGAAGGTGTGT+TGG | 0.531369 | 3_3:-85706951 | Msa0480430:CDS |
| AGAGTGAAGGAGAAGAGAAG+AGG | 0.540225 | 3_3:+85707330 | None:intergenic |
| AGACAAACGTGCCGAGGAGG+GGG | 0.542683 | 3_3:-85704407 | Msa0480430:CDS |
| ACCAGCCTTGATCACGCTTG+GGG | 0.548676 | 3_3:-85704255 | Msa0480430:three_prime_UTR |
| GTTTCAGGTGATACTGCTGA+TGG | 0.555775 | 3_3:+85705667 | None:intergenic |
| AGGCTCAGCATCAGAAGACT+TGG | 0.557597 | 3_3:+85705712 | None:intergenic |
| CGGTGACAATTGAAGAGTAG+AGG | 0.560168 | 3_3:+85707289 | None:intergenic |
| TGGTAAGGAAGACGATGCTC+TGG | 0.560826 | 3_3:+85704382 | None:intergenic |
| AAATTGACTCATGTTACAGA+GGG | 0.567201 | 3_3:-85707106 | Msa0480430:CDS |
| AACTTGGCAATTGAATACAT+TGG | 0.575518 | 3_3:-85706822 | Msa0480430:CDS |
| AGCATCAGAAGACTTGGTGG+AGG | 0.576518 | 3_3:+85705718 | None:intergenic |
| TAGGTTCATCAGGAATCGAT+AGG | 0.584575 | 3_3:+85705692 | None:intergenic |
| GTATCACCTGAAACTACGCC+CGG | 0.589871 | 3_3:-85705658 | Msa0480430:CDS |
| GAAGACAAACGTGCCGAGGA+GGG | 0.595141 | 3_3:-85704409 | Msa0480430:CDS |
| CAGTGTTTAGTCACAGTCAG+AGG | 0.597333 | 3_3:-85707381 | Msa0480430:CDS |
| AAAGGCTCAACTTGACACGC+TGG | 0.611700 | 3_3:-85705518 | Msa0480430:CDS |
| TTGTTAGAACGTGAGTTGGA+AGG | 0.619119 | 3_3:-85706959 | Msa0480430:CDS |
| TGAAGACAAACGTGCCGAGG+AGG | 0.619168 | 3_3:-85704410 | Msa0480430:CDS |
| AAGACAAACGTGCCGAGGAG+GGG | 0.620622 | 3_3:-85704408 | Msa0480430:CDS |
| GAAGTACTGCTGAATGCTGA+TGG | 0.624828 | 3_3:-85704212 | Msa0480430:three_prime_UTR |
| TGCATGTTTCAAACATTCCG+CGG | 0.630435 | 3_3:-85704453 | Msa0480430:CDS |
| GACTAAACACTGATTCGCGA+CGG | 0.635511 | 3_3:+85707392 | None:intergenic |
| AAAATTGACTCATGTTACAG+AGG | 0.638213 | 3_3:-85707107 | Msa0480430:CDS |
| GCATCAGAAGACTTGGTGGA+GGG | 0.649310 | 3_3:+85705719 | None:intergenic |
| GTTTGAAGACAAACGTGCCG+AGG | 0.651860 | 3_3:-85704413 | Msa0480430:CDS |
| TGTTACAGAGGGGAATGACG+AGG | 0.686418 | 3_3:-85707095 | Msa0480430:CDS |
| TACAGAGGGGAATGACGAGG+AGG | 0.700089 | 3_3:-85707092 | Msa0480430:CDS |
| CCTTCAAAACCCCATCCCCG+TGG | 0.704755 | 3_3:-85707434 | Msa0480430:five_prime_UTR |
| ACAGATATCAGCGAAACACA+AGG | 0.708447 | 3_3:-85706902 | Msa0480430:CDS |
| CACTTAATAACTGTTCTCCG+CGG | 0.713242 | 3_3:+85704436 | None:intergenic |
| GAGTTTACATGAGATCAAAG+CGG | 0.731573 | 3_3:-85705492 | Msa0480430:CDS |
| AATTGACTCATGTTACAGAG+GGG | 0.739510 | 3_3:-85707105 | Msa0480430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGCATAGAATAATAAATT+AGG | + | chr3_3:85704409-85704428 | None:intergenic | 15.0% |
| !! | CTAAAAATACAAAATTCAAA+AGG | + | chr3_3:85704810-85704829 | None:intergenic | 15.0% |
| !! | AATTAAACTCAAAACAAATT+AGG | + | chr3_3:85704833-85704852 | None:intergenic | 15.0% |
