Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353040 | AMP17768.1 | 97.059 | 544 | 12 | 1 | 1 | 544 | 1 | 540 | 0.0 | 1060 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353040 | sp|Q9SFB0|DTX43_ARATH | 63.138 | 529 | 174 | 5 | 14 | 541 | 12 | 520 | 0.0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353040 | A0A1S5QNQ4 | 97.059 | 544 | 12 | 1 | 1 | 544 | 1 | 540 | 0.0 | 1060 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012780 | Msa0353040 | 0.814589 | 1.426521e-51 | -8.615850e-47 |
| Msa0012810 | Msa0353040 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa0012820 | Msa0353040 | 0.817959 | 2.515307e-52 | -8.615850e-47 |
| Msa0028950 | Msa0353040 | -0.808986 | 2.365372e-50 | -8.615850e-47 |
| Msa0042390 | Msa0353040 | -0.800066 | 1.715647e-48 | -8.615850e-47 |
| Msa0044250 | Msa0353040 | -0.831446 | 1.662063e-55 | -8.615850e-47 |
| Msa0044320 | Msa0353040 | -0.823996 | 1.025217e-53 | -8.615850e-47 |
| Msa0061590 | Msa0353040 | 0.800659 | 1.298929e-48 | -8.615850e-47 |
| Msa0090760 | Msa0353040 | -0.816643 | 4.974603e-52 | -8.615850e-47 |
| Msa0106110 | Msa0353040 | 0.817740 | 2.818844e-52 | -8.615850e-47 |
| Msa0152640 | Msa0353040 | 0.803057 | 4.179286e-49 | -8.615850e-47 |
| Msa0199740 | Msa0353040 | -0.857561 | 1.501218e-62 | -8.615850e-47 |
| Msa0240640 | Msa0353040 | -0.800212 | 1.602011e-48 | -8.615850e-47 |
| Msa0242290 | Msa0353040 | -0.844398 | 7.749218e-59 | -8.615850e-47 |
| Msa0270840 | Msa0353040 | -0.820647 | 6.142084e-53 | -8.615850e-47 |
| Msa0280500 | Msa0353040 | -0.816476 | 5.424086e-52 | -8.615850e-47 |
| Msa0313800 | Msa0353040 | -0.809695 | 1.666490e-50 | -8.615850e-47 |
| Msa0315010 | Msa0353040 | -0.802997 | 4.300640e-49 | -8.615850e-47 |
| Msa0319710 | Msa0353040 | -0.817659 | 2.940027e-52 | -8.615850e-47 |
| Msa0327900 | Msa0353040 | -0.807996 | 3.847028e-50 | -8.615850e-47 |
| Msa0341110 | Msa0353040 | 0.804594 | 2.004354e-49 | -8.615850e-47 |
| Msa0346790 | Msa0353040 | -0.811664 | 6.252927e-51 | -8.615850e-47 |
| Msa0353040 | Msa0365110 | -0.810999 | 8.716760e-51 | -8.615850e-47 |
| Msa0353040 | Msa0380650 | -0.805387 | 1.367848e-49 | -8.615850e-47 |
| Msa0353040 | Msa0387970 | -0.822775 | 1.978190e-53 | -8.615850e-47 |
| Msa0353040 | Msa0392540 | -0.832793 | 7.719194e-56 | -8.615850e-47 |
| Msa0353040 | Msa0400060 | 0.917026 | 8.760871e-86 | -8.615850e-47 |
| Msa0353040 | Msa0424300 | 0.802677 | 5.008050e-49 | -8.615850e-47 |
| Msa0353040 | Msa0430290 | -0.803780 | 2.960049e-49 | -8.615850e-47 |
| Msa0353040 | Msa0440310 | -0.834313 | 3.221420e-56 | -8.615850e-47 |
| Msa0353040 | Msa0443820 | 0.805645 | 1.207633e-49 | -8.615850e-47 |
| Msa0353040 | Msa0487490 | -0.804679 | 1.924040e-49 | -8.615850e-47 |
| Msa0353040 | Msa0494750 | 0.897970 | 8.381345e-77 | -8.615850e-47 |
| Msa0353040 | Msa0514330 | 0.820390 | 7.034767e-53 | -8.615850e-47 |
| Msa0353040 | Msa0525270 | -0.806999 | 6.261253e-50 | -8.615850e-47 |
| Msa0353040 | Msa0525280 | -0.802128 | 6.498809e-49 | -8.615850e-47 |
| Msa0353040 | Msa0530340 | -0.803167 | 3.966509e-49 | -8.615850e-47 |
| Msa0353040 | Msa0533270 | -0.806187 | 9.293011e-50 | -8.615850e-47 |
| Msa0353040 | Msa0548210 | -0.828083 | 1.094767e-54 | -8.615850e-47 |
| Msa0353040 | Msa0556080 | -0.809785 | 1.593329e-50 | -8.615850e-47 |
| Msa0353040 | Msa0589290 | -0.802709 | 4.933812e-49 | -8.615850e-47 |
| Msa0353040 | Msa0627050 | -0.819935 | 8.940851e-53 | -8.615850e-47 |
| Msa0353040 | Msa0629820 | -0.802165 | 6.383801e-49 | -8.615850e-47 |
| Msa0353040 | Msa0629980 | -0.819003 | 1.458897e-52 | -8.615850e-47 |
| Msa0353040 | Msa0644630 | -0.802076 | 6.659852e-49 | -8.615850e-47 |
| Msa0353040 | Msa0647710 | -0.803237 | 3.836571e-49 | -8.615850e-47 |
| Msa0353040 | Msa0649310 | -0.807333 | 5.319558e-50 | -8.615850e-47 |
| Msa0353040 | Msa0651410 | -0.809332 | 1.993824e-50 | -8.615850e-47 |
| Msa0353040 | Msa0761640 | -0.802144 | 6.448774e-49 | -8.615850e-47 |
| Msa0353040 | Msa0806720 | -0.804858 | 1.765660e-49 | -8.615850e-47 |
| Msa0353040 | Msa0806760 | -0.803542 | 3.317119e-49 | -8.615850e-47 |
| Msa0353040 | Msa0842050 | -0.801498 | 8.751555e-49 | -8.615850e-47 |
| Msa0353040 | Msa0882700 | -0.801628 | 8.231723e-49 | -8.615850e-47 |
| Msa0353040 | Msa0911910 | -0.818264 | 2.146863e-52 | -8.615850e-47 |
| Msa0353040 | Msa0944690 | -0.814735 | 1.324514e-51 | -8.615850e-47 |
| Msa0353040 | Msa0945960 | -0.801177 | 1.018480e-48 | -8.615850e-47 |
| Msa0353040 | Msa1034930 | -0.815528 | 8.829707e-52 | -8.615850e-47 |
| Msa0353040 | Msa1083460 | -0.808838 | 2.543476e-50 | -8.615850e-47 |
| Msa0353040 | Msa1182800 | -0.800323 | 1.521068e-48 | -8.615850e-47 |
| Msa0353040 | Msa1281130 | 0.803486 | 3.406936e-49 | -8.615850e-47 |
| Msa0353040 | Msa1320330 | 0.804623 | 1.976698e-49 | -8.615850e-47 |
| Msa0353040 | Msa1406020 | -0.821495 | 3.917214e-53 | -8.615850e-47 |
| Msa0353040 | Msa1412520 | -0.803372 | 3.597139e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353040 | MtrunA17_Chr3g0088471 | 96.875 | 544 | 13 | 1 | 1 | 544 | 1 | 540 | 0.0 | 1058 |
| Msa0353040 | MtrunA17_Chr8g0352151 | 68.996 | 558 | 149 | 5 | 1 | 540 | 1 | 552 | 0.0 | 754 |
| Msa0353040 | MtrunA17_Chr2g0328761 | 59.316 | 526 | 176 | 3 | 17 | 539 | 16 | 506 | 0.0 | 596 |
| Msa0353040 | MtrunA17_Chr8g0352171 | 76.302 | 384 | 91 | 0 | 160 | 543 | 8 | 391 | 0.0 | 595 |
| Msa0353040 | MtrunA17_Chr5g0448591 | 43.989 | 366 | 203 | 1 | 174 | 539 | 186 | 549 | 9.07e-98 | 307 |
| Msa0353040 | MtrunA17_Chr5g0448591 | 43.836 | 73 | 41 | 0 | 32 | 104 | 109 | 181 | 9.11e-13 | 70.9 |
| Msa0353040 | MtrunA17_Chr7g0243421 | 45.185 | 270 | 136 | 4 | 272 | 535 | 4 | 267 | 2.14e-67 | 219 |
| Msa0353040 | MtrunA17_Chr8g0352161 | 57.292 | 96 | 38 | 1 | 67 | 162 | 3 | 95 | 4.44e-24 | 97.8 |
| Msa0353040 | MtrunA17_Chr7g0243411 | 62.821 | 78 | 29 | 0 | 30 | 107 | 110 | 187 | 4.87e-18 | 85.5 |
| Msa0353040 | MtrunA17_Chr7g0243411 | 42.529 | 87 | 50 | 0 | 184 | 270 | 204 | 290 | 1.14e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353040 | AT3G08040.1 | 63.138 | 529 | 174 | 5 | 14 | 541 | 12 | 520 | 0.0 | 613 |
| Msa0353040 | AT1G51340.3 | 57.514 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 0.0 | 566 |
| Msa0353040 | AT1G51340.5 | 57.514 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 0.0 | 566 |
| Msa0353040 | AT1G51340.2 | 57.514 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 0.0 | 566 |
| Msa0353040 | AT1G51340.1 | 59.100 | 511 | 187 | 4 | 29 | 539 | 20 | 508 | 0.0 | 555 |
| Msa0353040 | AT3G08040.2 | 62.529 | 427 | 147 | 5 | 116 | 541 | 2 | 416 | 8.86e-180 | 513 |
| Msa0353040 | AT1G51340.4 | 55.904 | 415 | 157 | 5 | 1 | 415 | 2 | 390 | 7.37e-136 | 400 |
| Msa0353040 | AT4G38380.3 | 39.608 | 510 | 246 | 7 | 35 | 542 | 33 | 482 | 5.02e-113 | 345 |
| Msa0353040 | AT4G38380.2 | 39.608 | 510 | 246 | 7 | 35 | 542 | 105 | 554 | 1.98e-112 | 345 |
| Msa0353040 | AT4G38380.1 | 39.608 | 510 | 246 | 7 | 35 | 542 | 105 | 554 | 1.98e-112 | 345 |
| Msa0353040 | AT4G38380.4 | 39.960 | 503 | 240 | 7 | 42 | 542 | 2 | 444 | 3.70e-112 | 341 |
| Msa0353040 | AT2G38330.1 | 39.960 | 503 | 232 | 6 | 38 | 538 | 79 | 513 | 8.86e-107 | 330 |
| Msa0353040 | AT4G38380.5 | 45.000 | 360 | 192 | 3 | 185 | 542 | 189 | 544 | 8.31e-96 | 302 |
| Msa0353040 | AT4G38380.5 | 45.714 | 70 | 38 | 0 | 35 | 104 | 105 | 174 | 6.64e-12 | 68.6 |
Find 156 sgRNAs with CRISPR-Local
Find 469 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATACTCAGTGTTGTCAAAT+AGG | 0.247790 | 3_1:-22632657 | None:intergenic |
| TCATTAGCCTTTGTCTTTGA+TGG | 0.249674 | 3_1:+22631441 | Msa0353040:CDS |
| GAGTTGTTATCAAAAGATTT+AGG | 0.265569 | 3_1:+22627947 | Msa0353040:five_prime_UTR |
| GTCTTTGATGGTGTGAACTA+TGG | 0.289153 | 3_1:+22631453 | Msa0353040:CDS |
| TTTGCAGCTAAACCTCTATT+AGG | 0.292824 | 3_1:+22629683 | Msa0353040:CDS |
| AGGCATGACTTCATTTGATT+TGG | 0.302975 | 3_1:-22629173 | None:intergenic |
| GAGGTTTAGCTGCAAATATA+AGG | 0.308083 | 3_1:-22629676 | None:intergenic |
| TCCTGCAGTGCTTCTCTCCT+TGG | 0.308788 | 3_1:+22629891 | Msa0353040:CDS |
| AATACTGACCAAAGGGAAAA+TGG | 0.321677 | 3_1:-22629065 | None:intergenic |
