Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443820 | KAF1896713.1 | 72.912 | 491 | 113 | 3 | 1 | 478 | 1 | 484 | 0.0 | 707 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443820 | sp|Q9SYD6|DTX42_ARATH | 50.278 | 539 | 176 | 8 | 1 | 473 | 2 | 514 | 1.01e-155 | 455 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443820 | A0A6A5PHC7 | 72.912 | 491 | 113 | 3 | 1 | 478 | 1 | 484 | 0.0 | 707 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046800 | Msa0443820 | -0.803206 | 3.893974e-49 | -8.615850e-47 |
| Msa0056910 | Msa0443820 | 0.838889 | 2.199062e-57 | -8.615850e-47 |
| Msa0136090 | Msa0443820 | 0.810517 | 1.108067e-50 | -8.615850e-47 |
| Msa0191180 | Msa0443820 | -0.802781 | 4.766140e-49 | -8.615850e-47 |
| Msa0198280 | Msa0443820 | -0.802416 | 5.668561e-49 | -8.615850e-47 |
| Msa0216390 | Msa0443820 | -0.811599 | 6.459542e-51 | -8.615850e-47 |
| Msa0400060 | Msa0443820 | 0.835400 | 1.715413e-56 | -8.615850e-47 |
| Msa0422250 | Msa0443820 | 0.821570 | 3.763854e-53 | -8.615850e-47 |
| Msa0441670 | Msa0443820 | -0.812918 | 3.328514e-51 | -8.615850e-47 |
| Msa0443820 | Msa0480430 | -0.809954 | 1.465692e-50 | -8.615850e-47 |
| Msa0443820 | Msa0494750 | 0.852517 | 4.381928e-61 | -8.615850e-47 |
| Msa0443820 | Msa0503220 | 0.821833 | 3.271619e-53 | -8.615850e-47 |
| Msa0443820 | Msa0515730 | -0.800260 | 1.566673e-48 | -8.615850e-47 |
| Msa0443820 | Msa0524960 | -0.807538 | 4.812741e-50 | -8.615850e-47 |
| Msa0443820 | Msa0602360 | -0.810588 | 1.070015e-50 | -8.615850e-47 |
| Msa0443820 | Msa0619450 | -0.807158 | 5.794665e-50 | -8.615850e-47 |
| Msa0443820 | Msa0619530 | -0.806858 | 6.705781e-50 | -8.615850e-47 |
| Msa0443820 | Msa0619960 | -0.806154 | 9.440913e-50 | -8.615850e-47 |
| Msa0443820 | Msa0620050 | -0.807756 | 4.327059e-50 | -8.615850e-47 |
| Msa0443820 | Msa0659580 | -0.807906 | 4.020273e-50 | -8.615850e-47 |
| Msa0443820 | Msa0683610 | -0.834255 | 3.331407e-56 | -8.615850e-47 |
| Msa0443820 | Msa0693150 | -0.807336 | 5.312510e-50 | -8.615850e-47 |
| Msa0443820 | Msa0713570 | -0.803565 | 3.281280e-49 | -8.615850e-47 |
| Msa0443820 | Msa0729130 | -0.817597 | 3.036969e-52 | -8.615850e-47 |
| Msa0443820 | Msa0755550 | -0.804232 | 2.384186e-49 | -8.615850e-47 |
| Msa0443820 | Msa0835050 | -0.800319 | 1.523807e-48 | -8.615850e-47 |
| Msa0443820 | Msa0866320 | -0.815992 | 6.956422e-52 | -8.615850e-47 |
| Msa0443820 | Msa1033250 | -0.810940 | 8.976878e-51 | -8.615850e-47 |
| Msa0443820 | Msa1072850 | -0.816233 | 6.146622e-52 | -8.615850e-47 |
| Msa0443820 | Msa1074980 | -0.811505 | 6.769223e-51 | -8.615850e-47 |
| Msa0443820 | Msa1076120 | -0.822011 | 2.976053e-53 | -8.615850e-47 |
| Msa0443820 | Msa1076530 | -0.812382 | 4.360294e-51 | -8.615850e-47 |
| Msa0443820 | Msa1090180 | 0.801575 | 8.441628e-49 | -8.615850e-47 |
| Msa0443820 | Msa1128200 | -0.836454 | 9.268836e-57 | -8.615850e-47 |
| Msa0443820 | Msa1129510 | -0.806851 | 6.730244e-50 | -8.615850e-47 |
| Msa0443820 | Msa1143080 | 0.818284 | 2.123992e-52 | -8.615850e-47 |
| Msa0443820 | Msa1163230 | -0.814536 | 1.465670e-51 | -8.615850e-47 |
| Msa0443820 | Msa1191960 | -0.817351 | 3.449078e-52 | -8.615850e-47 |
| Msa0443820 | Msa1222900 | -0.805796 | 1.122738e-49 | -8.615850e-47 |
| Msa0443820 | Msa1286850 | 0.802271 | 6.071567e-49 | -8.615850e-47 |
| Msa0443820 | Msa1306220 | 0.801990 | 6.936491e-49 | -8.615850e-47 |
| Msa0443820 | Msa1312800 | -0.817055 | 4.021523e-52 | -8.615850e-47 |
| Msa0443820 | Msa1312840 | -0.813886 | 2.039636e-51 | -8.615850e-47 |
| Msa0443820 | Msa1400830 | -0.804838 | 1.782364e-49 | -8.615850e-47 |
| Msa0443820 | Msa1403820 | -0.818998 | 1.462609e-52 | -8.615850e-47 |
| Msa0443820 | Msa1452560 | -0.807015 | 6.212875e-50 | -8.615850e-47 |
| Msa0255770 | Msa0443820 | -0.811767 | 5.936701e-51 | -8.615850e-47 |
| Msa0306160 | Msa0443820 | -0.801929 | 7.140885e-49 | -8.615850e-47 |
| Msa0343260 | Msa0443820 | 0.818271 | 2.137982e-52 | -8.615850e-47 |
| Msa0353040 | Msa0443820 | 0.805645 | 1.207633e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443820 | MtrunA17_Chr3g0088471 | 96.296 | 270 | 6 | 1 | 1 | 270 | 1 | 266 | 1.57e-180 | 516 |
| Msa0443820 | MtrunA17_Chr3g0088471 | 93.722 | 223 | 6 | 1 | 256 | 478 | 326 | 540 | 1.02e-142 | 420 |
| Msa0443820 | MtrunA17_Chr8g0352151 | 53.393 | 560 | 167 | 13 | 1 | 474 | 1 | 552 | 1.40e-178 | 511 |
| Msa0443820 | MtrunA17_Chr8g0352171 | 75.676 | 222 | 46 | 1 | 256 | 477 | 178 | 391 | 7.74e-118 | 351 |
| Msa0443820 | MtrunA17_Chr8g0352171 | 72.973 | 111 | 30 | 0 | 160 | 270 | 8 | 118 | 2.39e-40 | 149 |
| Msa0443820 | MtrunA17_Chr2g0328761 | 67.488 | 203 | 66 | 0 | 271 | 473 | 304 | 506 | 3.01e-86 | 273 |
| Msa0443820 | MtrunA17_Chr2g0328761 | 54.510 | 255 | 78 | 3 | 17 | 268 | 16 | 235 | 1.42e-77 | 251 |
| Msa0443820 | MtrunA17_Chr7g0243421 | 45.366 | 205 | 100 | 4 | 271 | 469 | 69 | 267 | 5.75e-50 | 172 |
| Msa0443820 | MtrunA17_Chr5g0448591 | 40.887 | 203 | 120 | 0 | 271 | 473 | 347 | 549 | 4.56e-47 | 171 |
| Msa0443820 | MtrunA17_Chr5g0448591 | 32.917 | 240 | 94 | 5 | 32 | 271 | 109 | 281 | 1.78e-25 | 109 |
| Msa0443820 | MtrunA17_Chr8g0352161 | 57.292 | 96 | 38 | 1 | 67 | 162 | 3 | 95 | 5.36e-25 | 100 |
| Msa0443820 | MtrunA17_Chr7g0243411 | 62.821 | 78 | 29 | 0 | 30 | 107 | 110 | 187 | 3.62e-18 | 85.5 |
| Msa0443820 | MtrunA17_Chr7g0243411 | 43.182 | 88 | 50 | 0 | 184 | 271 | 204 | 291 | 2.62e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0443820 | AT1G51340.3 | 50.278 | 539 | 176 | 8 | 1 | 473 | 2 | 514 | 1.03e-156 | 455 |
| Msa0443820 | AT1G51340.5 | 50.278 | 539 | 176 | 8 | 1 | 473 | 2 | 514 | 1.03e-156 | 455 |
| Msa0443820 | AT1G51340.2 | 50.278 | 539 | 176 | 8 | 1 | 473 | 2 | 514 | 1.03e-156 | 455 |
| Msa0443820 | AT1G51340.1 | 51.468 | 511 | 160 | 7 | 29 | 473 | 20 | 508 | 1.58e-152 | 444 |
| Msa0443820 | AT3G08040.2 | 73.659 | 205 | 54 | 0 | 271 | 475 | 212 | 416 | 2.00e-102 | 313 |
| Msa0443820 | AT3G08040.1 | 73.659 | 205 | 54 | 0 | 271 | 475 | 316 | 520 | 2.73e-101 | 313 |
| Msa0443820 | AT1G51340.4 | 46.506 | 415 | 130 | 8 | 1 | 349 | 2 | 390 | 3.81e-93 | 288 |
| Msa0443820 | AT4G38380.4 | 42.927 | 205 | 113 | 2 | 271 | 473 | 241 | 443 | 2.46e-46 | 167 |
| Msa0443820 | AT4G38380.4 | 35.652 | 230 | 92 | 4 | 42 | 271 | 2 | 175 | 3.26e-33 | 131 |
| Msa0443820 | AT4G38380.2 | 42.927 | 205 | 113 | 2 | 271 | 473 | 351 | 553 | 3.48e-46 | 169 |
| Msa0443820 | AT4G38380.2 | 35.021 | 237 | 98 | 4 | 35 | 271 | 105 | 285 | 1.37e-33 | 134 |
| Msa0443820 | AT4G38380.1 | 42.927 | 205 | 113 | 2 | 271 | 473 | 351 | 553 | 3.48e-46 | 169 |
| Msa0443820 | AT4G38380.1 | 35.021 | 237 | 98 | 4 | 35 | 271 | 105 | 285 | 1.37e-33 | 134 |
| Msa0443820 | AT4G38380.3 | 42.927 | 205 | 113 | 2 | 271 | 473 | 279 | 481 | 4.76e-46 | 167 |
| Msa0443820 | AT4G38380.3 | 35.021 | 237 | 98 | 4 | 35 | 271 | 33 | 213 | 3.97e-34 | 134 |
| Msa0443820 | AT4G38380.5 | 42.927 | 205 | 113 | 2 | 271 | 473 | 341 | 543 | 4.96e-46 | 168 |
| Msa0443820 | AT4G38380.5 | 49.425 | 87 | 44 | 0 | 185 | 271 | 189 | 275 | 5.02e-19 | 90.5 |
| Msa0443820 | AT4G38380.5 | 45.714 | 70 | 38 | 0 | 35 | 104 | 105 | 174 | 4.57e-12 | 68.6 |
| Msa0443820 | AT2G38330.1 | 41.176 | 204 | 116 | 2 | 271 | 472 | 312 | 513 | 1.48e-43 | 161 |
| Msa0443820 | AT2G38330.1 | 38.683 | 243 | 82 | 4 | 38 | 279 | 79 | 255 | 5.19e-33 | 131 |
Find 137 sgRNAs with CRISPR-Local
Find 507 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATACTCAGTGTTGTCAAAT+AGG | 0.247790 | 3_3:-15893839 | None:intergenic |
| TCATTAGCCTTTGTCTTTGA+TGG | 0.249674 | 3_3:+15892638 | Msa0443820:CDS |
| GAGTTGTTATCAAAAGATTT+AGG | 0.265569 | 3_3:+15888574 | Msa0443820:five_prime_UTR |
| GTCTTTGATGGTGTGAACTA+TGG | 0.289357 | 3_3:+15892650 | Msa0443820:CDS |
| TTTGCAGCTAAACCTCTATT+AGG | 0.292824 | 3_3:+15890596 | Msa0443820:CDS |
| GAGGTTTAGCTGCAAATATA+AGG | 0.308083 | 3_3:-15890589 | None:intergenic |
| TCCTGCAGTGCTTCTCTCCT+TGG | 0.308788 | 3_3:+15890804 | Msa0443820:CDS |
| ATGTGCCTCTTCTTCCTAAT+AGG | 0.311820 | 3_3:-15890506 | None:intergenic |
| AATACTGACCAAAGGGAAAA+TGG | 0.321677 | 3_3:-15889993 | None:intergenic |
| TCCAAACCTGGAGGCATGTT+TGG | 0.321814 | 3_3:-15892146 | None:intergenic |
| CTTGACAACATTGACGATAC+TGG | 0.327527 | 3_3:-15893648 | None:intergenic |
| TAAGGGTTGCAGCTTGAATA+AGG | 0.333331 | 3_3:-15890571 | None:intergenic |
| TCCAAACATGCCTCCAGGTT+TGG | 0.334472 | 3_3:+15892145 | Msa0443820:CDS |