| !! | AATTTAATAGTGAGATTTAT+TGG | + | chr3_3:85706797-85706816 | None:intergenic | 15.0% |
| !! | TTCCAAAAAGAAAAACAATA+AGG | - | chr3_3:85704304-85704323 | Msa0480430:three_prime_UTR | 20.0% |
| !!! | AACCTTATTGTTTTTCTTTT+TGG | + | chr3_3:85704309-85704328 | None:intergenic | 20.0% |
| !! | TATGAATCATTGAATTGTAT+TGG | + | chr3_3:85704375-85704394 | None:intergenic | 20.0% |
| !! | TTAATTCATATATACAACGT+TGG | + | chr3_3:85704914-85704933 | None:intergenic | 20.0% |
| !! | GAATAAAAAGTTTAAGCAAA+CGG | + | chr3_3:85705168-85705187 | None:intergenic | 20.0% |
| !! | TTTATATTAAGAATCTCAGA+TGG | - | chr3_3:85705572-85705591 | Msa0480430:CDS | 20.0% |
| !! | TTCTTTATAAAAAGAATCTC+CGG | + | chr3_3:85705930-85705949 | None:intergenic | 20.0% |
| !!! | AAGATTTTACTAGTTATGTA+TGG | + | chr3_3:85706217-85706236 | None:intergenic | 20.0% |
| !! | ACATTTGATATATTTAGCAT+CGG | - | chr3_3:85706603-85706622 | Msa0480430:intron | 20.0% |
| !!! | TTTTTGAGGAATTTGATAAT+TGG | + | chr3_3:85707403-85707422 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTCTTTTTGGAAG+AGG | + | chr3_3:85704303-85704322 | None:intergenic | 25.0% |
| ! | AATTGTATTGGATTTGGATT+TGG | + | chr3_3:85704363-85704382 | None:intergenic | 25.0% |
| ! | TCATTGAATTGTATTGGATT+TGG | + | chr3_3:85704369-85704388 | None:intergenic | 25.0% |
| ! | AATGATGTAGAAAAAAGTAG+TGG | - | chr3_3:85704691-85704710 | Msa0480430:intron | 25.0% |
| ! | ATATATACAACGTTGGTATT+TGG | + | chr3_3:85704907-85704926 | None:intergenic | 25.0% |
| ! | ATGATATGAATAGGATTACT+TGG | - | chr3_3:85705011-85705030 | Msa0480430:intron | 25.0% |
| ! | AATGTTAGTAGTTAGTTAGT+TGG | - | chr3_3:85705299-85705318 | Msa0480430:intron | 25.0% |
| ! | TAGTATATTTGCCTTTAATC+AGG | + | chr3_3:85705468-85705487 | None:intergenic | 25.0% |
| !! | CTAGTTGATATATTAAAGAG+TGG | - | chr3_3:85705485-85705504 | Msa0480430:intron | 25.0% |
| ! | TCTTTATAAAAAGAATCTCC+GGG | + | chr3_3:85705929-85705948 | None:intergenic | 25.0% |
| ! | AAACTTGTGATATTGAAGTA+TGG | + | chr3_3:85706120-85706139 | None:intergenic | 25.0% |
| !! | CTTCAATATCACAAGTTTTA+TGG | - | chr3_3:85706122-85706141 | Msa0480430:intron | 25.0% |
| ! | AAACTTGTGATATTGAAGTA+TGG | + | chr3_3:85706120-85706139 | None:intergenic | 25.0% |
| !! | CTTCAATATCACAAGTTTTA+TGG | - | chr3_3:85706122-85706141 | Msa0480430:intron | 25.0% |
| ! | ACATAACTTCTGATTTAAGA+GGG | + | chr3_3:85706304-85706323 | None:intergenic | 25.0% |
| ! | AACATAACTTCTGATTTAAG+AGG | + | chr3_3:85706305-85706324 | None:intergenic | 25.0% |
| !! | GTGACTTTTTAATCTAATGA+TGG | - | chr3_3:85706831-85706850 | Msa0480430:CDS | 25.0% |
| ! | AATAGAATATATGCACAAAG+AGG | + | chr3_3:85706911-85706930 | None:intergenic | 25.0% |
| ! | AGTTAACAAGTTGTGAAATA+AGG | + | chr3_3:85707033-85707052 | None:intergenic | 25.0% |
