Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706450 | XP_013446935.1 | 94.977 | 219 | 11 | 0 | 1 | 219 | 1 | 219 | 1.34e-147 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706450 | sp|Q67YC9|Y4141_ARATH | 63.842 | 177 | 63 | 1 | 9 | 185 | 8 | 183 | 2.50e-85 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706450 | A0A072TU64 | 94.977 | 219 | 11 | 0 | 1 | 219 | 1 | 219 | 6.41e-148 | 419 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001540 | Msa0706450 | 0.824810 | 6.598454e-54 | -8.615850e-47 |
| Msa0012380 | Msa0706450 | 0.813481 | 2.504322e-51 | -8.615850e-47 |
| Msa0032700 | Msa0706450 | 0.802560 | 5.294543e-49 | -8.615850e-47 |
| Msa0037300 | Msa0706450 | 0.826042 | 3.370200e-54 | -8.615850e-47 |
| Msa0046800 | Msa0706450 | 0.812359 | 4.412042e-51 | -8.615850e-47 |
| Msa0069540 | Msa0706450 | 0.800599 | 1.336331e-48 | -8.615850e-47 |
| Msa0083650 | Msa0706450 | 0.825059 | 5.761857e-54 | -8.615850e-47 |
| Msa0091470 | Msa0706450 | 0.814414 | 1.559575e-51 | -8.615850e-47 |
| Msa0091550 | Msa0706450 | 0.816361 | 5.753515e-52 | -8.615850e-47 |
| Msa0112290 | Msa0706450 | 0.809728 | 1.639696e-50 | -8.615850e-47 |
| Msa0619870 | Msa0706450 | 0.843140 | 1.682693e-58 | -8.615850e-47 |
| Msa0619960 | Msa0706450 | 0.828038 | 1.122526e-54 | -8.615850e-47 |
| Msa0620020 | Msa0706450 | 0.955414 | 3.205732e-113 | -8.615850e-47 |
| Msa0620050 | Msa0706450 | 0.845134 | 4.906792e-59 | -8.615850e-47 |
| Msa0621870 | Msa0706450 | 0.801911 | 7.199846e-49 | -8.615850e-47 |
| Msa0624700 | Msa0706450 | 0.835854 | 1.316929e-56 | -8.615850e-47 |
| Msa0629820 | Msa0706450 | 0.804461 | 2.136270e-49 | -8.615850e-47 |
| Msa0629980 | Msa0706450 | 0.802649 | 5.075295e-49 | -8.615850e-47 |
| Msa0644630 | Msa0706450 | 0.814441 | 1.537911e-51 | -8.615850e-47 |
| Msa0649140 | Msa0706450 | 0.800375 | 1.484543e-48 | -8.615850e-47 |
| Msa0652360 | Msa0706450 | 0.825239 | 5.222908e-54 | -8.615850e-47 |
| Msa0685890 | Msa0706450 | 0.801553 | 8.527533e-49 | -8.615850e-47 |
| Msa0693150 | Msa0706450 | 0.809940 | 1.475724e-50 | -8.615850e-47 |
| Msa0706300 | Msa0706450 | 0.804548 | 2.048705e-49 | -8.615850e-47 |
| Msa0706320 | Msa0706450 | 0.939389 | 1.380276e-99 | -8.615850e-47 |
| Msa0706450 | Msa0706490 | 0.844344 | 8.013643e-59 | -8.615850e-47 |
| Msa0706450 | Msa0732100 | 0.809342 | 1.984138e-50 | -8.615850e-47 |
| Msa0706450 | Msa0748890 | 0.816437 | 5.533783e-52 | -8.615850e-47 |
| Msa0706450 | Msa0749940 | 0.815398 | 9.437765e-52 | -8.615850e-47 |
| Msa0706450 | Msa0752290 | 0.805061 | 1.601105e-49 | -8.615850e-47 |
| Msa0706450 | Msa0773080 | 0.825893 | 3.656706e-54 | -8.615850e-47 |
| Msa0706450 | Msa0790180 | 0.801231 | 9.928721e-49 | -8.615850e-47 |
| Msa0706450 | Msa0796840 | 0.808856 | 2.521486e-50 | -8.615850e-47 |
| Msa0706450 | Msa0806720 | 0.805469 | 1.315354e-49 | -8.615850e-47 |
| Msa0706450 | Msa0806760 | 0.801515 | 8.682657e-49 | -8.615850e-47 |
| Msa0706450 | Msa0810370 | 0.812474 | 4.162858e-51 | -8.615850e-47 |
| Msa0706450 | Msa0823760 | 0.817794 | 2.740440e-52 | -8.615850e-47 |
| Msa0706450 | Msa0832270 | 0.834574 | 2.770311e-56 | -8.615850e-47 |
| Msa0706450 | Msa0833630 | 0.800670 | 1.292797e-48 | -8.615850e-47 |
| Msa0706450 | Msa0841570 | 0.805580 | 1.246315e-49 | -8.615850e-47 |
| Msa0706450 | Msa0862960 | 0.801832 | 7.474358e-49 | -8.615850e-47 |
| Msa0706450 | Msa0866650 | 0.809954 | 1.465439e-50 | -8.615850e-47 |
| Msa0706450 | Msa0879820 | 0.837682 | 4.499273e-57 | -8.615850e-47 |
| Msa0706450 | Msa0893390 | 0.809704 | 1.659184e-50 | -8.615850e-47 |
| Msa0706450 | Msa0909720 | 0.820283 | 7.445273e-53 | -8.615850e-47 |
| Msa0706450 | Msa0944690 | 0.816099 | 6.584513e-52 | -8.615850e-47 |
| Msa0706450 | Msa0967940 | 0.801597 | 8.353276e-49 | -8.615850e-47 |
| Msa0706450 | Msa0969050 | 0.831036 | 2.095416e-55 | -8.615850e-47 |
| Msa0706450 | Msa0970090 | 0.830437 | 2.938715e-55 | -8.615850e-47 |
| Msa0706450 | Msa0973380 | 0.804787 | 1.826972e-49 | -8.615850e-47 |
| Msa0706450 | Msa1013560 | 0.804489 | 2.107456e-49 | -8.615850e-47 |
| Msa0706450 | Msa1033250 | 0.806160 | 9.414028e-50 | -8.615850e-47 |
| Msa0706450 | Msa1034930 | 0.852306 | 5.034871e-61 | -8.615850e-47 |
| Msa0706450 | Msa1067430 | 0.804991 | 1.656122e-49 | -8.615850e-47 |
| Msa0706450 | Msa1072850 | 0.812649 | 3.811886e-51 | -8.615850e-47 |
| Msa0706450 | Msa1074730 | 0.804336 | 2.268722e-49 | -8.615850e-47 |
| Msa0706450 | Msa1074980 | 0.856528 | 3.027250e-62 | -8.615850e-47 |
| Msa0706450 | Msa1080620 | 0.806553 | 7.777186e-50 | -8.615850e-47 |
| Msa0706450 | Msa1080690 | 0.813091 | 3.050157e-51 | -8.615850e-47 |
| Msa0706450 | Msa1110350 | 0.805546 | 1.266958e-49 | -8.615850e-47 |
| Msa0706450 | Msa1113460 | 0.806306 | 8.768032e-50 | -8.615850e-47 |
| Msa0706450 | Msa1121630 | 0.817377 | 3.403100e-52 | -8.615850e-47 |
| Msa0706450 | Msa1126310 | 0.837404 | 5.301988e-57 | -8.615850e-47 |
| Msa0706450 | Msa1128200 | 0.849613 | 2.889346e-60 | -8.615850e-47 |
| Msa0706450 | Msa1129540 | -0.814761 | 1.307040e-51 | -8.615850e-47 |
| Msa0706450 | Msa1132820 | 0.802923 | 4.456134e-49 | -8.615850e-47 |
| Msa0706450 | Msa1137610 | 0.821217 | 4.539503e-53 | -8.615850e-47 |
| Msa0706450 | Msa1149960 | 0.823732 | 1.181936e-53 | -8.615850e-47 |
| Msa0706450 | Msa1154020 | 0.808338 | 3.252401e-50 | -8.615850e-47 |
| Msa0706450 | Msa1156210 | 0.803017 | 4.261015e-49 | -8.615850e-47 |
| Msa0706450 | Msa1161060 | 0.808620 | 2.832069e-50 | -8.615850e-47 |
| Msa0706450 | Msa1162330 | 0.804859 | 1.764210e-49 | -8.615850e-47 |
| Msa0706450 | Msa1167160 | 0.837179 | 6.055907e-57 | -8.615850e-47 |
| Msa0706450 | Msa1177960 | 0.826415 | 2.746574e-54 | -8.615850e-47 |
| Msa0706450 | Msa1181020 | 0.800055 | 1.724366e-48 | -8.615850e-47 |
| Msa0706450 | Msa1181510 | 0.805821 | 1.109528e-49 | -8.615850e-47 |
| Msa0706450 | Msa1202170 | 0.819656 | 1.035803e-52 | -8.615850e-47 |
| Msa0706450 | Msa1206500 | 0.819987 | 8.701064e-53 | -8.615850e-47 |
| Msa0706450 | Msa1208630 | 0.826014 | 3.422536e-54 | -8.615850e-47 |
| Msa0706450 | Msa1208750 | 0.809217 | 2.109897e-50 | -8.615850e-47 |
| Msa0706450 | Msa1214080 | 0.834448 | 2.979592e-56 | -8.615850e-47 |
