Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430450 | XP_003601588.1 | 86.853 | 251 | 29 | 2 | 1 | 247 | 1 | 251 | 7.25e-147 | 420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430450 | G7J9K0 | 86.853 | 251 | 29 | 2 | 1 | 247 | 1 | 251 | 3.46e-147 | 420 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001540 | Msa1430450 | 0.808791 | 2.602991e-50 | -8.615850e-47 |
| Msa0025830 | Msa1430450 | 0.827945 | 1.181700e-54 | -8.615850e-47 |
| Msa0032700 | Msa1430450 | 0.806905 | 6.553781e-50 | -8.615850e-47 |
| Msa0047400 | Msa1430450 | 0.802495 | 5.459441e-49 | -8.615850e-47 |
| Msa0064310 | Msa1430450 | 0.806351 | 8.581617e-50 | -8.615850e-47 |
| Msa0073350 | Msa1430450 | 0.801238 | 9.892097e-49 | -8.615850e-47 |
| Msa0076100 | Msa1430450 | 0.818783 | 1.637196e-52 | -8.615850e-47 |
| Msa0076990 | Msa1430450 | 0.801202 | 1.006403e-48 | -8.615850e-47 |
| Msa0079100 | Msa1430450 | 0.809448 | 1.883240e-50 | -8.615850e-47 |
| Msa0120120 | Msa1430450 | 0.806985 | 6.305365e-50 | -8.615850e-47 |
| Msa1372680 | Msa1430450 | 0.805405 | 1.356091e-49 | -8.615850e-47 |
| Msa1375600 | Msa1430450 | 0.823975 | 1.036644e-53 | -8.615850e-47 |
| Msa1376560 | Msa1430450 | 0.820232 | 7.645852e-53 | -8.615850e-47 |
| Msa1393550 | Msa1430450 | 0.806809 | 6.869272e-50 | -8.615850e-47 |
| Msa1400830 | Msa1430450 | 0.826940 | 2.059256e-54 | -8.615850e-47 |
| Msa1413360 | Msa1430450 | 0.816636 | 4.992716e-52 | -8.615850e-47 |
| Msa1418780 | Msa1430450 | 0.801640 | 8.186798e-49 | -8.615850e-47 |
| Msa1419620 | Msa1430450 | 0.817846 | 2.667605e-52 | -8.615850e-47 |
| Msa1420590 | Msa1430450 | 0.819150 | 1.350937e-52 | -8.615850e-47 |
| Msa1425530 | Msa1430450 | 0.817679 | 2.910281e-52 | -8.615850e-47 |
| Msa1426310 | Msa1430450 | 0.806916 | 6.518482e-50 | -8.615850e-47 |
| Msa1430450 | Msa1452800 | 0.801964 | 7.022814e-49 | -8.615850e-47 |
| Msa1430450 | Msa1455560 | 0.835266 | 1.855030e-56 | -8.615850e-47 |
| Msa0619870 | Msa1430450 | 0.837565 | 4.821953e-57 | -8.615850e-47 |
| Msa0625820 | Msa1430450 | 0.808655 | 2.783164e-50 | -8.615850e-47 |
| Msa0659360 | Msa1430450 | 0.801592 | 8.371440e-49 | -8.615850e-47 |
| Msa0704790 | Msa1430450 | 0.803288 | 3.743780e-49 | -8.615850e-47 |
| Msa0706450 | Msa1430450 | 0.802873 | 4.563668e-49 | -8.615850e-47 |
| Msa0706490 | Msa1430450 | 0.820093 | 8.227851e-53 | -8.615850e-47 |
| Msa0707270 | Msa1430450 | 0.806690 | 7.279180e-50 | -8.615850e-47 |
| Msa0749940 | Msa1430450 | 0.832618 | 8.530765e-56 | -8.615850e-47 |
| Msa0751540 | Msa1430450 | 0.826112 | 3.244335e-54 | -8.615850e-47 |
| Msa0793530 | Msa1430450 | 0.800356 | 1.497583e-48 | -8.615850e-47 |
| Msa0796840 | Msa1430450 | 0.829994 | 3.768710e-55 | -8.615850e-47 |
| Msa0798500 | Msa1430450 | 0.825973 | 3.499581e-54 | -8.615850e-47 |
| Msa0816860 | Msa1430450 | 0.824984 | 6.002728e-54 | -8.615850e-47 |
| Msa0832270 | Msa1430450 | 0.814109 | 1.820868e-51 | -8.615850e-47 |
| Msa0133390 | Msa1430450 | 0.824235 | 9.006805e-54 | -8.615850e-47 |
| Msa0135400 | Msa1430450 | 0.804549 | 2.048097e-49 | -8.615850e-47 |
| Msa0169320 | Msa1430450 | 0.802965 | 4.368347e-49 | -8.615850e-47 |
| Msa0179200 | Msa1430450 | 0.804053 | 2.597655e-49 | -8.615850e-47 |
| Msa0181560 | Msa1430450 | 0.825055 | 5.775206e-54 | -8.615850e-47 |
| Msa0184800 | Msa1430450 | 0.820883 | 5.419060e-53 | -8.615850e-47 |
| Msa0184900 | Msa1430450 | 0.818689 | 1.718933e-52 | -8.615850e-47 |
| Msa0199160 | Msa1430450 | 0.813164 | 2.940204e-51 | -8.615850e-47 |
| Msa0216390 | Msa1430450 | 0.814284 | 1.666328e-51 | -8.615850e-47 |
| Msa0217300 | Msa1430450 | 0.803083 | 4.128960e-49 | -8.615850e-47 |
| Msa1244380 | Msa1430450 | 0.821539 | 3.826445e-53 | -8.615850e-47 |
| Msa1245410 | Msa1430450 | 0.806704 | 7.228983e-50 | -8.615850e-47 |
| Msa1267560 | Msa1430450 | 0.823050 | 1.706078e-53 | -8.615850e-47 |
| Msa0367380 | Msa1430450 | 0.809483 | 1.850699e-50 | -8.615850e-47 |
| Msa0368430 | Msa1430450 | 0.807362 | 5.245581e-50 | -8.615850e-47 |
| Msa0380440 | Msa1430450 | 0.802227 | 6.200123e-49 | -8.615850e-47 |
| Msa0400060 | Msa1430450 | -0.811381 | 7.203915e-51 | -8.615850e-47 |
| Msa0404900 | Msa1430450 | 0.828787 | 7.402652e-55 | -8.615850e-47 |