| !! | TTTGGTATTTGACATTTTAG+CGG | + | chr3_3:85707431-85707450 | None:intergenic | 25.0% |
| !! | AAATGAATACGAGAACATTT+TGG | + | chr3_3:85707449-85707468 | None:intergenic | 25.0% |
| ! | ATTTTTCTCAGTTTACACCA+CGG | + | chr3_3:85704152-85704171 | None:intergenic | 30.0% |
| ! | ATTGGATTTGGATTTGGAAT+TGG | + | chr3_3:85704357-85704376 | None:intergenic | 30.0% |
| ! | AAAATTGACTCATGTTACAG+AGG | - | chr3_3:85704459-85704478 | Msa0480430:CDS | 30.0% |
| ! | AAATTGACTCATGTTACAGA+GGG | - | chr3_3:85704460-85704479 | Msa0480430:CDS | 30.0% |
| TGTTTGAAAAGCAACTCAAA+TGG | + | chr3_3:85704502-85704521 | None:intergenic | 30.0% | |
| AACTTGGCAATTGAATACAT+TGG | - | chr3_3:85704744-85704763 | Msa0480430:intron | 30.0% | |
| GTGTATCAGATGATATGAAT+AGG | - | chr3_3:85705002-85705021 | Msa0480430:intron | 30.0% | |
| ATCATACAGGTATTTCATGT+AGG | + | chr3_3:85705073-85705092 | None:intergenic | 30.0% | |
| AAATGCAGATCATATCATAC+AGG | + | chr3_3:85705086-85705105 | None:intergenic | 30.0% | |
| TCTTAAACACTTGTCTTGTA+TGG | + | chr3_3:85705117-85705136 | None:intergenic | 30.0% | |
| TTAAGAAACCAAAATGCTTG+TGG | - | chr3_3:85705131-85705150 | Msa0480430:intron | 30.0% | |
| CCTTATCAATGAATGACAAA+AGG | + | chr3_3:85705242-85705261 | None:intergenic | 30.0% | |
| ! | CCTTTTGTCATTCATTGATA+AGG | - | chr3_3:85705239-85705258 | Msa0480430:intron | 30.0% |
| !!! | TTACTTTTTCTTGTCCCTAA+AGG | + | chr3_3:85705419-85705438 | None:intergenic | 30.0% |
| ! | ATACATCCAAGTTGAAGTTA+AGG | + | chr3_3:85705542-85705561 | None:intergenic | 30.0% |
| TTATCTGCAACAAATTCGAA+AGG | + | chr3_3:85705769-85705788 | None:intergenic | 30.0% | |
| ATAGGTAAGTTAGACTTCTT+CGG | + | chr3_3:85705986-85706005 | None:intergenic | 30.0% | |
| TTCTCGAAAGAGATTGAAAA+AGG | - | chr3_3:85706030-85706049 | Msa0480430:intron | 30.0% | |
| ATGGCAAGTTTAACTATGTA+TGG | + | chr3_3:85706159-85706178 | None:intergenic | 30.0% | |
| TGATGCTTGTATTAGTATTC+TGG | - | chr3_3:85706343-85706362 | Msa0480430:intron | 30.0% | |
| TTAACATGTATTGCAAGTCT+TGG | + | chr3_3:85706499-85706518 | None:intergenic | 30.0% | |
| TGGACGACTTGAAAATAAAT+GGG | - | chr3_3:85706562-85706581 | Msa0480430:intron | 30.0% | |
| AAATGGGGTAAATGTCATAT+AGG | - | chr3_3:85706578-85706597 | Msa0480430:intron | 30.0% | |
| AATGGGGTAAATGTCATATA+GGG | - | chr3_3:85706579-85706598 | Msa0480430:intron | 30.0% | |
| !! | AGTGAGATTTATTGGTTCAA+TGG | + | chr3_3:85706789-85706808 | None:intergenic | 30.0% |
| AATGCTATAATATGCAGTGA+TGG | + | chr3_3:85706959-85706978 | None:intergenic | 30.0% | |
| !!! | TTTTAGCGGACTATTTTTTG+AGG | + | chr3_3:85707417-85707436 | None:intergenic | 30.0% |
| ! | TTTTTCTCAGTTTACACCAC+GGG | + | chr3_3:85704151-85704170 | None:intergenic | 35.0% |
| GTGGTGTAAACTGAGAAAAA+TGG | - | chr3_3:85704151-85704170 | Msa0480430:three_prime_UTR | 35.0% | |