| Msa0706450 | Msa1237750 | 0.812405 | 4.311481e-51 | -8.615850e-47 |
| Msa0706450 | Msa1239900 | 0.818262 | 2.148210e-52 | -8.615850e-47 |
| Msa0706450 | Msa1244380 | 0.805093 | 1.576717e-49 | -8.615850e-47 |
| Msa0706450 | Msa1250500 | 0.861277 | 1.148747e-63 | -8.615850e-47 |
| Msa0706450 | Msa1264670 | 0.818539 | 1.859772e-52 | -8.615850e-47 |
| Msa0706450 | Msa1267560 | 0.840385 | 8.975824e-58 | -8.615850e-47 |
| Msa0706450 | Msa1272200 | 0.802453 | 5.570521e-49 | -8.615850e-47 |
| Msa0706450 | Msa1279700 | 0.815384 | 9.503637e-52 | -8.615850e-47 |
| Msa0706450 | Msa1281270 | 0.812445 | 4.224294e-51 | -8.615850e-47 |
| Msa0706450 | Msa1286850 | -0.815524 | 8.847988e-52 | -8.615850e-47 |
| Msa0706450 | Msa1293060 | 0.806939 | 6.446953e-50 | -8.615850e-47 |
| Msa0706450 | Msa1294940 | 0.807293 | 5.425350e-50 | -8.615850e-47 |
| Msa0706450 | Msa1297500 | 0.858002 | 1.110588e-62 | -8.615850e-47 |
| Msa0706450 | Msa1297560 | 0.847265 | 1.289817e-59 | -8.615850e-47 |
| Msa0706450 | Msa1298180 | 0.833640 | 4.749587e-56 | -8.615850e-47 |
| Msa0706450 | Msa1305650 | 0.805865 | 1.086062e-49 | -8.615850e-47 |
| Msa0706450 | Msa1318180 | 0.825565 | 4.374592e-54 | -8.615850e-47 |
| Msa0706450 | Msa1320380 | 0.814287 | 1.663867e-51 | -8.615850e-47 |
| Msa0706450 | Msa1349170 | 0.810356 | 1.200335e-50 | -8.615850e-47 |
| Msa0706450 | Msa1349720 | 0.803424 | 3.508652e-49 | -8.615850e-47 |
| Msa0706450 | Msa1372680 | 0.812875 | 3.401938e-51 | -8.615850e-47 |
| Msa0706450 | Msa1375600 | 0.826827 | 2.190579e-54 | -8.615850e-47 |
| Msa0706450 | Msa1376560 | 0.831924 | 1.266638e-55 | -8.615850e-47 |
| Msa0706450 | Msa1388610 | 0.811663 | 6.255112e-51 | -8.615850e-47 |
| Msa0706450 | Msa1395390 | -0.807984 | 3.868937e-50 | -8.615850e-47 |
| Msa0706450 | Msa1398840 | 0.801733 | 7.835026e-49 | -8.615850e-47 |
| Msa0706450 | Msa1400830 | 0.832694 | 8.168574e-56 | -8.615850e-47 |
| Msa0706450 | Msa1404690 | 0.802753 | 4.831401e-49 | -8.615850e-47 |
| Msa0706450 | Msa1410360 | 0.803071 | 4.151807e-49 | -8.615850e-47 |
| Msa0706450 | Msa1411390 | 0.827688 | 1.362458e-54 | -8.615850e-47 |
| Msa0706450 | Msa1411690 | 0.804109 | 2.529159e-49 | -8.615850e-47 |
| Msa0706450 | Msa1415250 | 0.811205 | 7.865926e-51 | -8.615850e-47 |
| Msa0706450 | Msa1422900 | 0.805773 | 1.135462e-49 | -8.615850e-47 |
| Msa0706450 | Msa1426880 | 0.862521 | 4.777446e-64 | -8.615850e-47 |
| Msa0706450 | Msa1430450 | 0.802873 | 4.563668e-49 | -8.615850e-47 |
| Msa0706450 | Msa1439880 | 0.826046 | 3.363238e-54 | -8.615850e-47 |
| Msa0706450 | Msa1442030 | 0.800137 | 1.659726e-48 | -8.615850e-47 |
| Msa0706450 | Msa1455120 | 0.801394 | 9.193689e-49 | -8.615850e-47 |
| Msa0706450 | Msa1455560 | 0.858299 | 9.061432e-63 | -8.615850e-47 |
| Msa0706450 | Msa1456390 | 0.834784 | 2.452633e-56 | -8.615850e-47 |
| Msa0140290 | Msa0706450 | 0.801159 | 1.026726e-48 | -8.615850e-47 |
| Msa0151790 | Msa0706450 | 0.815524 | 8.847988e-52 | -8.615850e-47 |
| Msa0155550 | Msa0706450 | 0.804073 | 2.573795e-49 | -8.615850e-47 |
| Msa0164540 | Msa0706450 | 0.803157 | 3.986327e-49 | -8.615850e-47 |
| Msa0171920 | Msa0706450 | 0.813832 | 2.096462e-51 | -8.615850e-47 |
| Msa0175280 | Msa0706450 | 0.805459 | 1.321098e-49 | -8.615850e-47 |
| Msa0178020 | Msa0706450 | 0.827523 | 1.492570e-54 | -8.615850e-47 |
| Msa0198890 | Msa0706450 | 0.802331 | 5.901622e-49 | -8.615850e-47 |
| Msa0199740 | Msa0706450 | 0.803477 | 3.422457e-49 | -8.615850e-47 |
| Msa0216390 | Msa0706450 | 0.856971 | 2.242171e-62 | -8.615850e-47 |
| Msa0217300 | Msa0706450 | 0.801625 | 8.241521e-49 | -8.615850e-47 |
| Msa0233200 | Msa0706450 | 0.808342 | 3.246373e-50 | -8.615850e-47 |
| Msa0234930 | Msa0706450 | 0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0235180 | Msa0706450 | 0.801887 | 7.281801e-49 | -8.615850e-47 |
| Msa0365110 | Msa0706450 | 0.805359 | 1.386853e-49 | -8.615850e-47 |
| Msa0367370 | Msa0706450 | 0.820256 | 7.550822e-53 | -8.615850e-47 |
| Msa0368430 | Msa0706450 | 0.808678 | 2.752786e-50 | -8.615850e-47 |
| Msa0373220 | Msa0706450 | 0.811627 | 6.368400e-51 | -8.615850e-47 |
| Msa0376760 | Msa0706450 | 0.813260 | 2.800167e-51 | -8.615850e-47 |
| Msa0379390 | Msa0706450 | 0.808286 | 3.336785e-50 | -8.615850e-47 |
| Msa0379450 | Msa0706450 | 0.846749 | 1.785881e-59 | -8.615850e-47 |
| Msa0380440 | Msa0706450 | 0.811189 | 7.930503e-51 | -8.615850e-47 |
| Msa0380650 | Msa0706450 | 0.812587 | 3.934173e-51 | -8.615850e-47 |
| Msa0383110 | Msa0706450 | 0.825107 | 5.614120e-54 | -8.615850e-47 |
| Msa0392540 | Msa0706450 | 0.826999 | 1.992678e-54 | -8.615850e-47 |
| Msa0393880 | Msa0706450 | 0.830922 | 2.234841e-55 | -8.615850e-47 |
| Msa0400060 | Msa0706450 | -0.824491 | 7.843493e-54 | -8.615850e-47 |
| Msa0412470 | Msa0706450 | 0.839695 | 1.358556e-57 | -8.615850e-47 |
| Msa0415860 | Msa0706450 | 0.827947 | 1.180496e-54 | -8.615850e-47 |
| Msa0423820 | Msa0706450 | 0.806746 | 7.080855e-50 | -8.615850e-47 |
| Msa0430290 | Msa0706450 | 0.818459 | 1.938415e-52 | -8.615850e-47 |
| Msa0440310 | Msa0706450 | 0.811978 | 5.343078e-51 | -8.615850e-47 |
| Msa0441670 | Msa0706450 | 0.825884 | 3.674099e-54 | -8.615850e-47 |
| Msa0444340 | Msa0706450 | 0.801726 | 7.857699e-49 | -8.615850e-47 |
| Msa0463980 | Msa0706450 | 0.804578 | 2.020095e-49 | -8.615850e-47 |
| Msa0468020 | Msa0706450 | 0.810719 | 1.002189e-50 | -8.615850e-47 |
| Msa0471700 | Msa0706450 | 0.812771 | 3.585210e-51 | -8.615850e-47 |
| Msa0473010 | Msa0706450 | 0.802609 | 5.172481e-49 | -8.615850e-47 |
| Msa0475130 | Msa0706450 | 0.842211 | 2.969111e-58 | -8.615850e-47 |
| Msa0480150 | Msa0706450 | 0.800522 | 1.385523e-48 | -8.615850e-47 |
| Msa0480430 | Msa0706450 | 0.822522 | 2.264249e-53 | -8.615850e-47 |
| Msa0481490 | Msa0706450 | 0.816253 | 6.082522e-52 | -8.615850e-47 |
| Msa0247310 | Msa0706450 | 0.811299 | 7.506502e-51 | -8.615850e-47 |
| Msa0255770 | Msa0706450 | 0.815688 | 8.131140e-52 | -8.615850e-47 |
| Msa0256590 | Msa0706450 | 0.848366 | 6.415028e-60 | -8.615850e-47 |
| Msa0258410 | Msa0706450 | 0.818389 | 2.011072e-52 | -8.615850e-47 |