| ACGACACTAGCACGTATAAA+TGG | 0.334483 | 3_3:-15893623 | None:intergenic |
| TCAGGTTAGGCTCATTCTTA+AGG | 0.341953 | 3_3:+15888520 | Msa0443820:five_prime_UTR |
| AAGGTTTGATCTTGACTTGT+AGG | 0.349663 | 3_3:-15884890 | None:intergenic |
| TTTCAAGGTACTATCCTGTT+TGG | 0.352004 | 3_3:-15890161 | None:intergenic |
| TGGAATGCCGCCATTGGAAT+TGG | 0.352025 | 3_3:-15892126 | None:intergenic |
| ATTCTTTCTCTACAAGAGTA+AGG | 0.359214 | 3_3:+15892840 | Msa0443820:CDS |
| ATGAGTCTTCGCATGTTTGC+TGG | 0.360088 | 3_3:+15892898 | Msa0443820:CDS |
| ATACTCAGTGTTGTCAAATA+GGG | 0.365604 | 3_3:-15893838 | None:intergenic |
| GCCATGCAAGGAATCTTTAG+AGG | 0.376294 | 3_3:+15890826 | Msa0443820:CDS |
| CAGGTTAGGCTCATTCTTAA+GGG | 0.377608 | 3_3:+15888521 | Msa0443820:five_prime_UTR |
| AGAGTGAGTCAAAACCTATT+AGG | 0.380986 | 3_3:+15890492 | Msa0443820:CDS |
| CTTGGTAGGTTGTTCAGGTT+AGG | 0.385269 | 3_3:+15888507 | Msa0443820:intron |
| TTTGCTATTGATTCTATCAA+TGG | 0.385452 | 3_3:-15890044 | None:intergenic |
| TGGTTTAGCTGTTGCAATAC+AGG | 0.386667 | 3_3:+15892191 | Msa0443820:CDS |
| CTGTATTCAACCAAGCTTCA+AGG | 0.387444 | 3_3:+15889966 | Msa0443820:CDS |
| ATATACTTGGTAGGTTGTTC+AGG | 0.395469 | 3_3:+15888502 | Msa0443820:intron |
| CGCTTATTCTGCATACTCCT+TGG | 0.398929 | 3_3:+15892685 | Msa0443820:CDS |
| AACCTACCGATGACATATAA+AGG | 0.398982 | 3_3:-15890868 | None:intergenic |
| GTAGAAGAATCAGGTCTAAT+CGG | 0.404981 | 3_3:-15893788 | None:intergenic |
| TTCGCATGTTTGCTGGTGTA+TGG | 0.406622 | 3_3:+15892905 | Msa0443820:CDS |
| TGCAGGATGGGAACAGGAAC+AGG | 0.408714 | 3_3:+15893427 | Msa0443820:intron |
| TCAAAAGATTTAGGATATCA+TGG | 0.413001 | 3_3:+15888583 | Msa0443820:exon |
| CTTATAGACACAGCATTCAT+AGG | 0.413657 | 3_3:+15889568 | Msa0443820:CDS |
| ACCTCATCTCTTCTCGCTGA+TGG | 0.416323 | 3_3:+15892171 | Msa0443820:CDS |
| ACAAAGGCTAATGAATTGAT+TGG | 0.419858 | 3_3:-15892629 | None:intergenic |
| TGCTGCTAATGAGGCTGATA+AGG | 0.420820 | 3_3:-15892094 | None:intergenic |
| TTCAATAGGTGGTCTATTGT+TGG | 0.424542 | 3_3:+15892041 | Msa0443820:intron |
| TGCATATGCAGGATGGGAAC+AGG | 0.431882 | 3_3:+15893421 | Msa0443820:intron |
| CCGGGAGGCCTAGTCTGATT+AGG | 0.440861 | 3_3:-15892470 | None:intergenic |
| TAGGATATCATGGAAGATAA+TGG | 0.443090 | 3_3:+15888593 | Msa0443820:exon |
| AAACCCATTGCACCTAATAG+AGG | 0.448781 | 3_3:-15890608 | None:intergenic |
| AATCTTAAGTACTTAACAGC+TGG | 0.450245 | 3_3:-15890766 | None:intergenic |
| CCGGTCGAACTTGCGGCGGC+AGG | 0.453774 | 3_3:+15889932 | Msa0443820:CDS |
| TCTTGAAGCAAATGATCATC+AGG | 0.455615 | 3_3:-15890121 | None:intergenic |
| TACTTAAGATTGAGAGCCTT+AGG | 0.458860 | 3_3:+15890778 | Msa0443820:CDS |
| GCAGTTCAATGAAAGCATTA+AGG | 0.461480 | 3_3:+15890078 | Msa0443820:CDS |
| AAACCTCTATTAGGTGCAAT+GGG | 0.462124 | 3_3:+15890605 | Msa0443820:CDS |
| GTTGGAGGTGGATTATACTT+TGG | 0.465967 | 3_3:+15892411 | Msa0443820:CDS |
| AGAAGCAGGTGCAACCAAAC+AGG | 0.466060 | 3_3:+15890147 | Msa0443820:CDS |
| AGGTTTAGCTGCAAATATAA+GGG | 0.468515 | 3_3:-15890588 | None:intergenic |
| GCCAAGGAGAGAAGCACTGC+AGG | 0.469082 | 3_3:-15890805 | None:intergenic |
| CTCTCTCTAGTAGTTGGAGG+TGG | 0.470542 | 3_3:+15892399 | Msa0443820:CDS |
| CATGCGAAGACTCATATAGA+TGG | 0.476251 | 3_3:-15892890 | None:intergenic |
| TGCCATAGCGTAGAAGAATC+AGG | 0.477013 | 3_3:-15893797 | None:intergenic |
| CATGTTTGGAATGCCGCCAT+TGG | 0.477319 | 3_3:-15892132 | None:intergenic |
| GCAGCAACAGCAAGTGCAGA+TGG | 0.480634 | 3_3:-15889529 | None:intergenic |
| TAAACCTCTATTAGGTGCAA+TGG | 0.484001 | 3_3:+15890604 | Msa0443820:CDS |
| TCTAAGAGTAGGGGAAAGGT+TGG | 0.485105 | 3_3:+15884840 | Msa0443820:five_prime_UTR |
| GTGGCCTCTGAGAAAACGCC+AGG | 0.490069 | 3_3:-15893452 | None:intergenic |
| ATTATAGTCTTTCTCAGCAA+AGG | 0.493012 | 3_3:-15892319 | None:intergenic |
| GCCTCATTAGCAGCAAGGTT+AGG | 0.495494 | 3_3:+15892102 | Msa0443820:CDS |
| GTTGGACTCTCTCTAGTAGT+TGG | 0.497300 | 3_3:+15892393 | Msa0443820:CDS |
| AAGCACTGCAGGAGCACCTA+AGG | 0.498166 | 3_3:-15890794 | None:intergenic |
| TCCCTAGCTAAGGAGATACT+TGG | 0.498581 | 3_3:+15889496 | Msa0443820:CDS |
| GGCATACCTGAGTTCTCCTA+AGG | 0.499583 | 3_3:-15884909 | None:intergenic |
| ACAAGTCAAGATCAAACCTT+AGG | 0.503774 | 3_3:+15884893 | Msa0443820:five_prime_UTR |
| TAGAAGAATCAGGTCTAATC+GGG | 0.506914 | 3_3:-15893787 | None:intergenic |
| AAGATTATTCTTCAAGCTGT+CGG | 0.508803 | 3_3:+15893924 | Msa0443820:three_prime_UTR |
| GGACTCTCTCTAGTAGTTGG+AGG | 0.514348 | 3_3:+15892396 | Msa0443820:CDS |
| GGCATTCCAAACATGCCTCC+AGG | 0.515321 | 3_3:+15892140 | Msa0443820:CDS |
| GACCTGATTCTTCTACGCTA+TGG | 0.515432 | 3_3:+15893795 | Msa0443820:three_prime_UTR |
| TGGGAACAGGAACAGGACCC+TGG | 0.518247 | 3_3:+15893434 | Msa0443820:CDS |
| GAATGTCACTGCTATAACTC+TGG | 0.518341 | 3_3:-15892064 | None:intergenic |
| AAATGGTAATCCTTGAAGCT+TGG | 0.519230 | 3_3:-15889976 | None:intergenic |
| TCCCAAGTATCTCCTTAGCT+AGG | 0.521837 | 3_3:-15889498 | None:intergenic |
| AAACAGACAATTGATCCTAA+AGG | 0.524234 | 3_3:-15893551 | None:intergenic |
| AGGCATTACTTCATTCGACT+TGG | 0.524434 | 3_3:-15890101 | None:intergenic |
| TTCTTTCTCTACAAGAGTAA+GGG | 0.526412 | 3_3:+15892841 | Msa0443820:CDS |
| GGGAATCCATCTTGAATACA+AGG | 0.528068 | 3_3:-15889477 | None:intergenic |
| ACCTAACCTTGCTGCTAATG+AGG | 0.528818 | 3_3:-15892103 | None:intergenic |
| CTTCTCTCCTTGGCCATGCA+AGG | 0.533820 | 3_3:+15890814 | Msa0443820:CDS |
| CCCTAGCTAAGGAGATACTT+GGG | 0.534178 | 3_3:+15889497 | Msa0443820:CDS |
| ATGTAGCCTTGTATTCAAGA+TGG | 0.535860 | 3_3:+15889471 | Msa0443820:intron |
| AAAGATTCCTTGCATGGCCA+AGG | 0.537559 | 3_3:-15890821 | None:intergenic |
| CCTGCCGCCGCAAGTTCGAC+CGG | 0.538723 | 3_3:-15889932 | None:intergenic |
| CCCTCTAAAGATTCCTTGCA+TGG | 0.539576 | 3_3:-15890827 | None:intergenic |
| TCTTTGAAGAAAACTGATAG+AGG | 0.540796 | 3_3:-15888653 | None:intergenic |
| TTGCTTCAAGACATAGAAGC+AGG | 0.542101 | 3_3:+15890133 | Msa0443820:CDS |
| CCTAATCAGACTAGGCCTCC+CGG | 0.542740 | 3_3:+15892470 | Msa0443820:CDS |
| CTCTACTATAGTGATAGTCT+TGG | 0.544036 | 3_3:+15893594 | Msa0443820:three_prime_UTR |
| GGTGGATTATACTTTGGAGC+CGG | 0.547954 | 3_3:+15892417 | Msa0443820:CDS |
| CAAGATGGATTCCCTAGCTA+AGG | 0.548364 | 3_3:+15889486 | Msa0443820:CDS |
| GTGTCTATAAGAGAAGCAAT+TGG | 0.549405 | 3_3:-15889556 | None:intergenic |
| AAGTTGTAATACTGACCAAA+GGG | 0.556316 | 3_3:-15890000 | None:intergenic |
| GGTATCTTCTTCAGCTACAA+AGG | 0.559108 | 3_3:-15890023 | None:intergenic |
| CCCAAGTATCTCCTTAGCTA+GGG | 0.561981 | 3_3:-15889497 | None:intergenic |
| ACAGCATTCATAGGTCACTT+AGG | 0.563791 | 3_3:+15889577 | Msa0443820:CDS |
| TTTAGGGCCGGTCGAACTTG+CGG | 0.564182 | 3_3:+15889925 | Msa0443820:intron |
| CAAAACCTATTAGGAAGAAG+AGG | 0.568254 | 3_3:+15890501 | Msa0443820:CDS |
| CCATGCAAGGAATCTTTAGA+GGG | 0.568460 | 3_3:+15890827 | Msa0443820:CDS |
| GGAAGAGAGTGAAGAATGCA+AGG | 0.568506 | 3_3:-15884869 | None:intergenic |
| AAAATCTAAGAGTAGGGGAA+AGG | 0.568630 | 3_3:+15884836 | Msa0443820:five_prime_UTR |
| GAGATGAGGTCATCCAAACC+TGG | 0.571737 | 3_3:-15892158 | None:intergenic |
| ATCTTAAGTACTTAACAGCT+GGG | 0.572536 | 3_3:-15890765 | None:intergenic |
| ATAATGCAGTCAAGAACAAG+TGG | 0.577108 | 3_3:+15888624 | Msa0443820:CDS |
| GAAGTTGTAATACTGACCAA+AGG | 0.578499 | 3_3:-15890001 | None:intergenic |
| CACATTAATGATACATCAAG+AGG | 0.584041 | 3_3:-15893885 | None:intergenic |
| CAGCAACAGCAAGTGCAGAT+GGG | 0.589678 | 3_3:-15889528 | None:intergenic |
| ATAACAACTCAATCAAGAAG+AGG | 0.591987 | 3_3:-15888561 | None:intergenic |
| TTAACAGCTGGGACTAGCAT+AGG | 0.594938 | 3_3:-15890754 | None:intergenic |
| AATGAGACAAAAGTTGGAGA+TGG | 0.595696 | 3_3:+15890184 | Msa0443820:CDS |
| TCTTCAATTGTTACTAACAG+TGG | 0.596090 | 3_3:+15890464 | Msa0443820:CDS |
| AGCTTGGTTGAATACAGCAA+TGG | 0.599795 | 3_3:-15889960 | None:intergenic |
| ACAACTCCTTTATATGTCAT+CGG | 0.604310 | 3_3:+15890862 | Msa0443820:CDS |
| ATCAAACCTTAGGAGAACTC+AGG | 0.612204 | 3_3:+15884903 | Msa0443820:five_prime_UTR |
| TTGCAGCTTGAATAAGGCCA+AGG | 0.612326 | 3_3:-15890565 | None:intergenic |
| AGAGGCCACTCATTGTCTTG+AGG | 0.612667 | 3_3:+15893466 | Msa0443820:CDS |
| AAGGTTAGGTCCAATTCCAA+TGG | 0.613997 | 3_3:+15892116 | Msa0443820:CDS |
| TACTCAGTGTTGTCAAATAG+GGG | 0.614519 | 3_3:-15893837 | None:intergenic |
| AAGTGACTACTGCGGCAACA+AGG | 0.623453 | 3_3:+15892343 | Msa0443820:CDS |
| TGTATCCTCAAGACAATGAG+TGG | 0.628054 | 3_3:-15893471 | None:intergenic |