| TGGAATGCAGCCATTGGAAT+TGG | 0.328091 | 3_1:-22630928 | None:intergenic |
| TAAGGGTTGCAGCTTGAATA+AGG | 0.333331 | 3_1:-22629658 | None:intergenic |
| TCCAAACCTGCCTCCAGGTT+TGG | 0.334784 | 3_1:+22630947 | Msa0353040:CDS |
| TACATTCTGTGTGACCTTAT+CGG | 0.334917 | 3_1:+22630882 | Msa0353040:CDS |
| TCCAAACCTGGAGGCAGGTT+TGG | 0.341311 | 3_1:-22630948 | None:intergenic |
| TCAGGTTAGGCTCATTCTTA+AGG | 0.341953 | 3_1:+22627893 | Msa0353040:five_prime_UTR |
| AAGGTTTGATCTTGACTTGT+AGG | 0.349663 | 3_1:-22624265 | None:intergenic |
| TATGGTTGCATTCAGTTTCC+GGG | 0.349757 | 3_1:+22630283 | Msa0353040:intron |
| ATGAGTCTTCGCATGTTTGC+TGG | 0.360088 | 3_1:+22631703 | Msa0353040:CDS |
| ACAACACTAGGACGTATAAA+TGG | 0.362648 | 3_1:-22632480 | None:intergenic |
| ATACTCAGTGTTGTCAAATA+GGG | 0.365604 | 3_1:-22632656 | None:intergenic |
| CTTATAGACACAGCATTCAT+AGG | 0.370693 | 3_1:+22628886 | Msa0353040:CDS |
| TTTCAAGGTGCCATCCTGTT+TGG | 0.373585 | 3_1:-22629233 | None:intergenic |
| TCTTCCATTGTTACTAATAG+TGG | 0.375359 | 3_1:+22629551 | Msa0353040:CDS |
| GCCATGCAAGGAATCTTTAG+AGG | 0.376294 | 3_1:+22629913 | Msa0353040:CDS |
| TGTAGCTGAAGAAGATACTA+TGG | 0.376482 | 3_1:+22629099 | Msa0353040:CDS |
| CAGGTTAGGCTCATTCTTAA+GGG | 0.377608 | 3_1:+22627894 | Msa0353040:five_prime_UTR |
| ATTGACAACATGGACGATAC+TGG | 0.379609 | 3_1:-22632505 | None:intergenic |
| TGGTTTAGCTGTTGCAATAC+AGG | 0.384211 | 3_1:+22630993 | Msa0353040:CDS |
| CTTGGTAGGTTGTTCAGGTT+AGG | 0.385269 | 3_1:+22627880 | Msa0353040:intron |
| CTGTATTCAACCAAGCTTCA+AGG | 0.387444 | 3_1:+22629038 | Msa0353040:CDS |
| TGATATACAATCATTGAAGT+TGG | 0.391041 | 3_1:+22632797 | Msa0353040:three_prime_UTR |
| ATATACTTGGTAGGTTGTTC+AGG | 0.395469 | 3_1:+22627875 | Msa0353040:intron |
| CTCTACTATTGTGATAGTCT+TGG | 0.395842 | 3_1:+22632451 | Msa0353040:three_prime_UTR |
| TACAAAGTGTTGTTAAATAG+TGG | 0.396724 | 3_1:-22632558 | None:intergenic |
| CGCTTATTCTGCATACTCCT+TGG | 0.398929 | 3_1:+22631488 | Msa0353040:CDS |
| AACCTACCGATGACATATAA+AGG | 0.398982 | 3_1:-22629955 | None:intergenic |
| GTAGAAGAATCAGGTCTAAT+CGG | 0.404981 | 3_1:-22632606 | None:intergenic |
| TTCGCATGTTTGCTGGTGTA+TGG | 0.406622 | 3_1:+22631710 | Msa0353040:CDS |
| TGCAGGATGGGAACAGGAAC+AGG | 0.408714 | 3_1:+22632285 | Msa0353040:intron |
| TCAAAAGATTTAGGATATCA+TGG | 0.413001 | 3_1:+22627956 | Msa0353040:exon |
| ACAAAGGCTAATGAATTGAT+TGG | 0.419858 | 3_1:-22631432 | None:intergenic |
| TTCAATAGGTGGTCTATTGT+TGG | 0.424542 | 3_1:+22630843 | Msa0353040:intron |
| GCAGTTCAATGAAGGCATTA+AGG | 0.427823 | 3_1:+22629150 | Msa0353040:CDS |
| TGCATATGCAGGATGGGAAC+AGG | 0.431882 | 3_1:+22632279 | Msa0353040:intron |
| TGCATTCCAAACCTGCCTCC+AGG | 0.432229 | 3_1:+22630942 | Msa0353040:CDS |
| AGAGTGAGTCAAAACCTATA+AGG | 0.432817 | 3_1:+22629579 | Msa0353040:CDS |
| AATCTTAAGTACTTAACAGC+TGG | 0.437108 | 3_1:-22629853 | None:intergenic |
| GCCATCCTGTTTGGTTGCAC+CGG | 0.438411 | 3_1:-22629224 | None:intergenic |
| CCGGGAGGCCTAGTCTGATT+AGG | 0.440861 | 3_1:-22631272 | None:intergenic |
| TAGGATATCATGGAAGATAA+TGG | 0.443090 | 3_1:+22627966 | Msa0353040:exon |
| TGCTGCTAATGAGGCCGATA+AGG | 0.443449 | 3_1:-22630896 | None:intergenic |
| CCGGTGGAACTTGCGGCGGC+AGG | 0.443943 | 3_1:+22629004 | Msa0353040:CDS |
| ATCTGCAAATCCTTCATGCT+TGG | 0.446669 | 3_1:-22630552 | None:intergenic |
| AAACCCATTGCACCTAATAG+AGG | 0.448781 | 3_1:-22629695 | None:intergenic |
| TCTTGAAGCAAATGATCATC+AGG | 0.455615 | 3_1:-22629193 | None:intergenic |
| TACTTAAGATTGAGAGCCTT+AGG | 0.458860 | 3_1:+22629865 | Msa0353040:CDS |
| AAACCTCTATTAGGTGCAAT+GGG | 0.462124 | 3_1:+22629692 | Msa0353040:CDS |
| GTTGGAGGTGGATTATACTT+TGG | 0.465967 | 3_1:+22631213 | Msa0353040:CDS |
| AGAAGCCGGTGCAACCAAAC+AGG | 0.466060 | 3_1:+22629219 | Msa0353040:CDS |
| AGGTTTAGCTGCAAATATAA+GGG | 0.468515 | 3_1:-22629675 | None:intergenic |
| GCCAAGGAGAGAAGCACTGC+AGG | 0.469082 | 3_1:-22629892 | None:intergenic |
| CTCTCTCTAGTAGTTGGAGG+TGG | 0.470542 | 3_1:+22631201 | Msa0353040:CDS |
| CAAAACCTATAAGGAAGAAA+AGG | 0.474193 | 3_1:+22629588 | Msa0353040:CDS |
| CTGAGAGAGCACATGTGAAA+TGG | 0.475794 | 3_1:-22630373 | None:intergenic |
| TGCCATAGCGTAGAAGAATC+AGG | 0.477013 | 3_1:-22632615 | None:intergenic |
| CAGGTTTGGAATGCAGCCAT+TGG | 0.477643 | 3_1:-22630934 | None:intergenic |
| TAAACCTCTATTAGGTGCAA+TGG | 0.484001 | 3_1:+22629691 | Msa0353040:CDS |
| TCTAAGAGTAGGGGAAAGGT+TGG | 0.485105 | 3_1:+22624215 | Msa0353040:five_prime_UTR |
| GTGGCCTCTGAGAAAACGCC+AGG | 0.490069 | 3_1:-22632310 | None:intergenic |
| AGCTAAACCATCGGCAAGAA+GGG | 0.492708 | 3_1:-22630980 | None:intergenic |
| GAATGTAACTGCTATAACTC+TGG | 0.492814 | 3_1:-22630866 | None:intergenic |
| ATTATAGTCTTTCTCAGCAA+AGG | 0.493012 | 3_1:-22631121 | None:intergenic |
| GTTGGACTCTCTCTAGTAGT+TGG | 0.497300 | 3_1:+22631195 | Msa0353040:CDS |
| AAGCACTGCAGGAGCACCTA+AGG | 0.498166 | 3_1:-22629881 | None:intergenic |
| TCCCTAGCTAAGGAGATACT+TGG | 0.498581 | 3_1:+22628814 | Msa0353040:CDS |
| GGCATACCTGAGTTCTCCTA+AGG | 0.499583 | 3_1:-22624284 | None:intergenic |
| TGCAAATCCTTCATGCTTGG+AGG | 0.500933 | 3_1:-22630549 | None:intergenic |
| ACATCATCCCTTCTTGCCGA+TGG | 0.501002 | 3_1:+22630973 | Msa0353040:CDS |
| ACAAGTCAAGATCAAACCTT+AGG | 0.503774 | 3_1:+22624268 | Msa0353040:five_prime_UTR |
| CAGCTAAACCATCGGCAAGA+AGG | 0.505865 | 3_1:-22630981 | None:intergenic |
| TAGAAGAATCAGGTCTAATC+GGG | 0.506914 | 3_1:-22632605 | None:intergenic |
| AAGATTATTCTTCAAGCTGT+CGG | 0.508803 | 3_1:+22632741 | Msa0353040:three_prime_UTR |
| GTATGCATTGAACGTCGCTA+TGG | 0.510063 | 3_1:+22630305 | Msa0353040:CDS |
| GCAGCAACAGCAAGTGCAGA+TGG | 0.510544 | 3_1:-22628847 | None:intergenic |
| ATCTTAAGTACTTAACAGCT+GGG | 0.512448 | 3_1:-22629852 | None:intergenic |
| GGACTCTCTCTAGTAGTTGG+AGG | 0.514348 | 3_1:+22631198 | Msa0353040:CDS |
| GACCTGATTCTTCTACGCTA+TGG | 0.515432 | 3_1:+22632613 | Msa0353040:three_prime_UTR |
| TGGGAACAGGAACAGGACCC+TGG | 0.518247 | 3_1:+22632292 | Msa0353040:CDS |
| AAATGGTAATCCTTGAAGCT+TGG | 0.519230 | 3_1:-22629048 | None:intergenic |
| TACTTCAAATTAGGCATCAG+AGG | 0.520511 | 3_1:+22630345 | Msa0353040:CDS |
| TCCCAAGTATCTCCTTAGCT+AGG | 0.521837 | 3_1:-22628816 | None:intergenic |
| CATGCGAAGACTCATATAGA+TGG | 0.522469 | 3_1:-22631695 | None:intergenic |
| GCAGAAAAGCAGTTCAATGA+AGG | 0.522794 | 3_1:+22629142 | Msa0353040:CDS |
| AAACAGACAATTGATCCTAA+AGG | 0.524234 | 3_1:-22632408 | None:intergenic |
| GGGAATCCATCTTGAATACA+AGG | 0.528068 | 3_1:-22628795 | None:intergenic |
| GCCTCATTAGCAGCAAGGTT+AGG | 0.530525 | 3_1:+22630904 | Msa0353040:CDS |
| CTTCTCTCCTTGGCCATGCA+AGG | 0.533820 | 3_1:+22629901 | Msa0353040:CDS |
| CCCTAGCTAAGGAGATACTT+GGG | 0.534178 | 3_1:+22628815 | Msa0353040:CDS |
| ATGTAGCCTTGTATTCAAGA+TGG | 0.535860 | 3_1:+22628789 | Msa0353040:intron |
| ACCTAACCTTGCTGCTAATG+AGG | 0.536880 | 3_1:-22630905 | None:intergenic |
| AAAGATTCCTTGCATGGCCA+AGG | 0.537559 | 3_1:-22629908 | None:intergenic |
| TTGAAGTAAAATATGAGTAG+TGG | 0.539372 | 3_1:-22630330 | None:intergenic |
| CCCTCTAAAGATTCCTTGCA+TGG | 0.539576 | 3_1:-22629914 | None:intergenic |
| TCTTTGAAGAAAACTGATAG+AGG | 0.540796 | 3_1:-22628026 | None:intergenic |
| CCTAATCAGACTAGGCCTCC+CGG | 0.542740 | 3_1:+22631272 | Msa0353040:CDS |
| TGTCATCCAAACCTGGAGGC+AGG | 0.543083 | 3_1:-22630953 | None:intergenic |
| ACAGCATTCATAGGCCACTT+AGG | 0.544657 | 3_1:+22628895 | Msa0353040:CDS |
| ATCGTCCATGTTGTCAATTG+TGG | 0.546443 | 3_1:+22632510 | Msa0353040:three_prime_UTR |
| GGTGGATTATACTTTGGAGC+CGG | 0.547954 | 3_1:+22631219 | Msa0353040:CDS |
| CAAGATGGATTCCCTAGCTA+AGG | 0.548364 | 3_1:+22628804 | Msa0353040:CDS |
| GTGTCTATAAGAGAAGCAAT+TGG | 0.549405 | 3_1:-22628874 | None:intergenic |
| CCTGCCGCCGCAAGTTCCAC+CGG | 0.553878 | 3_1:-22629004 | None:intergenic |
| AAGTTGTAATACTGACCAAA+GGG | 0.554378 | 3_1:-22629072 | None:intergenic |
| CCCAAGTATCTCCTTAGCTA+GGG | 0.561981 | 3_1:-22628815 | None:intergenic |
| CCATGCAAGGAATCTTTAGA+GGG | 0.568460 | 3_1:+22629914 | Msa0353040:CDS |
| GGAAGAGAGTGAAGAATGCA+AGG | 0.568506 | 3_1:-22624244 | None:intergenic |
| AAAATCTAAGAGTAGGGGAA+AGG | 0.568630 | 3_1:+22624211 | Msa0353040:five_prime_UTR |
| TTTAGGGCCGGTGGAACTTG+CGG | 0.569537 | 3_1:+22628997 | Msa0353040:intron |