| Msa0266100 | Msa0706450 | 0.812201 | 4.776590e-51 | -8.615850e-47 |
| Msa0274870 | Msa0706450 | 0.803353 | 3.630873e-49 | -8.615850e-47 |
| Msa0280120 | Msa0706450 | 0.811993 | 5.300889e-51 | -8.615850e-47 |
| Msa0288350 | Msa0706450 | 0.808440 | 3.094275e-50 | -8.615850e-47 |
| Msa0288360 | Msa0706450 | 0.806102 | 9.682341e-50 | -8.615850e-47 |
| Msa0295730 | Msa0706450 | 0.856835 | 2.458910e-62 | -8.615850e-47 |
| Msa0296490 | Msa0706450 | 0.805968 | 1.033100e-49 | -8.615850e-47 |
| Msa0306160 | Msa0706450 | 0.819342 | 1.221263e-52 | -8.615850e-47 |
| Msa0313800 | Msa0706450 | 0.814351 | 1.610377e-51 | -8.615850e-47 |
| Msa0334280 | Msa0706450 | 0.847355 | 1.218667e-59 | -8.615850e-47 |
| Msa0335740 | Msa0706450 | 0.825787 | 3.874757e-54 | -8.615850e-47 |
| Msa0347060 | Msa0706450 | 0.818053 | 2.395118e-52 | -8.615850e-47 |
| Msa0347280 | Msa0706450 | 0.831828 | 1.337547e-55 | -8.615850e-47 |
| Msa0485350 | Msa0706450 | 0.803226 | 3.857531e-49 | -8.615850e-47 |
| Msa0486200 | Msa0706450 | 0.818362 | 2.039007e-52 | -8.615850e-47 |
| Msa0489330 | Msa0706450 | 0.833760 | 4.432145e-56 | -8.615850e-47 |
| Msa0503220 | Msa0706450 | -0.814296 | 1.656432e-51 | -8.615850e-47 |
| Msa0506740 | Msa0706450 | 0.807669 | 4.515017e-50 | -8.615850e-47 |
| Msa0510540 | Msa0706450 | 0.807162 | 5.783999e-50 | -8.615850e-47 |
| Msa0515730 | Msa0706450 | 0.835272 | 1.848275e-56 | -8.615850e-47 |
| Msa0524570 | Msa0706450 | 0.823667 | 1.224210e-53 | -8.615850e-47 |
| Msa0524960 | Msa0706450 | 0.817320 | 3.506418e-52 | -8.615850e-47 |
| Msa0575670 | Msa0706450 | 0.828750 | 7.556613e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706450 | MtrunA17_Chr8g0385631 | 94.977 | 219 | 11 | 0 | 1 | 219 | 1 | 219 | 1.23e-151 | 419 |
| Msa0706450 | MtrunA17_Chr8g0385601 | 80.180 | 222 | 42 | 1 | 1 | 220 | 1 | 222 | 2.10e-133 | 374 |
| Msa0706450 | MtrunA17_Chr3g0131541 | 67.553 | 188 | 54 | 3 | 1 | 185 | 1 | 184 | 5.45e-91 | 266 |
| Msa0706450 | MtrunA17_Chr3g0131551 | 63.492 | 189 | 66 | 2 | 1 | 186 | 7 | 195 | 5.91e-84 | 248 |
| Msa0706450 | MtrunA17_Chr8g0385611 | 75.796 | 157 | 38 | 0 | 1 | 157 | 1 | 157 | 1.10e-81 | 240 |
| Msa0706450 | MtrunA17_Chr8g0385621 | 75.000 | 56 | 11 | 2 | 158 | 211 | 1 | 55 | 5.47e-21 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706450 | AT3G23760.1 | 68.452 | 168 | 52 | 1 | 22 | 189 | 26 | 192 | 1.83e-87 | 256 |
| Msa0706450 | AT4G14100.1 | 63.842 | 177 | 63 | 1 | 9 | 185 | 8 | 183 | 2.55e-86 | 254 |
Find 64 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGATGGTGCTAACTATT+TGG | 0.188411 | 4_4:-79417100 | Msa0706450:CDS |
| AGAGGCCATATTGCTGATTT+TGG | 0.196998 | 4_4:+79417449 | None:intergenic |
| TCCGGCCACGGCGTTGGAAT+TGG | 0.214822 | 4_4:+79417351 | None:intergenic |
| CTTCGTCCCAATTGGCTTGA+TGG | 0.251154 | 4_4:-79417114 | Msa0706450:CDS |
| CTTGATGGTGCTAACTATTT+GGG | 0.286568 | 4_4:-79417099 | Msa0706450:CDS |
| AATGTTGAAGTTGCGTCCTT+TGG | 0.308667 | 4_4:+79417257 | None:intergenic |
| AGCAGCTTCTAAATCTAATA+AGG | 0.316448 | 4_4:+79415493 | None:intergenic |
| TGAGAACACCAAGCTGATAT+TGG | 0.332979 | 4_4:+79417232 | None:intergenic |
| CCGGCCACGGCGTTGGAATT+GGG | 0.346904 | 4_4:+79417352 | None:intergenic |
| TCCTTCCAAAATCAGCAATA+TGG | 0.368121 | 4_4:-79417454 | Msa0706450:exon |
| TGCCGCTTCTGTTTATGAAT+AGG | 0.369449 | 4_4:+79417313 | None:intergenic |
| TATAAACCGTACGCTATTGC+TGG | 0.386737 | 4_4:+79415420 | None:intergenic |
| TGGGTATTCTTCGTCCCAAT+TGG | 0.401532 | 4_4:-79417122 | Msa0706450:CDS |
| TTCTCAAATACGACCTTGAA+TGG | 0.403268 | 4_4:-79417215 | Msa0706450:CDS |
| ATGTTGAAGTTGCGTCCTTT+GGG | 0.414721 | 4_4:+79417258 | None:intergenic |
| GTTAGCACCATCAAGCCAAT+TGG | 0.414933 | 4_4:+79417107 | None:intergenic |
| GAGTAGAAGATCCACTTAAC+AGG | 0.446273 | 4_4:+79416991 | None:intergenic |
| AGGACTGAATGAAACTGTTC+CGG | 0.452659 | 4_4:+79417333 | None:intergenic |
| AGGTGCCATTGTTCCATTCA+AGG | 0.452905 | 4_4:+79417202 | None:intergenic |
| CCCAATTCCAACGCCGTGGC+CGG | 0.458323 | 4_4:-79417352 | Msa0706450:CDS |
| AACTGTTCCGGCCACGGCGT+TGG | 0.477557 | 4_4:+79417345 | None:intergenic |
| AACCAAAGATACAGAAAAGA+AGG | 0.480532 | 4_4:-79415523 | Msa0706450:CDS |
| ATTTGAGGTTGGTGCAGTGC+TGG | 0.481969 | 4_4:-79415597 | Msa0706450:CDS |
| ATGTTGAGAGATGGAAGAAG+AGG | 0.484687 | 4_4:+79417388 | None:intergenic |
| TCTCAAGACCACAGAGTAGT+AGG | 0.485162 | 4_4:+79413459 | None:intergenic |
| TTTGTCACAGCTAGTGCATA+GGG | 0.487513 | 4_4:-79413424 | Msa0706450:three_prime_UTR |
| TTAGAAGCTGCTGTTGGTGG+TGG | 0.492112 | 4_4:-79415482 | Msa0706450:CDS |
| TCACTAAAAGACCTGTTAAG+TGG | 0.510005 | 4_4:-79417002 | Msa0706450:CDS |
| TAGCTGTTGGAAGTTAAGGC+AGG | 0.514518 | 4_4:-79413514 | Msa0706450:three_prime_UTR |
| TTAGCACCATCAAGCCAATT+GGG | 0.514645 | 4_4:+79417108 | None:intergenic |
| AAACCGACCTATGGTACGAT+TGG | 0.517325 | 4_4:-79417281 | Msa0706450:CDS |
| TGCTCATGTGATGACATTTG+AGG | 0.519002 | 4_4:-79415612 | Msa0706450:CDS |
| AACATTATCCAATATCAGCT+TGG | 0.519327 | 4_4:-79417240 | Msa0706450:CDS |
| GATTTAGAAGCTGCTGTTGG+TGG | 0.522659 | 4_4:-79415485 | Msa0706450:CDS |
| GAATGAAACTGTTCCGGCCA+CGG | 0.527864 | 4_4:+79417339 | None:intergenic |
| GGAATAAAATTAAACTCTGA+TGG | 0.530319 | 4_4:-79413493 | Msa0706450:three_prime_UTR |
| GTTAAGTGGATCTTCTACTC+CGG | 0.536632 | 4_4:-79416988 | Msa0706450:intron |
| CTATGGTACGATTGGCCCAA+AGG | 0.539339 | 4_4:-79417273 | Msa0706450:CDS |
| GTGGATAAGAAGATATCATA+CGG | 0.544515 | 4_4:+79417515 | None:intergenic |
| CTTTGGGCCAATCGTACCAT+AGG | 0.551684 | 4_4:+79417274 | None:intergenic |
| AGGGTCGAGAGTATAGAGAA+AGG | 0.556535 | 4_4:+79417179 | None:intergenic |
| GCTGGACGATGAGCATTGGC+AGG | 0.560605 | 4_4:-79415579 | Msa0706450:CDS |
| AATACGTTCTTCTGTGGCAG+AGG | 0.569209 | 4_4:+79417431 | None:intergenic |
| TTAGATTTAGAAGCTGCTGT+TGG | 0.576944 | 4_4:-79415488 | Msa0706450:CDS |
| CACTGACACATAATAAGAGA+TGG | 0.579462 | 4_4:+79413352 | None:intergenic |
| CATGTGATGACATTTGAGGT+TGG | 0.580197 | 4_4:-79415608 | Msa0706450:CDS |
| ATAAACCGTACGCTATTGCT+GGG | 0.589811 | 4_4:+79415421 | None:intergenic |
| GGGCCAATCGTACCATAGGT+CGG | 0.598624 | 4_4:+79417278 | None:intergenic |