| Msa0412470 | Msa1430450 | 0.811293 | 7.526068e-51 | -8.615850e-47 |
| Msa0415930 | Msa1430450 | 0.810127 | 1.344914e-50 | -8.615850e-47 |
| Msa0417140 | Msa1430450 | 0.805804 | 1.118503e-49 | -8.615850e-47 |
| Msa0421230 | Msa1430450 | 0.823204 | 1.570897e-53 | -8.615850e-47 |
| Msa0450920 | Msa1430450 | 0.820147 | 7.996507e-53 | -8.615850e-47 |
| Msa0463980 | Msa1430450 | 0.803690 | 3.090803e-49 | -8.615850e-47 |
| Msa0467980 | Msa1430450 | 0.853439 | 2.388759e-61 | -8.615850e-47 |
| Msa0475130 | Msa1430450 | 0.819546 | 1.097415e-52 | -8.615850e-47 |
| Msa0480150 | Msa1430450 | 0.812281 | 4.588664e-51 | -8.615850e-47 |
| Msa1033250 | Msa1430450 | 0.822099 | 2.839153e-53 | -8.615850e-47 |
| Msa1040070 | Msa1430450 | 0.802089 | 6.620656e-49 | -8.615850e-47 |
| Msa1072850 | Msa1430450 | 0.813076 | 3.073839e-51 | -8.615850e-47 |
| Msa0241940 | Msa1430450 | 0.819941 | 8.914173e-53 | -8.615850e-47 |
| Msa0256590 | Msa1430450 | 0.816494 | 5.371988e-52 | -8.615850e-47 |
| Msa0306160 | Msa1430450 | 0.834661 | 2.634003e-56 | -8.615850e-47 |
| Msa0316330 | Msa1430450 | 0.837426 | 5.234137e-57 | -8.615850e-47 |
| Msa0318280 | Msa1430450 | 0.806502 | 7.972827e-50 | -8.615850e-47 |
| Msa0334280 | Msa1430450 | 0.811012 | 8.661646e-51 | -8.615850e-47 |
| Msa0347060 | Msa1430450 | 0.821541 | 3.822076e-53 | -8.615850e-47 |
| Msa1113460 | Msa1430450 | 0.808375 | 3.194385e-50 | -8.615850e-47 |
| Msa1128200 | Msa1430450 | 0.826563 | 2.532937e-54 | -8.615850e-47 |
| Msa1161060 | Msa1430450 | 0.808308 | 3.302014e-50 | -8.615850e-47 |
| Msa0486200 | Msa1430450 | 0.806308 | 8.760023e-50 | -8.615850e-47 |
| Msa0513590 | Msa1430450 | 0.870818 | 1.094270e-66 | -8.615850e-47 |
| Msa0575670 | Msa1430450 | 0.844815 | 5.984811e-59 | -8.615850e-47 |
| Msa0585770 | Msa1430450 | 0.800900 | 1.160280e-48 | -8.615850e-47 |
| Msa0600940 | Msa1430450 | 0.822969 | 1.782060e-53 | -8.615850e-47 |
| Msa0876270 | Msa1430450 | 0.841878 | 3.637622e-58 | -8.615850e-47 |
| Msa0934800 | Msa1430450 | 0.802373 | 5.786956e-49 | -8.615850e-47 |
| Msa0967890 | Msa1430450 | 0.803097 | 4.101808e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430450 | MtrunA17_Chr3g0121111 | 86.853 | 251 | 29 | 2 | 1 | 247 | 1 | 251 | 6.67e-151 | 420 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430450 | AT3G32930.2 | 63.934 | 244 | 83 | 3 | 9 | 247 | 6 | 249 | 5.38e-109 | 314 |
| Msa1430450 | AT3G32930.1 | 63.934 | 244 | 83 | 3 | 9 | 247 | 6 | 249 | 5.38e-109 | 314 |
Find 82 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGCTAGCTTGTAAATAT+TGG | 0.218242 | tig0026659:-27994 | Msa1430450:three_prime_UTR |
| CCTTCTGTTTGAGCCTTCTT+TGG | 0.255484 | tig0026659:-28042 | Msa1430450:exon |
| TAGGATGCCATTTGCTCTTA+AGG | 0.271455 | tig0026659:+28470 | None:intergenic |
| TAAGTGCTTTCTACAAAATA+AGG | 0.278435 | tig0026659:+27885 | None:intergenic |
| TTCCACAAATCCCTTCTTCC+TGG | 0.294040 | tig0026659:-30397 | Msa1430450:CDS |
| GTGACTTAGGGTTCTCTAAA+TGG | 0.308895 | tig0026659:-30090 | Msa1430450:CDS |
| AAGAAGAAGAGGAGTGAGTT+GGG | 0.337925 | tig0026659:+30611 | None:intergenic |
| CTGAGTGTACCCTTGGTTGT+AGG | 0.345170 | tig0026659:+28451 | None:intergenic |
| CCTGAGAGAATCGGGTTTGA+TGG | 0.354081 | tig0026659:+30235 | None:intergenic |
| AATGAATCTGGTGGTGACTT+AGG | 0.370530 | tig0026659:-30103 | Msa1430450:CDS |
| AGGTAACATGTTATTTGTCT+TGG | 0.383167 | tig0026659:+27905 | None:intergenic |
| ACATTACACTTGCATTTATC+CGG | 0.385350 | tig0026659:-30578 | Msa1430450:five_prime_UTR |
| AGCACGGGTAGTGGGTGTTC+TGG | 0.386528 | tig0026659:+30339 | None:intergenic |
| TACTACGCCCTTCTCAAAAC+TGG | 0.396977 | tig0026659:-30271 | Msa1430450:CDS |
| ATCCTACCAACCCACAGAAC+TGG | 0.421635 | tig0026659:+30301 | None:intergenic |
| CTTCTCAAAACTGGCTTCGT+TGG | 0.431395 | tig0026659:-30262 | Msa1430450:CDS |
| CTGTTAAAACCTGAGAGAAT+CGG | 0.432870 | tig0026659:+30226 | None:intergenic |
| TGTTAAAACCTGAGAGAATC+GGG | 0.436206 | tig0026659:+30227 | None:intergenic |
| GTTCCTTCTGAGTGTACCCT+TGG | 0.438395 | tig0026659:+28444 | None:intergenic |
| CCATCAAACCCGATTCTCTC+AGG | 0.439133 | tig0026659:-30235 | Msa1430450:intron |
| TTGTGGAAGATGGTTGAAGA+AGG | 0.447962 | tig0026659:+30412 | None:intergenic |