| TATCAGCCTCATTAGCAGCA+AGG | 0.628449 | 3_3:+15892097 | Msa0443820:CDS |
| AGGGCCGGTCGAACTTGCGG+CGG | 0.636828 | 3_3:+15889928 | Msa0443820:intron |
| ACCATCAGCGAGAAGAGATG+AGG | 0.646463 | 3_3:-15892172 | None:intergenic |
| GTTATTCACCTAATCAGACT+AGG | 0.646571 | 3_3:+15892462 | Msa0443820:CDS |
| GTTCACACCATCAAAGACAA+AGG | 0.648235 | 3_3:-15892645 | None:intergenic |
| GCATGTTTGCTGGTGTATGG+AGG | 0.655745 | 3_3:+15892908 | Msa0443820:CDS |
| GTTAGGTCCAATTCCAATGG+CGG | 0.671669 | 3_3:+15892119 | Msa0443820:CDS |
| GACTGTGCCGAAAAGTAATG+CGG | 0.674783 | 3_3:-15890543 | None:intergenic |
| ACATTAATGATACATCAAGA+GGG | 0.676174 | 3_3:-15893884 | None:intergenic |
| TGGCCTCTGAGAAAACGCCA+GGG | 0.690960 | 3_3:-15893451 | None:intergenic |
| TTGTACTAAATAGTGTATCG+CGG | 0.701950 | 3_3:+15893758 | Msa0443820:three_prime_UTR |
| ATGAGGTCATCCAAACCTGG+AGG | 0.722033 | 3_3:-15892155 | None:intergenic |
| CTATAATAAAGTGACTACTG+CGG | 0.736107 | 3_3:+15892335 | Msa0443820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAATAATAATAATA+AGG | + | chr3_3:15891348-15891367 | Msa0443820:intron | 0.0% |
| !! | TATTATTATTATTATTATTA+GGG | - | chr3_3:15891348-15891367 | None:intergenic | 0.0% |
| !! | TTATTATTATTATTATTATT+AGG | - | chr3_3:15891349-15891368 | None:intergenic | 0.0% |
| !!! | CATTTACTTTTTTTTTTTAA+GGG | + | chr3_3:15885374-15885393 | Msa0443820:intron | 10.0% |
| !!! | TTTTTTATAGATTTTCTTTT+TGG | - | chr3_3:15885839-15885858 | None:intergenic | 10.0% |
| !! | CCTTTAATTAATTAATTTAT+TGG | - | chr3_3:15887017-15887036 | None:intergenic | 10.0% |
| !! | CCAATAAATTAATTAATTAA+AGG | + | chr3_3:15887014-15887033 | Msa0443820:intron | 10.0% |
| !! | AAAAATATAGAGTTTATATT+AGG | + | chr3_3:15887834-15887853 | Msa0443820:intron | 10.0% |
| !!! | TATTTTGTTAAAAAATAGTT+AGG | + | chr3_3:15888159-15888178 | Msa0443820:intron | 10.0% |
| !!! | TTTTTTTTCTTATATAGAAA+TGG | + | chr3_3:15888402-15888421 | Msa0443820:intron | 10.0% |
| !!! | ACTATTTTTTATTTTTCATT+CGG | + | chr3_3:15889067-15889086 | Msa0443820:intron | 10.0% |
| !!! | ATAAAAAGTTTTCTATTTTA+GGG | + | chr3_3:15889331-15889350 | Msa0443820:intron | 10.0% |
| !!! | AAAATCAACAAATAATTTTT+AGG | + | chr3_3:15889357-15889376 | Msa0443820:intron | 10.0% |
| !!! | TATATTTTCAATTCATATTT+TGG | + | chr3_3:15891812-15891831 | Msa0443820:intron | 10.0% |
| !! | AGATAACAAAATATAAAAAT+CGG | - | chr3_3:15892746-15892765 | None:intergenic | 10.0% |
| !! | TGAAAAAATTCATATAGTAA+TGG | + | chr3_3:15885171-15885190 | Msa0443820:intron | 15.0% |
| !!! | GCATTTACTTTTTTTTTTTA+AGG | + | chr3_3:15885373-15885392 | Msa0443820:intron | 15.0% |
| !!! | GATTTGTTTTATACTTAAAT+TGG | + | chr3_3:15886616-15886635 | Msa0443820:intron | 15.0% |
| !!! | TTTTGTCTTATTTATTTTGA+TGG | + | chr3_3:15888460-15888479 | Msa0443820:intron | 15.0% |
| !!! | ACTAAAATGTTATTTAACTT+TGG | - | chr3_3:15888883-15888902 | None:intergenic | 15.0% |
| !! | CATAATATATGTGTATTATA+GGG | - | chr3_3:15888906-15888925 | None:intergenic | 15.0% |
| !! | AACATAAATCTAATATTACA+CGG | - | chr3_3:15889175-15889194 | None:intergenic | 15.0% |
| !!! | TAGAAAACTTTTTATGTTTT+TGG | - | chr3_3:15889326-15889345 | None:intergenic | 15.0% |
| !!! | CATAAAAAGTTTTCTATTTT+AGG | + | chr3_3:15889330-15889349 | Msa0443820:intron | 15.0% |
| !!! | TTTTACAAAATACTAATAGT+AGG | + | chr3_3:15889434-15889453 | Msa0443820:intron | 15.0% |
| !! | CAATATCATATTCTATTAAA+GGG | - | chr3_3:15889823-15889842 | None:intergenic | 15.0% |
| !! | ACAATATCATATTCTATTAA+AGG | - | chr3_3:15889824-15889843 | None:intergenic | 15.0% |
| !! | ACATATCTAATGAAATGAAT+TGG | - | chr3_3:15884933-15884952 | None:intergenic | 20.0% |
| !! | AAGATTATATAGATTTGATC+TGG | + | chr3_3:15884966-15884985 | Msa0443820:intron | 20.0% |
| !!! | AGAAATCTAAGTTGATTAAA+AGG | - | chr3_3:15885295-15885314 | None:intergenic | 20.0% |
| !! | AATAAATAATGTGATGAAGT+TGG | - | chr3_3:15885480-15885499 | None:intergenic | 20.0% |
| !!! | TTTATTTTTGGTAGATTTGT+GGG | - | chr3_3:15885514-15885533 | None:intergenic | 20.0% |
| !!! | TTTTATTTTTGGTAGATTTG+TGG | - | chr3_3:15885515-15885534 | None:intergenic | 20.0% |
| !! | ACTATTAATATCTGTCAAAA+TGG | + | chr3_3:15885604-15885623 | Msa0443820:intron | 20.0% |
| !! | ATTACATGCTTAGAATTAAA+TGG | + | chr3_3:15885791-15885810 | Msa0443820:intron | 20.0% |
| !!! | TTATAGATTTTCTTTTTGGT+GGG | - | chr3_3:15885835-15885854 | None:intergenic | 20.0% |
| !!! | TTTATAGATTTTCTTTTTGG+TGG | - | chr3_3:15885836-15885855 | None:intergenic | 20.0% |
| !! | ACTTTAATGAATAATAGTGT+AGG | + | chr3_3:15885902-15885921 | Msa0443820:intron | 20.0% |
| !!! | TCTGTTTTTCTAACTTATTA+CGG | + | chr3_3:15886648-15886667 | Msa0443820:intron | 20.0% |
| !!! | CAAGGTATTTATACTATATT+TGG | - | chr3_3:15887080-15887099 | None:intergenic | 20.0% |
| !! | CAAATATAGTATAAATACCT+TGG | + | chr3_3:15887078-15887097 | Msa0443820:intron | 20.0% |
| !! | TCACTTTATCATTAGTAAAA+AGG | + | chr3_3:15887241-15887260 | Msa0443820:intron | 20.0% |
| !!! | AAGATATTGACTATTGTTAA+AGG | - | chr3_3:15887331-15887350 | None:intergenic | 20.0% |
| !!! | GACATTTGGTTTTATTTTTT+TGG | - | chr3_3:15887598-15887617 | None:intergenic | 20.0% |
| !!! | AATGTTTTTGAAGGTTTTTA+TGG | + | chr3_3:15887925-15887944 | Msa0443820:intron | 20.0% |
| !!! | ATGTTTTTGAAGGTTTTTAT+GGG | + | chr3_3:15887926-15887945 | Msa0443820:intron | 20.0% |
| !! | TTCGGATTATATAATTCAAA+CGG | - | chr3_3:15887961-15887980 | None:intergenic | 20.0% |
| !! | TTTATATTATGTTACTGTCA+AGG | + | chr3_3:15888027-15888046 | Msa0443820:intron | 20.0% |
| !! | TTATATTATGTTACTGTCAA+GGG | + | chr3_3:15888028-15888047 | Msa0443820:intron | 20.0% |
| !!! | TTTATCATTTTCCATCTTAT+AGG | + | chr3_3:15888128-15888147 | Msa0443820:intron | 20.0% |
| !!! | TTATCATTTTCCATCTTATA+GGG | + | chr3_3:15888129-15888148 | Msa0443820:intron | 20.0% |
| !!! | TATTTTGATGGTACAAAATA+TGG | + | chr3_3:15888472-15888491 | Msa0443820:intron | 20.0% |
| !! | CCATAATATATGTGTATTAT+AGG | - | chr3_3:15888907-15888926 | None:intergenic | 20.0% |
| !! | CCTATAATACACATATATTA+TGG | + | chr3_3:15888904-15888923 | Msa0443820:intron | 20.0% |
| !!! | TTTAGTCCAATAGTATATTT+TGG | + | chr3_3:15889033-15889052 | Msa0443820:intron | 20.0% |
| !! | ATAGCATAAACCTAATATTA+CGG | + | chr3_3:15889277-15889296 | Msa0443820:intron | 20.0% |
| !!! | TTTGTTTTTTTCATGTGTTT+AGG | + | chr3_3:15889908-15889927 | Msa0443820:intron | 20.0% |
| !!! | TTGTTTTTTTCATGTGTTTA+GGG | + | chr3_3:15889909-15889928 | Msa0443820:intron | 20.0% |
| !! | TTGATACTAATGTTAGAAAA+TGG | + | chr3_3:15890268-15890287 | Msa0443820:intron | 20.0% |
| !!! | GAGATATTATCTTTTTTTGT+AGG | + | chr3_3:15890726-15890745 | Msa0443820:intron | 20.0% |
| !!! | CCATTTATAAGTATATTTTC+AGG | - | chr3_3:15891004-15891023 | None:intergenic | 20.0% |
| !! | CCTGAAAATATACTTATAAA+TGG | + | chr3_3:15891001-15891020 | Msa0443820:intron | 20.0% |
| !! | GAAAATATACTTATAAATGG+TGG | + | chr3_3:15891004-15891023 | Msa0443820:intron | 20.0% |
| !!! | CTCATATTTTACTTCAAATT+AGG | + | chr3_3:15891266-15891285 | Msa0443820:intron | 20.0% |
| !!! | GAATTTGTTTCAATTTCAAT+AGG | + | chr3_3:15892027-15892046 | Msa0443820:intron | 20.0% |
| !! | TTAATATATATCTTGCATCT+CGG | - | chr3_3:15892241-15892260 | None:intergenic | 20.0% |
| !! | TCAACATTTATTTAGTGATT+TGG | + | chr3_3:15892769-15892788 | Msa0443820:intron | 20.0% |
| !!! | TTCTTTGTTCAATTTTCATA+CGG | - | chr3_3:15893302-15893321 | None:intergenic | 20.0% |
| ! | TTTATTGTTATGTTAGTCGT+TGG | - | chr3_3:15885024-15885043 | None:intergenic | 25.0% |
| ! | AAAATACACATCTTTGTCTT+TGG | - | chr3_3:15885745-15885764 | None:intergenic | 25.0% |
| ! | TCTAAGCATGTAATTAATCA+TGG | - | chr3_3:15885785-15885804 | None:intergenic | 25.0% |
| ! | GTTACAAAATGACTCATTAT+GGG | - | chr3_3:15886069-15886088 | None:intergenic | 25.0% |
| ! | TGTTACAAAATGACTCATTA+TGG | - | chr3_3:15886070-15886089 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTCTATATGT+CGG | + | chr3_3:15886366-15886385 | Msa0443820:intron | 25.0% |
| !!! | TTTTCAATTTTTTCCCAGAA+AGG | + | chr3_3:15886672-15886691 | Msa0443820:intron | 25.0% |
| ! | GTAAAAGAAAAGAACTAAAG+TGG | - | chr3_3:15886710-15886729 | None:intergenic | 25.0% |
| !!! | GATTGTATTTTAAACCACTA+CGG | - | chr3_3:15886743-15886762 | None:intergenic | 25.0% |
| ! | AATGTATATGCATGTACTAT+TGG | + | chr3_3:15886822-15886841 | Msa0443820:intron | 25.0% |
| ! | ACTAGTTAAGGAAACAAAAA+AGG | - | chr3_3:15887162-15887181 | None:intergenic | 25.0% |