| GGGATGATGTCATCCAAACC+TGG | 0.571737 | 3_1:-22630960 | None:intergenic |
| GAAGTTGTAATACTGACCAA+AGG | 0.572451 | 3_1:-22629073 | None:intergenic |
| TTAACAGCTGGGGCTAGCAT+AGG | 0.574189 | 3_1:-22629841 | None:intergenic |
| TTTAATGTGTTTAGGGCCGG+TGG | 0.574774 | 3_1:+22628988 | Msa0353040:intron |
| ATAATGCAGTCAAGAACAAG+TGG | 0.577108 | 3_1:+22627997 | Msa0353040:CDS |
| TTGCTTCAAGACATAGAAGC+CGG | 0.577730 | 3_1:+22629205 | Msa0353040:CDS |
| ACAAATTGAAAGATAAGTGA+AGG | 0.583262 | 3_1:-22632858 | None:intergenic |
| CACATTAATGATACATCAAG+AGG | 0.584041 | 3_1:-22632702 | None:intergenic |
| GTTACCACTATTAGTAACAA+TGG | 0.587436 | 3_1:-22629555 | None:intergenic |
| TCTCCTACCTCCAAGCATGA+AGG | 0.589323 | 3_1:+22630542 | Msa0353040:CDS |
| ATAACAACTCAATCAAGAAG+AGG | 0.591987 | 3_1:-22627934 | None:intergenic |
| AGCTTGGTTGAATACAGCAA+TGG | 0.599795 | 3_1:-22629032 | None:intergenic |
| AGCGACGTTCAATGCATACC+CGG | 0.603953 | 3_1:-22630301 | None:intergenic |
| ACAACTCCTTTATATGTCAT+CGG | 0.604310 | 3_1:+22629949 | Msa0353040:CDS |
| AATCCTTCATGCTTGGAGGT+AGG | 0.609737 | 3_1:-22630545 | None:intergenic |
| ATCAAACCTTAGGAGAACTC+AGG | 0.612204 | 3_1:+22624278 | Msa0353040:five_prime_UTR |
| TTGCAGCTTGAATAAGGCCA+AGG | 0.612326 | 3_1:-22629652 | None:intergenic |
| AAGGTTAGGTCCAATTCCAA+TGG | 0.613997 | 3_1:+22630918 | Msa0353040:CDS |
| TACTCAGTGTTGTCAAATAG+GGG | 0.614519 | 3_1:-22632655 | None:intergenic |
| GCATTCCACAATTGACAACA+TGG | 0.624700 | 3_1:-22632515 | None:intergenic |
| TATATCCTCAAGACAATGTG+TGG | 0.625885 | 3_1:-22632329 | None:intergenic |
| TATCGGCCTCATTAGCAGCA+AGG | 0.628449 | 3_1:+22630899 | Msa0353040:CDS |
| AGGGCCGGTGGAACTTGCGG+CGG | 0.628816 | 3_1:+22629000 | Msa0353040:intron |
| ACGATACTGGATACAACACT+AGG | 0.633960 | 3_1:-22632492 | None:intergenic |
| AGAGGCCACACATTGTCTTG+AGG | 0.643794 | 3_1:+22632324 | Msa0353040:CDS |
| GCCGGTGCAACCAAACAGGA+TGG | 0.646558 | 3_1:+22629223 | Msa0353040:CDS |
| GTTATTCACCTAATCAGACT+AGG | 0.646571 | 3_1:+22631264 | Msa0353040:CDS |
| GTTCACACCATCAAAGACAA+AGG | 0.648235 | 3_1:-22631448 | None:intergenic |
| TATTGCAACAGCTAAACCAT+CGG | 0.650175 | 3_1:-22630989 | None:intergenic |
| GCATGTTTGCTGGTGTATGG+AGG | 0.655745 | 3_1:+22631713 | Msa0353040:CDS |
| AAGTAACTACTGCTGCAACA+AGG | 0.664120 | 3_1:+22631145 | Msa0353040:CDS |
| GACTGTGCCGAAAAGTAATG+CGG | 0.674783 | 3_1:-22629630 | None:intergenic |
| ACATTAATGATACATCAAGA+GGG | 0.676174 | 3_1:-22632701 | None:intergenic |
| TGGCCTCTGAGAAAACGCCA+GGG | 0.688941 | 3_1:-22632309 | None:intergenic |
| TCTTAAGTACTTAACAGCTG+GGG | 0.692036 | 3_1:-22629851 | None:intergenic |
| TTGTACTAAATAGTGTATCG+CGG | 0.701950 | 3_1:+22632576 | Msa0353040:three_prime_UTR |
| ATGTTGTCAATTGTGGAATG+CGG | 0.717692 | 3_1:+22632517 | Msa0353040:three_prime_UTR |
| ATGATGTCATCCAAACCTGG+AGG | 0.734599 | 3_1:-22630957 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTACTTTTTTTTTTTTA+AGG | + | chr3_1:22624749-22624768 | Msa0353040:intron | 10.0% |
| !!! | TTTTTTATAGATTTTCTTTT+TGG | - | chr3_1:22625215-22625234 | None:intergenic | 10.0% |
| !! | CCTTTAATTAATTAATTTAT+TGG | - | chr3_1:22626393-22626412 | None:intergenic | 10.0% |
| !! | CCAATAAATTAATTAATTAA+AGG | + | chr3_1:22626390-22626409 | Msa0353040:intron | 10.0% |
| !! | AAAAATATAGAGTTTATATT+AGG | + | chr3_1:22627211-22627230 | Msa0353040:intron | 10.0% |
| !!! | TATTTTGTTAAAAAATAGTT+AGG | + | chr3_1:22627536-22627555 | Msa0353040:intron | 10.0% |
| !!! | TTTTTTTTCTTATATAGAAA+TGG | + | chr3_1:22627775-22627794 | Msa0353040:intron | 10.0% |
| !!! | AATAAAAAACTTTATGTTTT+TGG | - | chr3_1:22628705-22628724 | None:intergenic | 10.0% |
| !!! | ACATAAAGTTTTTTATTTTA+CGG | + | chr3_1:22628708-22628727 | Msa0353040:intron | 10.0% |
| !!! | TATATTTTCAATTCATATTT+TGG | + | chr3_1:22630614-22630633 | Msa0353040:intron | 10.0% |
| !! | AGATAACAAAATATAAAAAA+CGG | - | chr3_1:22631551-22631570 | None:intergenic | 10.0% |
| !! | TGAAAAAATTCATATAGTAA+TGG | + | chr3_1:22624546-22624565 | Msa0353040:intron | 15.0% |
| !!! | GATTTGTTTTATACTTAAAT+TGG | + | chr3_1:22625992-22626011 | Msa0353040:intron | 15.0% |
| !!! | ACATTTGGTTTTATTTTTTT+TGG | - | chr3_1:22626974-22626993 | None:intergenic | 15.0% |
| !!! | TTTTGTCTTATTTATTTTGA+TGG | + | chr3_1:22627833-22627852 | Msa0353040:intron | 15.0% |
| !! | AACATAAATCTAATATTACA+CGG | - | chr3_1:22628549-22628568 | None:intergenic | 15.0% |
| !! | AACATAAACCAAAAATTATA+AGG | + | chr3_1:22628658-22628677 | Msa0353040:intron | 15.0% |
| !!! | CCATTTATAAATATATTTTC+AGG | - | chr3_1:22630091-22630110 | None:intergenic | 15.0% |
| !! | CCTGAAAATATATTTATAAA+TGG | + | chr3_1:22630088-22630107 | Msa0353040:intron | 15.0% |
| !! | GAAAATATATTTATAAATGG+TGG | + | chr3_1:22630091-22630110 | Msa0353040:intron | 15.0% |
| !! | ACATATCTAATGAAATGAAT+TGG | - | chr3_1:22624308-22624327 | None:intergenic | 20.0% |
| !! | AAGATTATATAGATTTGATC+TGG | + | chr3_1:22624341-22624360 | Msa0353040:intron | 20.0% |
| !!! | AGAAATCTAAGTTGATTAAA+AGG | - | chr3_1:22624670-22624689 | None:intergenic | 20.0% |
| !! | AATAAATAATGTGATGAAGT+TGG | - | chr3_1:22624856-22624875 | None:intergenic | 20.0% |
| !!! | TTTATTTTTGGTAGATTTGT+GGG | - | chr3_1:22624890-22624909 | None:intergenic | 20.0% |
| !!! | TTTTATTTTTGGTAGATTTG+TGG | - | chr3_1:22624891-22624910 | None:intergenic | 20.0% |
| !! | ACTATTAATATCTGTCAAAA+TGG | + | chr3_1:22624980-22624999 | Msa0353040:intron | 20.0% |
| !! | ATTACATGCTTAGAATTAAA+TGG | + | chr3_1:22625167-22625186 | Msa0353040:intron | 20.0% |
| !!! | TTATAGATTTTCTTTTTGGT+GGG | - | chr3_1:22625211-22625230 | None:intergenic | 20.0% |
| !!! | TTTATAGATTTTCTTTTTGG+TGG | - | chr3_1:22625212-22625231 | None:intergenic | 20.0% |
| !! | ACTTTAATGAATAATAGTGT+AGG | + | chr3_1:22625278-22625297 | Msa0353040:intron | 20.0% |
| !!! | TCTGTTTTTCTAACTTATTA+CGG | + | chr3_1:22626024-22626043 | Msa0353040:intron | 20.0% |
| !!! | CAAGGTATTTATACTATATT+TGG | - | chr3_1:22626456-22626475 | None:intergenic | 20.0% |
| !! | CAAATATAGTATAAATACCT+TGG | + | chr3_1:22626454-22626473 | Msa0353040:intron | 20.0% |
| !! | TCACTTTATCATTAGTAAAA+AGG | + | chr3_1:22626617-22626636 | Msa0353040:intron | 20.0% |
| !!! | AAGATATTGACTATTGTTAA+AGG | - | chr3_1:22626707-22626726 | None:intergenic | 20.0% |
| !!! | AATGTTTTTGAAGGTTTTTA+TGG | + | chr3_1:22627302-22627321 | Msa0353040:intron | 20.0% |
| !!! | ATGTTTTTGAAGGTTTTTAT+GGG | + | chr3_1:22627303-22627322 | Msa0353040:intron | 20.0% |
| !! | TTCGGATTATATAATTCAAA+CGG | - | chr3_1:22627338-22627357 | None:intergenic | 20.0% |
| !! | TTTATATTATGTTACTGTCA+AGG | + | chr3_1:22627404-22627423 | Msa0353040:intron | 20.0% |
| !! | TTATATTATGTTACTGTCAA+GGG | + | chr3_1:22627405-22627424 | Msa0353040:intron | 20.0% |
| !!! | TTTATCATTTTCCATCTTAT+AGG | + | chr3_1:22627505-22627524 | Msa0353040:intron | 20.0% |
| !!! | TTATCATTTTCCATCTTATA+GGG | + | chr3_1:22627506-22627525 | Msa0353040:intron | 20.0% |
| !!! | TATTTTGATGGTACAAAATA+TGG | + | chr3_1:22627845-22627864 | Msa0353040:intron | 20.0% |
| !!! | CTAAAATGTTATTTAAGCTT+AGG | - | chr3_1:22628255-22628274 | None:intergenic | 20.0% |
| !! | AATATATTTCACATATTGCA+AGG | - | chr3_1:22628580-22628599 | None:intergenic | 20.0% |
| !!! | GTTTTAGTCCTTATAATTTT+TGG | - | chr3_1:22628669-22628688 | None:intergenic | 20.0% |
| !!! | TTTTATTTTACGGACTAAAA+AGG | + | chr3_1:22628718-22628737 | Msa0353040:intron | 20.0% |
| !! | AAGTTATAAGATATTGAACA+TGG | - | chr3_1:22629753-22629772 | None:intergenic | 20.0% |
| !!! | GAGATATTATCTTTTTTTGT+AGG | + | chr3_1:22629813-22629832 | Msa0353040:intron | 20.0% |
| !! | CAAAAAAAATGAACAAGTTA+GGG | - | chr3_1:22630262-22630281 | None:intergenic | 20.0% |
| !!! | CTCATATTTTACTTCAAATT+AGG | + | chr3_1:22630336-22630355 | Msa0353040:CDS | 20.0% |
| !!! | ATTTTTCGGTTTCTTAAAAA+TGG | + | chr3_1:22630573-22630592 | Msa0353040:CDS | 20.0% |
| !! | TTAATATATATCTTGCATCT+CGG | - | chr3_1:22631043-22631062 | None:intergenic | 20.0% |
| !! | TCAACATTTATTTAGTGATT+TGG | + | chr3_1:22631574-22631593 | Msa0353040:intron | 20.0% |
| !! | AAACATGTATAAGATGTTTA+TGG | + | chr3_1:22632193-22632212 | Msa0353040:intron | 20.0% |