| CTAAAGCTGAGAAGCTTGAG+AGG | 0.456579 | tig0026659:-28080 | Msa1430450:CDS |
| AAATGGACGCAGGTCATACT+AGG | 0.458716 | tig0026659:-30073 | Msa1430450:CDS |
| AAGAAGGGATTTGTGGAAGA+TGG | 0.459619 | tig0026659:+30402 | None:intergenic |
| CGTCGCCCCTCTGACTTGGA+TGG | 0.461976 | tig0026659:+28412 | None:intergenic |
| TGCTTGAAACTCCAGTTCTG+TGG | 0.462622 | tig0026659:-30312 | Msa1430450:CDS |
| GAAGAAGAAGAGGAGTGAGT+TGG | 0.462750 | tig0026659:+30610 | None:intergenic |
| ATGAATCTGGTGGTGACTTA+GGG | 0.468357 | tig0026659:-30102 | Msa1430450:CDS |
| GCTAGTGACAATAATGAATC+TGG | 0.475678 | tig0026659:-30115 | Msa1430450:CDS |
| AAGCAGAGAAGCACGGGTAG+TGG | 0.477607 | tig0026659:+30330 | None:intergenic |
| AACCAGGAAGAAGGGATTTG+TGG | 0.486657 | tig0026659:+30395 | None:intergenic |
| TTTACTTCAGATTTGGACAT+TGG | 0.488430 | tig0026659:-30142 | Msa1430450:intron |
| GTGTAATCCTTGTCACTAAG+AGG | 0.491997 | tig0026659:+28102 | None:intergenic |
| GATGGTTGAAGAAGGATTGT+GGG | 0.492916 | tig0026659:+30420 | None:intergenic |
| TAGGGAACCTTAAGAGCAAA+TGG | 0.495076 | tig0026659:-28477 | Msa1430450:CDS |
| AGGATTGTGGGAGTGAAAGG+TGG | 0.504173 | tig0026659:+30432 | None:intergenic |
| AAGTCGTCGCCCCTCTGACT+TGG | 0.505603 | tig0026659:+28408 | None:intergenic |
| CTAAGAGGTCCAGCAGGAAA+AGG | 0.508425 | tig0026659:+28117 | None:intergenic |
| AGTTTCAAGCAGAGAAGCAC+GGG | 0.515837 | tig0026659:+30324 | None:intergenic |
| AAGTAGCAAAACCAGGAAGA+AGG | 0.520024 | tig0026659:+30386 | None:intergenic |
| CAAATGGCATCCTACAACCA+AGG | 0.526099 | tig0026659:-28461 | Msa1430450:CDS |
| GCTTGAAACTCCAGTTCTGT+GGG | 0.526173 | tig0026659:-30311 | Msa1430450:CDS |
| GTCGCCCCTCTGACTTGGAT+GGG | 0.530631 | tig0026659:+28413 | None:intergenic |
| ATTCGAAGAGAAAGTGCTCA+TGG | 0.530994 | tig0026659:-28216 | Msa1430450:CDS |
| AAAACGAGAAACACCAAAGA+AGG | 0.535811 | tig0026659:+28029 | None:intergenic |
| GAAACTCCAGTTCTGTGGGT+TGG | 0.542812 | tig0026659:-30307 | Msa1430450:CDS |
| GCAAAGGAAGGAGCTAGCGT+AGG | 0.543999 | tig0026659:-28496 | Msa1430450:CDS |
| TAACAGCAAGGAAGAAGAAG+AGG | 0.547277 | tig0026659:+30600 | None:intergenic |
| GTAAAATAGAGTTATCCAAA+AGG | 0.549666 | tig0026659:-30663 | Msa1430450:five_prime_UTR |
| CTCCAGTTCTGTGGGTTGGT+AGG | 0.555330 | tig0026659:-30303 | Msa1430450:CDS |
| CAAAGGAAGGAGCTAGCGTA+GGG | 0.556026 | tig0026659:-28495 | Msa1430450:CDS |
| ATTGCAAACCTTGTGAGAAG+TGG | 0.556246 | tig0026659:+28336 | None:intergenic |
| AGAAGGATTGTGGGAGTGAA+AGG | 0.556329 | tig0026659:+30429 | None:intergenic |
| ATCTGACAGTAGAGATGCAA+TGG | 0.557601 | tig0026659:+28378 | None:intergenic |
| AGCAGAGAAGCACGGGTAGT+GGG | 0.558705 | tig0026659:+30331 | None:intergenic |
| TGTTGATGCCACTTCTCACA+AGG | 0.563180 | tig0026659:-28344 | Msa1430450:intron |
| AGATGGTTGAAGAAGGATTG+TGG | 0.566949 | tig0026659:+30419 | None:intergenic |
| TCCACAATGAGATGAGGAGT+TGG | 0.577242 | tig0026659:+28147 | None:intergenic |
| TTTATTTGGTCAGCAAAGGA+AGG | 0.581512 | tig0026659:-28508 | Msa1430450:intron |
| AGTAGCAAAACCAGGAAGAA+GGG | 0.581693 | tig0026659:+30387 | None:intergenic |
| TGCTGGACCTCTTAGTGACA+AGG | 0.585319 | tig0026659:-28109 | Msa1430450:CDS |
| CCAAAGAAGGCTCAAACAGA+AGG | 0.589954 | tig0026659:+28042 | None:intergenic |
| TTGTCACTAAGAGGTCCAGC+AGG | 0.590375 | tig0026659:+28111 | None:intergenic |
| GAGTTTCAAGCAGAGAAGCA+CGG | 0.595366 | tig0026659:+30323 | None:intergenic |
| CAACCAAGGGTACACTCAGA+AGG | 0.601547 | tig0026659:-28447 | Msa1430450:CDS |
| AGAGTCCCATCCAAGTCAGA+GGG | 0.604117 | tig0026659:-28418 | Msa1430450:CDS |
| TACACTGTCACAAGTGACAC+CGG | 0.612774 | tig0026659:+30559 | None:intergenic |
| TAGAGTCCCATCCAAGTCAG+AGG | 0.616200 | tig0026659:-28419 | Msa1430450:CDS |
| CAGGTCATACTAGGAAAACC+AGG | 0.632593 | tig0026659:-30064 | Msa1430450:intron |
| GCAAATCACTACCACCGCAA+CGG | 0.638261 | tig0026659:-30479 | Msa1430450:CDS |
| AAGAAAAGAGACCGTTGCGG+TGG | 0.643036 | tig0026659:+30468 | None:intergenic |
| ACCAACTCCTCATCTCATTG+TGG | 0.648776 | tig0026659:-28148 | Msa1430450:CDS |
| GCAAGTGTAATGTAACAGCA+AGG | 0.649964 | tig0026659:+30588 | None:intergenic |
| GAGGGTGAAGTAGCAAAACC+AGG | 0.650465 | tig0026659:+30379 | None:intergenic |
| GTGATCTCCACAATGAGATG+AGG | 0.651259 | tig0026659:+28141 | None:intergenic |