| GGAAGGATGAGAATTGGGAA+TGG | 0.600125 | 4_4:+79417470 | None:intergenic |
| GTCCTATTCATAAACAGAAG+CGG | 0.600560 | 4_4:-79417315 | Msa0706450:CDS |
| GCCTCACTAAAACAATAGAC+AGG | 0.605065 | 4_4:+79415554 | None:intergenic |
| AGCCACCCAGCAATAGCGTA+CGG | 0.609015 | 4_4:-79415426 | Msa0706450:three_prime_UTR |
| TACGACCTTGAATGGAACAA+TGG | 0.609959 | 4_4:-79417207 | Msa0706450:CDS |
| CAGTGCTGGACGATGAGCAT+TGG | 0.613309 | 4_4:-79415583 | Msa0706450:CDS |
| CAAACAAATACGTTCTTCTG+TGG | 0.631984 | 4_4:+79417425 | None:intergenic |
| GCGTACGGTTTATAATTGTG+AGG | 0.634966 | 4_4:-79415411 | Msa0706450:intron |
| TGACACATAATAAGAGATGG+AGG | 0.643361 | 4_4:+79413355 | None:intergenic |
| TGGATAAGAAGATATCATAC+GGG | 0.645492 | 4_4:+79417516 | None:intergenic |
| AACCGTACGCTATTGCTGGG+TGG | 0.669802 | 4_4:+79415424 | None:intergenic |
| GACACATAATAAGAGATGGA+GGG | 0.670822 | 4_4:+79413356 | None:intergenic |
| ACGACCCAATTCCAACGCCG+TGG | 0.671513 | 4_4:-79417356 | Msa0706450:CDS |
| GTCGAGAGTATAGAGAAAGG+AGG | 0.699354 | 4_4:+79417182 | None:intergenic |
| CAGTATCACTGTGAACAACG+TGG | 0.710837 | 4_4:+79417496 | None:intergenic |
| ACACTCAGCCTACTACTCTG+TGG | 0.725490 | 4_4:-79413467 | Msa0706450:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATAAAAAATTGAAC+AGG | - | chr4_4:79414399-79414418 | Msa0706450:intron | 10.0% |
| !!! | TATTGTTAAATAAATGATTT+TGG | + | chr4_4:79417187-79417206 | None:intergenic | 10.0% |
| !!! | AAAGTAATTTTCTTTTATAA+TGG | + | chr4_4:79417526-79417545 | None:intergenic | 10.0% |
| !! | AAAAACAAAACATAAAACAA+GGG | + | chr4_4:79416588-79416607 | None:intergenic | 15.0% |
| !! | AAAAAACAAAACATAAAACA+AGG | + | chr4_4:79416589-79416608 | None:intergenic | 15.0% |
| !! | TTGATTTAAGTATGTATTTA+TGG | - | chr4_4:79416624-79416643 | Msa0706450:intron | 15.0% |
| !! | ACACTACAATTTATAAAATA+TGG | + | chr4_4:79417234-79417253 | None:intergenic | 15.0% |
| !!! | ATACTTTTCTTTGTAATGTT+TGG | - | chr4_4:79413733-79413752 | Msa0706450:intron | 20.0% |
| !!! | TACTTTTCTTTGTAATGTTT+GGG | - | chr4_4:79413734-79413753 | Msa0706450:intron | 20.0% |
| !!! | TGATTTTATTTGGTATTATG+AGG | - | chr4_4:79413764-79413783 | Msa0706450:intron | 20.0% |
| !!! | ATAAAAGCATAATAACTAAC+CGG | + | chr4_4:79413829-79413848 | None:intergenic | 20.0% |
| !!! | AACCATTTTCAACATATATT+TGG | - | chr4_4:79414197-79414216 | Msa0706450:intron | 20.0% |
| !! | AACCAAATATATGTTGAAAA+TGG | + | chr4_4:79414202-79414221 | None:intergenic | 20.0% |
| !!! | TTTTTCTTCATTCTTTTTCT+TGG | - | chr4_4:79414224-79414243 | Msa0706450:intron | 20.0% |
| !! | TGATTGATAAATTGTTAAGT+TGG | + | chr4_4:79414436-79414455 | None:intergenic | 20.0% |
| !! | ATCAAGATTTAATAGAATGT+TGG | + | chr4_4:79414567-79414586 | None:intergenic | 20.0% |
| !!! | AAGTTCTGAAATTTCAAATT+GGG | - | chr4_4:79414691-79414710 | Msa0706450:intron | 20.0% |
| !!! | TATATGTACTTTGTTTTGTT+GGG | - | chr4_4:79415438-79415457 | Msa0706450:exon | 20.0% |
| !!! | TCTTAATAAAAGCTTTGTTT+TGG | - | chr4_4:79415482-79415501 | Msa0706450:CDS | 20.0% |
| !!! | CTTAATAAAAGCTTTGTTTT+GGG | - | chr4_4:79415483-79415502 | Msa0706450:CDS | 20.0% |
| !! | TTCATTGTTAACTCATTTAT+TGG | - | chr4_4:79416336-79416355 | Msa0706450:intron | 20.0% |
| !!! | ATGGATATAATTTAAGATTG+TGG | - | chr4_4:79416807-79416826 | Msa0706450:intron | 20.0% |
| !! | TTTTGCAAGTGTGATTAAAA+GGG | + | chr4_4:79413638-79413657 | None:intergenic | 25.0% |
| !! | TTTTTGCAAGTGTGATTAAA+AGG | + | chr4_4:79413639-79413658 | None:intergenic | 25.0% |
| !!! | AAAAAGCTTCATTTTGATGT+GGG | - | chr4_4:79413654-79413673 | Msa0706450:intron | 25.0% |
| ! | TGCTTCATAGTAAATTAACA+TGG | + | chr4_4:79413868-79413887 | None:intergenic | 25.0% |
| ! | TTCAATTAGGGTTATGAAAT+TGG | - | chr4_4:79413930-79413949 | Msa0706450:intron | 25.0% |
| ! | TCAATTAGGGTTATGAAATT+GGG | - | chr4_4:79413931-79413950 | Msa0706450:intron | 25.0% |
| !!! | GAAGTTCTGAAATTTCAAAT+TGG | - | chr4_4:79414690-79414709 | Msa0706450:intron | 25.0% |
| !!! | AGTTCTGAAATTTCAAATTG+GGG | - | chr4_4:79414692-79414711 | Msa0706450:intron | 25.0% |
| ! | GAGTTTACGATTATCAAATT+GGG | - | chr4_4:79414722-79414741 | Msa0706450:intron | 25.0% |
| ! | AGTTTACGATTATCAAATTG+GGG | - | chr4_4:79414723-79414742 | Msa0706450:intron | 25.0% |
| ! | GAAACGATTCAAAAACTAAA+AGG | - | chr4_4:79414872-79414891 | Msa0706450:intron | 25.0% |
| ! | TGAAACTTAAAGGATGAATT+TGG | - | chr4_4:79414911-79414930 | Msa0706450:intron | 25.0% |
| ! | GAAACTTAAAGGATGAATTT+GGG | - | chr4_4:79414912-79414931 | Msa0706450:intron | 25.0% |
| ! | GGGAAAAACTAAAAACTTAA+AGG | - | chr4_4:79414932-79414951 | Msa0706450:intron | 25.0% |
| ! | ACCTAAAAAAAACTATGTGT+TGG | - | chr4_4:79414972-79414991 | Msa0706450:intron | 25.0% |
| !!! | ACCAACACATAGTTTTTTTT+AGG | + | chr4_4:79414976-79414995 | None:intergenic | 25.0% |
| !!! | CTATATGTACTTTGTTTTGT+TGG | - | chr4_4:79415437-79415456 | Msa0706450:exon | 25.0% |
| !!! | CTTAATAGAAGCTTTGTTTT+TGG | - | chr4_4:79415554-79415573 | Msa0706450:CDS | 25.0% |
| ! | AGACATAAAACATGCATATT+TGG | + | chr4_4:79415590-79415609 | None:intergenic | 25.0% |
| ! | ATCTTCTAATAGAATCTTGT+TGG | - | chr4_4:79415618-79415637 | Msa0706450:CDS | 25.0% |
| !! | ATTAAATGAGACGTGTTTTT+GGG | + | chr4_4:79415931-79415950 | None:intergenic | 25.0% |
| !! | AATTAAATGAGACGTGTTTT+TGG | + | chr4_4:79415932-79415951 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTGTGTCCATTTT+TGG | - | chr4_4:79416012-79416031 | Msa0706450:intron | 25.0% |
| ! | GAGATCAATGCATAAATATT+TGG | + | chr4_4:79416171-79416190 | None:intergenic | 25.0% |
| !!! | TTTGTGTTGCTCATTTTTTT+TGG | - | chr4_4:79416914-79416933 | Msa0706450:intron | 25.0% |
| ! | CACAGTTTATTCTAGTAATT+TGG | - | chr4_4:79416971-79416990 | Msa0706450:intron | 25.0% |
| ! | ATTCTAGTAATTTGGTTGTA+CGG | - | chr4_4:79416979-79416998 | Msa0706450:intron | 25.0% |
| ! | TTGTCTGTGATATCAATATT+TGG | - | chr4_4:79417146-79417165 | Msa0706450:CDS | 25.0% |
| !!! | GTGATATCAATATTTGGTTT+TGG | - | chr4_4:79417152-79417171 | Msa0706450:CDS | 25.0% |
| ! | AAATTGTAGTGTTTATTGCA+TGG | - | chr4_4:79417242-79417261 | Msa0706450:CDS | 25.0% |
| ! | GGAATAAAATTAAACTCTGA+TGG | - | chr4_4:79417302-79417321 | Msa0706450:CDS | 25.0% |