| !! | GTTTTTCTTTTTGGAAGAGG+CGG | + | chr3_3:85704300-85704319 | None:intergenic | 35.0% |
| ! | AATTGACTCATGTTACAGAG+GGG | - | chr3_3:85704461-85704480 | Msa0480430:CDS | 35.0% |
| ! | AAAGGCTTACACTTAGTTTG+CGG | + | chr3_3:85704792-85704811 | None:intergenic | 35.0% |
| TCATCTGATACACTTAGTTG+TGG | + | chr3_3:85704995-85705014 | None:intergenic | 35.0% | |
| ! | TACTTGGTTTGAGTATGAAG+AGG | - | chr3_3:85705027-85705046 | Msa0480430:intron | 35.0% |
| ! | ACTGTTTTCCACAAGCATTT+TGG | + | chr3_3:85705142-85705161 | None:intergenic | 35.0% |
| GTCATTCATTGATAAGGAGA+AGG | - | chr3_3:85705245-85705264 | Msa0480430:intron | 35.0% | |
| AGGAGAAGGAAAAAGTAAAC+TGG | - | chr3_3:85705259-85705278 | Msa0480430:intron | 35.0% | |
| TAGTAGTTAGTTAGTTGGTC+AGG | - | chr3_3:85705304-85705323 | Msa0480430:intron | 35.0% | |
| AGTAGTTAGTTAGTTGGTCA+GGG | - | chr3_3:85705305-85705324 | Msa0480430:intron | 35.0% | |
| GGTGTTTGCAAGCAAATTAA+CGG | + | chr3_3:85705521-85705540 | None:intergenic | 35.0% | |
| CAAACACCTTAACTTCAACT+TGG | - | chr3_3:85705533-85705552 | Msa0480430:CDS | 35.0% | |
| CAATCCCTAATGTTAACTTC+CGG | - | chr3_3:85705725-85705744 | Msa0480430:CDS | 35.0% | |
| TTCTGTTGCATGTCATGAAT+AGG | + | chr3_3:85706004-85706023 | None:intergenic | 35.0% | |
| TTCATGACATGCAACAGAAT+TGG | - | chr3_3:85706005-85706024 | Msa0480430:intron | 35.0% | |
| GAGTTTACATGAGATCAAAG+CGG | - | chr3_3:85706074-85706093 | Msa0480430:intron | 35.0% | |
| ! | TGGCAAGTTTAACTTACAGT+GGG | + | chr3_3:85706100-85706119 | None:intergenic | 35.0% |
| ! | ATGGCAAGTTTAACTTACAG+TGG | + | chr3_3:85706101-85706120 | None:intergenic | 35.0% |
| !! | TACACTCCATTTTTCTAGTC+CGG | - | chr3_3:85706270-85706289 | Msa0480430:intron | 35.0% |
| GCATACATGATGATACAACT+GGG | + | chr3_3:85706392-85706411 | None:intergenic | 35.0% | |
| AGCATACATGATGATACAAC+TGG | + | chr3_3:85706393-85706412 | None:intergenic | 35.0% | |
| GTGGACGACTTGAAAATAAA+TGG | - | chr3_3:85706561-85706580 | Msa0480430:intron | 35.0% | |
| GGACGACTTGAAAATAAATG+GGG | - | chr3_3:85706563-85706582 | Msa0480430:intron | 35.0% | |
| ATGGGGTAAATGTCATATAG+GGG | - | chr3_3:85706580-85706599 | Msa0480430:intron | 35.0% | |
| ! | CAAAGAAGCATATAAGGTGA+TGG | + | chr3_3:85706704-85706723 | None:intergenic | 35.0% |
| ACCTTATATGCTTCTTTGTG+CGG | - | chr3_3:85706706-85706725 | Msa0480430:intron | 35.0% | |
| !! | GAGATTTATTGGTTCAATGG+TGG | + | chr3_3:85706786-85706805 | None:intergenic | 35.0% |
| ! | TGAATGCTGATGGTGATTAT+TGG | - | chr3_3:85707364-85707383 | Msa0480430:CDS | 35.0% |
| ! | TTTTCTCAGTTTACACCACG+GGG | + | chr3_3:85704150-85704169 | None:intergenic | 40.0% |
| ! | TGCTTTGTTAGAACGTGAGT+TGG | - | chr3_3:85704603-85704622 | Msa0480430:intron | 40.0% |