| AGGGTTCTCTAAATGGACGC+AGG | 0.656865 | tig0026659:-30083 | Msa1430450:CDS |
| TAAAGCTGAGAAGCTTGAGA+GGG | 0.670330 | tig0026659:-28079 | Msa1430450:CDS |
| GAGAAGTGGCATCAACAAAG+TGG | 0.671337 | tig0026659:+28350 | None:intergenic |
| AAATGGCATCCTACAACCAA+GGG | 0.672811 | tig0026659:-28460 | Msa1430450:CDS |
| AGTGACAATAATGAATCTGG+TGG | 0.727205 | tig0026659:-30112 | Msa1430450:CDS |
| ATGAAGAAAAGAGACCGTTG+CGG | 0.743550 | tig0026659:+30465 | None:intergenic |
| GAGTCCCATCCAAGTCAGAG+GGG | 0.757747 | tig0026659:-28417 | Msa1430450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCTAAAAAAAAAAAAAACTT+CGG | + | tig0026659:28815-28834 | None:intergenic | 15.0% |
| !!! | TTATTTCTACTTGTTTTATT+TGG | - | tig0026659:30028-30047 | Msa1430450:intron | 15.0% |
| !!! | TTCATTTTTTACTTCAGATT+TGG | - | tig0026659:28401-28420 | Msa1430450:CDS | 20.0% |
| !!! | CCGAAGTTTTTTTTTTTTTT+AGG | - | tig0026659:28812-28831 | Msa1430450:intron | 20.0% |
| !!! | TTAGAGTATCTTATGTAATA+GGG | + | tig0026659:29595-29614 | None:intergenic | 20.0% |
| !!! | TTTAGAGTATCTTATGTAAT+AGG | + | tig0026659:29596-29615 | None:intergenic | 20.0% |
| !! | TAAGTTAAAAAAGGATTTGA+AGG | + | tig0026659:29731-29750 | None:intergenic | 20.0% |
| !!! | TATTTTATAGTTACATGACA+TGG | + | tig0026659:29838-29857 | None:intergenic | 20.0% |
| ! | AAAAAAATTAACCCCAGTAA+AGG | + | tig0026659:28371-28390 | None:intergenic | 25.0% |
| ! | AGTAGCAATTATATAACTAC+TGG | - | tig0026659:28596-28615 | Msa1430450:intron | 25.0% |
| !! | CAACTTGATTTCTTACATTT+TGG | - | tig0026659:28915-28934 | Msa1430450:intron | 25.0% |
| !!! | TTCTTACATTTTGGTTTAGT+TGG | - | tig0026659:28924-28943 | Msa1430450:intron | 25.0% |
| !!! | TCTTACATTTTGGTTTAGTT+GGG | - | tig0026659:28925-28944 | Msa1430450:intron | 25.0% |
| ! | CTATCAATAGGTCTAATTTA+CGG | - | tig0026659:29399-29418 | Msa1430450:intron | 25.0% |
| ! | TGAACAGCATAAGTTAAAAA+AGG | + | tig0026659:29740-29759 | None:intergenic | 25.0% |
| !!! | TTTTTAACTTATGCTGTTCA+CGG | - | tig0026659:29740-29759 | Msa1430450:intron | 25.0% |
| ! | GATGGAAGCAAAAATAAAAA+TGG | + | tig0026659:29784-29803 | None:intergenic | 25.0% |
| ! | AATATGGAAGGTAATGTTAA+AGG | + | tig0026659:29953-29972 | None:intergenic | 25.0% |
| ! | TTTAACATTACCTTCCATAT+TGG | - | tig0026659:29952-29971 | Msa1430450:intron | 25.0% |
| ! | TTAACATTACCTTCCATATT+GGG | - | tig0026659:29953-29972 | Msa1430450:intron | 25.0% |
| ! | ATTGTAACAAAAAGACACTT+TGG | + | tig0026659:29999-30018 | None:intergenic | 25.0% |
| !! | CAATTTTCATTTGTCTGTTT+CGG | - | tig0026659:30233-30252 | Msa1430450:intron | 25.0% |
| ! | ATCTTATCCTCATAAATTGA+TGG | - | tig0026659:30283-30302 | Msa1430450:CDS | 25.0% |
| ACATTACACTTGCATTTATC+CGG | - | tig0026659:27972-27991 | Msa1430450:three_prime_UTR | 30.0% | |
| GTAAAGGAAGAATGCTAAAA+TGG | + | tig0026659:28355-28374 | None:intergenic | 30.0% | |
| ! | TTTTAGCATTCTTCCTTTAC+TGG | - | tig0026659:28355-28374 | Msa1430450:CDS | 30.0% |
| TTTAGCATTCTTCCTTTACT+GGG | - | tig0026659:28356-28375 | Msa1430450:CDS | 30.0% | |
| TTTACTTCAGATTTGGACAT+TGG | - | tig0026659:28408-28427 | Msa1430450:CDS | 30.0% | |
| AGCAATTATATAACTACTGG+TGG | - | tig0026659:28599-28618 | Msa1430450:intron | 30.0% | |
| ATCTGTGAATGCAAAGAATT+AGG | - | tig0026659:28740-28759 | Msa1430450:intron | 30.0% | |
| GGATAATAACTATTGTAGAG+AGG | - | tig0026659:28772-28791 | Msa1430450:intron | 30.0% | |
| ! | AAAAAAAAACTTCGGCTTGT+TGG | + | tig0026659:28807-28826 | None:intergenic | 30.0% |
| ! | GAGGCTGAACAATATATTTT+TGG | - | tig0026659:28855-28874 | Msa1430450:intron | 30.0% |
| !!! | GAACAATATATTTTTGGCCA+AGG | - | tig0026659:28861-28880 | Msa1430450:intron | 30.0% |
| !!! | CTTACATTTTGGTTTAGTTG+GGG | - | tig0026659:28926-28945 | Msa1430450:intron | 30.0% |
| AGGATAGGAGATAATGTTAA+AGG | - | tig0026659:29016-29035 | Msa1430450:intron | 30.0% | |
| ATAATGTTAAAGGCAAACCT+AGG | - | tig0026659:29026-29045 | Msa1430450:intron | 30.0% | |
| ATCTGTCATTACCAACTATA+AGG | + | tig0026659:29071-29090 | None:intergenic | 30.0% | |
| CTAGGATATTTCATTCTACA+AGG | + | tig0026659:29117-29136 | None:intergenic | 30.0% | |
| ! | AATGTCTTTAGAGATCCTTA+AGG | - | tig0026659:29202-29221 | Msa1430450:intron | 30.0% |