| ! | TTTATTGTTATGTTAGTCGT+TGG | - | chr3_1:22624399-22624418 | None:intergenic | 25.0% |
| ! | AAAATACACATCTTTGTCTT+TGG | - | chr3_1:22625121-22625140 | None:intergenic | 25.0% |
| ! | TCTAAGCATGTAATTAATCA+TGG | - | chr3_1:22625161-22625180 | None:intergenic | 25.0% |
| ! | GTTACAAAATGACTCATTAT+GGG | - | chr3_1:22625445-22625464 | None:intergenic | 25.0% |
| ! | TGTTACAAAATGACTCATTA+TGG | - | chr3_1:22625446-22625465 | None:intergenic | 25.0% |
| ! | ATTGTCGTATAATTATTGAC+AGG | - | chr3_1:22625926-22625945 | None:intergenic | 25.0% |
| !!! | TTTTCAATTTTTTCCCAGAA+AGG | + | chr3_1:22626048-22626067 | Msa0353040:intron | 25.0% |
| ! | GTAAAAGAAAAGAACTAAAG+TGG | - | chr3_1:22626086-22626105 | None:intergenic | 25.0% |
| !!! | GATTGTATTTTAAACCACTA+CGG | - | chr3_1:22626119-22626138 | None:intergenic | 25.0% |
| ! | AATGTATATGCATGTACTAT+TGG | + | chr3_1:22626198-22626217 | Msa0353040:intron | 25.0% |
| ! | ACTAGTTAAGGAAACAAAAA+AGG | - | chr3_1:22626538-22626557 | None:intergenic | 25.0% |
| ! | TACAAACTCTCTCAATATAT+AGG | - | chr3_1:22626784-22626803 | None:intergenic | 25.0% |
| !!! | TCCTAAAATTGTTATTTGAG+AGG | + | chr3_1:22626841-22626860 | Msa0353040:intron | 25.0% |
| !! | ACCTCTCAAATAACAATTTT+AGG | - | chr3_1:22626845-22626864 | None:intergenic | 25.0% |
| !!! | AAAATTGTTATTTGAGAGGT+AGG | + | chr3_1:22626845-22626864 | Msa0353040:intron | 25.0% |
| ! | TTCTTATATTGTGAGACATT+TGG | - | chr3_1:22626989-22627008 | None:intergenic | 25.0% |
| ! | ATGCATGTTAAAACTACAAA+TGG | + | chr3_1:22627094-22627113 | Msa0353040:intron | 25.0% |
| ! | TGCATGTTAAAACTACAAAT+GGG | + | chr3_1:22627095-22627114 | Msa0353040:intron | 25.0% |
| ! | TTAAGAAAAAGCCAAATGTT+CGG | - | chr3_1:22627154-22627173 | None:intergenic | 25.0% |
| ! | AGTTTAAATGAGTTGTAGTT+CGG | - | chr3_1:22627178-22627197 | None:intergenic | 25.0% |
| !!! | AGTGTTTCAAATGTTTTTGA+AGG | + | chr3_1:22627293-22627312 | Msa0353040:intron | 25.0% |
| ! | TTATATAATCCGAACTACAT+AGG | + | chr3_1:22627344-22627363 | Msa0353040:intron | 25.0% |
| ! | TATATTATGTTACTGTCAAG+GGG | + | chr3_1:22627406-22627425 | Msa0353040:intron | 25.0% |
| !! | TATCATTTTCCATCTTATAG+GGG | + | chr3_1:22627507-22627526 | Msa0353040:intron | 25.0% |
| ! | ATATGGAACTAACATATACT+TGG | + | chr3_1:22627862-22627881 | Msa0353040:intron | 25.0% |
| ! | GAGTTGTTATCAAAAGATTT+AGG | + | chr3_1:22627947-22627966 | Msa0353040:five_prime_UTR | 25.0% |
| !! | TCAAAAGATTTAGGATATCA+TGG | + | chr3_1:22627956-22627975 | Msa0353040:exon | 25.0% |
| !!! | TAAGTTGATTACACAAATTG+AGG | - | chr3_1:22628062-22628081 | None:intergenic | 25.0% |
| ! | CAGAATAGATGTATATTACA+GGG | - | chr3_1:22628279-22628298 | None:intergenic | 25.0% |
| ! | AAACCAATAAAAGAACTCAT+AGG | - | chr3_1:22628310-22628329 | None:intergenic | 25.0% |
| !!! | GTTTTAATACCTAAAACAGA+AGG | + | chr3_1:22628326-22628345 | Msa0353040:intron | 25.0% |
| !! | AAAAAACTACCTTCTGTTTT+AGG | - | chr3_1:22628338-22628357 | None:intergenic | 25.0% |
| ! | GAAAATGAAACTCTCAAAAT+AGG | + | chr3_1:22628493-22628512 | Msa0353040:intron | 25.0% |
| !! | AATATTACACGGACTATAAT+CGG | - | chr3_1:22628538-22628557 | None:intergenic | 25.0% |
| ! | GAAAAAAAAATGTACCTAAG+TGG | - | chr3_1:22628912-22628931 | None:intergenic | 25.0% |
| ! | TAAACACATTAAAATGAACC+TGG | - | chr3_1:22628981-22629000 | None:intergenic | 25.0% |
| !!! | AGGTTCATTTTAATGTGTTT+AGG | + | chr3_1:22628980-22628999 | Msa0353040:intron | 25.0% |
| !!! | GGTTCATTTTAATGTGTTTA+GGG | + | chr3_1:22628981-22629000 | Msa0353040:intron | 25.0% |
| !!! | ATTTTTCGTCTCATTTTTCA+AGG | - | chr3_1:22629251-22629270 | None:intergenic | 25.0% |
| ! | TTGAAAAATGAGACGAAAAA+TGG | + | chr3_1:22629250-22629269 | Msa0353040:CDS | 25.0% |
| ! | ATAACTCATATCATCAAACA+TGG | - | chr3_1:22629306-22629325 | None:intergenic | 25.0% |
| ! | CTGATACTAATGTTAGAAAA+TGG | + | chr3_1:22629344-22629363 | Msa0353040:intron | 25.0% |
| ! | ATTTGAATTTGCATCTGATA+AGG | - | chr3_1:22629522-22629541 | None:intergenic | 25.0% |
| ! | ACAAACGCATAAATTAGAAT+CGG | + | chr3_1:22630031-22630050 | Msa0353040:intron | 25.0% |
| ! | AAAGTTAATGAGAGAAGATT+TGG | + | chr3_1:22630214-22630233 | Msa0353040:intron | 25.0% |
| ! | GCAAAAAAAATGAACAAGTT+AGG | - | chr3_1:22630263-22630282 | None:intergenic | 25.0% |
| !!! | CTTGTTCATTTTTTTTGCTA+TGG | + | chr3_1:22630265-22630284 | Msa0353040:intron | 25.0% |
| ! | TTGAAGTAAAATATGAGTAG+TGG | - | chr3_1:22630333-22630352 | None:intergenic | 25.0% |
| !!! | TACAAAATGATGATGCTTTT+AGG | + | chr3_1:22630472-22630491 | Msa0353040:intron | 25.0% |
| ! | GTTTCTTAAAAATGGTATGT+TGG | + | chr3_1:22630581-22630600 | Msa0353040:intron | 25.0% |
| ! | TAAAAATGGTATGTTGGAAT+TGG | + | chr3_1:22630587-22630606 | Msa0353040:intron | 25.0% |
| ! | GAGTTTCTTTCAATTTCAAT+AGG | + | chr3_1:22630829-22630848 | Msa0353040:intron | 25.0% |
| ! | TTTCTTTCAATTTCAATAGG+TGG | + | chr3_1:22630832-22630851 | Msa0353040:intron | 25.0% |
| !!! | AACATTTTTGGAAAATACTC+CGG | - | chr3_1:22631241-22631260 | None:intergenic | 25.0% |
| !!! | ATTTGGTATTCTGTTTTTTC+AGG | + | chr3_1:22631591-22631610 | Msa0353040:intron | 25.0% |
| !!! | ATTTTTTCTCTACAAGAGTA+AGG | + | chr3_1:22631645-22631664 | Msa0353040:CDS | 25.0% |
| !!! | TTTTTTCTCTACAAGAGTAA+GGG | + | chr3_1:22631646-22631665 | Msa0353040:CDS | 25.0% |
| ! | AGTTACTTGCTTTCAATATA+AGG | - | chr3_1:22631747-22631766 | None:intergenic | 25.0% |
| !!! | TCAAGTTTTTTAACCTAACA+TGG | + | chr3_1:22631957-22631976 | Msa0353040:intron | 25.0% |
| !! | TTCGTTGTTCAATTTTCATA+TGG | - | chr3_1:22632160-22632179 | None:intergenic | 25.0% |
| !!! | TACAAAGTGTTGTTAAATAG+TGG | - | chr3_1:22632561-22632580 | None:intergenic | 25.0% |
| ! | ACATTAATGATACATCAAGA+GGG | - | chr3_1:22632704-22632723 | None:intergenic | 25.0% |
| ! | TGATATACAATCATTGAAGT+TGG | + | chr3_1:22632797-22632816 | Msa0353040:three_prime_UTR | 25.0% |
| ! | ACAAATTGAAAGATAAGTGA+AGG | - | chr3_1:22632861-22632880 | None:intergenic | 25.0% |
| ! | TAGATTTTTCTCCCTCAAAA+AGG | - | chr3_1:22624199-22624218 | None:intergenic | 30.0% |
| ATCTGGTGTTTATTGTTACT+CGG | + | chr3_1:22624358-22624377 | Msa0353040:intron | 30.0% | |
| CTTTCTCAAATGAAAAATGC+AGG | - | chr3_1:22624720-22624739 | None:intergenic | 30.0% | |
| !! | TTTCATAGTGTGTTTTTGTC+AGG | - | chr3_1:22624955-22624974 | None:intergenic | 30.0% |
| GACAATGCATAAAATATGCA+AGG | + | chr3_1:22625070-22625089 | Msa0353040:intron | 30.0% | |
| GTAATTAATCATGGATGATG+AGG | - | chr3_1:22625152-22625171 | None:intergenic | 30.0% | |
| GACTCATTATGGGTATTAAA+TGG | - | chr3_1:22625435-22625454 | None:intergenic | 30.0% | |
| TTAACAAGAAGTAAAGTACG+TGG | - | chr3_1:22625587-22625606 | None:intergenic | 30.0% | |
| AAGTTTACTTGTGTACTATG+AGG | + | chr3_1:22625652-22625671 | Msa0353040:intron | 30.0% | |
| ! | ATTTAACTGTATCGACGTAT+CGG | - | chr3_1:22625703-22625722 | None:intergenic | 30.0% |
| TTCAGTGTAATTCTATGTGT+CGG | + | chr3_1:22625742-22625761 | Msa0353040:intron | 30.0% | |
| ! | AACTAAAGTGGAACATGTTT+TGG | - | chr3_1:22626074-22626093 | None:intergenic | 30.0% |
| ! | TTTTGACAAAATTGCACACT+TGG | + | chr3_1:22626358-22626377 | Msa0353040:intron | 30.0% |
| ! | TACATCAAGAGAAGATTTTG+TGG | - | chr3_1:22626676-22626695 | None:intergenic | 30.0% |
| ! | CGAACTGATATTCTTTTTCT+GGG | - | chr3_1:22626819-22626838 | None:intergenic | 30.0% |
| ! | TCGAACTGATATTCTTTTTC+TGG | - | chr3_1:22626820-22626839 | None:intergenic | 30.0% |
| AACAATGCATACAATATGCA+AGG | + | chr3_1:22626905-22626924 | Msa0353040:intron | 30.0% | |
| AAAACTACAAATGGGATGTA+AGG | + | chr3_1:22627103-22627122 | Msa0353040:intron | 30.0% | |
| ATATTATGTTACTGTCAAGG+GGG | + | chr3_1:22627407-22627426 | Msa0353040:intron | 30.0% | |
| ATAAGAAAACCCCTATAAGA+TGG | - | chr3_1:22627519-22627538 | None:intergenic | 30.0% | |
| ! | CCTTCTTTTCATGTATTTGT+AGG | - | chr3_1:22627586-22627605 | None:intergenic | 30.0% |
| CCTACAAATACATGAAAAGA+AGG | + | chr3_1:22627583-22627602 | Msa0353040:intron | 30.0% | |
| ATAACAACTCAATCAAGAAG+AGG | - | chr3_1:22627937-22627956 | None:intergenic | 30.0% | |
| TAGGATATCATGGAAGATAA+TGG | + | chr3_1:22627966-22627985 | Msa0353040:exon | 30.0% | |
| ! | TCTTTGAAGAAAACTGATAG+AGG | - | chr3_1:22628029-22628048 | None:intergenic | 30.0% |