| ! | TACAAACTCTCTCAATATAT+AGG | - | chr3_3:15887408-15887427 | None:intergenic | 25.0% |
| !!! | TCCTAAAATTGTTATTTGAG+AGG | + | chr3_3:15887465-15887484 | Msa0443820:intron | 25.0% |
| !! | ACCTCTCAAATAACAATTTT+AGG | - | chr3_3:15887469-15887488 | None:intergenic | 25.0% |
| !!! | AAAATTGTTATTTGAGAGGT+AGG | + | chr3_3:15887469-15887488 | Msa0443820:intron | 25.0% |
| ! | TTCTTATATTGTGAGACATT+TGG | - | chr3_3:15887612-15887631 | None:intergenic | 25.0% |
| ! | ATGCATGTTAAAACTACAAA+TGG | + | chr3_3:15887717-15887736 | Msa0443820:intron | 25.0% |
| ! | TGCATGTTAAAACTACAAAT+GGG | + | chr3_3:15887718-15887737 | Msa0443820:intron | 25.0% |
| ! | TTAAGAAAAAGCCAAATGTT+CGG | - | chr3_3:15887777-15887796 | None:intergenic | 25.0% |
| ! | AGTTTAAATGAGTTGTAGTT+CGG | - | chr3_3:15887801-15887820 | None:intergenic | 25.0% |
| !!! | AGTGTTTCAAATGTTTTTGA+AGG | + | chr3_3:15887916-15887935 | Msa0443820:intron | 25.0% |
| ! | TTATATAATCCGAACTACAT+AGG | + | chr3_3:15887967-15887986 | Msa0443820:intron | 25.0% |
| ! | TATATTATGTTACTGTCAAG+GGG | + | chr3_3:15888029-15888048 | Msa0443820:intron | 25.0% |
| !! | TATCATTTTCCATCTTATAG+GGG | + | chr3_3:15888130-15888149 | Msa0443820:intron | 25.0% |
| ! | ATATGGAACTAACATATACT+TGG | + | chr3_3:15888489-15888508 | Msa0443820:intron | 25.0% |
| ! | GAGTTGTTATCAAAAGATTT+AGG | + | chr3_3:15888574-15888593 | Msa0443820:five_prime_UTR | 25.0% |
| !! | TCAAAAGATTTAGGATATCA+TGG | + | chr3_3:15888583-15888602 | Msa0443820:exon | 25.0% |
| !!! | TAAGTTGATTACACAAATTG+AGG | - | chr3_3:15888689-15888708 | None:intergenic | 25.0% |
| ! | AAACCAATAAAAGAACTCAT+AGG | - | chr3_3:15888937-15888956 | None:intergenic | 25.0% |
| ! | TACACTCCAAAATATACTAT+TGG | - | chr3_3:15889042-15889061 | None:intergenic | 25.0% |
| !! | AATATTACACGGACTATAAT+CGG | - | chr3_3:15889164-15889183 | None:intergenic | 25.0% |
| ! | AATATAGTTCAGATATTGCA+AGG | - | chr3_3:15889206-15889225 | None:intergenic | 25.0% |
| ! | TAGCATAAACCTAATATTAC+GGG | + | chr3_3:15889278-15889297 | Msa0443820:intron | 25.0% |
| ! | AAAAATCACTAATATCTTGC+AGG | + | chr3_3:15889389-15889408 | Msa0443820:intron | 25.0% |
| ! | AAAATCACTAATATCTTGCA+GGG | + | chr3_3:15889390-15889409 | Msa0443820:intron | 25.0% |
| !!! | ACTAGATTTTGATATTGTGA+AGG | + | chr3_3:15889622-15889641 | Msa0443820:intron | 25.0% |
| !!! | CTAGATTTTGATATTGTGAA+GGG | + | chr3_3:15889623-15889642 | Msa0443820:intron | 25.0% |
| ! | TCTTAATTGAAGTTGTAACA+AGG | + | chr3_3:15889849-15889868 | Msa0443820:intron | 25.0% |
| !!! | TTTGCTATTGATTCTATCAA+TGG | - | chr3_3:15890047-15890066 | None:intergenic | 25.0% |
| !!! | AACTTTTGTCTCATTTTTCA+AGG | - | chr3_3:15890179-15890198 | None:intergenic | 25.0% |
| ! | TTGAAAAATGAGACAAAAGT+TGG | + | chr3_3:15890178-15890197 | Msa0443820:CDS | 25.0% |
| ! | GTATAATTGAATGTATGAGT+CGG | + | chr3_3:15890290-15890309 | Msa0443820:intron | 25.0% |
| ! | ATTTGAATTTGCATCTGATA+AGG | - | chr3_3:15890435-15890454 | None:intergenic | 25.0% |
| ! | ACAAACGCATAAATTAGAAT+CGG | + | chr3_3:15890944-15890963 | Msa0443820:intron | 25.0% |
| ! | AAAGTTAATGAGAGAAGATT+TGG | + | chr3_3:15891144-15891163 | Msa0443820:intron | 25.0% |
| !!! | CTATGGTTTTATTTAGTTTC+CGG | + | chr3_3:15891212-15891231 | Msa0443820:intron | 25.0% |
| !!! | TATGGTTTTATTTAGTTTCC+GGG | + | chr3_3:15891213-15891232 | Msa0443820:intron | 25.0% |
| ! | TTGAAGTAAAATATGAGTAG+TGG | - | chr3_3:15891263-15891282 | None:intergenic | 25.0% |
| !!! | TACAAAATGATGATGCTTTT+AGG | + | chr3_3:15891670-15891689 | Msa0443820:intron | 25.0% |
| !! | ATTTTCCGGTTTCTTAAAAA+TGG | + | chr3_3:15891771-15891790 | Msa0443820:intron | 25.0% |
| !!! | ACATACCATTTTTAAGAAAC+CGG | - | chr3_3:15891779-15891798 | None:intergenic | 25.0% |
| ! | GTTTCTTAAAAATGGTATGT+TGG | + | chr3_3:15891779-15891798 | Msa0443820:intron | 25.0% |
| ! | TAAAAATGGTATGTTGGAAT+TGG | + | chr3_3:15891785-15891804 | Msa0443820:intron | 25.0% |
| ! | TTTGTTTCAATTTCAATAGG+TGG | + | chr3_3:15892030-15892049 | Msa0443820:intron | 25.0% |
| !!! | AACATTTTTGGAAAATACTC+CGG | - | chr3_3:15892439-15892458 | None:intergenic | 25.0% |
| !!! | ATTTGGTATTCTGTTTTTTC+AGG | + | chr3_3:15892786-15892805 | Msa0443820:intron | 25.0% |
| ! | ATACTATCATGGAAAGTTTA+GGG | - | chr3_3:15893044-15893063 | None:intergenic | 25.0% |
| ! | TATACTATCATGGAAAGTTT+AGG | - | chr3_3:15893045-15893064 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATATACTATCA+TGG | - | chr3_3:15893055-15893074 | None:intergenic | 25.0% |
| !!! | TCAAGTTTTTTAACCTAACA+TGG | + | chr3_3:15893137-15893156 | Msa0443820:intron | 25.0% |
| ! | TCTTGTATGATAGATTATCA+TGG | + | chr3_3:15893205-15893224 | Msa0443820:intron | 25.0% |
| ! | TGAAAAAGTGATGTAAAATG+TGG | - | chr3_3:15893530-15893549 | None:intergenic | 25.0% |
| ! | ACATTAATGATACATCAAGA+GGG | - | chr3_3:15893887-15893906 | None:intergenic | 25.0% |
| ! | TAGATTTTTCTCCCTCAAAA+AGG | - | chr3_3:15884824-15884843 | None:intergenic | 30.0% |
| ATCTGGTGTTTATTGTTACT+CGG | + | chr3_3:15884983-15885002 | Msa0443820:intron | 30.0% | |
| CTTTCTCAAATGAAAAATGC+AGG | - | chr3_3:15885345-15885364 | None:intergenic | 30.0% | |
| !! | TTTCATAGTGTGTTTTTGTC+AGG | - | chr3_3:15885579-15885598 | None:intergenic | 30.0% |
| GACAATGCATAAAATATGCA+AGG | + | chr3_3:15885694-15885713 | Msa0443820:intron | 30.0% | |
| GTAATTAATCATGGATGATG+AGG | - | chr3_3:15885776-15885795 | None:intergenic | 30.0% | |
| GACTCATTATGGGTATTAAA+TGG | - | chr3_3:15886059-15886078 | None:intergenic | 30.0% | |
| TTAACAAGAAGTAAAGTACG+TGG | - | chr3_3:15886211-15886230 | None:intergenic | 30.0% | |
| ! | ATTTAACTGTATCGACGTAT+CGG | - | chr3_3:15886327-15886346 | None:intergenic | 30.0% |
| ATTGTCGTATAATTGTTGAC+AGG | - | chr3_3:15886550-15886569 | None:intergenic | 30.0% | |
| ! | AACTAAAGTGGAACATGTTT+TGG | - | chr3_3:15886698-15886717 | None:intergenic | 30.0% |
| ! | TTTTGACAAAATTGCACACT+TGG | + | chr3_3:15886982-15887001 | Msa0443820:intron | 30.0% |
| ! | TACATCAAGAGAAGATTTTG+TGG | - | chr3_3:15887300-15887319 | None:intergenic | 30.0% |
| ! | CGAACTGATATTCTTTTTCT+GGG | - | chr3_3:15887443-15887462 | None:intergenic | 30.0% |
| ! | TCGAACTGATATTCTTTTTC+TGG | - | chr3_3:15887444-15887463 | None:intergenic | 30.0% |
| AACAATGCATACAATATGCA+AGG | + | chr3_3:15887529-15887548 | Msa0443820:intron | 30.0% | |
| AAAACTACAAATGGGATGTA+AGG | + | chr3_3:15887726-15887745 | Msa0443820:intron | 30.0% | |
| ATATTATGTTACTGTCAAGG+GGG | + | chr3_3:15888030-15888049 | Msa0443820:intron | 30.0% | |
| ATAAGAAAACCCCTATAAGA+TGG | - | chr3_3:15888142-15888161 | None:intergenic | 30.0% | |
| ! | CCTTCTTTTCATGTATTTGT+AGG | - | chr3_3:15888209-15888228 | None:intergenic | 30.0% |
| CCTACAAATACATGAAAAGA+AGG | + | chr3_3:15888206-15888225 | Msa0443820:intron | 30.0% | |
| ATAACAACTCAATCAAGAAG+AGG | - | chr3_3:15888564-15888583 | None:intergenic | 30.0% | |
| TAGGATATCATGGAAGATAA+TGG | + | chr3_3:15888593-15888612 | Msa0443820:exon | 30.0% | |
| ! | TCTTTGAAGAAAACTGATAG+AGG | - | chr3_3:15888656-15888675 | None:intergenic | 30.0% |
| !! | ATCAGATTCTCTAAAGCTTA+AGG | + | chr3_3:15888840-15888859 | Msa0443820:intron | 30.0% |
| !! | TCAGATTCTCTAAAGCTTAA+GGG | + | chr3_3:15888841-15888860 | Msa0443820:intron | 30.0% |
| ! | AGTCCTATGAGTTCTTTTAT+TGG | + | chr3_3:15888931-15888950 | Msa0443820:intron | 30.0% |
| !!! | TGTGTTCTTTTACTGGTTTT+AGG | - | chr3_3:15888965-15888984 | None:intergenic | 30.0% |
| ! | AGATGTTTGTGTTCTTTTAC+TGG | - | chr3_3:15888972-15888991 | None:intergenic | 30.0% |
| GGAAAAAGAAACTCTCAAAT+AGG | + | chr3_3:15889119-15889138 | Msa0443820:intron | 30.0% | |
| AGCATAAACCTAATATTACG+GGG | + | chr3_3:15889279-15889298 | Msa0443820:intron | 30.0% | |
| ATTGTTGTCATGTGACTAAA+AGG | + | chr3_3:15889668-15889687 | Msa0443820:intron | 30.0% | |
| AAGTTGTAATACTGACCAAA+GGG | - | chr3_3:15890003-15890022 | None:intergenic | 30.0% | |
| ATAGCTCATATCATCAAACA+TGG | - | chr3_3:15890230-15890249 | None:intergenic | 30.0% | |
| ATTAGTATCAATGTCTGTGT+CGG | - | chr3_3:15890259-15890278 | None:intergenic | 30.0% | |
| TCTTCAATTGTTACTAACAG+TGG | + | chr3_3:15890464-15890483 | Msa0443820:CDS | 30.0% | |
| AGGTTTAGCTGCAAATATAA+GGG | - | chr3_3:15890591-15890610 | None:intergenic | 30.0% | |
| ATCTTAAGTACTTAACAGCT+GGG | - | chr3_3:15890768-15890787 | None:intergenic | 30.0% | |
| AATCTTAAGTACTTAACAGC+TGG | - | chr3_3:15890769-15890788 | None:intergenic | 30.0% | |
| ACAACTCCTTTATATGTCAT+CGG | + | chr3_3:15890862-15890881 | Msa0443820:CDS | 30.0% | |