| ! | TTGTTAGAACGTGAGTTGGA+AGG | - | chr3_3:85704607-85704626 | Msa0480430:intron | 40.0% |
| ACAGATATCAGCGAAACACA+AGG | - | chr3_3:85704664-85704683 | Msa0480430:intron | 40.0% | |
| GTAGAAAAAAGTAGTGGCGA+TGG | - | chr3_3:85704697-85704716 | Msa0480430:intron | 40.0% | |
| ATTCGCTGAAGCTTAGAACT+TGG | - | chr3_3:85704728-85704747 | Msa0480430:intron | 40.0% | |
| !! | TTGGCTAGAGCATTGAAAAC+TGG | - | chr3_3:85704763-85704782 | Msa0480430:intron | 40.0% |
| !! | TCTGATTTGCTTCCTTGACT+TGG | - | chr3_3:85705216-85705235 | Msa0480430:intron | 40.0% |
| AATGACAAAAGGCCAAGTCA+AGG | + | chr3_3:85705231-85705250 | None:intergenic | 40.0% | |
| GGAAAACAGGAAATGCTAGT+AGG | - | chr3_3:85705326-85705345 | Msa0480430:intron | 40.0% | |
| AAACAGGAAATGCTAGTAGG+AGG | - | chr3_3:85705329-85705348 | Msa0480430:intron | 40.0% | |
| AACAGGAAATGCTAGTAGGA+GGG | - | chr3_3:85705330-85705349 | Msa0480430:intron | 40.0% | |
| CTCCTGCTTAGAACTTCTTT+GGG | - | chr3_3:85705367-85705386 | Msa0480430:intron | 40.0% | |
| TCCTGCTTAGAACTTCTTTG+GGG | - | chr3_3:85705368-85705387 | Msa0480430:intron | 40.0% | |
| ! | AGTAGTGTAGTGGTTTGGAT+TGG | + | chr3_3:85705396-85705415 | None:intergenic | 40.0% |
| AAAGGAGTAGTGTAGTGGTT+TGG | + | chr3_3:85705401-85705420 | None:intergenic | 40.0% | |
| AACCACTACACTACTCCTTT+AGG | - | chr3_3:85705401-85705420 | Msa0480430:intron | 40.0% | |
| ACCACTACACTACTCCTTTA+GGG | - | chr3_3:85705402-85705421 | Msa0480430:intron | 40.0% | |
| GTAAACTTGATAGATCAGCC+AGG | - | chr3_3:85705435-85705454 | Msa0480430:intron | 40.0% | |
| !! | TCAGATGGATTTTCCTTGCA+AGG | - | chr3_3:85705587-85705606 | Msa0480430:CDS | 40.0% |
| !! | CAGATGGATTTTCCTTGCAA+GGG | - | chr3_3:85705588-85705607 | Msa0480430:CDS | 40.0% |
| !! | AGATGGATTTTCCTTGCAAG+GGG | - | chr3_3:85705589-85705608 | Msa0480430:CDS | 40.0% |
| GTTCATGTGATAAAGCGAGA+AGG | - | chr3_3:85705638-85705657 | Msa0480430:CDS | 40.0% | |
| ATAAAGCGAGAAGGAAAGAG+AGG | - | chr3_3:85705647-85705666 | Msa0480430:CDS | 40.0% | |
| TAAAGCGAGAAGGAAAGAGA+GGG | - | chr3_3:85705648-85705667 | Msa0480430:CDS | 40.0% | |
| GAGTCCGGAAGTTAACATTA+GGG | + | chr3_3:85705732-85705751 | None:intergenic | 40.0% | |
| TGAGTCCGGAAGTTAACATT+AGG | + | chr3_3:85705733-85705752 | None:intergenic | 40.0% | |
| GTGAAACTGAGAAATGAGTC+CGG | + | chr3_3:85705747-85705766 | None:intergenic | 40.0% | |
| TAGGTTCATCAGGAATCGAT+AGG | + | chr3_3:85705877-85705896 | None:intergenic | 40.0% | |
| ATTTAAGAGGGAATTGCTGC+CGG | + | chr3_3:85706292-85706311 | None:intergenic | 40.0% | |
| ! | ACGATATGACACTTAGCTTG+AGG | + | chr3_3:85706543-85706562 | None:intergenic | 40.0% |
| TCAAGCTAAGTGTCATATCG+TGG | - | chr3_3:85706542-85706561 | Msa0480430:intron | 40.0% | |