| ATCAGACTCTCTAAATCTTA+AGG | + | chr3_1:22628212-22628231 | Msa0353040:intron | 30.0% | |
| CCAGAATAGATGTATATTAC+AGG | - | chr3_1:22628280-22628299 | None:intergenic | 30.0% | |
| CCTGTAATATACATCTATTC+TGG | + | chr3_1:22628277-22628296 | Msa0353040:intron | 30.0% | |
| ! | AGTCCTATGAGTTCTTTTAT+TGG | + | chr3_1:22628304-22628323 | Msa0353040:intron | 30.0% |
| TCTTAATTGAAGTTGTAACC+AGG | + | chr3_1:22628960-22628979 | Msa0353040:intron | 30.0% | |
| AAGTTGTAATACTGACCAAA+GGG | - | chr3_1:22629075-22629094 | None:intergenic | 30.0% | |
| TCTTCCATTGTTACTAATAG+TGG | + | chr3_1:22629551-22629570 | Msa0353040:CDS | 30.0% | |
| GTTACCACTATTAGTAACAA+TGG | - | chr3_1:22629558-22629577 | None:intergenic | 30.0% | |
| CAAAACCTATAAGGAAGAAA+AGG | + | chr3_1:22629588-22629607 | Msa0353040:CDS | 30.0% | |
| AGGTTTAGCTGCAAATATAA+GGG | - | chr3_1:22629678-22629697 | None:intergenic | 30.0% | |
| ATCTTAAGTACTTAACAGCT+GGG | - | chr3_1:22629855-22629874 | None:intergenic | 30.0% | |
| AATCTTAAGTACTTAACAGC+TGG | - | chr3_1:22629856-22629875 | None:intergenic | 30.0% | |
| ACAACTCCTTTATATGTCAT+CGG | + | chr3_1:22629949-22629968 | Msa0353040:CDS | 30.0% | |
| !! | TGATGCTTTTAGGTACATTA+TGG | + | chr3_1:22630482-22630501 | Msa0353040:intron | 30.0% |
| ! | TGAAGGATTTGCAGATTTTT+CGG | + | chr3_1:22630559-22630578 | Msa0353040:CDS | 30.0% |
| ATTAAGTTTGCCTTTATCAC+AGG | + | chr3_1:22631083-22631102 | Msa0353040:intron | 30.0% | |
| ATTATAGTCTTTCTCAGCAA+AGG | - | chr3_1:22631124-22631143 | None:intergenic | 30.0% | |
| !!! | CTGCAAATGAGTTTTGTTTT+AGG | + | chr3_1:22631171-22631190 | Msa0353040:CDS | 30.0% |
| !!! | ATGAGTTTTGTTTTAGGAGT+TGG | + | chr3_1:22631177-22631196 | Msa0353040:CDS | 30.0% |
| ! | GTGAATAACAGCAACATTTT+TGG | - | chr3_1:22631253-22631272 | None:intergenic | 30.0% |
| ACAAAGGCTAATGAATTGAT+TGG | - | chr3_1:22631435-22631454 | None:intergenic | 30.0% | |
| AAAAGAATGCAAACTTACCA+AGG | - | chr3_1:22631508-22631527 | None:intergenic | 30.0% | |
| !!! | TATTCTGTTTTTTCAGGTCT+TGG | + | chr3_1:22631597-22631616 | Msa0353040:intron | 30.0% |
| !! | TACAAGAGTAAGGGTTTTAT+TGG | + | chr3_1:22631655-22631674 | Msa0353040:CDS | 30.0% |
| !! | GTTGTTTTCACAAACTATCA+TGG | - | chr3_1:22631831-22631850 | None:intergenic | 30.0% |
| ! | TAGTGTAGTTTTTGCATCTA+AGG | + | chr3_1:22632016-22632035 | Msa0353040:intron | 30.0% |
| ! | CTAAGGTAGGTGTATATTTT+TGG | + | chr3_1:22632033-22632052 | Msa0353040:intron | 30.0% |
| ATATGAATGATTGATCATCG+TGG | + | chr3_1:22632063-22632082 | Msa0353040:intron | 30.0% | |
| !! | TACATCACTTTTCATCCTTT+AGG | + | chr3_1:22632393-22632412 | Msa0353040:three_prime_UTR | 30.0% |
| AAACAGACAATTGATCCTAA+AGG | - | chr3_1:22632411-22632430 | None:intergenic | 30.0% | |
| !!! | GGATCAATTGTCTGTTTTTT+AGG | + | chr3_1:22632414-22632433 | Msa0353040:three_prime_UTR | 30.0% |
| TTGTACTAAATAGTGTATCG+CGG | + | chr3_1:22632576-22632595 | Msa0353040:three_prime_UTR | 30.0% | |
| ATACTCAGTGTTGTCAAATA+GGG | - | chr3_1:22632659-22632678 | None:intergenic | 30.0% | |
| CACATTAATGATACATCAAG+AGG | - | chr3_1:22632705-22632724 | None:intergenic | 30.0% | |
| AAGATTATTCTTCAAGCTGT+CGG | + | chr3_1:22632741-22632760 | Msa0353040:three_prime_UTR | 30.0% | |
| AGGGAGAAAAATCTAAGAGT+AGG | + | chr3_1:22624204-22624223 | Msa0353040:five_prime_UTR | 35.0% | |
| GGGAGAAAAATCTAAGAGTA+GGG | + | chr3_1:22624205-22624224 | Msa0353040:five_prime_UTR | 35.0% | |
| GGAGAAAAATCTAAGAGTAG+GGG | + | chr3_1:22624206-22624225 | Msa0353040:five_prime_UTR | 35.0% | |
| AAAATCTAAGAGTAGGGGAA+AGG | + | chr3_1:22624211-22624230 | Msa0353040:five_prime_UTR | 35.0% | |
| !! | AAGGTTTGATCTTGACTTGT+AGG | - | chr3_1:22624268-22624287 | None:intergenic | 35.0% |
| ACAAGTCAAGATCAAACCTT+AGG | + | chr3_1:22624268-22624287 | Msa0353040:five_prime_UTR | 35.0% | |
| GTTTATTGTTACTCGGAAGT+CGG | + | chr3_1:22624365-22624384 | Msa0353040:intron | 35.0% | |
| TAGCATAAAGCAATGCCAAT+TGG | - | chr3_1:22624637-22624656 | None:intergenic | 35.0% | |
| !!! | TTGTCAGGCTTTTGGTTTAT+GGG | - | chr3_1:22624940-22624959 | None:intergenic | 35.0% |
| !!! | TTTGTCAGGCTTTTGGTTTA+TGG | - | chr3_1:22624941-22624960 | None:intergenic | 35.0% |
| ATATCTGTCAAAATGGTGAG+CGG | + | chr3_1:22624987-22625006 | Msa0353040:intron | 35.0% | |
| TGCATAAAATATGCAAGGTC+TGG | + | chr3_1:22625075-22625094 | Msa0353040:intron | 35.0% | |
| GCATAAAATATGCAAGGTCT+GGG | + | chr3_1:22625076-22625095 | Msa0353040:intron | 35.0% | |
| CATAAAATATGCAAGGTCTG+GGG | + | chr3_1:22625077-22625096 | Msa0353040:intron | 35.0% | |
| ATACACATCTTTGTCTTTGG+TGG | - | chr3_1:22625118-22625137 | None:intergenic | 35.0% | |
| TGCAGTAAGCATAAGAGATA+AGG | - | chr3_1:22625388-22625407 | None:intergenic | 35.0% | |
| CTTGTCACTAATAAAGTACG+TGG | - | chr3_1:22625531-22625550 | None:intergenic | 35.0% | |
| ! | TCATAGCTTCTGTAGGATTT+TGG | + | chr3_1:22625824-22625843 | Msa0353040:intron | 35.0% |
| TAATCCGTACAAGGTGAATA+TGG | - | chr3_1:22625893-22625912 | None:intergenic | 35.0% | |
| ! | TTTTAAACCACTACGGAATG+AGG | - | chr3_1:22626112-22626131 | None:intergenic | 35.0% |
| ATTTGAGAGGTAGGTCAAAA+AGG | + | chr3_1:22626854-22626873 | Msa0353040:intron | 35.0% | |
| !!! | TTTGGCCTACCTCTTTTTTT+TGG | - | chr3_1:22626956-22626975 | None:intergenic | 35.0% |
| ATGTTTGTAAGCCGAACATT+TGG | + | chr3_1:22627140-22627159 | Msa0353040:intron | 35.0% | |
| GGAACTAACATATACTTGGT+AGG | + | chr3_1:22627866-22627885 | Msa0353040:intron | 35.0% | |
| ATATACTTGGTAGGTTGTTC+AGG | + | chr3_1:22627875-22627894 | Msa0353040:intron | 35.0% | |
| ATAATGCAGTCAAGAACAAG+TGG | + | chr3_1:22627997-22628016 | Msa0353040:CDS | 35.0% | |
| ! | CAGTTTTCTTCAAAGATGCA+AGG | + | chr3_1:22628033-22628052 | Msa0353040:CDS | 35.0% |
| ! | ACTTATTCACCCTTGTTTCT+TGG | + | chr3_1:22628077-22628096 | Msa0353040:intron | 35.0% |
| !! | ATGTAGCCTTGTATTCAAGA+TGG | + | chr3_1:22628789-22628808 | Msa0353040:intron | 35.0% |
| GTGTCTATAAGAGAAGCAAT+TGG | - | chr3_1:22628877-22628896 | None:intergenic | 35.0% | |
| CTTATAGACACAGCATTCAT+AGG | + | chr3_1:22628886-22628905 | Msa0353040:CDS | 35.0% | |
| !! | CATTTTAATGTGTTTAGGGC+CGG | + | chr3_1:22628985-22629004 | Msa0353040:intron | 35.0% |
| AAATGGTAATCCTTGAAGCT+TGG | - | chr3_1:22629051-22629070 | None:intergenic | 35.0% | |
| ! | AAGGATTACCATTTTCCCTT+TGG | + | chr3_1:22629057-22629076 | Msa0353040:CDS | 35.0% |
| AATACTGACCAAAGGGAAAA+TGG | - | chr3_1:22629068-22629087 | None:intergenic | 35.0% | |
| GAAGTTGTAATACTGACCAA+AGG | - | chr3_1:22629076-22629095 | None:intergenic | 35.0% | |
| TGTAGCTGAAGAAGATACTA+TGG | + | chr3_1:22629099-22629118 | Msa0353040:CDS | 35.0% | |
| AGGCATGACTTCATTTGATT+TGG | - | chr3_1:22629176-22629195 | None:intergenic | 35.0% | |
| TCTTGAAGCAAATGATCATC+AGG | - | chr3_1:22629196-22629215 | None:intergenic | 35.0% | |
| AATGAGACGAAAAATGGAGA+TGG | + | chr3_1:22629256-22629275 | Msa0353040:CDS | 35.0% | |
| !!! | AGTCGATGTCATTTTGGTAT+TGG | + | chr3_1:22629394-22629413 | Msa0353040:intron | 35.0% |
| AGAGTGAGTCAAAACCTATA+AGG | + | chr3_1:22629579-22629598 | Msa0353040:CDS | 35.0% | |
| ! | ATGTGCCTTTTCTTCCTTAT+AGG | - | chr3_1:22629596-22629615 | None:intergenic | 35.0% |
| GAGGTTTAGCTGCAAATATA+AGG | - | chr3_1:22629679-22629698 | None:intergenic | 35.0% | |
| TTTGCAGCTAAACCTCTATT+AGG | + | chr3_1:22629683-22629702 | Msa0353040:CDS | 35.0% | |
| TAAACCTCTATTAGGTGCAA+TGG | + | chr3_1:22629691-22629710 | Msa0353040:CDS | 35.0% | |
| AAACCTCTATTAGGTGCAAT+GGG | + | chr3_1:22629692-22629711 | Msa0353040:CDS | 35.0% | |
| TCTTAAGTACTTAACAGCTG+GGG | - | chr3_1:22629854-22629873 | None:intergenic | 35.0% | |
| TACTTAAGATTGAGAGCCTT+AGG | + | chr3_1:22629865-22629884 | Msa0353040:CDS | 35.0% | |
| AACCTACCGATGACATATAA+AGG | - | chr3_1:22629958-22629977 | None:intergenic | 35.0% | |
| TGTTCTCAGAGTCTCTAATT+TGG | - | chr3_1:22630010-22630029 | None:intergenic | 35.0% | |
| CATTGTTAAGAATCACACCT+CGG | + | chr3_1:22630054-22630073 | Msa0353040:intron | 35.0% | |
| ! | TTCAGGTTATATCTTATCCG+AGG | - | chr3_1:22630074-22630093 | None:intergenic | 35.0% |
| GGATGGCTCAATAAATCTTT+AGG | - | chr3_1:22630127-22630146 | None:intergenic | 35.0% | |
| ATTTATTGAGCCATCCCTAA+CGG | + | chr3_1:22630131-22630150 | Msa0353040:intron | 35.0% | |