| TGGATAAGAAGATATCATAC+GGG | + | chr4_4:79413282-79413301 | None:intergenic | 30.0% | |
| GTGGATAAGAAGATATCATA+CGG | + | chr4_4:79413283-79413302 | None:intergenic | 30.0% | |
| !! | ATTTTGGAAGGATGAGAATT+GGG | + | chr4_4:79413333-79413352 | None:intergenic | 30.0% |
| AACATTATCCAATATCAGCT+TGG | - | chr4_4:79413555-79413574 | Msa0706450:intron | 30.0% | |
| !! | CAAAAAGCTTCATTTTGATG+TGG | - | chr4_4:79413653-79413672 | Msa0706450:intron | 30.0% |
| !! | GGGAGAAAGTTGATTTTATT+TGG | - | chr4_4:79413754-79413773 | Msa0706450:intron | 30.0% |
| TAACATGGTACATCAGTTAA+AGG | + | chr4_4:79413853-79413872 | None:intergenic | 30.0% | |
| CAATTAGGGTTATGAAATTG+GGG | - | chr4_4:79413932-79413951 | Msa0706450:intron | 30.0% | |
| AATTAGGGTTATGAAATTGG+GGG | - | chr4_4:79413933-79413952 | Msa0706450:intron | 30.0% | |
| TGATGTAATGTGTTGAATTG+TGG | + | chr4_4:79414039-79414058 | None:intergenic | 30.0% | |
| ATTTGTGTCATCACTACAAT+AGG | + | chr4_4:79414150-79414169 | None:intergenic | 30.0% | |
| TGGTAATAATGAGCATTACA+AGG | + | chr4_4:79414257-79414276 | None:intergenic | 30.0% | |
| ATTCTCGTAACAAAGTAGAT+GGG | + | chr4_4:79414630-79414649 | None:intergenic | 30.0% | |
| AATTCTCGTAACAAAGTAGA+TGG | + | chr4_4:79414631-79414650 | None:intergenic | 30.0% | |
| ATCTACTTTGTTACGAGAAT+TGG | - | chr4_4:79414630-79414649 | Msa0706450:intron | 30.0% | |
| AATTTCAAATTGGGGAACAA+TGG | - | chr4_4:79414700-79414719 | Msa0706450:intron | 30.0% | |
| GGAGTTTACGATTATCAAAT+TGG | - | chr4_4:79414721-79414740 | Msa0706450:intron | 30.0% | |
| TTATCAAATTGGGGAACAAA+TGG | - | chr4_4:79414732-79414751 | Msa0706450:intron | 30.0% | |
| TATCAAATTGGGGAACAAAT+GGG | - | chr4_4:79414733-79414752 | Msa0706450:intron | 30.0% | |
| AAAAACTAAAAGGACCTCTT+TGG | - | chr4_4:79414882-79414901 | Msa0706450:intron | 30.0% | |
| AAAACTAAAAGGACCTCTTT+GGG | - | chr4_4:79414883-79414902 | Msa0706450:intron | 30.0% | |
| !!! | TTGGGACTTTTGAAACTTAA+AGG | - | chr4_4:79414901-79414920 | Msa0706450:intron | 30.0% |
| TTTAGGTCAAATGCATCATT+AGG | + | chr4_4:79414959-79414978 | None:intergenic | 30.0% | |
| !! | TTAGTTGTGTTGATAGTGAT+TGG | - | chr4_4:79415116-79415135 | Msa0706450:intron | 30.0% |
| AAGCCTGATATATGATATGA+TGG | - | chr4_4:79415140-79415159 | Msa0706450:intron | 30.0% | |
| CAACCATCATATCATATATC+AGG | + | chr4_4:79415146-79415165 | None:intergenic | 30.0% | |
| CTGATATATGATATGATGGT+TGG | - | chr4_4:79415144-79415163 | Msa0706450:intron | 30.0% | |
| AACCAAAGATACAGAAAAGA+AGG | - | chr4_4:79415272-79415291 | Msa0706450:intron | 30.0% | |
| AGCAGCTTCTAAATCTAATA+AGG | + | chr4_4:79415305-79415324 | None:intergenic | 30.0% | |
| !!! | TGCAATGTACTTTGTTTTGT+TGG | - | chr4_4:79415508-79415527 | Msa0706450:CDS | 30.0% |
| !!! | GCAATGTACTTTGTTTTGTT+GGG | - | chr4_4:79415509-79415528 | Msa0706450:CDS | 30.0% |
| ACAAGACTCCAATTATAATG+CGG | + | chr4_4:79415647-79415666 | None:intergenic | 30.0% | |
| ! | CATTATAATTGGAGTCTTGT+TGG | - | chr4_4:79415647-79415666 | Msa0706450:intron | 30.0% |
| TTTCTTGCTTATAAAGCTTG+AGG | - | chr4_4:79415694-79415713 | Msa0706450:intron | 30.0% | |
| TTCTTGCTTATAAAGCTTGA+GGG | - | chr4_4:79415695-79415714 | Msa0706450:intron | 30.0% | |
| !! | TTAAATGAGACGTGTTTTTG+GGG | + | chr4_4:79415930-79415949 | None:intergenic | 30.0% |
| ACTTAAAGTTGAAACATGCT+TGG | + | chr4_4:79415993-79416012 | None:intergenic | 30.0% | |
| !!! | TTTTCCTACTGATTTCTACA+AGG | + | chr4_4:79416055-79416074 | None:intergenic | 30.0% |
| CATTAACTGCTATGATAGAA+TGG | - | chr4_4:79416088-79416107 | Msa0706450:intron | 30.0% | |
| CTATTTGCAATCATCTATTG+CGG | + | chr4_4:79416146-79416165 | None:intergenic | 30.0% | |
| ! | TCAAATTAAATCCCTTTTGG+CGG | + | chr4_4:79416664-79416683 | None:intergenic | 30.0% |
| ! | CCATCAAATTAAATCCCTTT+TGG | + | chr4_4:79416667-79416686 | None:intergenic | 30.0% |
| !! | CCAAAAGGGATTTAATTTGA+TGG | - | chr4_4:79416664-79416683 | Msa0706450:intron | 30.0% |
| AGCTAAAGATAAATAGCTTC+CGG | - | chr4_4:79416706-79416725 | Msa0706450:intron | 30.0% | |
| ATCATATGTTTGGATTCTAC+GGG | + | chr4_4:79416781-79416800 | None:intergenic | 30.0% | |
| GATCATATGTTTGGATTCTA+CGG | + | chr4_4:79416782-79416801 | None:intergenic | 30.0% | |
| CCATTTACTGATCATATGTT+TGG | + | chr4_4:79416791-79416810 | None:intergenic | 30.0% | |
| CCAAACATATGATCAGTAAA+TGG | - | chr4_4:79416788-79416807 | Msa0706450:intron | 30.0% | |
| ATTCTTCTACGTATGACAAA+GGG | + | chr4_4:79416844-79416863 | None:intergenic | 30.0% | |
| AATTCTTCTACGTATGACAA+AGG | + | chr4_4:79416845-79416864 | None:intergenic | 30.0% | |
| !!! | TTGCTCATTTTTTTTGGCTT+AGG | - | chr4_4:79416920-79416939 | Msa0706450:intron | 30.0% |
| !!! | TGCTCATTTTTTTTGGCTTA+GGG | - | chr4_4:79416921-79416940 | Msa0706450:intron | 30.0% |
| ! | GCTATGTAAAAGGCTTTTAA+GGG | + | chr4_4:79417059-79417078 | None:intergenic | 30.0% |
| ACATATTGTGGCTATGTAAA+AGG | + | chr4_4:79417069-79417088 | None:intergenic | 30.0% | |
| !! | GATTTTGGAAGGATGAGAAT+TGG | + | chr4_4:79413334-79413353 | None:intergenic | 35.0% |
| TCCTTCCAAAATCAGCAATA+TGG | - | chr4_4:79413341-79413360 | Msa0706450:three_prime_UTR | 35.0% | |
| CAAACAAATACGTTCTTCTG+TGG | + | chr4_4:79413373-79413392 | None:intergenic | 35.0% | |
| !! | TTTTGGTTGATGTTGAGAGA+TGG | + | chr4_4:79413419-79413438 | None:intergenic | 35.0% |
| GTCCTATTCATAAACAGAAG+CGG | - | chr4_4:79413480-79413499 | Msa0706450:three_prime_UTR | 35.0% | |
| ATCTTCAAAAAACCGACCTA+TGG | - | chr4_4:79413505-79413524 | Msa0706450:three_prime_UTR | 35.0% | |
| TTCTCAAATACGACCTTGAA+TGG | - | chr4_4:79413580-79413599 | Msa0706450:intron | 35.0% | |
| !! | CTTGATGGTGCTAACTATTT+GGG | - | chr4_4:79413696-79413715 | Msa0706450:intron | 35.0% |
| TCACTAAAAGACCTGTTAAG+TGG | - | chr4_4:79413793-79413812 | Msa0706450:intron | 35.0% | |
| ! | TAATTGAACCTGCGATTTTG+TGG | + | chr4_4:79413918-79413937 | None:intergenic | 35.0% |
| ACAAAATCGCAGGTTCAATT+AGG | - | chr4_4:79413917-79413936 | Msa0706450:intron | 35.0% | |
| CAAAATCGCAGGTTCAATTA+GGG | - | chr4_4:79413918-79413937 | Msa0706450:intron | 35.0% | |
| AACACAAGAACAAACACAAC+AGG | + | chr4_4:79414316-79414335 | None:intergenic | 35.0% | |
| ! | AAACAGGGGAAGGAAATTTT+GGG | + | chr4_4:79414500-79414519 | None:intergenic | 35.0% |