| CAAAAGAATGAACCAAGTTA+GGG | - | chr3_3:15891192-15891211 | None:intergenic | 30.0% | |
| ATTTCTTATCATATGCCCTT+GGG | - | chr3_3:15891394-15891413 | None:intergenic | 30.0% | |
| AATTTCTTATCATATGCCCT+TGG | - | chr3_3:15891395-15891414 | None:intergenic | 30.0% | |
| !! | TGATGCTTTTAGGTACATTA+TGG | + | chr3_3:15891680-15891699 | Msa0443820:intron | 30.0% |
| ATTAAGTTTGCCTTTATCAC+AGG | + | chr3_3:15892281-15892300 | Msa0443820:intron | 30.0% | |
| ATTATAGTCTTTCTCAGCAA+AGG | - | chr3_3:15892322-15892341 | None:intergenic | 30.0% | |
| CTATAATAAAGTGACTACTG+CGG | + | chr3_3:15892335-15892354 | Msa0443820:CDS | 30.0% | |
| !!! | CTGCAAATGAGTTTTGTTTT+AGG | + | chr3_3:15892369-15892388 | Msa0443820:CDS | 30.0% |
| !!! | ATGAGTTTTGTTTTAGGAGT+TGG | + | chr3_3:15892375-15892394 | Msa0443820:CDS | 30.0% |
| ! | GTGAATAACAGCAACATTTT+TGG | - | chr3_3:15892451-15892470 | None:intergenic | 30.0% |
| ACAAAGGCTAATGAATTGAT+TGG | - | chr3_3:15892632-15892651 | None:intergenic | 30.0% | |
| !!! | TATTCTGTTTTTTCAGGTCT+TGG | + | chr3_3:15892792-15892811 | Msa0443820:intron | 30.0% |
| ATTCTTTCTCTACAAGAGTA+AGG | + | chr3_3:15892840-15892859 | Msa0443820:CDS | 30.0% | |
| TTCTTTCTCTACAAGAGTAA+GGG | + | chr3_3:15892841-15892860 | Msa0443820:CDS | 30.0% | |
| !! | TACAAGAGTAAGGGTTTTAT+TGG | + | chr3_3:15892850-15892869 | Msa0443820:CDS | 30.0% |
| AGACTGCTTGAAAAAGTTTA+TGG | + | chr3_3:15892977-15892996 | Msa0443820:intron | 30.0% | |
| GATAGATTATCATGGATACA+TGG | + | chr3_3:15893213-15893232 | Msa0443820:intron | 30.0% | |
| CGATGTGATTAAGATATTCT+TGG | - | chr3_3:15893278-15893297 | None:intergenic | 30.0% | |
| !!! | ACATCACTTTTTCATCCTTT+AGG | + | chr3_3:15893536-15893555 | Msa0443820:three_prime_UTR | 30.0% |
| AAACAGACAATTGATCCTAA+AGG | - | chr3_3:15893554-15893573 | None:intergenic | 30.0% | |
| !!! | GGATCAATTGTCTGTTTTTT+AGG | + | chr3_3:15893557-15893576 | Msa0443820:three_prime_UTR | 30.0% |
| TTGTACTAAATAGTGTATCG+CGG | + | chr3_3:15893758-15893777 | Msa0443820:three_prime_UTR | 30.0% | |
| ATACTCAGTGTTGTCAAATA+GGG | - | chr3_3:15893841-15893860 | None:intergenic | 30.0% | |
| CACATTAATGATACATCAAG+AGG | - | chr3_3:15893888-15893907 | None:intergenic | 30.0% | |
| AAGATTATTCTTCAAGCTGT+CGG | + | chr3_3:15893924-15893943 | Msa0443820:three_prime_UTR | 30.0% | |
| AGGGAGAAAAATCTAAGAGT+AGG | + | chr3_3:15884829-15884848 | Msa0443820:five_prime_UTR | 35.0% | |
| GGGAGAAAAATCTAAGAGTA+GGG | + | chr3_3:15884830-15884849 | Msa0443820:five_prime_UTR | 35.0% | |
| GGAGAAAAATCTAAGAGTAG+GGG | + | chr3_3:15884831-15884850 | Msa0443820:five_prime_UTR | 35.0% | |
| AAAATCTAAGAGTAGGGGAA+AGG | + | chr3_3:15884836-15884855 | Msa0443820:five_prime_UTR | 35.0% | |
| !! | AAGGTTTGATCTTGACTTGT+AGG | - | chr3_3:15884893-15884912 | None:intergenic | 35.0% |
| ACAAGTCAAGATCAAACCTT+AGG | + | chr3_3:15884893-15884912 | Msa0443820:five_prime_UTR | 35.0% | |
| GTTTATTGTTACTCGGAAGT+CGG | + | chr3_3:15884990-15885009 | Msa0443820:intron | 35.0% | |
| TAGCATAAAGCAATGCCAAT+TGG | - | chr3_3:15885262-15885281 | None:intergenic | 35.0% | |
| !!! | TTGTCAGGCTTTTGGTTTAT+GGG | - | chr3_3:15885564-15885583 | None:intergenic | 35.0% |
| !!! | TTTGTCAGGCTTTTGGTTTA+TGG | - | chr3_3:15885565-15885584 | None:intergenic | 35.0% |
| ATATCTGTCAAAATGGTGAG+CGG | + | chr3_3:15885611-15885630 | Msa0443820:intron | 35.0% | |
| TGCATAAAATATGCAAGGTC+TGG | + | chr3_3:15885699-15885718 | Msa0443820:intron | 35.0% | |
| GCATAAAATATGCAAGGTCT+GGG | + | chr3_3:15885700-15885719 | Msa0443820:intron | 35.0% | |
| CATAAAATATGCAAGGTCTG+GGG | + | chr3_3:15885701-15885720 | Msa0443820:intron | 35.0% | |
| ATACACATCTTTGTCTTTGG+TGG | - | chr3_3:15885742-15885761 | None:intergenic | 35.0% | |
| TGCAGTAAGCATAAGAGATA+AGG | - | chr3_3:15886012-15886031 | None:intergenic | 35.0% | |
| CTTGTCACTAATAAAGTACG+TGG | - | chr3_3:15886155-15886174 | None:intergenic | 35.0% | |
| TACTTGTGTACTATGAAGCA+AGG | + | chr3_3:15886281-15886300 | Msa0443820:intron | 35.0% | |
| TGTACTATGAAGCAAGGATA+CGG | + | chr3_3:15886287-15886306 | Msa0443820:intron | 35.0% | |
| GTAATTCTATATGTCGGTGT+CGG | + | chr3_3:15886372-15886391 | Msa0443820:intron | 35.0% | |
| ! | TCATAGCTTCTGTAGGATTT+TGG | + | chr3_3:15886448-15886467 | Msa0443820:intron | 35.0% |
| TAATCCGTACAAGGTGAATA+TGG | - | chr3_3:15886517-15886536 | None:intergenic | 35.0% | |
| ! | TTTTAAACCACTACGGAATG+AGG | - | chr3_3:15886736-15886755 | None:intergenic | 35.0% |
| ATTTGAGAGGTAGGTCAAAA+AGG | + | chr3_3:15887478-15887497 | Msa0443820:intron | 35.0% | |
| !!! | TTTGGCCTACCTCTTTTTTT+TGG | - | chr3_3:15887580-15887599 | None:intergenic | 35.0% |
| ATGTTTGTAAGCCGAACATT+TGG | + | chr3_3:15887763-15887782 | Msa0443820:intron | 35.0% | |
| GGAACTAACATATACTTGGT+AGG | + | chr3_3:15888493-15888512 | Msa0443820:intron | 35.0% | |
| ATATACTTGGTAGGTTGTTC+AGG | + | chr3_3:15888502-15888521 | Msa0443820:intron | 35.0% | |
| ATAATGCAGTCAAGAACAAG+TGG | + | chr3_3:15888624-15888643 | Msa0443820:CDS | 35.0% | |
| ! | CAGTTTTCTTCAAAGATGCA+AGG | + | chr3_3:15888660-15888679 | Msa0443820:CDS | 35.0% |
| ACTTATTCACCCTTCTTTCT+TGG | + | chr3_3:15888704-15888723 | Msa0443820:intron | 35.0% | |
| TACTTTCGATATGACTCTGA+AGG | + | chr3_3:15889095-15889114 | Msa0443820:intron | 35.0% | |
| !! | GTTTTAGTCCCCGTAATATT+AGG | - | chr3_3:15889290-15889309 | None:intergenic | 35.0% |
| ATATCTTGCAGGGACTAAAA+AGG | + | chr3_3:15889400-15889419 | Msa0443820:intron | 35.0% | |
| GTGTCTATAAGAGAAGCAAT+TGG | - | chr3_3:15889559-15889578 | None:intergenic | 35.0% | |
| CTTATAGACACAGCATTCAT+AGG | + | chr3_3:15889568-15889587 | Msa0443820:CDS | 35.0% | |
| AGCCTCTTGTGTTAAAAACA+GGG | + | chr3_3:15889720-15889739 | Msa0443820:intron | 35.0% | |
| !!! | TACCCTGTTTTTAACACAAG+AGG | - | chr3_3:15889725-15889744 | None:intergenic | 35.0% |
| CTTGTGTTAAAAACAGGGTA+AGG | + | chr3_3:15889725-15889744 | Msa0443820:intron | 35.0% | |
| !!! | TTTTTTCATGTGTTTAGGGC+CGG | + | chr3_3:15889913-15889932 | Msa0443820:intron | 35.0% |
| AAATGGTAATCCTTGAAGCT+TGG | - | chr3_3:15889979-15889998 | None:intergenic | 35.0% | |
| ! | AAGGATTACCATTTTCCCTT+TGG | + | chr3_3:15889985-15890004 | Msa0443820:CDS | 35.0% |
| AATACTGACCAAAGGGAAAA+TGG | - | chr3_3:15889996-15890015 | None:intergenic | 35.0% | |
| GAAGTTGTAATACTGACCAA+AGG | - | chr3_3:15890004-15890023 | None:intergenic | 35.0% | |
| !! | GCAGTTCAATGAAAGCATTA+AGG | + | chr3_3:15890078-15890097 | Msa0443820:CDS | 35.0% |
| TCTTGAAGCAAATGATCATC+AGG | - | chr3_3:15890124-15890143 | None:intergenic | 35.0% | |
| ! | TTTCAAGGTACTATCCTGTT+TGG | - | chr3_3:15890164-15890183 | None:intergenic | 35.0% |
| AATGAGACAAAAGTTGGAGA+TGG | + | chr3_3:15890184-15890203 | Msa0443820:CDS | 35.0% | |
| TTCAGTTTCCAATACAGACA+TGG | - | chr3_3:15890318-15890337 | None:intergenic | 35.0% | |
| AGAGTGAGTCAAAACCTATT+AGG | + | chr3_3:15890492-15890511 | Msa0443820:CDS | 35.0% | |
| CAAAACCTATTAGGAAGAAG+AGG | + | chr3_3:15890501-15890520 | Msa0443820:CDS | 35.0% | |
| GAGGTTTAGCTGCAAATATA+AGG | - | chr3_3:15890592-15890611 | None:intergenic | 35.0% | |
| TTTGCAGCTAAACCTCTATT+AGG | + | chr3_3:15890596-15890615 | Msa0443820:CDS | 35.0% | |
| TAAACCTCTATTAGGTGCAA+TGG | + | chr3_3:15890604-15890623 | Msa0443820:CDS | 35.0% | |
| AAACCTCTATTAGGTGCAAT+GGG | + | chr3_3:15890605-15890624 | Msa0443820:CDS | 35.0% | |
| TACTTAAGATTGAGAGCCTT+AGG | + | chr3_3:15890778-15890797 | Msa0443820:CDS | 35.0% | |
| AACCTACCGATGACATATAA+AGG | - | chr3_3:15890871-15890890 | None:intergenic | 35.0% | |
| TGTTCTCAGAGTCTCTAATT+TGG | - | chr3_3:15890923-15890942 | None:intergenic | 35.0% | |
| CATTGTTAAGAATCACACCT+CGG | + | chr3_3:15890967-15890986 | Msa0443820:intron | 35.0% | |
| ! | TTCAGGTTATATCTTATCCG+AGG | - | chr3_3:15890987-15891006 | None:intergenic | 35.0% |
| GGATGGCTCAATAAATCTTT+AGG | - | chr3_3:15891040-15891059 | None:intergenic | 35.0% | |
| ATTTATTGAGCCATCCCTAA+GGG | + | chr3_3:15891044-15891063 | Msa0443820:intron | 35.0% | |
| ! | GAATTTTGCTTGATCCCTTA+GGG | - | chr3_3:15891061-15891080 | None:intergenic | 35.0% |
| ! | AGAATTTTGCTTGATCCCTT+AGG | - | chr3_3:15891062-15891081 | None:intergenic | 35.0% |
| GCAAAAGAATGAACCAAGTT+AGG | - | chr3_3:15891193-15891212 | None:intergenic | 35.0% | |
| ! | CTTGGTTCATTCTTTTGCTA+TGG | + | chr3_3:15891195-15891214 | Msa0443820:intron | 35.0% |
| TACTTCAAATTAGGCATCAG+AGG | + | chr3_3:15891275-15891294 | Msa0443820:intron | 35.0% | |