| ! | AAGGTGATGGTTGACATTGT+GGG | + | chr3_3:85706691-85706710 | None:intergenic | 40.0% |
| ! | TAAGGTGATGGTTGACATTG+TGG | + | chr3_3:85706692-85706711 | None:intergenic | 40.0% |
| TCACTTGTGCACCATAGAAT+TGG | + | chr3_3:85706732-85706751 | None:intergenic | 40.0% | |
| ! | CAAAGAGGCTTTGTCTAACA+TGG | + | chr3_3:85706896-85706915 | None:intergenic | 40.0% |
| AAAGTGACAAGCATGTGTCT+TGG | - | chr3_3:85706980-85706999 | Msa0480430:CDS | 40.0% | |
| TAGTTCAAGACAGACAGGTA+AGG | + | chr3_3:85707063-85707082 | None:intergenic | 40.0% | |
| CATTGTAGTTCAAGACAGAC+AGG | + | chr3_3:85707068-85707087 | None:intergenic | 40.0% | |
| TGCATGTTTCAAACATTCCG+CGG | - | chr3_3:85707113-85707132 | Msa0480430:intron | 40.0% | |
| CACTTAATAACTGTTCTCCG+CGG | + | chr3_3:85707133-85707152 | None:intergenic | 40.0% | |
| TTGTTTCATTAGCAGACTGC+TGG | + | chr3_3:85707207-85707226 | None:intergenic | 40.0% | |
| GCTTGGGGTTGAGTTATATA+AGG | - | chr3_3:85707326-85707345 | Msa0480430:CDS | 40.0% | |
| !! | GACTAAACACTGATTCGCGA+CGG | + | chr3_3:85704177-85704196 | None:intergenic | 45.0% |
| CAGTGTTTAGTCACAGTCAG+AGG | - | chr3_3:85704185-85704204 | Msa0480430:three_prime_UTR | 45.0% | |
| TCGCTGCAAAGAAGAGGATT+GGG | + | chr3_3:85704213-85704232 | None:intergenic | 45.0% | |
| TTCGCTGCAAAGAAGAGGAT+TGG | + | chr3_3:85704214-85704233 | None:intergenic | 45.0% | |
| ! | AGGTTTTCGCTGCAAAGAAG+AGG | + | chr3_3:85704219-85704238 | None:intergenic | 45.0% |
| AGAGTGAAGGAGAAGAGAAG+AGG | + | chr3_3:85704239-85704258 | None:intergenic | 45.0% | |
| !!! | TAGAGGTTTTGAGAGCGAGA+AGG | + | chr3_3:85704263-85704282 | None:intergenic | 45.0% |
| CGGTGACAATTGAAGAGTAG+AGG | + | chr3_3:85704280-85704299 | None:intergenic | 45.0% | |
| GTTAGTTGGTCAGGGAAAAC+AGG | - | chr3_3:85705313-85705332 | Msa0480430:intron | 45.0% | |
| !! | AGTTCTAAGCAGGAGGTCTA+GGG | + | chr3_3:85705362-85705381 | None:intergenic | 45.0% |
| !! | AAGTTCTAAGCAGGAGGTCT+AGG | + | chr3_3:85705363-85705382 | None:intergenic | 45.0% |
| !! | CCAAAGAAGTTCTAAGCAGG+AGG | + | chr3_3:85705369-85705388 | None:intergenic | 45.0% |
| CCTCCTGCTTAGAACTTCTT+TGG | - | chr3_3:85705366-85705385 | Msa0480430:intron | 45.0% | |
| !! | ACCCCAAAGAAGTTCTAAGC+AGG | + | chr3_3:85705372-85705391 | None:intergenic | 45.0% |
| TCCCTAAAGGAGTAGTGTAG+TGG | + | chr3_3:85705406-85705425 | None:intergenic | 45.0% | |
| ACTTGATAGATCAGCCAGGT+TGG | - | chr3_3:85705439-85705458 | Msa0480430:intron | 45.0% | |
| CTTGATAGATCAGCCAGGTT+GGG | - | chr3_3:85705440-85705459 | Msa0480430:intron | 45.0% | |
| TTGATAGATCAGCCAGGTTG+GGG | - | chr3_3:85705441-85705460 | Msa0480430:intron | 45.0% | |
| ATTGAGCAGACAACTAGCAC+AGG | + | chr3_3:85705709-85705728 | None:intergenic | 45.0% | |
| AGCTCTATCAAGACAGAGCT+CGG | + | chr3_3:85705804-85705823 | None:intergenic | 45.0% | |
