Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226450 | PNY09511.1 | 93.064 | 173 | 11 | 1 | 6 | 178 | 3 | 174 | 1.38e-114 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226450 | sp|Q9SSR1|Y1259_ARATH | 71.264 | 174 | 47 | 3 | 6 | 178 | 1 | 172 | 2.14e-85 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226450 | A0A2K3P2K0 | 93.064 | 173 | 11 | 1 | 6 | 178 | 3 | 174 | 6.57e-115 | 332 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0226450 | 0.817469 | 3.244280e-52 | -8.615850e-47 |
| Msa0007810 | Msa0226450 | 0.817508 | 3.179233e-52 | -8.615850e-47 |
| Msa0009530 | Msa0226450 | 0.820222 | 7.686396e-53 | -8.615850e-47 |
| Msa0009560 | Msa0226450 | 0.802437 | 5.612514e-49 | -8.615850e-47 |
| Msa0011060 | Msa0226450 | 0.803867 | 2.839883e-49 | -8.615850e-47 |
| Msa0014970 | Msa0226450 | 0.800277 | 1.554500e-48 | -8.615850e-47 |
| Msa0017300 | Msa0226450 | 0.813758 | 2.176728e-51 | -8.615850e-47 |
| Msa0024500 | Msa0226450 | 0.837345 | 5.491182e-57 | -8.615850e-47 |
| Msa0027030 | Msa0226450 | 0.827986 | 1.155310e-54 | -8.615850e-47 |
| Msa0034050 | Msa0226450 | 0.810095 | 1.366505e-50 | -8.615850e-47 |
| Msa0037180 | Msa0226450 | -0.867423 | 1.383470e-65 | -8.615850e-47 |
| Msa0037650 | Msa0226450 | 0.802158 | 6.405837e-49 | -8.615850e-47 |
| Msa0040860 | Msa0226450 | 0.862938 | 3.553478e-64 | -8.615850e-47 |
| Msa0044530 | Msa0226450 | 0.801518 | 8.668760e-49 | -8.615850e-47 |
| Msa0044780 | Msa0226450 | 0.836097 | 1.142608e-56 | -8.615850e-47 |
| Msa0050320 | Msa0226450 | 0.814230 | 1.713051e-51 | -8.615850e-47 |
| Msa0053260 | Msa0226450 | 0.808768 | 2.633349e-50 | -8.615850e-47 |
| Msa0056230 | Msa0226450 | 0.811812 | 5.805612e-51 | -8.615850e-47 |
| Msa0065670 | Msa0226450 | 0.819074 | 1.405688e-52 | -8.615850e-47 |
| Msa0075990 | Msa0226450 | 0.808171 | 3.531061e-50 | -8.615850e-47 |
| Msa0089470 | Msa0226450 | 0.809095 | 2.240979e-50 | -8.615850e-47 |
| Msa0091220 | Msa0226450 | 0.801503 | 8.730812e-49 | -8.615850e-47 |
| Msa0092220 | Msa0226450 | -0.851787 | 7.068060e-61 | -8.615850e-47 |
| Msa0094900 | Msa0226450 | 0.806316 | 8.729389e-50 | -8.615850e-47 |
| Msa0095810 | Msa0226450 | 0.811148 | 8.091703e-51 | -8.615850e-47 |
| Msa0098500 | Msa0226450 | 0.807090 | 5.989303e-50 | -8.615850e-47 |
| Msa0103830 | Msa0226450 | -0.809529 | 1.809340e-50 | -8.615850e-47 |
| Msa0108500 | Msa0226450 | 0.801671 | 8.067697e-49 | -8.615850e-47 |
| Msa0120320 | Msa0226450 | 0.809151 | 2.180551e-50 | -8.615850e-47 |
| Msa0135470 | Msa0226450 | 0.826944 | 2.053848e-54 | -8.615850e-47 |
| Msa0136180 | Msa0226450 | 0.812148 | 4.904287e-51 | -8.615850e-47 |
| Msa0138990 | Msa0226450 | 0.801516 | 8.679071e-49 | -8.615850e-47 |
| Msa0154720 | Msa0226450 | 0.815266 | 1.009752e-51 | -8.615850e-47 |
| Msa0167150 | Msa0226450 | 0.813810 | 2.119994e-51 | -8.615850e-47 |
| Msa0173600 | Msa0226450 | 0.801973 | 6.992671e-49 | -8.615850e-47 |
| Msa0174060 | Msa0226450 | 0.811308 | 7.470399e-51 | -8.615850e-47 |
| Msa0177320 | Msa0226450 | -0.852353 | 4.882240e-61 | -8.615850e-47 |
| Msa0178440 | Msa0226450 | 0.814296 | 1.656432e-51 | -8.615850e-47 |
| Msa0194750 | Msa0226450 | 0.816594 | 5.102294e-52 | -8.615850e-47 |
| Msa0204950 | Msa0226450 | -0.812910 | 3.341952e-51 | -8.615850e-47 |
| Msa0206040 | Msa0226450 | 0.822041 | 2.928092e-53 | -8.615850e-47 |
| Msa0208040 | Msa0226450 | 0.826034 | 3.384167e-54 | -8.615850e-47 |
| Msa0208710 | Msa0226450 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa0209370 | Msa0226450 | 0.822405 | 2.411212e-53 | -8.615850e-47 |
| Msa0216150 | Msa0226450 | 0.857399 | 1.675866e-62 | -8.615850e-47 |
| Msa0216340 | Msa0226450 | -0.855742 | 5.142229e-62 | -8.615850e-47 |