| TTTCTTATCATATGCCCTTG+GGG | - | chr3_3:15891393-15891412 | None:intergenic | 35.0% | |
| !! | ATTCTTTAACTTGTGCCCTA+AGG | + | chr3_3:15891514-15891533 | Msa0443820:intron | 35.0% |
| !! | TTCTTTAACTTGTGCCCTAA+GGG | + | chr3_3:15891515-15891534 | Msa0443820:intron | 35.0% |
| ! | TGAAGGATTTGCAGATTTTC+CGG | + | chr3_3:15891757-15891776 | Msa0443820:intron | 35.0% |
| CGAGAGATAAATGTTCGAAT+CGG | - | chr3_3:15891930-15891949 | None:intergenic | 35.0% | |
| TTCAATAGGTGGTCTATTGT+TGG | + | chr3_3:15892041-15892060 | Msa0443820:intron | 35.0% | |
| GTTATTCACCTAATCAGACT+AGG | + | chr3_3:15892462-15892481 | Msa0443820:CDS | 35.0% | |
| TTGTGCTAGGAAAATATACC+GGG | - | chr3_3:15892491-15892510 | None:intergenic | 35.0% | |
| GTTGTGCTAGGAAAATATAC+CGG | - | chr3_3:15892492-15892511 | None:intergenic | 35.0% | |
| !! | TCATTAGCCTTTGTCTTTGA+TGG | + | chr3_3:15892638-15892657 | Msa0443820:CDS | 35.0% |
| GAAAGAATGCAAACTTACCA+AGG | - | chr3_3:15892705-15892724 | None:intergenic | 35.0% | |
| !!! | GTAAGGGTTTTATTGGTATC+TGG | + | chr3_3:15892857-15892876 | Msa0443820:CDS | 35.0% |
| ! | AAAACTAGAGTCGTCGATTA+AGG | - | chr3_3:15893163-15893182 | None:intergenic | 35.0% |
| !!! | GACGACTCTAGTTTTTAACA+TGG | + | chr3_3:15893168-15893187 | Msa0443820:intron | 35.0% |
| AACATGTCAAATGCATATGC+AGG | + | chr3_3:15893410-15893429 | Msa0443820:intron | 35.0% | |
| CTCTACTATAGTGATAGTCT+TGG | + | chr3_3:15893594-15893613 | Msa0443820:three_prime_UTR | 35.0% | |
| TAGAAGAATCAGGTCTAATC+GGG | - | chr3_3:15893790-15893809 | None:intergenic | 35.0% | |
| GTAGAAGAATCAGGTCTAAT+CGG | - | chr3_3:15893791-15893810 | None:intergenic | 35.0% | |
| TACTCAGTGTTGTCAAATAG+GGG | - | chr3_3:15893840-15893859 | None:intergenic | 35.0% | |
| GATACTCAGTGTTGTCAAAT+AGG | - | chr3_3:15893842-15893861 | None:intergenic | 35.0% | |
| !! | AAGAGTGTGTAGCCTTTTTG+AGG | + | chr3_3:15884809-15884828 | Msa0443820:five_prime_UTR | 40.0% |
| ! | AGAGTGTGTAGCCTTTTTGA+GGG | + | chr3_3:15884810-15884829 | Msa0443820:five_prime_UTR | 40.0% |
| ATCAAACCTTAGGAGAACTC+AGG | + | chr3_3:15884903-15884922 | Msa0443820:five_prime_UTR | 40.0% | |
| TATGTTAGTCGTTGGTCCAA+CGG | - | chr3_3:15885016-15885035 | None:intergenic | 40.0% | |
| ATACATGTAAAGCTGCGTGT+TGG | - | chr3_3:15885215-15885234 | None:intergenic | 40.0% | |
| ! | GCATGACTTGCATTTCCAAT+TGG | + | chr3_3:15885244-15885263 | Msa0443820:intron | 40.0% |
| !! | GTGTGTTTTTGTCAGGCTTT+TGG | - | chr3_3:15885572-15885591 | None:intergenic | 40.0% |
| GGTATTAAATGGAAGCTGAG+TGG | - | chr3_3:15886048-15886067 | None:intergenic | 40.0% | |
| GTACAAGGTGAATATGGTCA+CGG | - | chr3_3:15886511-15886530 | None:intergenic | 40.0% | |
| GTGACCATATTCACCTTGTA+CGG | + | chr3_3:15886510-15886529 | Msa0443820:intron | 40.0% | |
| CTCTTAACGTAATCCGTACA+AGG | - | chr3_3:15886526-15886545 | None:intergenic | 40.0% | |
| ! | CTTGTACGGATTACGTTAAG+AGG | + | chr3_3:15886524-15886543 | Msa0443820:intron | 40.0% |
| !!! | GAACATGTTTTGGCCTTTCT+GGG | - | chr3_3:15886688-15886707 | None:intergenic | 40.0% |
| TTACTTTCCTCATTCCGTAG+TGG | + | chr3_3:15886726-15886745 | Msa0443820:intron | 40.0% | |
| AAAATGTTAACTAGTGCCCC+CGG | + | chr3_3:15887037-15887056 | Msa0443820:intron | 40.0% | |
| CTTTGACTACACAAGTTCCA+AGG | - | chr3_3:15887098-15887117 | None:intergenic | 40.0% | |
| TGCATACAATATGCAAGGTC+TGG | + | chr3_3:15887534-15887553 | Msa0443820:intron | 40.0% | |
| GCATACAATATGCAAGGTCT+GGG | + | chr3_3:15887535-15887554 | Msa0443820:intron | 40.0% | |
| CATACAATATGCAAGGTCTG+GGG | + | chr3_3:15887536-15887555 | Msa0443820:intron | 40.0% | |
| !!! | CTACCTCTTTTTTTTGGTGG+TGG | - | chr3_3:15887574-15887593 | None:intergenic | 40.0% |
| CACCACCAAAAAAAAGAGGT+AGG | + | chr3_3:15887572-15887591 | Msa0443820:intron | 40.0% | |
| AGTTTCTCGCACGTCATATT+CGG | + | chr3_3:15887879-15887898 | Msa0443820:intron | 40.0% | |
| TCAGGTTAGGCTCATTCTTA+AGG | + | chr3_3:15888520-15888539 | Msa0443820:five_prime_UTR | 40.0% | |
| CAGGTTAGGCTCATTCTTAA+GGG | + | chr3_3:15888521-15888540 | Msa0443820:five_prime_UTR | 40.0% | |
| TATTCACCCTTCTTTCTTGG+AGG | + | chr3_3:15888707-15888726 | Msa0443820:intron | 40.0% | |
| GTTAGACTGATTGCATGTCA+TGG | + | chr3_3:15888803-15888822 | Msa0443820:intron | 40.0% | |
| ! | TTTCGATATGACTCTGAAGG+TGG | + | chr3_3:15889098-15889117 | Msa0443820:intron | 40.0% |
| ! | ATTACACGGACTATAATCGG+AGG | - | chr3_3:15889161-15889180 | None:intergenic | 40.0% |
| GGGACTAAAACGAAAGAACA+AGG | + | chr3_3:15889299-15889318 | Msa0443820:intron | 40.0% | |
| ACAGCATTCATAGGTCACTT+AGG | + | chr3_3:15889577-15889596 | Msa0443820:CDS | 40.0% | |
| GATATTGTGAAGGGTAACCT+TGG | + | chr3_3:15889632-15889651 | Msa0443820:intron | 40.0% | |
| GTCATGTGACTAAAAGGTCA+CGG | + | chr3_3:15889674-15889693 | Msa0443820:intron | 40.0% | |
| TCATGTGACTAAAAGGTCAC+GGG | + | chr3_3:15889675-15889694 | Msa0443820:intron | 40.0% | |
| ! | GTTTTTAACACAAGAGGCTG+AGG | - | chr3_3:15889719-15889738 | None:intergenic | 40.0% |
| CAGCCTCTTGTGTTAAAAAC+AGG | + | chr3_3:15889719-15889738 | Msa0443820:intron | 40.0% | |
| TACGCTGGAACTTTATGTGT+AGG | + | chr3_3:15889793-15889812 | Msa0443820:intron | 40.0% | |
| ACGCTGGAACTTTATGTGTA+GGG | + | chr3_3:15889794-15889813 | Msa0443820:intron | 40.0% | |
| AGCTTGGTTGAATACAGCAA+TGG | - | chr3_3:15889963-15889982 | None:intergenic | 40.0% | |
| CTGTATTCAACCAAGCTTCA+AGG | + | chr3_3:15889966-15889985 | Msa0443820:CDS | 40.0% | |
| GGTATCTTCTTCAGCTACAA+AGG | - | chr3_3:15890026-15890045 | None:intergenic | 40.0% | |
| AGGCATTACTTCATTCGACT+TGG | - | chr3_3:15890104-15890123 | None:intergenic | 40.0% | |
| TTGCTTCAAGACATAGAAGC+AGG | + | chr3_3:15890133-15890152 | Msa0443820:CDS | 40.0% | |
| ATGTGCCTCTTCTTCCTAAT+AGG | - | chr3_3:15890509-15890528 | None:intergenic | 40.0% | |
| !! | GCATCTACCGCATTACTTTT+CGG | + | chr3_3:15890536-15890555 | Msa0443820:CDS | 40.0% |
| TAAGGGTTGCAGCTTGAATA+AGG | - | chr3_3:15890574-15890593 | None:intergenic | 40.0% | |
| AAACCCATTGCACCTAATAG+AGG | - | chr3_3:15890611-15890630 | None:intergenic | 40.0% | |
| CCATGCAAGGAATCTTTAGA+GGG | + | chr3_3:15890827-15890846 | Msa0443820:CDS | 40.0% | |
| CTCCTTTATATGTCATCGGT+AGG | + | chr3_3:15890866-15890885 | Msa0443820:intron | 40.0% | |
| GATTTATTGAGCCATCCCTA+AGG | + | chr3_3:15891043-15891062 | Msa0443820:intron | 40.0% | |
| GGATCAAGCAAAATTCTACG+AGG | + | chr3_3:15891065-15891084 | Msa0443820:intron | 40.0% | |
| ! | GTTAGTGCTTTTCCCTAACT+TGG | + | chr3_3:15891177-15891196 | Msa0443820:intron | 40.0% |
| AAATGATAACATGTGCCCCA+AGG | + | chr3_3:15891375-15891394 | Msa0443820:intron | 40.0% | |
| AATGATAACATGTGCCCCAA+GGG | + | chr3_3:15891376-15891395 | Msa0443820:intron | 40.0% | |
| ! | CTTGTTATCTTGTGCCCTTA+GGG | - | chr3_3:15891532-15891551 | None:intergenic | 40.0% |
| ! | TCTTGTTATCTTGTGCCCTT+AGG | - | chr3_3:15891533-15891552 | None:intergenic | 40.0% |
| ATCTGCAAATCCTTCATGCT+TGG | - | chr3_3:15891753-15891772 | None:intergenic | 40.0% | |
| ! | GACAGTTCAAGTTTCATGCT+CGG | - | chr3_3:15891860-15891879 | None:intergenic | 40.0% |
| ACTGTCCGAGTTTAATCAGA+CGG | + | chr3_3:15891874-15891893 | Msa0443820:intron | 40.0% | |
| CTAGACCGTCTGATTAAACT+CGG | - | chr3_3:15891882-15891901 | None:intergenic | 40.0% | |
| TTAATCAGACGGTCTAGATG+TGG | + | chr3_3:15891885-15891904 | Msa0443820:intron | 40.0% | |
| GAATGTCACTGCTATAACTC+TGG | - | chr3_3:15892067-15892086 | None:intergenic | 40.0% | |
| AAGGTTAGGTCCAATTCCAA+TGG | + | chr3_3:15892116-15892135 | Msa0443820:CDS | 40.0% | |
| TGGTTTAGCTGTTGCAATAC+AGG | + | chr3_3:15892191-15892210 | Msa0443820:CDS | 40.0% | |
| GCTAGAATTGCCTGTGATAA+AGG | - | chr3_3:15892294-15892313 | None:intergenic | 40.0% | |
| !! | GTTGGAGGTGGATTATACTT+TGG | + | chr3_3:15892411-15892430 | Msa0443820:CDS | 40.0% |
| CTAATCTATTGCGTTGTGCT+AGG | - | chr3_3:15892504-15892523 | None:intergenic | 40.0% | |
| GTTCACACCATCAAAGACAA+AGG | - | chr3_3:15892648-15892667 | None:intergenic | 40.0% | |
| !! | GTCTTTGATGGTGTGAACTA+TGG | + | chr3_3:15892650-15892669 | Msa0443820:CDS | 40.0% |
| CATGCGAAGACTCATATAGA+TGG | - | chr3_3:15892893-15892912 | None:intergenic | 40.0% | |
| ATAAGCGCTCATCATATACG+TGG | - | chr3_3:15893102-15893121 | None:intergenic | 40.0% | |
| TGTCAAATGCATATGCAGGA+TGG | + | chr3_3:15893414-15893433 | Msa0443820:intron | 40.0% | |
| GTCAAATGCATATGCAGGAT+GGG | + | chr3_3:15893415-15893434 | Msa0443820:intron | 40.0% | |