| ! | GCTGATGGTTTAGGTTCATC+AGG | + | chr3_3:85705887-85705906 | None:intergenic | 45.0% |
| GGTGATACTGCTGATGGTTT+AGG | + | chr3_3:85705896-85705915 | None:intergenic | 45.0% | |
| ! | GTTTCAGGTGATACTGCTGA+TGG | + | chr3_3:85705902-85705921 | None:intergenic | 45.0% |
| GATCATGCTCATGCAGAATC+TGG | - | chr3_3:85705959-85705978 | Msa0480430:intron | 45.0% | |
| ! | TTGCTGCCGGACTAGAAAAA+TGG | + | chr3_3:85706279-85706298 | None:intergenic | 45.0% |
| ! | GCCGCACAAAGAAGCATATA+AGG | + | chr3_3:85706710-85706729 | None:intergenic | 45.0% |
| TCTTTGTGCGGCCAATTCTA+TGG | - | chr3_3:85706718-85706737 | Msa0480430:intron | 45.0% | |
| CGCGGAGAACAGTTATTAAG+TGG | - | chr3_3:85707131-85707150 | Msa0480430:intron | 45.0% | |
| TCATTAGCAGACTGCTGGTA+AGG | + | chr3_3:85707202-85707221 | None:intergenic | 45.0% | |
| !! | GAAGTACTGCTGAATGCTGA+TGG | - | chr3_3:85707354-85707373 | Msa0480430:CDS | 45.0% |
| !!! | GGGATGGGGTTTTGAAGGTT+TGG | + | chr3_3:85704130-85704149 | None:intergenic | 50.0% |
| TCAGTTTACACCACGGGGAT+GGG | + | chr3_3:85704145-85704164 | None:intergenic | 50.0% | |
| AGAGCGAGAAGGAAGAGTGA+AGG | + | chr3_3:85704252-85704271 | None:intergenic | 50.0% | |
| TGTTACAGAGGGGAATGACG+AGG | - | chr3_3:85704471-85704490 | Msa0480430:CDS | 50.0% | |
| ! | ACGTGAGTTGGAAGGTGTGT+TGG | - | chr3_3:85704615-85704634 | Msa0480430:intron | 50.0% |
| ! | CGTGAGTTGGAAGGTGTGTT+GGG | - | chr3_3:85704616-85704635 | Msa0480430:intron | 50.0% |
| CTTTAATCAGGACCCCAACC+TGG | + | chr3_3:85705456-85705475 | None:intergenic | 50.0% | |
| ! | CAGGTTGGGGTCCTGATTAA+AGG | - | chr3_3:85705454-85705473 | Msa0480430:intron | 50.0% |
| TCAAACTTGCACCCCTTGCA+AGG | + | chr3_3:85705603-85705622 | None:intergenic | 50.0% | |
| ! | TGCAAGGGGTGCAAGTTTGA+AGG | - | chr3_3:85705603-85705622 | Msa0480430:CDS | 50.0% |
| !! | GCATCAGAAGACTTGGTGGA+GGG | + | chr3_3:85705850-85705869 | None:intergenic | 50.0% |
| !! | AGCATCAGAAGACTTGGTGG+AGG | + | chr3_3:85705851-85705870 | None:intergenic | 50.0% |
| CTCAGCATCAGAAGACTTGG+TGG | + | chr3_3:85705854-85705873 | None:intergenic | 50.0% | |
| AGGCTCAGCATCAGAAGACT+TGG | + | chr3_3:85705857-85705876 | None:intergenic | 50.0% | |
| GTATCACCTGAAACTACGCC+CGG | - | chr3_3:85705908-85705927 | Msa0480430:intron | 50.0% | |
| AAAGGCTCAACTTGACACGC+TGG | - | chr3_3:85706048-85706067 | Msa0480430:intron | 50.0% | |
| GTGATGGTTGACATTGTGGG+AGG | + | chr3_3:85706688-85706707 | None:intergenic | 50.0% | |
| GTTTGAAGACAAACGTGCCG+AGG | - | chr3_3:85707153-85707172 | Msa0480430:intron | 50.0% | |
| TGGTAAGGAAGACGATGCTC+TGG | + | chr3_3:85707187-85707206 | None:intergenic | 50.0% | |
| CAGTTTACACCACGGGGATG+GGG | + | chr3_3:85704144-85704163 | None:intergenic | 55.0% | |