| ! | GAATTTTGCTTGATCCGTTA+GGG | - | chr3_1:22630148-22630167 | None:intergenic | 35.0% |
| ! | AGAATTTTGCTTGATCCGTT+AGG | - | chr3_1:22630149-22630168 | None:intergenic | 35.0% |
| TACTTCAAATTAGGCATCAG+AGG | + | chr3_1:22630345-22630364 | Msa0353040:CDS | 35.0% | |
| CGAGAGATAAATGTTCGAAT+CGG | - | chr3_1:22630732-22630751 | None:intergenic | 35.0% | |
| TTCAATAGGTGGTCTATTGT+TGG | + | chr3_1:22630843-22630862 | Msa0353040:intron | 35.0% | |
| GAATGTAACTGCTATAACTC+TGG | - | chr3_1:22630869-22630888 | None:intergenic | 35.0% | |
| TACATTCTGTGTGACCTTAT+CGG | + | chr3_1:22630882-22630901 | Msa0353040:CDS | 35.0% | |
| TATTGCAACAGCTAAACCAT+CGG | - | chr3_1:22630992-22631011 | None:intergenic | 35.0% | |
| GTTATTCACCTAATCAGACT+AGG | + | chr3_1:22631264-22631283 | Msa0353040:CDS | 35.0% | |
| !! | TCATTAGCCTTTGTCTTTGA+TGG | + | chr3_1:22631441-22631460 | Msa0353040:CDS | 35.0% |
| !!! | GTAAGGGTTTTATTGGTATC+TGG | + | chr3_1:22631662-22631681 | Msa0353040:CDS | 35.0% |
| TGAAAGCAAGTAACTGTTTG+TGG | + | chr3_1:22631752-22631771 | Msa0353040:intron | 35.0% | |
| CAAACTATCATGGAGAGTTT+AGG | - | chr3_1:22631821-22631840 | None:intergenic | 35.0% | |
| ATAAGCGCTCATCATATAAG+TGG | - | chr3_1:22631922-22631941 | None:intergenic | 35.0% | |
| !! | GTAGTTTTTGCATCTAAGGT+AGG | + | chr3_1:22632020-22632039 | Msa0353040:intron | 35.0% |
| AACATGTCAAATGCATATGC+AGG | + | chr3_1:22632268-22632287 | Msa0353040:intron | 35.0% | |
| TATATCCTCAAGACAATGTG+TGG | - | chr3_1:22632332-22632351 | None:intergenic | 35.0% | |
| CTCTACTATTGTGATAGTCT+TGG | + | chr3_1:22632451-22632470 | Msa0353040:three_prime_UTR | 35.0% | |
| ACAACACTAGGACGTATAAA+TGG | - | chr3_1:22632483-22632502 | None:intergenic | 35.0% | |
| ATGTTGTCAATTGTGGAATG+CGG | + | chr3_1:22632517-22632536 | Msa0353040:three_prime_UTR | 35.0% | |
| TAGAAGAATCAGGTCTAATC+GGG | - | chr3_1:22632608-22632627 | None:intergenic | 35.0% | |
| GTAGAAGAATCAGGTCTAAT+CGG | - | chr3_1:22632609-22632628 | None:intergenic | 35.0% | |
| TACTCAGTGTTGTCAAATAG+GGG | - | chr3_1:22632658-22632677 | None:intergenic | 35.0% | |
| GATACTCAGTGTTGTCAAAT+AGG | - | chr3_1:22632660-22632679 | None:intergenic | 35.0% | |
| !! | AAGAGTGTGTAGCCTTTTTG+AGG | + | chr3_1:22624184-22624203 | Msa0353040:five_prime_UTR | 40.0% |
| ! | AGAGTGTGTAGCCTTTTTGA+GGG | + | chr3_1:22624185-22624204 | Msa0353040:five_prime_UTR | 40.0% |
| ATCAAACCTTAGGAGAACTC+AGG | + | chr3_1:22624278-22624297 | Msa0353040:five_prime_UTR | 40.0% | |
| TATGTTAGTCGTTGGTCCAA+TGG | - | chr3_1:22624391-22624410 | None:intergenic | 40.0% | |
| ATACATGTAAAGCTGCGTGT+TGG | - | chr3_1:22624590-22624609 | None:intergenic | 40.0% | |
| ! | GCATGACTTGCATTTCCAAT+TGG | + | chr3_1:22624619-22624638 | Msa0353040:intron | 40.0% |
| !! | GTGTGTTTTTGTCAGGCTTT+TGG | - | chr3_1:22624948-22624967 | None:intergenic | 40.0% |
| GGTATTAAATGGAAGCTGAG+TGG | - | chr3_1:22625424-22625443 | None:intergenic | 40.0% | |
| TACTTGTGTACTATGAGGCA+CGG | + | chr3_1:22625657-22625676 | Msa0353040:intron | 40.0% | |
| ! | GTAATTCTATGTGTCGGTGT+CGG | + | chr3_1:22625748-22625767 | Msa0353040:intron | 40.0% |
| ! | TAGCTTCTGTAGGATTTTGG+TGG | + | chr3_1:22625827-22625846 | Msa0353040:intron | 40.0% |
| GTACAAGGTGAATATGGTCA+CGG | - | chr3_1:22625887-22625906 | None:intergenic | 40.0% | |
| GTGACCATATTCACCTTGTA+CGG | + | chr3_1:22625886-22625905 | Msa0353040:intron | 40.0% | |
| CTCTTAACGTAATCCGTACA+AGG | - | chr3_1:22625902-22625921 | None:intergenic | 40.0% | |
| ! | CTTGTACGGATTACGTTAAG+AGG | + | chr3_1:22625900-22625919 | Msa0353040:intron | 40.0% |
| !!! | GAACATGTTTTGGCCTTTCT+GGG | - | chr3_1:22626064-22626083 | None:intergenic | 40.0% |
| TTACTTTCCTCATTCCGTAG+TGG | + | chr3_1:22626102-22626121 | Msa0353040:intron | 40.0% | |
| AAAATGTTAACTAGTGCCCC+CGG | + | chr3_1:22626413-22626432 | Msa0353040:intron | 40.0% | |
| CTTTGACTACACAAGTTCCA+AGG | - | chr3_1:22626474-22626493 | None:intergenic | 40.0% | |
| TGCATACAATATGCAAGGTC+TGG | + | chr3_1:22626910-22626929 | Msa0353040:intron | 40.0% | |
| GCATACAATATGCAAGGTCT+GGG | + | chr3_1:22626911-22626930 | Msa0353040:intron | 40.0% | |
| CATACAATATGCAAGGTCTG+GGG | + | chr3_1:22626912-22626931 | Msa0353040:intron | 40.0% | |
| !!! | CTACCTCTTTTTTTTGGTGG+TGG | - | chr3_1:22626950-22626969 | None:intergenic | 40.0% |
| CACCACCAAAAAAAAGAGGT+AGG | + | chr3_1:22626948-22626967 | Msa0353040:intron | 40.0% | |
| AGTTTCTCGCACGTCATATT+CGG | + | chr3_1:22627256-22627275 | Msa0353040:intron | 40.0% | |
| TCAGGTTAGGCTCATTCTTA+AGG | + | chr3_1:22627893-22627912 | Msa0353040:five_prime_UTR | 40.0% | |
| CAGGTTAGGCTCATTCTTAA+GGG | + | chr3_1:22627894-22627913 | Msa0353040:five_prime_UTR | 40.0% | |
| TACTTTCGATGTGACTCTGA+AGG | + | chr3_1:22628468-22628487 | Msa0353040:intron | 40.0% | |
| ! | ATTACACGGACTATAATCGG+AGG | - | chr3_1:22628535-22628554 | None:intergenic | 40.0% |
| AGGACTAAAACGAAAGAACG+AGG | + | chr3_1:22628678-22628697 | Msa0353040:intron | 40.0% | |
| GGGAATCCATCTTGAATACA+AGG | - | chr3_1:22628798-22628817 | None:intergenic | 40.0% | |
| AGCTTGGTTGAATACAGCAA+TGG | - | chr3_1:22629035-22629054 | None:intergenic | 40.0% | |
| CTGTATTCAACCAAGCTTCA+AGG | + | chr3_1:22629038-22629057 | Msa0353040:CDS | 40.0% | |
| GCAGAAAAGCAGTTCAATGA+AGG | + | chr3_1:22629142-22629161 | Msa0353040:CDS | 40.0% | |
| !! | GCAGTTCAATGAAGGCATTA+AGG | + | chr3_1:22629150-22629169 | Msa0353040:CDS | 40.0% |
| TTGCTTCAAGACATAGAAGC+CGG | + | chr3_1:22629205-22629224 | Msa0353040:CDS | 40.0% | |
| ATGCTGCATAGGATATGAGA+GGG | + | chr3_1:22629448-22629467 | Msa0353040:intron | 40.0% | |
| GAGTGCATTTCATGCATGTT+TGG | + | chr3_1:22629475-22629494 | Msa0353040:intron | 40.0% | |
| !! | GCATCTACCGCATTACTTTT+CGG | + | chr3_1:22629623-22629642 | Msa0353040:CDS | 40.0% |
| AAACCCATTGCACCTAATAG+AGG | - | chr3_1:22629698-22629717 | None:intergenic | 40.0% | |
| CCATGCAAGGAATCTTTAGA+GGG | + | chr3_1:22629914-22629933 | Msa0353040:CDS | 40.0% | |
| CTCCTTTATATGTCATCGGT+AGG | + | chr3_1:22629953-22629972 | Msa0353040:intron | 40.0% | |
| GGATCAAGCAAAATTCTACG+AGG | + | chr3_1:22630152-22630171 | Msa0353040:intron | 40.0% | |
| CTATGGTTGCATTCAGTTTC+CGG | + | chr3_1:22630282-22630301 | Msa0353040:intron | 40.0% | |
| TATGGTTGCATTCAGTTTCC+GGG | + | chr3_1:22630283-22630302 | Msa0353040:intron | 40.0% | |
| ATCTGCAAATCCTTCATGCT+TGG | - | chr3_1:22630555-22630574 | None:intergenic | 40.0% | |
| ! | GACAGTTCAAGTTTCATGCT+AGG | - | chr3_1:22630662-22630681 | None:intergenic | 40.0% |
| ACTGTCCGAGTTTAATCAGA+CGG | + | chr3_1:22630676-22630695 | Msa0353040:intron | 40.0% | |
| CTAGACCGTCTGATTAAACT+CGG | - | chr3_1:22630684-22630703 | None:intergenic | 40.0% | |
| TTAATCAGACGGTCTAGATG+TGG | + | chr3_1:22630687-22630706 | Msa0353040:intron | 40.0% | |
| AAGGTTAGGTCCAATTCCAA+TGG | + | chr3_1:22630918-22630937 | Msa0353040:CDS | 40.0% | |
| TGGTTTAGCTGTTGCAATAC+AGG | + | chr3_1:22630993-22631012 | Msa0353040:CDS | 40.0% | |
| GCTAGAATTGCCTGTGATAA+AGG | - | chr3_1:22631096-22631115 | None:intergenic | 40.0% | |
| AAGTAACTACTGCTGCAACA+AGG | + | chr3_1:22631145-22631164 | Msa0353040:CDS | 40.0% | |
| !! | GTTGGAGGTGGATTATACTT+TGG | + | chr3_1:22631213-22631232 | Msa0353040:CDS | 40.0% |
| TTGTGCTGGGAAAATATACC+GGG | - | chr3_1:22631293-22631312 | None:intergenic | 40.0% | |
| GTTGTGCTGGGAAAATATAC+CGG | - | chr3_1:22631294-22631313 | None:intergenic | 40.0% | |
| CTAATCTATTGCGTTGTGCT+GGG | - | chr3_1:22631306-22631325 | None:intergenic | 40.0% | |
| ACTAATCTATTGCGTTGTGC+TGG | - | chr3_1:22631307-22631326 | None:intergenic | 40.0% | |
| GTTCACACCATCAAAGACAA+AGG | - | chr3_1:22631451-22631470 | None:intergenic | 40.0% | |
| !! | GTCTTTGATGGTGTGAACTA+TGG | + | chr3_1:22631453-22631472 | Msa0353040:CDS | 40.0% |
| CATGCGAAGACTCATATAGA+TGG | - | chr3_1:22631698-22631717 | None:intergenic | 40.0% | |
| ! | AGAACTAGAGTCGTCGATTA+AGG | - | chr3_1:22631983-22632002 | None:intergenic | 40.0% |
| !! | GACGACTCTAGTTCTTAACA+TGG | + | chr3_1:22631988-22632007 | Msa0353040:intron | 40.0% |
| TGTCAAATGCATATGCAGGA+TGG | + | chr3_1:22632272-22632291 | Msa0353040:intron | 40.0% | |