| CAGGGTAATAATAAACCTTA+AGG | + | tig0026659:29220-29239 | None:intergenic | 30.0% | |
| TTTATTATTACCCTGAACAC+AGG | - | tig0026659:29225-29244 | Msa1430450:intron | 30.0% | |
| AACTCATACCTCGATAATAA+TGG | + | tig0026659:29257-29276 | None:intergenic | 30.0% | |
| CTATTGATAGGACTAGAATA+TGG | + | tig0026659:29389-29408 | None:intergenic | 30.0% | |
| CATATTCTAGTCCTATCAAT+AGG | - | tig0026659:29387-29406 | Msa1430450:intron | 30.0% | |
| CGTAAATTAGACCTATTGAT+AGG | + | tig0026659:29401-29420 | None:intergenic | 30.0% | |
| ! | GATATCATGTTGGAAGTATA+AGG | - | tig0026659:29474-29493 | Msa1430450:intron | 30.0% |
| !! | GTATAAGGTTTTAGTCTTTG+AGG | - | tig0026659:29489-29508 | Msa1430450:intron | 30.0% |
| !! | TTTAGTCTTTGAGGTATAGA+TGG | - | tig0026659:29498-29517 | Msa1430450:intron | 30.0% |
| ACAAGTTTGATAAGAAGAGT+TGG | - | tig0026659:29862-29881 | Msa1430450:intron | 30.0% | |
| ! | GGAAGTACAAAACATATGTT+CGG | - | tig0026659:29900-29919 | Msa1430450:intron | 30.0% |
| !!! | TTGTTTTATTTGGTCAGCAA+AGG | - | tig0026659:30038-30057 | Msa1430450:intron | 30.0% |
| TTTAGTGCCATCAATTTATG+AGG | + | tig0026659:30293-30312 | None:intergenic | 30.0% | |
| ! | CTTTGCTAGCTTGTAAATAT+TGG | - | tig0026659:30556-30575 | Msa1430450:five_prime_UTR | 30.0% |
| ! | AGGTAACATGTTATTTGTCT+TGG | + | tig0026659:30648-30667 | None:intergenic | 30.0% |
| ! | CTTTTTGTCGCTATTCCTTT+TGG | + | tig0026659:27905-27924 | None:intergenic | 35.0% |
| !!! | GTTTTTTTGAGGGAAATGGA+GGG | + | tig0026659:28192-28211 | None:intergenic | 35.0% |
| !!! | TCTGGTTTTTTTGAGGGAAA+TGG | + | tig0026659:28196-28215 | None:intergenic | 35.0% |
| TGTTAAAACCTGAGAGAATC+GGG | + | tig0026659:28326-28345 | None:intergenic | 35.0% | |
| CTGTTAAAACCTGAGAGAAT+CGG | + | tig0026659:28327-28346 | None:intergenic | 35.0% | |
| TTAGCATTCTTCCTTTACTG+GGG | - | tig0026659:28357-28376 | Msa1430450:CDS | 35.0% | |
| GCTAGTGACAATAATGAATC+TGG | - | tig0026659:28435-28454 | Msa1430450:CDS | 35.0% | |
| AGTGACAATAATGAATCTGG+TGG | - | tig0026659:28438-28457 | Msa1430450:CDS | 35.0% | |
| AAGTGATCAATCGCAAAGTA+GGG | + | tig0026659:28515-28534 | None:intergenic | 35.0% | |
| !!! | GTAACTCATTAGCTTTTGCT+CGG | - | tig0026659:28648-28667 | Msa1430450:intron | 35.0% |
| !!! | TAACTCATTAGCTTTTGCTC+GGG | - | tig0026659:28649-28668 | Msa1430450:intron | 35.0% |
| GTTTGTGTATGTAAGAAAGC+AGG | - | tig0026659:28675-28694 | Msa1430450:intron | 35.0% | |
| TCTTTGCATTCACAGATTGT+TGG | + | tig0026659:28737-28756 | None:intergenic | 35.0% | |
| !!! | AATTTTGAAACCGCAAGTGA+TGG | - | tig0026659:28887-28906 | Msa1430450:intron | 35.0% |
| AGTTGAAATTCCATCACTTG+CGG | + | tig0026659:28900-28919 | None:intergenic | 35.0% | |
| GGATCTGACTATGCAAATAA+AGG | - | tig0026659:28989-29008 | Msa1430450:intron | 35.0% | |
| ! | ACTATGCAAATAAAGGTGTG+AGG | - | tig0026659:28996-29015 | Msa1430450:intron | 35.0% |
| TGAGTTGTATTCCAAATCTG+AGG | - | tig0026659:29271-29290 | Msa1430450:intron | 35.0% | |
| ! | TTCCAAATCTGAGGTCATAT+AGG | - | tig0026659:29280-29299 | Msa1430450:intron | 35.0% |
| AACCTATATGACCTCAGATT+TGG | + | tig0026659:29285-29304 | None:intergenic | 35.0% | |
| TGTTAGCTGCAGGTATTATT+AGG | - | tig0026659:29351-29370 | Msa1430450:intron | 35.0% | |
| CTTCCAACATGATATCAATG+TGG | + | tig0026659:29470-29489 | None:intergenic | 35.0% | |
| AGCTGAGTTTATGAGATAGA+TGG | + | tig0026659:29704-29723 | None:intergenic | 35.0% | |
| AGTTGGATTATACTAGAGAC+AGG | - | tig0026659:29879-29898 | Msa1430450:intron | 35.0% | |
| TTTATTTGGTCAGCAAAGGA+AGG | - | tig0026659:30042-30061 | Msa1430450:intron | 35.0% | |
| AAAACGAGAAACACCAAAGA+AGG | + | tig0026659:30524-30543 | None:intergenic | 35.0% | |
| AAGAAGAAGAGGAGTGAGTT+GGG | + | tig0026659:27942-27961 | None:intergenic | 40.0% | |
| TAACAGCAAGGAAGAAGAAG+AGG | + | tig0026659:27953-27972 | None:intergenic | 40.0% | |
| GCAAGTGTAATGTAACAGCA+AGG | + | tig0026659:27965-27984 | None:intergenic | 40.0% | |
| ATGAAGAAAAGAGACCGTTG+CGG | + | tig0026659:28088-28107 | None:intergenic | 40.0% | |
| GATGGTTGAAGAAGGATTGT+GGG | + | tig0026659:28133-28152 | None:intergenic | 40.0% | |
| AGATGGTTGAAGAAGGATTG+TGG | + | tig0026659:28134-28153 | None:intergenic | 40.0% | |
| TTGTGGAAGATGGTTGAAGA+AGG | + | tig0026659:28141-28160 | None:intergenic | 40.0% | |