| TTCGGACAGTAACAAAAATG+GGG | + | chr4_4:79414525-79414544 | None:intergenic | 35.0% | |
| CTTCGGACAGTAACAAAAAT+GGG | + | chr4_4:79414526-79414545 | None:intergenic | 35.0% | |
| TCTTCGGACAGTAACAAAAA+TGG | + | chr4_4:79414527-79414546 | None:intergenic | 35.0% | |
| GTTACGAGAATTGGAAGAAT+TGG | - | chr4_4:79414639-79414658 | Msa0706450:intron | 35.0% | |
| GATCCTAGAAAGCAACTTAA+CGG | - | chr4_4:79414813-79414832 | Msa0706450:intron | 35.0% | |
| TTCAAACTCATACTTTCCGT+CGG | + | chr4_4:79414855-79414874 | None:intergenic | 35.0% | |
| AAGTTTCAAAAGTCCCAAAG+AGG | + | chr4_4:79414899-79414918 | None:intergenic | 35.0% | |
| TTAAAGCAGTGTCATACATG+TGG | + | chr4_4:79415025-79415044 | None:intergenic | 35.0% | |
| !!! | TCCTGTCTATTGTTTTAGTG+AGG | - | chr4_4:79415240-79415259 | Msa0706450:intron | 35.0% |
| !! | CTTTTCTGTATCTTTGGTTC+AGG | + | chr4_4:79415271-79415290 | None:intergenic | 35.0% |
| ! | CTCCTTCTTTTCTGTATCTT+TGG | + | chr4_4:79415277-79415296 | None:intergenic | 35.0% |
| TTAGATTTAGAAGCTGCTGT+TGG | - | chr4_4:79415307-79415326 | Msa0706450:intron | 35.0% | |
| !!! | TACTTTGTTTTGTTGGGAGT+TGG | - | chr4_4:79415444-79415463 | Msa0706450:exon | 35.0% |
| !!! | ACTTTGTTTTGTTGGGAGTT+GGG | - | chr4_4:79415445-79415464 | Msa0706450:exon | 35.0% |
| !!! | TACTTTGTTTTGTTGGGAGT+TGG | - | chr4_4:79415444-79415463 | Msa0706450:exon | 35.0% |
| ! | TTATAAAGCTTGAGGGTATG+AGG | - | chr4_4:79415702-79415721 | Msa0706450:intron | 35.0% |
| GTAGCATTTGATGAAGAATG+AGG | - | chr4_4:79415751-79415770 | Msa0706450:intron | 35.0% | |
| ATACAGACACACCTAAAACT+CGG | + | chr4_4:79415848-79415867 | None:intergenic | 35.0% | |
| TATAAGTGTCCAATGAGTGT+AGG | + | chr4_4:79415889-79415908 | None:intergenic | 35.0% | |
| !! | TTTTTGGGGACACTTATTTG+AGG | + | chr4_4:79415916-79415935 | None:intergenic | 35.0% |
| CATGCTTAGTGAACCAAAAA+TGG | + | chr4_4:79416028-79416047 | None:intergenic | 35.0% | |
| AGAGGAAATATGGATGAAAG+AGG | + | chr4_4:79416263-79416282 | None:intergenic | 35.0% | |
| ACAATGAAAGAAAACGAGCA+AGG | + | chr4_4:79416324-79416343 | None:intergenic | 35.0% | |
| ATTTATTGGACGTAGTGCTT+TGG | - | chr4_4:79416350-79416369 | Msa0706450:intron | 35.0% | |
| AACATAAAACAAGGGAGCTA+TGG | + | chr4_4:79416580-79416599 | None:intergenic | 35.0% | |
| GCTAAAGATAAATAGCTTCC+GGG | - | chr4_4:79416707-79416726 | Msa0706450:intron | 35.0% | |
| CTTAGGGTCAAATTTGTGTA+AGG | - | chr4_4:79416937-79416956 | Msa0706450:intron | 35.0% | |
| ! | GGCTATGTAAAAGGCTTTTA+AGG | + | chr4_4:79417060-79417079 | None:intergenic | 35.0% |
| GGTAACAGAATCACATATTG+TGG | + | chr4_4:79417081-79417100 | None:intergenic | 35.0% | |
| ATATGTGATTCTGTTACCAG+TGG | - | chr4_4:79417083-79417102 | Msa0706450:CDS | 35.0% | |
| !! | CTTTTAGCTGTTGGAAGTTA+AGG | - | chr4_4:79417277-79417296 | Msa0706450:CDS | 35.0% |
| GACACATAATAAGAGATGGA+GGG | + | chr4_4:79417442-79417461 | None:intergenic | 35.0% | |
| TGACACATAATAAGAGATGG+AGG | + | chr4_4:79417443-79417462 | None:intergenic | 35.0% | |
| CACTGACACATAATAAGAGA+TGG | + | chr4_4:79417446-79417465 | None:intergenic | 35.0% | |
| !!! | GCCATATTGCTGATTTTGGA+AGG | + | chr4_4:79413345-79413364 | None:intergenic | 40.0% |
| !!! | AGAGGCCATATTGCTGATTT+TGG | + | chr4_4:79413349-79413368 | None:intergenic | 40.0% |
| ATGTTGAGAGATGGAAGAAG+AGG | + | chr4_4:79413410-79413429 | None:intergenic | 40.0% | |
| AGGACTGAATGAAACTGTTC+CGG | + | chr4_4:79413465-79413484 | None:intergenic | 40.0% | |
| ! | TGCCGCTTCTGTTTATGAAT+AGG | + | chr4_4:79413485-79413504 | None:intergenic | 40.0% |
| ATGTTGAAGTTGCGTCCTTT+GGG | + | chr4_4:79413540-79413559 | None:intergenic | 40.0% | |
| AATGTTGAAGTTGCGTCCTT+TGG | + | chr4_4:79413541-79413560 | None:intergenic | 40.0% | |
| TGAGAACACCAAGCTGATAT+TGG | + | chr4_4:79413566-79413585 | None:intergenic | 40.0% | |
| TACGACCTTGAATGGAACAA+TGG | - | chr4_4:79413588-79413607 | Msa0706450:intron | 40.0% | |
| TTAGCACCATCAAGCCAATT+GGG | + | chr4_4:79413690-79413709 | None:intergenic | 40.0% | |
| !! | GCTTGATGGTGCTAACTATT+TGG | - | chr4_4:79413695-79413714 | Msa0706450:intron | 40.0% |
| GAGTAGAAGATCCACTTAAC+AGG | + | chr4_4:79413807-79413826 | None:intergenic | 40.0% | |
| GTTAAGTGGATCTTCTACTC+CGG | - | chr4_4:79413807-79413826 | Msa0706450:intron | 40.0% | |
| ATATGTAGCCACAAAATCGC+AGG | - | chr4_4:79413907-79413926 | Msa0706450:intron | 40.0% | |
| GTGTCATCACTACAATAGGT+TGG | + | chr4_4:79414146-79414165 | None:intergenic | 40.0% | |
| GGAATGCTGCAAGAAAGAAA+TGG | + | chr4_4:79414277-79414296 | None:intergenic | 40.0% | |
| AAGAACAAACACAACAGGTG+GGG | + | chr4_4:79414311-79414330 | None:intergenic | 40.0% | |
| CAAGAACAAACACAACAGGT+GGG | + | chr4_4:79414312-79414331 | None:intergenic | 40.0% | |
| ACAAGAACAAACACAACAGG+TGG | + | chr4_4:79414313-79414332 | None:intergenic | 40.0% | |
| !! | ATTTTGGGGATGTCGAGAAT+GGG | + | chr4_4:79414485-79414504 | None:intergenic | 40.0% |
| !! | AATTTTGGGGATGTCGAGAA+TGG | + | chr4_4:79414486-79414505 | None:intergenic | 40.0% |
| ! | AACAGGGGAAGGAAATTTTG+GGG | + | chr4_4:79414499-79414518 | None:intergenic | 40.0% |
| ! | CAAACAGGGGAAGGAAATTT+TGG | + | chr4_4:79414501-79414520 | None:intergenic | 40.0% |
| CAAAATTTCCTTCCCCTGTT+TGG | - | chr4_4:79414499-79414518 | Msa0706450:intron | 40.0% | |
| AACAAAAATGGGGCCAAACA+GGG | + | chr4_4:79414515-79414534 | None:intergenic | 40.0% | |
| TAACAAAAATGGGGCCAAAC+AGG | + | chr4_4:79414516-79414535 | None:intergenic | 40.0% | |
| TGTTCTTCGTAACAGAAGTG+AGG | + | chr4_4:79414590-79414609 | None:intergenic | 40.0% | |
| ATTGGAAGAATTGGAGCGAA+AGG | - | chr4_4:79414648-79414667 | Msa0706450:intron | 40.0% | |
| GAACTTCAATCCAGTTTCCA+TGG | + | chr4_4:79414677-79414696 | None:intergenic | 40.0% | |
| CACACACTGTTATAACATGC+TGG | - | chr4_4:79414769-79414788 | Msa0706450:intron | 40.0% | |
| AACATGCTGGCAATGCAAAA+CGG | - | chr4_4:79414782-79414801 | Msa0706450:intron | 40.0% | |
| TGCTCATGTGATGACATTTG+AGG | - | chr4_4:79415183-79415202 | Msa0706450:intron | 40.0% | |
| ! | CATGTGATGACATTTGAGGT+TGG | - | chr4_4:79415187-79415206 | Msa0706450:intron | 40.0% |
| GCCTCACTAAAACAATAGAC+AGG | + | chr4_4:79415244-79415263 | None:intergenic | 40.0% | |