| GTCAAATGCATATGCAGGAT+GGG | + | chr3_1:22632273-22632292 | Msa0353040:intron | 40.0% | |
| ACGATACTGGATACAACACT+AGG | - | chr3_1:22632495-22632514 | None:intergenic | 40.0% | |
| ATTGACAACATGGACGATAC+TGG | - | chr3_1:22632508-22632527 | None:intergenic | 40.0% | |
| ATCGTCCATGTTGTCAATTG+TGG | + | chr3_1:22632510-22632529 | Msa0353040:three_prime_UTR | 40.0% | |
| GCATTCCACAATTGACAACA+TGG | - | chr3_1:22632518-22632537 | None:intergenic | 40.0% | |
| TCTAAGAGTAGGGGAAAGGT+TGG | + | chr3_1:22624215-22624234 | Msa0353040:five_prime_UTR | 45.0% | |
| GGAAGAGAGTGAAGAATGCA+AGG | - | chr3_1:22624247-22624266 | None:intergenic | 45.0% | |
| TGAGCTTAGCTCAGTTGGAA+TGG | + | chr3_1:22625048-22625067 | Msa0353040:intron | 45.0% | |
| CACATCTTTGTCTTTGGTGG+TGG | - | chr3_1:22625115-22625134 | None:intergenic | 45.0% | |
| CAAGAAGTAAAGTACGTGGC+AGG | - | chr3_1:22625583-22625602 | None:intergenic | 45.0% | |
| TGTACTATGAGGCACGGATA+CGG | + | chr3_1:22625663-22625682 | Msa0353040:intron | 45.0% | |
| CCTACAGAAGCTATGAAGCA+CGG | - | chr3_1:22625820-22625839 | None:intergenic | 45.0% | |
| !!! | GGAACATGTTTTGGCCTTTC+TGG | - | chr3_1:22626065-22626084 | None:intergenic | 45.0% |
| AAATGTTAACTAGTGCCCCC+GGG | + | chr3_1:22626414-22626433 | Msa0353040:intron | 45.0% | |
| TGTTTCCTTAACTAGTGCCC+CGG | + | chr3_1:22626542-22626561 | Msa0353040:intron | 45.0% | |
| TCTTGTTAACTAGTGCCTCC+GGG | - | chr3_1:22626563-22626582 | None:intergenic | 45.0% | |
| ! | GTCTTGTTAACTAGTGCCTC+CGG | - | chr3_1:22626564-22626583 | None:intergenic | 45.0% |
| !!! | CTTTTTTTTGGTGGTGGTCG+AGG | - | chr3_1:22626944-22626963 | None:intergenic | 45.0% |
| CGACCACCACCAAAAAAAAG+AGG | + | chr3_1:22626944-22626963 | Msa0353040:intron | 45.0% | |
| !!! | GGCCTACCTCTTTTTTTTGG+TGG | - | chr3_1:22626953-22626972 | None:intergenic | 45.0% |
| TGACGTGCGAGAAACTCATA+GGG | - | chr3_1:22627252-22627271 | None:intergenic | 45.0% | |
| ATGACGTGCGAGAAACTCAT+AGG | - | chr3_1:22627253-22627272 | None:intergenic | 45.0% | |
| ! | CTTGGTAGGTTGTTCAGGTT+AGG | + | chr3_1:22627880-22627899 | Msa0353040:intron | 45.0% |
| CCTGCTCTTCCAAGAAACAA+GGG | - | chr3_1:22628089-22628108 | None:intergenic | 45.0% | |
| ! | CCTTGTTTCTTGGAAGAGCA+GGG | + | chr3_1:22628087-22628106 | Msa0353040:intron | 45.0% |
| ! | TTTCGATGTGACTCTGAAGG+TGG | + | chr3_1:22628471-22628490 | Msa0353040:intron | 45.0% |
| ! | CAAGATGGATTCCCTAGCTA+AGG | + | chr3_1:22628804-22628823 | Msa0353040:CDS | 45.0% |
| TCCCTAGCTAAGGAGATACT+TGG | + | chr3_1:22628814-22628833 | Msa0353040:CDS | 45.0% | |
| CCCAAGTATCTCCTTAGCTA+GGG | - | chr3_1:22628818-22628837 | None:intergenic | 45.0% | |
| CCCTAGCTAAGGAGATACTT+GGG | + | chr3_1:22628815-22628834 | Msa0353040:CDS | 45.0% | |
| TCCCAAGTATCTCCTTAGCT+AGG | - | chr3_1:22628819-22628838 | None:intergenic | 45.0% | |
| ACAGCATTCATAGGCCACTT+AGG | + | chr3_1:22628895-22628914 | Msa0353040:CDS | 45.0% | |
| ! | TTTAATGTGTTTAGGGCCGG+TGG | + | chr3_1:22628988-22629007 | Msa0353040:intron | 45.0% |
| ! | TTTCAAGGTGCCATCCTGTT+TGG | - | chr3_1:22629236-22629255 | None:intergenic | 45.0% |
| !! | CAAAATGACATCGACTCACG+TGG | - | chr3_1:22629390-22629409 | None:intergenic | 45.0% |
| !! | CACGTGAGTCGATGTCATTT+TGG | + | chr3_1:22629388-22629407 | Msa0353040:intron | 45.0% |
| ! | CTTCAGATTGAAGGCGTGTT+CGG | - | chr3_1:22629423-22629442 | None:intergenic | 45.0% |
| ! | GCATCGACACTTCAGATTGA+AGG | - | chr3_1:22629432-22629451 | None:intergenic | 45.0% |
| GATGCTGCATAGGATATGAG+AGG | + | chr3_1:22629447-22629466 | Msa0353040:intron | 45.0% | |
| GACTGTGCCGAAAAGTAATG+CGG | - | chr3_1:22629633-22629652 | None:intergenic | 45.0% | |
| !! | TTACTTTTCGGCACAGTCCT+TGG | + | chr3_1:22629635-22629654 | Msa0353040:CDS | 45.0% |
| AAAGATTCCTTGCATGGCCA+AGG | - | chr3_1:22629911-22629930 | None:intergenic | 45.0% | |
| GCCATGCAAGGAATCTTTAG+AGG | + | chr3_1:22629913-22629932 | Msa0353040:CDS | 45.0% | |
| ! | CCCTCTAAAGATTCCTTGCA+TGG | - | chr3_1:22629917-22629936 | None:intergenic | 45.0% |
| TTTGCTTGATCCGTTAGGGA+TGG | - | chr3_1:22630144-22630163 | None:intergenic | 45.0% | |
| GTATGCATTGAACGTCGCTA+TGG | + | chr3_1:22630305-22630324 | Msa0353040:CDS | 45.0% | |
| ! | CTGAGAGAGCACATGTGAAA+TGG | - | chr3_1:22630376-22630395 | None:intergenic | 45.0% |
| AATCCTTCATGCTTGGAGGT+AGG | - | chr3_1:22630548-22630567 | None:intergenic | 45.0% | |
| TGCAAATCCTTCATGCTTGG+AGG | - | chr3_1:22630552-22630571 | None:intergenic | 45.0% | |
| ACCTAACCTTGCTGCTAATG+AGG | - | chr3_1:22630908-22630927 | None:intergenic | 45.0% | |
| TGGAATGCAGCCATTGGAAT+TGG | - | chr3_1:22630931-22630950 | None:intergenic | 45.0% | |
| ATGATGTCATCCAAACCTGG+AGG | - | chr3_1:22630960-22630979 | None:intergenic | 45.0% | |
| AGCTAAACCATCGGCAAGAA+GGG | - | chr3_1:22630983-22631002 | None:intergenic | 45.0% | |
| GTTGGACTCTCTCTAGTAGT+TGG | + | chr3_1:22631195-22631214 | Msa0353040:CDS | 45.0% | |
| !! | GGTGGATTATACTTTGGAGC+CGG | + | chr3_1:22631219-22631238 | Msa0353040:CDS | 45.0% |
| CGCTTATTCTGCATACTCCT+TGG | + | chr3_1:22631488-22631507 | Msa0353040:CDS | 45.0% | |
| ATGAGTCTTCGCATGTTTGC+TGG | + | chr3_1:22631703-22631722 | Msa0353040:CDS | 45.0% | |
| ! | TTCGCATGTTTGCTGGTGTA+TGG | + | chr3_1:22631710-22631729 | Msa0353040:CDS | 45.0% |
| ! | TCGTCGATTAAGGCCATGTT+AGG | - | chr3_1:22631973-22631992 | None:intergenic | 45.0% |
| CGATGTGATCGAGATGTTCT+TGG | - | chr3_1:22632136-22632155 | None:intergenic | 45.0% | |
| GACCTGATTCTTCTACGCTA+TGG | + | chr3_1:22632613-22632632 | Msa0353040:three_prime_UTR | 45.0% | |
| TGCCATAGCGTAGAAGAATC+AGG | - | chr3_1:22632618-22632637 | None:intergenic | 45.0% | |
| !!! | ATTTACTTTTTTTTTTTTAA+GGG | + | chr3_1:22624750-22624769 | Msa0353040:intron | 5.0% |
| !!! | TTATTTTTAAATATATTAGA+TGG | + | chr3_1:22624824-22624843 | Msa0353040:intron | 5.0% |
| !!! | TTTAGTTTTATTTTTATTTT+TGG | - | chr3_1:22624902-22624921 | None:intergenic | 5.0% |
| !!! | ATATTTAAAACAAATTTATA+TGG | - | chr3_1:22626261-22626280 | None:intergenic | 5.0% |
| !! | ATACTTTATAATTTAATTAA+GGG | - | chr3_1:22626586-22626605 | None:intergenic | 5.0% |
| !! | TATACTTTATAATTTAATTA+AGG | - | chr3_1:22626587-22626606 | None:intergenic | 5.0% |
| !!! | ATATATTTTTATAGAAAATA+TGG | - | chr3_1:22628369-22628388 | None:intergenic | 5.0% |
| GGCATACCTGAGTTCTCCTA+AGG | - | chr3_1:22624287-22624306 | None:intergenic | 50.0% | |
| !! | TTTGTCTTTGGTGGTGGCCA+GGG | - | chr3_1:22625109-22625128 | None:intergenic | 50.0% |
| ACACGACACGTGTCTGACAT+GGG | + | chr3_1:22625771-22625790 | Msa0353040:intron | 50.0% | |
| CCGTGCTTCATAGCTTCTGT+AGG | + | chr3_1:22625817-22625836 | Msa0353040:intron | 50.0% | |
| CAAGGTGAATATGGTCACGG+TGG | - | chr3_1:22625884-22625903 | None:intergenic | 50.0% | |
| AATGTTAACTAGTGCCCCCG+GGG | + | chr3_1:22626415-22626434 | Msa0353040:intron | 50.0% | |
| CTTGTTAACTAGTGCCTCCG+GGG | - | chr3_1:22626562-22626581 | None:intergenic | 50.0% | |
| CCAATTGAGCTAAGCTCACG+AGG | - | chr3_1:22626881-22626900 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAGCTCAAT+TGG | + | chr3_1:22626878-22626897 | Msa0353040:intron | 50.0% | |
| CTCGTGCGTCCTATGTAGTT+CGG | - | chr3_1:22627356-22627375 | None:intergenic | 50.0% | |
| ! | GTTACTGTCAAGGGGGTGTA+TGG | + | chr3_1:22627414-22627433 | Msa0353040:intron | 50.0% |
| ! | TCAAGGGGGTGTATGGAACT+GGG | + | chr3_1:22627421-22627440 | Msa0353040:intron | 50.0% |
| CTGGGGAAGGCTCTTGAATT+AGG | + | chr3_1:22627439-22627458 | Msa0353040:intron | 50.0% | |
| ! | CCCTTGTTTCTTGGAAGAGC+AGG | + | chr3_1:22628086-22628105 | Msa0353040:intron | 50.0% |
| CCCTGCTCTTCCAAGAAACA+AGG | - | chr3_1:22628090-22628109 | None:intergenic | 50.0% | |
| !! | CTGAAGTGTCGATGCTGCAT+AGG | + | chr3_1:22629437-22629456 | Msa0353040:intron | 50.0% |
| ! | TTAACAGCTGGGGCTAGCAT+AGG | - | chr3_1:22629844-22629863 | None:intergenic | 50.0% |
| AGCGACGTTCAATGCATACC+CGG | - | chr3_1:22630304-22630323 | None:intergenic | 50.0% | |
| TCTCCTACCTCCAAGCATGA+AGG | + | chr3_1:22630542-22630561 | Msa0353040:CDS | 50.0% | |
| TGCTGCTAATGAGGCCGATA+AGG | - | chr3_1:22630899-22630918 | None:intergenic | 50.0% | |
| TATCGGCCTCATTAGCAGCA+AGG | + | chr3_1:22630899-22630918 | Msa0353040:CDS | 50.0% | |
| GCCTCATTAGCAGCAAGGTT+AGG | + | chr3_1:22630904-22630923 | Msa0353040:CDS | 50.0% | |