| AAGAAGGGATTTGTGGAAGA+TGG | + | tig0026659:28151-28170 | None:intergenic | 40.0% | |
| AGTAGCAAAACCAGGAAGAA+GGG | + | tig0026659:28166-28185 | None:intergenic | 40.0% | |
| AAGTAGCAAAACCAGGAAGA+AGG | + | tig0026659:28167-28186 | None:intergenic | 40.0% | |
| !!! | GGTTTTTTTGAGGGAAATGG+AGG | + | tig0026659:28193-28212 | None:intergenic | 40.0% |
| !!! | GGGTGTTCTGGTTTTTTTGA+GGG | + | tig0026659:28202-28221 | None:intergenic | 40.0% |
| !!! | TGGGTGTTCTGGTTTTTTTG+AGG | + | tig0026659:28203-28222 | None:intergenic | 40.0% |
| !!! | AACGAAGCCAGTTTTGAGAA+GGG | + | tig0026659:28289-28308 | None:intergenic | 40.0% |
| ! | AATGAATCTGGTGGTGACTT+AGG | - | tig0026659:28447-28466 | Msa1430450:CDS | 40.0% |
| ! | ATGAATCTGGTGGTGACTTA+GGG | - | tig0026659:28448-28467 | Msa1430450:CDS | 40.0% |
| GTGACTTAGGGTTCTCTAAA+TGG | - | tig0026659:28460-28479 | Msa1430450:CDS | 40.0% | |
| GAAGTGATCAATCGCAAAGT+AGG | + | tig0026659:28516-28535 | None:intergenic | 40.0% | |
| GATCACTTCATGCTTCATAG+TGG | - | tig0026659:28527-28546 | Msa1430450:intron | 40.0% | |
| ! | TTCATGCTTCATAGTGGAAC+TGG | - | tig0026659:28533-28552 | Msa1430450:intron | 40.0% |
| TTGTTGGATGCATCCATACA+CGG | + | tig0026659:28721-28740 | None:intergenic | 40.0% | |
| !! | ATGTCAGTTCTCTAAAGCAG+AGG | - | tig0026659:28836-28855 | Msa1430450:intron | 40.0% |
| GCGGTTTCAAAATTACTCCT+TGG | + | tig0026659:28881-28900 | None:intergenic | 40.0% | |
| !!! | ACATTTTGGTTTAGTTGGGG+TGG | - | tig0026659:28929-28948 | Msa1430450:intron | 40.0% |
| !!! | CATTTTGGTTTAGTTGGGGT+GGG | - | tig0026659:28930-28949 | Msa1430450:intron | 40.0% |
| !!! | ATTTTGGTTTAGTTGGGGTG+GGG | - | tig0026659:28931-28950 | Msa1430450:intron | 40.0% |
| ! | GCAAATAAAGGTGTGAGGAT+AGG | - | tig0026659:29001-29020 | Msa1430450:intron | 40.0% |
| ATCTGCAGCATCCTTATAGT+TGG | - | tig0026659:29057-29076 | Msa1430450:intron | 40.0% | |
| !! | CTCTGAAATCACTCCAAACT+CGG | + | tig0026659:29152-29171 | None:intergenic | 40.0% |
| GGATCATGCCATTATTATCG+AGG | - | tig0026659:29246-29265 | Msa1430450:intron | 40.0% | |
| TAGGTTACCTAACCATCAGA+AGG | - | tig0026659:29299-29318 | Msa1430450:intron | 40.0% | |
| GATAGGACTAGAATATGGAC+TGG | + | tig0026659:29384-29403 | None:intergenic | 40.0% | |
| TAATTTACGGAACTCAGCAG+CGG | - | tig0026659:29412-29431 | Msa1430450:intron | 40.0% | |
| GTGCCACATTGATATCATGT+TGG | - | tig0026659:29464-29483 | Msa1430450:intron | 40.0% | |
| ! | GTGTGTGACATTTAGAGTGT+TGG | + | tig0026659:29667-29686 | None:intergenic | 40.0% |
| TAGGGAACCTTAAGAGCAAA+TGG | - | tig0026659:30073-30092 | Msa1430450:CDS | 40.0% | |
| ! | TAGGATGCCATTTGCTCTTA+AGG | + | tig0026659:30083-30102 | None:intergenic | 40.0% |
| AAATGGCATCCTACAACCAA+GGG | - | tig0026659:30090-30109 | Msa1430450:CDS | 40.0% | |
| ATCTGACAGTAGAGATGCAA+TGG | + | tig0026659:30175-30194 | None:intergenic | 40.0% | |
| ATTGCAAACCTTGTGAGAAG+TGG | + | tig0026659:30217-30236 | None:intergenic | 40.0% | |
| TGGCACTAAATGACCATTGT+AGG | - | tig0026659:30303-30322 | Msa1430450:CDS | 40.0% | |
| GGCACTAAATGACCATTGTA+GGG | - | tig0026659:30304-30323 | Msa1430450:CDS | 40.0% | |
| CGAATTTGACAACCCTACAA+TGG | + | tig0026659:30319-30338 | None:intergenic | 40.0% | |
| !! | ATTCGAAGAGAAAGTGCTCA+TGG | - | tig0026659:30334-30353 | Msa1430450:CDS | 40.0% |
| GTGTAATCCTTGTCACTAAG+AGG | + | tig0026659:30451-30470 | None:intergenic | 40.0% | |
| TAAAGCTGAGAAGCTTGAGA+GGG | - | tig0026659:30471-30490 | Msa1430450:CDS | 40.0% | |
| GAAGAAGAAGAGGAGTGAGT+TGG | + | tig0026659:27943-27962 | None:intergenic | 45.0% | |
| TACACTGTCACAAGTGACAC+CGG | + | tig0026659:27994-28013 | None:intergenic | 45.0% | |
| AGAAGGATTGTGGGAGTGAA+AGG | + | tig0026659:28124-28143 | None:intergenic | 45.0% | |
| TTCCACAAATCCCTTCTTCC+TGG | - | tig0026659:28153-28172 | Msa1430450:CDS | 45.0% | |
| AACCAGGAAGAAGGGATTTG+TGG | + | tig0026659:28158-28177 | None:intergenic | 45.0% | |
| ! | AGTTTCAAGCAGAGAAGCAC+GGG | + | tig0026659:28229-28248 | None:intergenic | 45.0% |
| GAGTTTCAAGCAGAGAAGCA+CGG | + | tig0026659:28230-28249 | None:intergenic | 45.0% | |
| TGCTTGAAACTCCAGTTCTG+TGG | - | tig0026659:28238-28257 | Msa1430450:intron | 45.0% | |
| GCTTGAAACTCCAGTTCTGT+GGG | - | tig0026659:28239-28258 | Msa1430450:intron | 45.0% | |