| ATAAACCGTACGCTATTGCT+GGG | + | chr4_4:79415377-79415396 | None:intergenic | 40.0% | |
| TATAAACCGTACGCTATTGC+TGG | + | chr4_4:79415378-79415397 | None:intergenic | 40.0% | |
| GCGTACGGTTTATAATTGTG+AGG | - | chr4_4:79415384-79415403 | Msa0706450:intron | 40.0% | |
| GTTGGAAGCCGCATTATAAT+TGG | - | chr4_4:79415636-79415655 | Msa0706450:intron | 40.0% | |
| AAGAACTCCTGGCTCATATT+AGG | - | chr4_4:79415726-79415745 | Msa0706450:intron | 40.0% | |
| AGAACTCCTGGCTCATATTA+GGG | - | chr4_4:79415727-79415746 | Msa0706450:intron | 40.0% | |
| GCATTTGATGAAGAATGAGG+TGG | - | chr4_4:79415754-79415773 | Msa0706450:intron | 40.0% | |
| TGATGAAGAATGAGGTGGTT+TGG | - | chr4_4:79415759-79415778 | Msa0706450:intron | 40.0% | |
| TTGATCACAAGAGATGACGT+TGG | - | chr4_4:79415791-79415810 | Msa0706450:intron | 40.0% | |
| TAGAGGTGAATTAGTGGTGA+AGG | + | chr4_4:79415817-79415836 | None:intergenic | 40.0% | |
| GTGTGATAGAGGTGAATTAG+TGG | + | chr4_4:79415823-79415842 | None:intergenic | 40.0% | |
| TACAGACACACCTAAAACTC+GGG | + | chr4_4:79415847-79415866 | None:intergenic | 40.0% | |
| AGTTGGATACCTACACTCAT+TGG | - | chr4_4:79415877-79415896 | Msa0706450:intron | 40.0% | |
| TCTGCCTTGTAGAAATCAGT+AGG | - | chr4_4:79416048-79416067 | Msa0706450:intron | 40.0% | |
| AATATTTGTGCACGTGTCGA+TGG | + | chr4_4:79416118-79416137 | None:intergenic | 40.0% | |
| GAGGACTTGAAGAGGAAATA+TGG | + | chr4_4:79416273-79416292 | None:intergenic | 40.0% | |
| AACATAGAGGCAAAAACCCA+GGG | + | chr4_4:79416388-79416407 | None:intergenic | 40.0% | |
| AAACATAGAGGCAAAAACCC+AGG | + | chr4_4:79416389-79416408 | None:intergenic | 40.0% | |
| !! | TTTGTTGTTGACTGTAGCGT+GGG | - | chr4_4:79416455-79416474 | Msa0706450:intron | 40.0% |
| AGTGACAAAGTCATAGAGGA+AGG | + | chr4_4:79416491-79416510 | None:intergenic | 40.0% | |
| GATGAGTGACAAAGTCATAG+AGG | + | chr4_4:79416495-79416514 | None:intergenic | 40.0% | |
| GTACAAAGAGAATCTAGCCA+TGG | + | chr4_4:79416519-79416538 | None:intergenic | 40.0% | |
| ! | TTTGATGATACACCGCCAAA+AGG | - | chr4_4:79416649-79416668 | Msa0706450:intron | 40.0% |
| ! | TTGATGATACACCGCCAAAA+GGG | - | chr4_4:79416650-79416669 | Msa0706450:intron | 40.0% |
| TGAGCAACACAAACCTTAGA+GGG | + | chr4_4:79416907-79416926 | None:intergenic | 40.0% | |
| ATGAGCAACACAAACCTTAG+AGG | + | chr4_4:79416908-79416927 | None:intergenic | 40.0% | |
| GTTTATTGCATGGCCATTAC+AGG | - | chr4_4:79417252-79417271 | Msa0706450:CDS | 40.0% | |
| !! | ACAGCTAAAAGCACCTGTAA+TGG | + | chr4_4:79417268-79417287 | None:intergenic | 40.0% |
| !! | TTACAGGTGCTTTTAGCTGT+TGG | - | chr4_4:79417268-79417287 | Msa0706450:CDS | 40.0% |
| ! | TTTTGTCACAGCTAGTGCAT+AGG | - | chr4_4:79417370-79417389 | Msa0706450:CDS | 40.0% |
| TTTGTCACAGCTAGTGCATA+GGG | - | chr4_4:79417371-79417390 | Msa0706450:CDS | 40.0% | |
| CAGTATCACTGTGAACAACG+TGG | + | chr4_4:79413302-79413321 | None:intergenic | 45.0% | |
| GGAAGGATGAGAATTGGGAA+TGG | + | chr4_4:79413328-79413347 | None:intergenic | 45.0% | |
| AATACGTTCTTCTGTGGCAG+AGG | + | chr4_4:79413367-79413386 | None:intergenic | 45.0% | |
| !! | CGTTGGAATTGGGTCGTTTT+TGG | + | chr4_4:79413436-79413455 | None:intergenic | 45.0% |
| AAACCGACCTATGGTACGAT+TGG | - | chr4_4:79413514-79413533 | Msa0706450:three_prime_UTR | 45.0% | |
| !! | AGGTGCCATTGTTCCATTCA+AGG | + | chr4_4:79413596-79413615 | None:intergenic | 45.0% |
| ! | GTCGAGAGTATAGAGAAAGG+AGG | + | chr4_4:79413616-79413635 | None:intergenic | 45.0% |
| ! | AGGGTCGAGAGTATAGAGAA+AGG | + | chr4_4:79413619-79413638 | None:intergenic | 45.0% |
| TGGGTATTCTTCGTCCCAAT+TGG | - | chr4_4:79413673-79413692 | Msa0706450:intron | 45.0% | |
| GTTAGCACCATCAAGCCAAT+TGG | + | chr4_4:79413691-79413710 | None:intergenic | 45.0% | |
| ! | AGCCTAATGATGATGCTGCT+GGG | + | chr4_4:79414380-79414399 | None:intergenic | 45.0% |
| ! | TAGCCTAATGATGATGCTGC+TGG | + | chr4_4:79414381-79414400 | None:intergenic | 45.0% |
| ACAAAAATGGGGCCAAACAG+GGG | + | chr4_4:79414514-79414533 | None:intergenic | 45.0% | |
| GCAAAGAACCAGCTGTTCTT+CGG | + | chr4_4:79414543-79414562 | None:intergenic | 45.0% | |
| AAGAACAACGTTACTGTGCG+AGG | - | chr4_4:79414603-79414622 | Msa0706450:intron | 45.0% | |
| ! | CTGCCGTTAAGTTGCTTTCT+AGG | + | chr4_4:79414819-79414838 | None:intergenic | 45.0% |
| CAGTGTTAAACAGAGACCGA+CGG | - | chr4_4:79414836-79414855 | Msa0706450:intron | 45.0% | |
| AAGCAGTGTCATACATGTGG+TGG | + | chr4_4:79415022-79415041 | None:intergenic | 45.0% | |
| !! | ATATGATGGTTGGTGAGTGC+AGG | - | chr4_4:79415154-79415173 | Msa0706450:intron | 45.0% |
| GATTTAGAAGCTGCTGTTGG+TGG | - | chr4_4:79415310-79415329 | Msa0706450:intron | 45.0% | |
| GAACTCCTGGCTCATATTAG+GGG | - | chr4_4:79415728-79415747 | Msa0706450:intron | 45.0% | |
| AACTCCTGGCTCATATTAGG+GGG | - | chr4_4:79415729-79415748 | Msa0706450:intron | 45.0% | |
| ! | AAAACTCGGGAGTGTGATAG+AGG | + | chr4_4:79415834-79415853 | None:intergenic | 45.0% |
| ! | CTATCACACTCCCGAGTTTT+AGG | - | chr4_4:79415834-79415853 | Msa0706450:intron | 45.0% |
| GTCTGTATATCGACACGAGT+TGG | - | chr4_4:79415860-79415879 | Msa0706450:intron | 45.0% | |
| ATTGCATTTCTCTCATCGCC+AGG | - | chr4_4:79416199-79416218 | Msa0706450:intron | 45.0% | |
| TTGCATTTCTCTCATCGCCA+GGG | - | chr4_4:79416200-79416219 | Msa0706450:intron | 45.0% | |
| GTTTACTTCCCAGTCTCTTC+TGG | - | chr4_4:79416231-79416250 | Msa0706450:intron | 45.0% | |
| GAAGTCAAGAGGACTTGAAG+AGG | + | chr4_4:79416281-79416300 | None:intergenic | 45.0% | |
| TTGACTTCTCACCAGGGATA+AGG | - | chr4_4:79416293-79416312 | Msa0706450:intron | 45.0% | |
| GCAAGGAAAAACCTTATCCC+TGG | + | chr4_4:79416307-79416326 | None:intergenic | 45.0% | |
| !! | TTTGGTTCTATACTCTCCCC+TGG | - | chr4_4:79416368-79416387 | Msa0706450:intron | 45.0% |
| !! | TTGGTTCTATACTCTCCCCT+GGG | - | chr4_4:79416369-79416388 | Msa0706450:intron | 45.0% |
| ACATAGAGGCAAAAACCCAG+GGG | + | chr4_4:79416387-79416406 | None:intergenic | 45.0% | |
| AACAACATCAAAGCGCAGAG+AGG | + | chr4_4:79416413-79416432 | None:intergenic | 45.0% | |
| TCTGCGCTTTGATGTTGTTC+AGG | - | chr4_4:79416414-79416433 | Msa0706450:intron | 45.0% | |
| !! | CTTTGTTGTTGACTGTAGCG+TGG | - | chr4_4:79416454-79416473 | Msa0706450:intron | 45.0% |