| ! | CAGGTTTGGAATGCAGCCAT+TGG | - | chr3_1:22630937-22630956 | None:intergenic | 50.0% |
| GGGATGATGTCATCCAAACC+TGG | - | chr3_1:22630963-22630982 | None:intergenic | 50.0% | |
| ACATCATCCCTTCTTGCCGA+TGG | + | chr3_1:22630973-22630992 | Msa0353040:CDS | 50.0% | |
| CAGCTAAACCATCGGCAAGA+AGG | - | chr3_1:22630984-22631003 | None:intergenic | 50.0% | |
| GGACTCTCTCTAGTAGTTGG+AGG | + | chr3_1:22631198-22631217 | Msa0353040:CDS | 50.0% | |
| CTCTCTCTAGTAGTTGGAGG+TGG | + | chr3_1:22631201-22631220 | Msa0353040:CDS | 50.0% | |
| TGCTGGGAAAATATACCGGG+AGG | - | chr3_1:22631290-22631309 | None:intergenic | 50.0% | |
| ! | GCATGTTTGCTGGTGTATGG+AGG | + | chr3_1:22631713-22631732 | Msa0353040:CDS | 50.0% |
| TGCATATGCAGGATGGGAAC+AGG | + | chr3_1:22632279-22632298 | Msa0353040:intron | 50.0% | |
| AGAGGCCACACATTGTCTTG+AGG | + | chr3_1:22632324-22632343 | Msa0353040:CDS | 50.0% | |
| GTTACTCGGAAGTCGGCCAT+TGG | + | chr3_1:22624372-22624391 | Msa0353040:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr3_1:22625046-22625065 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr3_1:22625043-22625062 | Msa0353040:intron | 55.0% | |
| ! | AAGGTCTGGGGTTCAAACCC+TGG | + | chr3_1:22625089-22625108 | Msa0353040:intron | 55.0% |
| !! | CTTTGTCTTTGGTGGTGGCC+AGG | - | chr3_1:22625110-22625129 | None:intergenic | 55.0% |
| GACACGACACGTGTCTGACA+TGG | + | chr3_1:22625770-22625789 | Msa0353040:intron | 55.0% | |
| CACGACACGTGTCTGACATG+GGG | + | chr3_1:22625772-22625791 | Msa0353040:intron | 55.0% | |
| ! | ATGGGGACACGCCTTATTCG+AGG | + | chr3_1:22625789-22625808 | Msa0353040:intron | 55.0% |
| GCACGGACACTCCTCGAATA+AGG | - | chr3_1:22625803-22625822 | None:intergenic | 55.0% | |
| TTTCCTTAACCAGTGCCCCG+GGG | - | chr3_1:22626433-22626452 | None:intergenic | 55.0% | |
| GTTTCCTTAACCAGTGCCCC+GGG | - | chr3_1:22626434-22626453 | None:intergenic | 55.0% | |
| GGTTTCCTTAACCAGTGCCC+CGG | - | chr3_1:22626435-22626454 | None:intergenic | 55.0% | |
| TTCCTTAACTAGTGCCCCGG+AGG | + | chr3_1:22626545-22626564 | Msa0353040:intron | 55.0% | |
| ! | GTCAAGGGGGTGTATGGAAC+TGG | + | chr3_1:22627420-22627439 | Msa0353040:intron | 55.0% |
| ! | CAAGGGGGTGTATGGAACTG+GGG | + | chr3_1:22627422-22627441 | Msa0353040:intron | 55.0% |
| GCAGCAACAGCAAGTGCAGA+TGG | - | chr3_1:22628850-22628869 | None:intergenic | 55.0% | |
| ! | TTTAGGGCCGGTGGAACTTG+CGG | + | chr3_1:22628997-22629016 | Msa0353040:intron | 55.0% |
| AGAAGCCGGTGCAACCAAAC+AGG | + | chr3_1:22629219-22629238 | Msa0353040:CDS | 55.0% | |
| GCCATCCTGTTTGGTTGCAC+CGG | - | chr3_1:22629227-22629246 | None:intergenic | 55.0% | |
| !! | AAGCACTGCAGGAGCACCTA+AGG | - | chr3_1:22629884-22629903 | None:intergenic | 55.0% |
| TCCTGCAGTGCTTCTCTCCT+TGG | + | chr3_1:22629891-22629910 | Msa0353040:CDS | 55.0% | |
| CTTCTCTCCTTGGCCATGCA+AGG | + | chr3_1:22629901-22629920 | Msa0353040:CDS | 55.0% | |
| TGCATTCCAAACCTGCCTCC+AGG | + | chr3_1:22630942-22630961 | Msa0353040:CDS | 55.0% | |
| TCCAAACCTGCCTCCAGGTT+TGG | + | chr3_1:22630947-22630966 | Msa0353040:CDS | 55.0% | |
| TCCAAACCTGGAGGCAGGTT+TGG | - | chr3_1:22630951-22630970 | None:intergenic | 55.0% | |
| TGTCATCCAAACCTGGAGGC+AGG | - | chr3_1:22630956-22630975 | None:intergenic | 55.0% | |
| CCTAATCAGACTAGGCCTCC+CGG | + | chr3_1:22631272-22631291 | Msa0353040:CDS | 55.0% | |
| TGCAGGATGGGAACAGGAAC+AGG | + | chr3_1:22632285-22632304 | Msa0353040:intron | 55.0% | |
| ! | TGGCCTCTGAGAAAACGCCA+GGG | - | chr3_1:22632312-22632331 | None:intergenic | 55.0% |
| GCACGGATACGGACACGACA+CGG | + | chr3_1:22625674-22625693 | Msa0353040:intron | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | - | chr3_1:22626432-22626451 | None:intergenic | 60.0% | |
| ! | TGCCTCCGGGGCACTAGTTA+AGG | - | chr3_1:22626550-22626569 | None:intergenic | 60.0% |
| GGGGTGTATGGAACTGGGGA+AGG | + | chr3_1:22627426-22627445 | Msa0353040:intron | 60.0% | |
| GCCGGTGCAACCAAACAGGA+TGG | + | chr3_1:22629223-22629242 | Msa0353040:CDS | 60.0% | |
| !! | GCCAAGGAGAGAAGCACTGC+AGG | - | chr3_1:22629895-22629914 | None:intergenic | 60.0% |
| CCGGGAGGCCTAGTCTGATT+AGG | - | chr3_1:22631275-22631294 | None:intergenic | 60.0% | |
| TGGGAACAGGAACAGGACCC+TGG | + | chr3_1:22632292-22632311 | Msa0353040:CDS | 60.0% | |
| ! | GGACCCTGGCGTTTTCTCAG+AGG | + | chr3_1:22632306-22632325 | Msa0353040:CDS | 60.0% |
| ! | GTGGCCTCTGAGAAAACGCC+AGG | - | chr3_1:22632313-22632332 | None:intergenic | 60.0% |
| AACTAGTGCCCCCGGGGCAC+TGG | + | chr3_1:22626421-22626440 | Msa0353040:intron | 70.0% | |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr3_1:22626427-22626446 | Msa0353040:intron | 70.0% |
| AGGGCCGGTGGAACTTGCGG+CGG | + | chr3_1:22629000-22629019 | Msa0353040:intron | 70.0% | |
| CCTGCCGCCGCAAGTTCCAC+CGG | - | chr3_1:22629007-22629026 | None:intergenic | 70.0% | |
| CCGGTGGAACTTGCGGCGGC+AGG | + | chr3_1:22629004-22629023 | Msa0353040:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 22624160 | 22632880 | 22624160 | ID=Msa0353040;Name=Msa0353040 |
| chr3_1 | mRNA | 22624160 | 22632880 | 22624160 | ID=Msa0353040-mRNA-1;Parent=Msa0353040;Name=Msa0353040-mRNA-1;_AED=0.09;_eAED=0.09;_QI=227|1|1|1|0.91|0.84|13|536|544 |
| chr3_1 | exon | 22624160 | 22624299 | 22624160 | ID=Msa0353040-mRNA-1:exon:5103;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22627888 | 22628054 | 22627888 | ID=Msa0353040-mRNA-1:exon:5104;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22628795 | 22628916 | 22628795 | ID=Msa0353040-mRNA-1:exon:5105;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22629002 | 22629277 | 22629002 | ID=Msa0353040-mRNA-1:exon:5106;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22629528 | 22629724 | 22629528 | ID=Msa0353040-mRNA-1:exon:5107;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22629835 | 22629970 | 22629835 | ID=Msa0353040-mRNA-1:exon:5108;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22630298 | 22630394 | 22630298 | ID=Msa0353040-mRNA-1:exon:5109;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22630494 | 22630594 | 22630494 | ID=Msa0353040-mRNA-1:exon:5110;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22630851 | 22631014 | 22630851 | ID=Msa0353040-mRNA-1:exon:5111;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22631105 | 22631293 | 22631105 | ID=Msa0353040-mRNA-1:exon:5112;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22631414 | 22631509 | 22631414 | ID=Msa0353040-mRNA-1:exon:5113;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22631613 | 22631734 | 22631613 | ID=Msa0353040-mRNA-1:exon:5114;Parent=Msa0353040-mRNA-1 |
| chr3_1 | exon | 22632290 | 22632880 | 22632290 | ID=Msa0353040-mRNA-1:exon:5115;Parent=Msa0353040-mRNA-1 |
| chr3_1 | five_prime_UTR | 22624160 | 22624299 | 22624160 | ID=Msa0353040-mRNA-1:five_prime_utr;Parent=Msa0353040-mRNA-1 |
| chr3_1 | five_prime_UTR | 22627888 | 22627974 | 22627888 | ID=Msa0353040-mRNA-1:five_prime_utr;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22627975 | 22628054 | 22627975 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22628795 | 22628916 | 22628795 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22629002 | 22629277 | 22629002 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22629528 | 22629724 | 22629528 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22629835 | 22629970 | 22629835 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22630298 | 22630394 | 22630298 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22630494 | 22630594 | 22630494 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22630851 | 22631014 | 22630851 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22631105 | 22631293 | 22631105 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22631414 | 22631509 | 22631414 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22631613 | 22631734 | 22631613 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | CDS | 22632290 | 22632344 | 22632290 | ID=Msa0353040-mRNA-1:cds;Parent=Msa0353040-mRNA-1 |
| chr3_1 | three_prime_UTR | 22632345 | 22632880 | 22632345 | ID=Msa0353040-mRNA-1:three_prime_utr;Parent=Msa0353040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