| TGTATCCTCAAGACAATGAG+TGG | - | chr3_3:15893474-15893493 | None:intergenic | 40.0% | |
| ACGACACTAGCACGTATAAA+TGG | - | chr3_3:15893626-15893645 | None:intergenic | 40.0% | |
| CTTGACAACATTGACGATAC+TGG | - | chr3_3:15893651-15893670 | None:intergenic | 40.0% | |
| TCTAAGAGTAGGGGAAAGGT+TGG | + | chr3_3:15884840-15884859 | Msa0443820:five_prime_UTR | 45.0% | |
| GGAAGAGAGTGAAGAATGCA+AGG | - | chr3_3:15884872-15884891 | None:intergenic | 45.0% | |
| TGAGCTTAGCTCAGTTGGAA+TGG | + | chr3_3:15885672-15885691 | Msa0443820:intron | 45.0% | |
| CACATCTTTGTCTTTGGTGG+TGG | - | chr3_3:15885739-15885758 | None:intergenic | 45.0% | |
| CAAGAAGTAAAGTACGTGGC+AGG | - | chr3_3:15886207-15886226 | None:intergenic | 45.0% | |
| CCTACAGAAGCTATGAAGCA+CGG | - | chr3_3:15886444-15886463 | None:intergenic | 45.0% | |
| !!! | GGAACATGTTTTGGCCTTTC+TGG | - | chr3_3:15886689-15886708 | None:intergenic | 45.0% |
| AAATGTTAACTAGTGCCCCC+GGG | + | chr3_3:15887038-15887057 | Msa0443820:intron | 45.0% | |
| TGTTTCCTTAACTAGTGCCC+CGG | + | chr3_3:15887166-15887185 | Msa0443820:intron | 45.0% | |
| TCTTGTTAACTAGTGCCTCC+GGG | - | chr3_3:15887187-15887206 | None:intergenic | 45.0% | |
| ! | GTCTTGTTAACTAGTGCCTC+CGG | - | chr3_3:15887188-15887207 | None:intergenic | 45.0% |
| CATCGTGAGCTTAGCTCAAT+TGG | + | chr3_3:15887502-15887521 | Msa0443820:intron | 45.0% | |
| !!! | CTTTTTTTTGGTGGTGGTCG+AGG | - | chr3_3:15887568-15887587 | None:intergenic | 45.0% |
| CGACCACCACCAAAAAAAAG+AGG | + | chr3_3:15887568-15887587 | Msa0443820:intron | 45.0% | |
| !!! | GGCCTACCTCTTTTTTTTGG+TGG | - | chr3_3:15887577-15887596 | None:intergenic | 45.0% |
| TGACGTGCGAGAAACTCATA+GGG | - | chr3_3:15887875-15887894 | None:intergenic | 45.0% | |
| ATGACGTGCGAGAAACTCAT+AGG | - | chr3_3:15887876-15887895 | None:intergenic | 45.0% | |
| ! | CTTGGTAGGTTGTTCAGGTT+AGG | + | chr3_3:15888507-15888526 | Msa0443820:intron | 45.0% |
| ! | CAAGATGGATTCCCTAGCTA+AGG | + | chr3_3:15889486-15889505 | Msa0443820:CDS | 45.0% |
| TCCCTAGCTAAGGAGATACT+TGG | + | chr3_3:15889496-15889515 | Msa0443820:CDS | 45.0% | |
| CCCAAGTATCTCCTTAGCTA+GGG | - | chr3_3:15889500-15889519 | None:intergenic | 45.0% | |
| CCCTAGCTAAGGAGATACTT+GGG | + | chr3_3:15889497-15889516 | Msa0443820:CDS | 45.0% | |
| TCCCAAGTATCTCCTTAGCT+AGG | - | chr3_3:15889501-15889520 | None:intergenic | 45.0% | |
| CAATCTTACCAGTTGTGCCA+AGG | - | chr3_3:15889652-15889671 | None:intergenic | 45.0% | |
| AAGGTCACGGGTTCAAATCT+TGG | + | chr3_3:15889687-15889706 | Msa0443820:intron | 45.0% | |
| TGCGACAATACACCAAATGG+TGG | + | chr3_3:15889749-15889768 | Msa0443820:intron | 45.0% | |
| GCGACAATACACCAAATGGT+GGG | + | chr3_3:15889750-15889769 | Msa0443820:intron | 45.0% | |
| ATAAAGTTCCAGCGTACGCA+GGG | - | chr3_3:15889789-15889808 | None:intergenic | 45.0% | |
| ! | ACGCCTTCAATCTGAAGTGT+CGG | + | chr3_3:15890339-15890358 | Msa0443820:intron | 45.0% |
| GTGCTTCGTAGGATATGAGA+GGG | + | chr3_3:15890361-15890380 | Msa0443820:intron | 45.0% | |
| GACTGTGCCGAAAAGTAATG+CGG | - | chr3_3:15890546-15890565 | None:intergenic | 45.0% | |
| !! | TTACTTTTCGGCACAGTCCT+TGG | + | chr3_3:15890548-15890567 | Msa0443820:CDS | 45.0% |
| TTGCAGCTTGAATAAGGCCA+AGG | - | chr3_3:15890568-15890587 | None:intergenic | 45.0% | |
| ! | TTAACAGCTGGGACTAGCAT+AGG | - | chr3_3:15890757-15890776 | None:intergenic | 45.0% |
| AAAGATTCCTTGCATGGCCA+AGG | - | chr3_3:15890824-15890843 | None:intergenic | 45.0% | |
| GCCATGCAAGGAATCTTTAG+AGG | + | chr3_3:15890826-15890845 | Msa0443820:CDS | 45.0% | |
| ! | CCCTCTAAAGATTCCTTGCA+TGG | - | chr3_3:15890830-15890849 | None:intergenic | 45.0% |
| TTTGCTTGATCCCTTAGGGA+TGG | - | chr3_3:15891057-15891076 | None:intergenic | 45.0% | |
| GTATGCATTGAACGTCGCTA+TGG | + | chr3_3:15891235-15891254 | Msa0443820:intron | 45.0% | |
| ! | CTGAGAGAGCACATGTGAAA+TGG | - | chr3_3:15891306-15891325 | None:intergenic | 45.0% |
| AATCCTTCATGCTTGGAGGT+AGG | - | chr3_3:15891746-15891765 | None:intergenic | 45.0% | |
| TGCAAATCCTTCATGCTTGG+AGG | - | chr3_3:15891750-15891769 | None:intergenic | 45.0% | |
| TGCTGCTAATGAGGCTGATA+AGG | - | chr3_3:15892097-15892116 | None:intergenic | 45.0% | |
| TATCAGCCTCATTAGCAGCA+AGG | + | chr3_3:15892097-15892116 | Msa0443820:CDS | 45.0% | |
| ACCTAACCTTGCTGCTAATG+AGG | - | chr3_3:15892106-15892125 | None:intergenic | 45.0% | |
| GTTAGGTCCAATTCCAATGG+CGG | + | chr3_3:15892119-15892138 | Msa0443820:CDS | 45.0% | |
| GTTGGACTCTCTCTAGTAGT+TGG | + | chr3_3:15892393-15892412 | Msa0443820:CDS | 45.0% | |
| !! | GGTGGATTATACTTTGGAGC+CGG | + | chr3_3:15892417-15892436 | Msa0443820:CDS | 45.0% |
| TGCTAGGAAAATATACCGGG+AGG | - | chr3_3:15892488-15892507 | None:intergenic | 45.0% | |
| GTTGTGTTGCAGCAACAAAC+TGG | - | chr3_3:15892610-15892629 | None:intergenic | 45.0% | |
| CGCTTATTCTGCATACTCCT+TGG | + | chr3_3:15892685-15892704 | Msa0443820:CDS | 45.0% | |
| ATGAGTCTTCGCATGTTTGC+TGG | + | chr3_3:15892898-15892917 | Msa0443820:CDS | 45.0% | |
| ! | TTCGCATGTTTGCTGGTGTA+TGG | + | chr3_3:15892905-15892924 | Msa0443820:CDS | 45.0% |
| ! | TCGTCGATTAAGGCCATGTT+AGG | - | chr3_3:15893153-15893172 | None:intergenic | 45.0% |
| TCCGCAATGCTACAGTGTTA+TGG | + | chr3_3:15893706-15893725 | Msa0443820:intron | 45.0% | |
| GCCATAACACTGTAGCATTG+CGG | - | chr3_3:15893710-15893729 | None:intergenic | 45.0% | |
| GACCTGATTCTTCTACGCTA+TGG | + | chr3_3:15893795-15893814 | Msa0443820:three_prime_UTR | 45.0% | |
| TGCCATAGCGTAGAAGAATC+AGG | - | chr3_3:15893800-15893819 | None:intergenic | 45.0% | |
| !!! | TTATTTTTAAATATATTAGA+TGG | + | chr3_3:15885448-15885467 | Msa0443820:intron | 5.0% |
| !!! | TTTAGTTTTATTTTTATTTT+TGG | - | chr3_3:15885526-15885545 | None:intergenic | 5.0% |
| !!! | ATATTTAAAACAAATTTATA+TGG | - | chr3_3:15886885-15886904 | None:intergenic | 5.0% |
| !! | ATACTTTATAATTTAATTAA+GGG | - | chr3_3:15887210-15887229 | None:intergenic | 5.0% |
| !! | TATACTTTATAATTTAATTA+AGG | - | chr3_3:15887211-15887230 | None:intergenic | 5.0% |
| !! | AATGAAAAAAATAATAAAAA+AGG | + | chr3_3:15889007-15889026 | Msa0443820:intron | 5.0% |
| GGCATACCTGAGTTCTCCTA+AGG | - | chr3_3:15884912-15884931 | None:intergenic | 50.0% | |
| !! | TTTGTCTTTGGTGGTGGCCA+GGG | - | chr3_3:15885733-15885752 | None:intergenic | 50.0% |
| CCGTGCTTCATAGCTTCTGT+AGG | + | chr3_3:15886441-15886460 | Msa0443820:intron | 50.0% | |
| CAAGGTGAATATGGTCACGG+TGG | - | chr3_3:15886508-15886527 | None:intergenic | 50.0% | |
| AATGTTAACTAGTGCCCCCG+GGG | + | chr3_3:15887039-15887058 | Msa0443820:intron | 50.0% | |
| CTTGTTAACTAGTGCCTCCG+GGG | - | chr3_3:15887186-15887205 | None:intergenic | 50.0% | |
| CTCGTGCGTCCTATGTAGTT+CGG | - | chr3_3:15887979-15887998 | None:intergenic | 50.0% | |
| ! | GTTACTGTCAAGGGGGTGTA+TGG | + | chr3_3:15888037-15888056 | Msa0443820:intron | 50.0% |
| ! | TCAAGGGGGTGTATGGAACT+GGG | + | chr3_3:15888044-15888063 | Msa0443820:intron | 50.0% |
| CTGGGGAAGGCTCTTGAATT+AGG | + | chr3_3:15888062-15888081 | Msa0443820:intron | 50.0% | |
| CCTGCTCCTCCAAGAAAGAA+GGG | - | chr3_3:15888716-15888735 | None:intergenic | 50.0% | |
| CCTTCTTTCTTGGAGGAGCA+GGG | + | chr3_3:15888714-15888733 | Msa0443820:intron | 50.0% | |
| CAGCAACAGCAAGTGCAGAT+GGG | - | chr3_3:15889531-15889550 | None:intergenic | 50.0% | |
| AAGGGTAACCTTGGCACAAC+TGG | + | chr3_3:15889641-15889660 | Msa0443820:intron | 50.0% | |
| GGCTGCGACAATACACCAAA+TGG | + | chr3_3:15889746-15889765 | Msa0443820:intron | 50.0% | |
| CATAAAGTTCCAGCGTACGC+AGG | - | chr3_3:15889790-15889809 | None:intergenic | 50.0% | |
| AGAAGCAGGTGCAACCAAAC+AGG | + | chr3_3:15890147-15890166 | Msa0443820:CDS | 50.0% | |
| !! | AGTCGGTGCCATGTCTGTAT+TGG | + | chr3_3:15890307-15890326 | Msa0443820:intron | 50.0% |
| ! | GCACCGACACTTCAGATTGA+AGG | - | chr3_3:15890345-15890364 | None:intergenic | 50.0% |
| GGTGCTTCGTAGGATATGAG+AGG | + | chr3_3:15890360-15890379 | Msa0443820:intron | 50.0% | |
| AGCGACGTTCAATGCATACC+CGG | - | chr3_3:15891234-15891253 | None:intergenic | 50.0% | |
| TCTCCTACCTCCAAGCATGA+AGG | + | chr3_3:15891740-15891759 | Msa0443820:intron | 50.0% | |
| GCCTCATTAGCAGCAAGGTT+AGG | + | chr3_3:15892102-15892121 | Msa0443820:CDS | 50.0% | |
| TGGAATGCCGCCATTGGAAT+TGG | - | chr3_3:15892129-15892148 | None:intergenic | 50.0% | |
| ! | CATGTTTGGAATGCCGCCAT+TGG | - | chr3_3:15892135-15892154 | None:intergenic | 50.0% |
| TCCAAACATGCCTCCAGGTT+TGG | + | chr3_3:15892145-15892164 | Msa0443820:CDS | 50.0% | |