| TACTACGCCCTTCTCAAAAC+TGG | - | tig0026659:28279-28298 | Msa1430450:intron | 45.0% | |
| !!! | CAACGAAGCCAGTTTTGAGA+AGG | + | tig0026659:28290-28309 | None:intergenic | 45.0% |
| ! | CTTCTCAAAACTGGCTTCGT+TGG | - | tig0026659:28288-28307 | Msa1430450:intron | 45.0% |
| AAATGGACGCAGGTCATACT+AGG | - | tig0026659:28477-28496 | Msa1430450:CDS | 45.0% | |
| CAGGTCATACTAGGAAAACC+AGG | - | tig0026659:28486-28505 | Msa1430450:CDS | 45.0% | |
| AATCGCAAAGTAGGGATACC+TGG | + | tig0026659:28507-28526 | None:intergenic | 45.0% | |
| ATGCAAAGAATTAGGCAGCG+AGG | - | tig0026659:28748-28767 | Msa1430450:intron | 45.0% | |
| !!! | GGAAACGAGGGTCACTTTTA+TGG | - | tig0026659:28968-28987 | Msa1430450:intron | 45.0% |
| ACTCGGCAGAGGAAATAACT+AGG | + | tig0026659:29135-29154 | None:intergenic | 45.0% | |
| ! | GTTATTTCCTCTGCCGAGTT+TGG | - | tig0026659:29136-29155 | Msa1430450:intron | 45.0% |
| ! | CGAGTTTGGAGTGATTTCAG+AGG | - | tig0026659:29150-29169 | Msa1430450:intron | 45.0% |
| ATGGCATGATCCTGTGTTCA+GGG | + | tig0026659:29238-29257 | None:intergenic | 45.0% | |
| AATGGCATGATCCTGTGTTC+AGG | + | tig0026659:29239-29258 | None:intergenic | 45.0% | |
| CTGAGGACAGGAAAACTTAG+CGG | - | tig0026659:29322-29341 | Msa1430450:intron | 45.0% | |
| TGAGGACAGGAAAACTTAGC+GGG | - | tig0026659:29323-29342 | Msa1430450:intron | 45.0% | |
| !! | CTAGAATATGGACTGGAACG+AGG | + | tig0026659:29377-29396 | None:intergenic | 45.0% |
| ! | GCAAGATTGGTCACAGAAGA+TGG | - | tig0026659:29442-29461 | Msa1430450:intron | 45.0% |
| !! | TATCGAGGGGTTGATGATGA+TGG | + | tig0026659:29802-29821 | None:intergenic | 45.0% |
| TCAACCCCTCGATATGCATT+CGG | - | tig0026659:29808-29827 | Msa1430450:intron | 45.0% | |
| AGATCCGAATGCATATCGAG+GGG | + | tig0026659:29815-29834 | None:intergenic | 45.0% | |
| GAGATCCGAATGCATATCGA+GGG | + | tig0026659:29816-29835 | None:intergenic | 45.0% | |
| ! | AGTGTTGAGCCCAATATGGA+AGG | + | tig0026659:29965-29984 | None:intergenic | 45.0% |
| !! | CTTGAGTGTTGAGCCCAATA+TGG | + | tig0026659:29969-29988 | None:intergenic | 45.0% |
| CATATTGGGCTCAACACTCA+AGG | - | tig0026659:29967-29986 | Msa1430450:intron | 45.0% | |
| CAAATGGCATCCTACAACCA+AGG | - | tig0026659:30089-30108 | Msa1430450:CDS | 45.0% | |
| GAGAAGTGGCATCAACAAAG+TGG | + | tig0026659:30203-30222 | None:intergenic | 45.0% | |
| ! | TGTTGATGCCACTTCTCACA+AGG | - | tig0026659:30206-30225 | Msa1430450:intron | 45.0% |
| ACCAACTCCTCATCTCATTG+TGG | - | tig0026659:30402-30421 | Msa1430450:CDS | 45.0% | |
| TCCACAATGAGATGAGGAGT+TGG | + | tig0026659:30406-30425 | None:intergenic | 45.0% | |
| GTGATCTCCACAATGAGATG+AGG | + | tig0026659:30412-30431 | None:intergenic | 45.0% | |
| CTAAAGCTGAGAAGCTTGAG+AGG | - | tig0026659:30470-30489 | Msa1430450:CDS | 45.0% | |
| CCAAAGAAGGCTCAAACAGA+AGG | + | tig0026659:30511-30530 | None:intergenic | 45.0% | |
| CCTTCTGTTTGAGCCTTCTT+TGG | - | tig0026659:30508-30527 | Msa1430450:exon | 45.0% | |
| GCAAATCACTACCACCGCAA+CGG | - | tig0026659:28071-28090 | Msa1430450:CDS | 50.0% | |
| AAGAAAAGAGACCGTTGCGG+TGG | + | tig0026659:28085-28104 | None:intergenic | 50.0% | |
| AGGATTGTGGGAGTGAAAGG+TGG | + | tig0026659:28121-28140 | None:intergenic | 50.0% | |
| GAGGGTGAAGTAGCAAAACC+AGG | + | tig0026659:28174-28193 | None:intergenic | 50.0% | |
| GAAACTCCAGTTCTGTGGGT+TGG | - | tig0026659:28243-28262 | Msa1430450:intron | 50.0% | |
| ATCCTACCAACCCACAGAAC+TGG | + | tig0026659:28252-28271 | None:intergenic | 50.0% | |
| CCTGAGAGAATCGGGTTTGA+TGG | + | tig0026659:28318-28337 | None:intergenic | 50.0% | |
| CCATCAAACCCGATTCTCTC+AGG | - | tig0026659:28315-28334 | Msa1430450:intron | 50.0% | |
| AGGGTTCTCTAAATGGACGC+AGG | - | tig0026659:28467-28486 | Msa1430450:CDS | 50.0% | |
| CAAAGAATTAGGCAGCGAGG+AGG | - | tig0026659:28751-28770 | Msa1430450:intron | 50.0% | |
| TGACAAGCTTAGGGGAAACG+AGG | - | tig0026659:28955-28974 | Msa1430450:intron | 50.0% | |
| GACAAGCTTAGGGGAAACGA+GGG | - | tig0026659:28956-28975 | Msa1430450:intron | 50.0% | |
| AATCACTCCAAACTCGGCAG+AGG | + | tig0026659:29146-29165 | None:intergenic | 50.0% | |
| ACCTAACCATCAGAAGGCTG+AGG | - | tig0026659:29305-29324 | Msa1430450:intron | 50.0% | |