| GACTTTGTCACTCATCACCA+TGG | - | chr4_4:79416499-79416518 | Msa0706450:intron | 45.0% | |
| ATAAATAGCTTCCGGGCATG+TGG | - | chr4_4:79416714-79416733 | Msa0706450:intron | 45.0% | |
| TTCCGGGCATGTGGTTAATT+TGG | - | chr4_4:79416723-79416742 | Msa0706450:intron | 45.0% | |
| GTCCAAATTAACCACATGCC+CGG | + | chr4_4:79416728-79416747 | None:intergenic | 45.0% | |
| CTACGTATGACAAAGGGAAC+AGG | + | chr4_4:79416838-79416857 | None:intergenic | 45.0% | |
| GAGATTGACATGTCCCTCTA+AGG | - | chr4_4:79416891-79416910 | Msa0706450:intron | 45.0% | |
| GTAAGATGCTAGATTGCCAC+TGG | + | chr4_4:79417102-79417121 | None:intergenic | 45.0% | |
| TAGCTGTTGGAAGTTAAGGC+AGG | - | chr4_4:79417281-79417300 | Msa0706450:CDS | 45.0% | |
| TCTCAAGACCACAGAGTAGT+AGG | + | chr4_4:79417339-79417358 | None:intergenic | 45.0% | |
| GAATGAAACTGTTCCGGCCA+CGG | + | chr4_4:79413459-79413478 | None:intergenic | 50.0% | |
| CTTTGGGCCAATCGTACCAT+AGG | + | chr4_4:79413524-79413543 | None:intergenic | 50.0% | |
| ! | CTATGGTACGATTGGCCCAA+AGG | - | chr4_4:79413522-79413541 | Msa0706450:three_prime_UTR | 50.0% |
| !! | CTTCGTCCCAATTGGCTTGA+TGG | - | chr4_4:79413681-79413700 | Msa0706450:intron | 50.0% |
| CTGGGTGTGGCTACTTCAAT+TGG | + | chr4_4:79414362-79414381 | None:intergenic | 50.0% | |
| ! | AATGATGATGCTGCTGGGTG+TGG | + | chr4_4:79414375-79414394 | None:intergenic | 50.0% |
| CACCCAGCAGCATCATCATT+AGG | - | chr4_4:79414375-79414394 | Msa0706450:intron | 50.0% | |
| GTTACTGTCCGAAGAACAGC+TGG | - | chr4_4:79414532-79414551 | Msa0706450:intron | 50.0% | |
| GGAAGAATTGGAGCGAAAGG+AGG | - | chr4_4:79414651-79414670 | Msa0706450:intron | 50.0% | |
| !! | ATTTGAGGTTGGTGCAGTGC+TGG | - | chr4_4:79415198-79415217 | Msa0706450:intron | 50.0% |
| ! | TTAGAAGCTGCTGTTGGTGG+TGG | - | chr4_4:79415313-79415332 | Msa0706450:intron | 50.0% |
| !!! | CTGTTGGTGGTGGTTTTCGT+GGG | - | chr4_4:79415323-79415342 | Msa0706450:intron | 50.0% |
| GGGTATGAGGTAAGAACTCC+TGG | - | chr4_4:79415715-79415734 | Msa0706450:intron | 50.0% | |
| GGACAAAGCCAGAAGAGACT+GGG | + | chr4_4:79416242-79416261 | None:intergenic | 50.0% | |
| AGGACAAAGCCAGAAGAGAC+TGG | + | chr4_4:79416243-79416262 | None:intergenic | 50.0% | |
| AGTCCTCTTGACTTCTCACC+AGG | - | chr4_4:79416286-79416305 | Msa0706450:intron | 50.0% | |
| GTCCTCTTGACTTCTCACCA+GGG | - | chr4_4:79416287-79416306 | Msa0706450:intron | 50.0% | |
| ATCCCTGGTGAGAAGTCAAG+AGG | + | chr4_4:79416292-79416311 | None:intergenic | 50.0% | |
| GCGCAGAGAGGAAAACATAG+AGG | + | chr4_4:79416401-79416420 | None:intergenic | 50.0% | |
| ACGCTCATTCTGCTACCACA+GGG | - | chr4_4:79416553-79416572 | Msa0706450:intron | 50.0% | |
| ACACTCAGCCTACTACTCTG+TGG | - | chr4_4:79417328-79417347 | Msa0706450:CDS | 50.0% | |
| GGGCCAATCGTACCATAGGT+CGG | + | chr4_4:79413520-79413539 | None:intergenic | 55.0% | |
| ACAGGTGGGGACACAATGTG+TGG | + | chr4_4:79414298-79414317 | None:intergenic | 55.0% | |
| TTGGGGATGTCGAGAATGGG+TGG | + | chr4_4:79414482-79414501 | None:intergenic | 55.0% | |
| AAATGGGGCCAAACAGGGGA+AGG | + | chr4_4:79414510-79414529 | None:intergenic | 55.0% | |
| ATTGGAGCGAAAGGAGGCCA+TGG | - | chr4_4:79414657-79414676 | Msa0706450:intron | 55.0% | |
| CGAAAGGAGGCCATGGAAAC+TGG | - | chr4_4:79414664-79414683 | Msa0706450:intron | 55.0% | |
| ! | CAGTGCTGGACGATGAGCAT+TGG | - | chr4_4:79415212-79415231 | Msa0706450:intron | 55.0% |
| !!! | GCTGTTGGTGGTGGTTTTCG+TGG | - | chr4_4:79415322-79415341 | Msa0706450:intron | 55.0% |
| AGCCACCCAGCAATAGCGTA+CGG | - | chr4_4:79415369-79415388 | Msa0706450:intron | 55.0% | |
| AACCGTACGCTATTGCTGGG+TGG | + | chr4_4:79415374-79415393 | None:intergenic | 55.0% | |
| GCTACCCCCTAATATGAGCC+AGG | + | chr4_4:79415736-79415755 | None:intergenic | 55.0% | |
| TTCTCTCATCGCCAGGGATG+TGG | - | chr4_4:79416206-79416225 | Msa0706450:intron | 55.0% | |
| TCTCTCATCGCCAGGGATGT+GGG | - | chr4_4:79416207-79416226 | Msa0706450:intron | 55.0% | |
| GAAGTAAACCCCCACATCCC+TGG | + | chr4_4:79416220-79416239 | None:intergenic | 55.0% | |
| GACGCTCATTCTGCTACCAC+AGG | - | chr4_4:79416552-79416571 | Msa0706450:intron | 55.0% | |
| ACGACCCAATTCCAACGCCG+TGG | - | chr4_4:79413439-79413458 | Msa0706450:three_prime_UTR | 60.0% | |
| !! | GCTGGACGATGAGCATTGGC+AGG | - | chr4_4:79415216-79415235 | Msa0706450:intron | 60.0% |
| CTCTCATCGCCAGGGATGTG+GGG | - | chr4_4:79416208-79416227 | Msa0706450:intron | 60.0% | |
| TCTCATCGCCAGGGATGTGG+GGG | - | chr4_4:79416209-79416228 | Msa0706450:intron | 60.0% | |
| CAAGGGAGCTATGGACCCTG+TGG | + | chr4_4:79416571-79416590 | None:intergenic | 60.0% | |
| ! | CCGGCCACGGCGTTGGAATT+GGG | + | chr4_4:79413446-79413465 | None:intergenic | 65.0% |
| CCCAATTCCAACGCCGTGGC+CGG | - | chr4_4:79413443-79413462 | Msa0706450:three_prime_UTR | 65.0% | |
| ! | TCCGGCCACGGCGTTGGAAT+TGG | + | chr4_4:79413447-79413466 | None:intergenic | 65.0% |
| AACTGTTCCGGCCACGGCGT+TGG | + | chr4_4:79413453-79413472 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 79413268 | 79417549 | 79413268 | ID=Msa0706450;Name=Msa0706450 |
| chr4_4 | mRNA | 79413268 | 79417549 | 79413268 | ID=Msa0706450-mRNA-1;Parent=Msa0706450;Name=Msa0706450-mRNA-1;_AED=0.13;_eAED=0.13;_QI=92|1|1|1|0.5|0.33|3|312|220 |
| chr4_4 | exon | 79413268 | 79413543 | 79413268 | ID=Msa0706450-mRNA-1:exon:25596;Parent=Msa0706450-mRNA-1 |
| chr4_4 | exon | 79415412 | 79415641 | 79415412 | ID=Msa0706450-mRNA-1:exon:25595;Parent=Msa0706450-mRNA-1 |
| chr4_4 | exon | 79416989 | 79417549 | 79416989 | ID=Msa0706450-mRNA-1:exon:25594;Parent=Msa0706450-mRNA-1 |
| chr4_4 | five_prime_UTR | 79417458 | 79417549 | 79417458 | ID=Msa0706450-mRNA-1:five_prime_utr;Parent=Msa0706450-mRNA-1 |
| chr4_4 | CDS | 79416989 | 79417457 | 79416989 | ID=Msa0706450-mRNA-1:cds;Parent=Msa0706450-mRNA-1 |
| chr4_4 | CDS | 79415448 | 79415641 | 79415448 | ID=Msa0706450-mRNA-1:cds;Parent=Msa0706450-mRNA-1 |
| chr4_4 | three_prime_UTR | 79415412 | 79415447 | 79415412 | ID=Msa0706450-mRNA-1:three_prime_utr;Parent=Msa0706450-mRNA-1 |
| chr4_4 | three_prime_UTR | 79413268 | 79413543 | 79413268 | ID=Msa0706450-mRNA-1:three_prime_utr;Parent=Msa0706450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