| ! | TCCAAACCTGGAGGCATGTT+TGG | - | chr3_3:15892149-15892168 | None:intergenic | 50.0% |
| ATGAGGTCATCCAAACCTGG+AGG | - | chr3_3:15892158-15892177 | None:intergenic | 50.0% | |
| GAGATGAGGTCATCCAAACC+TGG | - | chr3_3:15892161-15892180 | None:intergenic | 50.0% | |
| ACCTCATCTCTTCTCGCTGA+TGG | + | chr3_3:15892171-15892190 | Msa0443820:CDS | 50.0% | |
| ACCATCAGCGAGAAGAGATG+AGG | - | chr3_3:15892175-15892194 | None:intergenic | 50.0% | |
| AAGTGACTACTGCGGCAACA+AGG | + | chr3_3:15892343-15892362 | Msa0443820:CDS | 50.0% | |
| GGACTCTCTCTAGTAGTTGG+AGG | + | chr3_3:15892396-15892415 | Msa0443820:CDS | 50.0% | |
| CTCTCTCTAGTAGTTGGAGG+TGG | + | chr3_3:15892399-15892418 | Msa0443820:CDS | 50.0% | |
| ! | GCATGTTTGCTGGTGTATGG+AGG | + | chr3_3:15892908-15892927 | Msa0443820:CDS | 50.0% |
| TGCATATGCAGGATGGGAAC+AGG | + | chr3_3:15893421-15893440 | Msa0443820:intron | 50.0% | |
| AGAGGCCACTCATTGTCTTG+AGG | + | chr3_3:15893466-15893485 | Msa0443820:CDS | 50.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr3_3:15885670-15885689 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr3_3:15885667-15885686 | Msa0443820:intron | 55.0% | |
| ! | AAGGTCTGGGGTTCAAACCC+TGG | + | chr3_3:15885713-15885732 | Msa0443820:intron | 55.0% |
| !! | CTTTGTCTTTGGTGGTGGCC+AGG | - | chr3_3:15885734-15885753 | None:intergenic | 55.0% |
| GCAAGGATACGGACACGACA+TGG | + | chr3_3:15886298-15886317 | Msa0443820:intron | 55.0% | |
| GACACGACACGTGTCTGACA+CGG | + | chr3_3:15886394-15886413 | Msa0443820:intron | 55.0% | |
| ACACGACACGTGTCTGACAC+GGG | + | chr3_3:15886395-15886414 | Msa0443820:intron | 55.0% | |
| GCACGGACACTCCTCGAATA+AGG | - | chr3_3:15886427-15886446 | None:intergenic | 55.0% | |
| TTTCCTTAACCAGTGCCCCG+GGG | - | chr3_3:15887057-15887076 | None:intergenic | 55.0% | |
| GTTTCCTTAACCAGTGCCCC+GGG | - | chr3_3:15887058-15887077 | None:intergenic | 55.0% | |
| GGTTTCCTTAACCAGTGCCC+CGG | - | chr3_3:15887059-15887078 | None:intergenic | 55.0% | |
| TTCCTTAACTAGTGCCCCGG+AGG | + | chr3_3:15887169-15887188 | Msa0443820:intron | 55.0% | |
| ! | GTCAAGGGGGTGTATGGAAC+TGG | + | chr3_3:15888043-15888062 | Msa0443820:intron | 55.0% |
| ! | CAAGGGGGTGTATGGAACTG+GGG | + | chr3_3:15888045-15888064 | Msa0443820:intron | 55.0% |
| CCCTTCTTTCTTGGAGGAGC+AGG | + | chr3_3:15888713-15888732 | Msa0443820:intron | 55.0% | |
| CCCTGCTCCTCCAAGAAAGA+AGG | - | chr3_3:15888717-15888736 | None:intergenic | 55.0% | |
| GCAGCAACAGCAAGTGCAGA+TGG | - | chr3_3:15889532-15889551 | None:intergenic | 55.0% | |
| ! | CAAATGGTGGGACCTCTTCC+CGG | + | chr3_3:15889762-15889781 | Msa0443820:intron | 55.0% |
| ! | TTTAGGGCCGGTCGAACTTG+CGG | + | chr3_3:15889925-15889944 | Msa0443820:intron | 55.0% |
| !! | CTGAAGTGTCGGTGCTTCGT+AGG | + | chr3_3:15890350-15890369 | Msa0443820:intron | 55.0% |
| !! | AAGCACTGCAGGAGCACCTA+AGG | - | chr3_3:15890797-15890816 | None:intergenic | 55.0% |
| TCCTGCAGTGCTTCTCTCCT+TGG | + | chr3_3:15890804-15890823 | Msa0443820:CDS | 55.0% | |
| CTTCTCTCCTTGGCCATGCA+AGG | + | chr3_3:15890814-15890833 | Msa0443820:CDS | 55.0% | |
| GGCATTCCAAACATGCCTCC+AGG | + | chr3_3:15892140-15892159 | Msa0443820:CDS | 55.0% | |
| CCTAATCAGACTAGGCCTCC+CGG | + | chr3_3:15892470-15892489 | Msa0443820:CDS | 55.0% | |
| TGCAGGATGGGAACAGGAAC+AGG | + | chr3_3:15893427-15893446 | Msa0443820:intron | 55.0% | |
| ! | TGGCCTCTGAGAAAACGCCA+GGG | - | chr3_3:15893454-15893473 | None:intergenic | 55.0% |
| GTTACTCGGAAGTCGGCCGT+TGG | + | chr3_3:15884997-15885016 | Msa0443820:intron | 60.0% | |
| CACGACACGTGTCTGACACG+GGG | + | chr3_3:15886396-15886415 | Msa0443820:intron | 60.0% | |
| ! | ACGGGGACACGCCTTATTCG+AGG | + | chr3_3:15886413-15886432 | Msa0443820:intron | 60.0% |
| TTCCTTAACCAGTGCCCCGG+GGG | - | chr3_3:15887056-15887075 | None:intergenic | 60.0% | |
| ! | TGCCTCCGGGGCACTAGTTA+AGG | - | chr3_3:15887174-15887193 | None:intergenic | 60.0% |
| GGGGTGTATGGAACTGGGGA+AGG | + | chr3_3:15888049-15888068 | Msa0443820:intron | 60.0% | |
| CGGGAAGAGGTCCCACCATT+TGG | - | chr3_3:15889764-15889783 | None:intergenic | 60.0% | |
| !! | GCCAAGGAGAGAAGCACTGC+AGG | - | chr3_3:15890808-15890827 | None:intergenic | 60.0% |
| CCGGGAGGCCTAGTCTGATT+AGG | - | chr3_3:15892473-15892492 | None:intergenic | 60.0% | |
| TGGGAACAGGAACAGGACCC+TGG | + | chr3_3:15893434-15893453 | Msa0443820:CDS | 60.0% | |
| ! | GGACCCTGGCGTTTTCTCAG+AGG | + | chr3_3:15893448-15893467 | Msa0443820:CDS | 60.0% |
| ! | GTGGCCTCTGAGAAAACGCC+AGG | - | chr3_3:15893455-15893474 | None:intergenic | 60.0% |
| TTCCAGCGTACGCAGGGTCC+GGG | - | chr3_3:15889783-15889802 | None:intergenic | 65.0% | |
| GTTCCAGCGTACGCAGGGTC+CGG | - | chr3_3:15889784-15889803 | None:intergenic | 65.0% | |
| AACTAGTGCCCCCGGGGCAC+TGG | + | chr3_3:15887045-15887064 | Msa0443820:intron | 70.0% | |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr3_3:15887051-15887070 | Msa0443820:intron | 70.0% |
| CGTACGCAGGGTCCGGGAAG+AGG | - | chr3_3:15889777-15889796 | None:intergenic | 70.0% | |
| TTCCCGGACCCTGCGTACGC+TGG | + | chr3_3:15889778-15889797 | Msa0443820:intron | 70.0% | |
| AGGGCCGGTCGAACTTGCGG+CGG | + | chr3_3:15889928-15889947 | Msa0443820:intron | 70.0% | |
| CCTGCCGCCGCAAGTTCGAC+CGG | - | chr3_3:15889935-15889954 | None:intergenic | 70.0% | |
| CCGGTCGAACTTGCGGCGGC+AGG | + | chr3_3:15889932-15889951 | Msa0443820:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 15884785 | 15893959 | 15884785 | ID=Msa0443820;Name=Msa0443820 |
| chr3_3 | mRNA | 15884785 | 15893959 | 15884785 | ID=Msa0443820-mRNA-1;Parent=Msa0443820;Name=Msa0443820-mRNA-1;_AED=0.13;_eAED=0.13;_QI=227|0.90|1|1|0.81|0.66|12|434|478 |
| chr3_3 | exon | 15884785 | 15884924 | 15884785 | ID=Msa0443820-mRNA-1:exon:3325;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15888515 | 15888681 | 15888515 | ID=Msa0443820-mRNA-1:exon:3326;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15889477 | 15889598 | 15889477 | ID=Msa0443820-mRNA-1:exon:3327;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15889930 | 15890205 | 15889930 | ID=Msa0443820-mRNA-1:exon:3328;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15890441 | 15890637 | 15890441 | ID=Msa0443820-mRNA-1:exon:3329;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15890748 | 15890883 | 15890748 | ID=Msa0443820-mRNA-1:exon:3330;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15892049 | 15892212 | 15892049 | ID=Msa0443820-mRNA-1:exon:3331;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15892303 | 15892491 | 15892303 | ID=Msa0443820-mRNA-1:exon:3332;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15892611 | 15892706 | 15892611 | ID=Msa0443820-mRNA-1:exon:3333;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15892808 | 15892929 | 15892808 | ID=Msa0443820-mRNA-1:exon:3334;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15893432 | 15893688 | 15893432 | ID=Msa0443820-mRNA-1:exon:3335;Parent=Msa0443820-mRNA-1 |
| chr3_3 | exon | 15893728 | 15893959 | 15893728 | ID=Msa0443820-mRNA-1:exon:3336;Parent=Msa0443820-mRNA-1 |
| chr3_3 | five_prime_UTR | 15884785 | 15884924 | 15884785 | ID=Msa0443820-mRNA-1:five_prime_utr;Parent=Msa0443820-mRNA-1 |
| chr3_3 | five_prime_UTR | 15888515 | 15888601 | 15888515 | ID=Msa0443820-mRNA-1:five_prime_utr;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15888602 | 15888681 | 15888602 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15889477 | 15889598 | 15889477 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15889930 | 15890205 | 15889930 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15890441 | 15890637 | 15890441 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15890748 | 15890883 | 15890748 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15892049 | 15892212 | 15892049 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15892303 | 15892491 | 15892303 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15892611 | 15892706 | 15892611 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15892808 | 15892929 | 15892808 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | CDS | 15893432 | 15893486 | 15893432 | ID=Msa0443820-mRNA-1:cds;Parent=Msa0443820-mRNA-1 |
| chr3_3 | three_prime_UTR | 15893487 | 15893688 | 15893487 | ID=Msa0443820-mRNA-1:three_prime_utr;Parent=Msa0443820-mRNA-1 |
| chr3_3 | three_prime_UTR | 15893728 | 15893959 | 15893728 | ID=Msa0443820-mRNA-1:three_prime_utr;Parent=Msa0443820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