| TCCTCAGCCTTCTGATGGTT+AGG | + | tig0026659:29309-29328 | None:intergenic | 50.0% | |
| CAGCGGAATAGTGGCAAGAT+TGG | - | tig0026659:29429-29448 | Msa1430450:intron | 50.0% | |
| GGAGATCCGAATGCATATCG+AGG | + | tig0026659:29817-29836 | None:intergenic | 50.0% | |
| GGTACAGTAGCTCAGCTGTT+AGG | + | tig0026659:29932-29951 | None:intergenic | 50.0% | |
| CAAAGGAAGGAGCTAGCGTA+GGG | - | tig0026659:30055-30074 | Msa1430450:intron | 50.0% | |
| CTGAGTGTACCCTTGGTTGT+AGG | + | tig0026659:30102-30121 | None:intergenic | 50.0% | |
| ! | CAACCAAGGGTACACTCAGA+AGG | - | tig0026659:30103-30122 | Msa1430450:CDS | 50.0% |
| GTTCCTTCTGAGTGTACCCT+TGG | + | tig0026659:30109-30128 | None:intergenic | 50.0% | |
| TAGAGTCCCATCCAAGTCAG+AGG | - | tig0026659:30131-30150 | Msa1430450:CDS | 50.0% | |
| AGAGTCCCATCCAAGTCAGA+GGG | - | tig0026659:30132-30151 | Msa1430450:CDS | 50.0% | |
| ! | GAGATCACACCTTTTCCTGC+TGG | - | tig0026659:30424-30443 | Msa1430450:CDS | 50.0% |
| CTAAGAGGTCCAGCAGGAAA+AGG | + | tig0026659:30436-30455 | None:intergenic | 50.0% | |
| TTGTCACTAAGAGGTCCAGC+AGG | + | tig0026659:30442-30461 | None:intergenic | 50.0% | |
| TGCTGGACCTCTTAGTGACA+AGG | - | tig0026659:30441-30460 | Msa1430450:CDS | 50.0% | |
| ! | AGCAGAGAAGCACGGGTAGT+GGG | + | tig0026659:28222-28241 | None:intergenic | 55.0% |
| ! | AAGCAGAGAAGCACGGGTAG+TGG | + | tig0026659:28223-28242 | None:intergenic | 55.0% |
| !! | CTCCAGTTCTGTGGGTTGGT+AGG | - | tig0026659:28247-28266 | Msa1430450:intron | 55.0% |
| CATCCATACACGGCGAGTCT+CGG | + | tig0026659:28711-28730 | None:intergenic | 55.0% | |
| GCTGCAGATCAGCACAACCT+AGG | + | tig0026659:29046-29065 | None:intergenic | 55.0% | |
| ACCATCAGAAGGCTGAGGAC+AGG | - | tig0026659:29310-29329 | Msa1430450:intron | 55.0% | |
| TCCTGTCCTCAGCCTTCTGA+TGG | + | tig0026659:29314-29333 | None:intergenic | 55.0% | |
| GCGGGTGAAATGTTAGCTGC+AGG | - | tig0026659:29341-29360 | Msa1430450:intron | 55.0% | |
| GGAACTCAGCAGCGGAATAG+TGG | - | tig0026659:29420-29439 | Msa1430450:intron | 55.0% | |
| GCAAAGGAAGGAGCTAGCGT+AGG | - | tig0026659:30054-30073 | Msa1430450:intron | 55.0% | |
| GAGTCCCATCCAAGTCAGAG+GGG | - | tig0026659:30133-30152 | Msa1430450:CDS | 55.0% | |
| !! | AGCACGGGTAGTGGGTGTTC+TGG | + | tig0026659:28214-28233 | None:intergenic | 60.0% |
| GAACCGAGACTCGCCGTGTA+TGG | - | tig0026659:28705-28724 | Msa1430450:intron | 60.0% | |
| GGGTGGGGCTGACAAGCTTA+GGG | - | tig0026659:28946-28965 | Msa1430450:intron | 60.0% | |
| GGTGGGGCTGACAAGCTTAG+GGG | - | tig0026659:28947-28966 | Msa1430450:intron | 60.0% | |
| !! | GTCGCCCCTCTGACTTGGAT+GGG | + | tig0026659:30140-30159 | None:intergenic | 60.0% |
| AAGTCGTCGCCCCTCTGACT+TGG | + | tig0026659:30145-30164 | None:intergenic | 60.0% | |
| GGGGTGGGGCTGACAAGCTT+AGG | - | tig0026659:28945-28964 | Msa1430450:intron | 65.0% | |
| !! | CGTCGCCCCTCTGACTTGGA+TGG | + | tig0026659:30141-30160 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026659 | gene | 27890 | 30682 | 27890 | ID=Msa1430450;Name=Msa1430450 |
| tig0026659 | mRNA | 27890 | 30682 | 27890 | ID=Msa1430450-mRNA-1;Parent=Msa1430450;Name=Msa1430450-mRNA-1;_AED=0.04;_eAED=0.04;_QI=161|1|1|1|1|1|4|163|247 |
| tig0026659 | exon | 27890 | 28247 | 27890 | ID=Msa1430450-mRNA-1:exon:7009;Parent=Msa1430450-mRNA-1 |
| tig0026659 | exon | 28345 | 28517 | 28345 | ID=Msa1430450-mRNA-1:exon:7008;Parent=Msa1430450-mRNA-1 |
| tig0026659 | exon | 30065 | 30154 | 30065 | ID=Msa1430450-mRNA-1:exon:7007;Parent=Msa1430450-mRNA-1 |
| tig0026659 | exon | 30236 | 30682 | 30236 | ID=Msa1430450-mRNA-1:exon:7006;Parent=Msa1430450-mRNA-1 |
| tig0026659 | five_prime_UTR | 30522 | 30682 | 30522 | ID=Msa1430450-mRNA-1:five_prime_utr;Parent=Msa1430450-mRNA-1 |
| tig0026659 | CDS | 30236 | 30521 | 30236 | ID=Msa1430450-mRNA-1:cds;Parent=Msa1430450-mRNA-1 |
| tig0026659 | CDS | 30065 | 30154 | 30065 | ID=Msa1430450-mRNA-1:cds;Parent=Msa1430450-mRNA-1 |
| tig0026659 | CDS | 28345 | 28517 | 28345 | ID=Msa1430450-mRNA-1:cds;Parent=Msa1430450-mRNA-1 |
| tig0026659 | CDS | 28053 | 28247 | 28053 | ID=Msa1430450-mRNA-1:cds;Parent=Msa1430450-mRNA-1 |
| tig0026659 | three_prime_UTR | 27890 | 28052 | 27890 | ID=Msa1430450-mRNA-1:three_prime_utr;Parent=Msa1430450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