| CTCAGTTTACACCACGGGGA+TGG | + | chr3_3:85704146-85704165 | None:intergenic | 55.0% | |
| TACAGAGGGGAATGACGAGG+AGG | - | chr3_3:85704474-85704493 | Msa0480430:CDS | 55.0% | |
| GAATCTCCGGGCGTAGTTTC+AGG | + | chr3_3:85705917-85705936 | None:intergenic | 55.0% | |
| TGAAGACAAACGTGCCGAGG+AGG | - | chr3_3:85707156-85707175 | Msa0480430:intron | 55.0% | |
| GAAGACAAACGTGCCGAGGA+GGG | - | chr3_3:85707157-85707176 | Msa0480430:intron | 55.0% | |
| AAGACAAACGTGCCGAGGAG+GGG | - | chr3_3:85707158-85707177 | Msa0480430:intron | 55.0% | |
| TCACCAGCCTTGATCACGCT+TGG | - | chr3_3:85707309-85707328 | Msa0480430:CDS | 55.0% | |
| CACCAGCCTTGATCACGCTT+GGG | - | chr3_3:85707310-85707329 | Msa0480430:CDS | 55.0% | |
| ACCAGCCTTGATCACGCTTG+GGG | - | chr3_3:85707311-85707330 | Msa0480430:CDS | 55.0% | |
| CTCAACCCCAAGCGTGATCA+AGG | + | chr3_3:85707319-85707338 | None:intergenic | 55.0% | |
| !! | CCACGGGGATGGGGTTTTGA+AGG | + | chr3_3:85704135-85704154 | None:intergenic | 60.0% |
| CCTTCAAAACCCCATCCCCG+TGG | - | chr3_3:85704132-85704151 | Msa0480430:three_prime_UTR | 60.0% | |
| AGACAAACGTGCCGAGGAGG+GGG | - | chr3_3:85707159-85707178 | Msa0480430:intron | 60.0% | |
| !! | ATGCTCTGGAACCCCCTCCT+CGG | + | chr3_3:85707173-85707192 | None:intergenic | 60.0% |
| ACCCCAAGCGTGATCAAGGC+TGG | + | chr3_3:85707315-85707334 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 85704093 | 85707495 | 85704093 | ID=Msa0480430;Name=Msa0480430 |
| chr3_3 | mRNA | 85704093 | 85707495 | 85704093 | ID=Msa0480430-mRNA-1;Parent=Msa0480430;Name=Msa0480430-mRNA-1;_AED=0.02;_eAED=0.02;_QI=77|1|1|1|1|1|4|264|319 |
| chr3_3 | exon | 85704093 | 85704497 | 85704093 | ID=Msa0480430-mRNA-1:exon:24717;Parent=Msa0480430-mRNA-1 |
| chr3_3 | exon | 85705486 | 85705803 | 85705486 | ID=Msa0480430-mRNA-1:exon:24716;Parent=Msa0480430-mRNA-1 |
| chr3_3 | exon | 85706787 | 85707131 | 85706787 | ID=Msa0480430-mRNA-1:exon:24715;Parent=Msa0480430-mRNA-1 |
| chr3_3 | exon | 85707263 | 85707495 | 85707263 | ID=Msa0480430-mRNA-1:exon:24714;Parent=Msa0480430-mRNA-1 |
| chr3_3 | five_prime_UTR | 85707419 | 85707495 | 85707419 | ID=Msa0480430-mRNA-1:five_prime_utr;Parent=Msa0480430-mRNA-1 |
| chr3_3 | CDS | 85707263 | 85707418 | 85707263 | ID=Msa0480430-mRNA-1:cds;Parent=Msa0480430-mRNA-1 |
| chr3_3 | CDS | 85706787 | 85707131 | 85706787 | ID=Msa0480430-mRNA-1:cds;Parent=Msa0480430-mRNA-1 |
| chr3_3 | CDS | 85705486 | 85705803 | 85705486 | ID=Msa0480430-mRNA-1:cds;Parent=Msa0480430-mRNA-1 |
| chr3_3 | CDS | 85704357 | 85704497 | 85704357 | ID=Msa0480430-mRNA-1:cds;Parent=Msa0480430-mRNA-1 |
| chr3_3 | three_prime_UTR | 85704093 | 85704356 | 85704093 | ID=Msa0480430-mRNA-1:three_prime_utr;Parent=Msa0480430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