| Msa0225070 | Msa0226450 | 0.854874 | 9.202625e-62 | -8.615850e-47 |
| Msa0226450 | Msa0227770 | 0.808629 | 2.819116e-50 | -8.615850e-47 |
| Msa0226450 | Msa0229350 | 0.834906 | 2.285213e-56 | -8.615850e-47 |
| Msa0226450 | Msa0236690 | 0.820415 | 6.941796e-53 | -8.615850e-47 |
| Msa0226450 | Msa0240590 | 0.827997 | 1.148472e-54 | -8.615850e-47 |
| Msa0226450 | Msa0256540 | -0.865835 | 4.425759e-65 | -8.615850e-47 |
| Msa0226450 | Msa0260870 | 0.813802 | 2.128603e-51 | -8.615850e-47 |
| Msa0226450 | Msa0262440 | -0.826597 | 2.486200e-54 | -8.615850e-47 |
| Msa0226450 | Msa0266140 | 0.846890 | 1.634073e-59 | -8.615850e-47 |
| Msa0226450 | Msa0267450 | 0.847427 | 1.164580e-59 | -8.615850e-47 |
| Msa0226450 | Msa0267510 | 0.848470 | 6.006555e-60 | -8.615850e-47 |
| Msa0226450 | Msa0269220 | 0.824825 | 6.544521e-54 | -8.615850e-47 |
| Msa0226450 | Msa0269660 | 0.802123 | 6.513733e-49 | -8.615850e-47 |
| Msa0226450 | Msa0279090 | 0.818214 | 2.203236e-52 | -8.615850e-47 |
| Msa0226450 | Msa0295680 | -0.811601 | 6.451205e-51 | -8.615850e-47 |
| Msa0226450 | Msa0298670 | 0.800700 | 1.274571e-48 | -8.615850e-47 |
| Msa0226450 | Msa0304060 | 0.843808 | 1.115439e-58 | -8.615850e-47 |
| Msa0226450 | Msa0304350 | 0.807154 | 5.805426e-50 | -8.615850e-47 |
| Msa0226450 | Msa0304520 | 0.886296 | 3.868816e-72 | -8.615850e-47 |
| Msa0226450 | Msa0305910 | 0.804472 | 2.125157e-49 | -8.615850e-47 |
| Msa0226450 | Msa0320600 | -0.806643 | 7.445547e-50 | -8.615850e-47 |
| Msa0226450 | Msa0326170 | 0.866000 | 3.924790e-65 | -8.615850e-47 |
| Msa0226450 | Msa0326710 | -0.820351 | 7.182846e-53 | -8.615850e-47 |
| Msa0226450 | Msa0331070 | 0.807508 | 4.883776e-50 | -8.615850e-47 |
| Msa0226450 | Msa0334320 | -0.869427 | 3.121006e-66 | -8.615850e-47 |
| Msa0226450 | Msa0334450 | 0.852063 | 5.902170e-61 | -8.615850e-47 |
| Msa0226450 | Msa0340830 | 0.806192 | 9.269772e-50 | -8.615850e-47 |
| Msa0226450 | Msa0341060 | 0.935658 | 5.997704e-97 | -8.615850e-47 |
| Msa0226450 | Msa0354970 | 0.818189 | 2.232361e-52 | -8.615850e-47 |
| Msa0226450 | Msa0364030 | 0.832506 | 9.090694e-56 | -8.615850e-47 |
| Msa0226450 | Msa0364910 | 0.814822 | 1.266836e-51 | -8.615850e-47 |
| Msa0226450 | Msa0371350 | 0.820245 | 7.594551e-53 | -8.615850e-47 |
| Msa0226450 | Msa0374390 | -0.808106 | 3.645859e-50 | -8.615850e-47 |
| Msa0226450 | Msa0375570 | 0.801065 | 1.073219e-48 | -8.615850e-47 |
| Msa0226450 | Msa0378310 | 0.804345 | 2.259148e-49 | -8.615850e-47 |
| Msa0226450 | Msa0382020 | 0.801206 | 1.004613e-48 | -8.615850e-47 |
| Msa0226450 | Msa0382860 | -0.804046 | 2.606910e-49 | -8.615850e-47 |
| Msa0226450 | Msa0386880 | -0.850989 | 1.188639e-60 | -8.615850e-47 |
| Msa0226450 | Msa0387740 | 0.804369 | 2.233362e-49 | -8.615850e-47 |
| Msa0226450 | Msa0403740 | 0.831790 | 1.366769e-55 | -8.615850e-47 |
| Msa0226450 | Msa0412580 | 0.836653 | 8.246866e-57 | -8.615850e-47 |
| Msa0226450 | Msa0419420 | 0.822935 | 1.815177e-53 | -8.615850e-47 |
| Msa0226450 | Msa0428210 | -0.808102 | 3.653076e-50 | -8.615850e-47 |
| Msa0226450 | Msa0428330 | 0.818566 | 1.833059e-52 | -8.615850e-47 |
| Msa0226450 | Msa0432970 | -0.802808 | 4.706340e-49 | -8.615850e-47 |
| Msa0226450 | Msa0438680 | 0.824486 | 7.864935e-54 | -8.615850e-47 |
| Msa0226450 | Msa0450890 | 0.824505 | 7.783864e-54 | -8.615850e-47 |
| Msa0226450 | Msa0456450 | 0.844480 | 7.365077e-59 | -8.615850e-47 |
| Msa0226450 | Msa0457070 | 0.852796 | 3.649501e-61 | -8.615850e-47 |
| Msa0226450 | Msa0462740 | 0.800867 | 1.178077e-48 | -8.615850e-47 |
| Msa0226450 | Msa0474570 | -0.835632 | 1.498677e-56 | -8.615850e-47 |
| Msa0226450 | Msa0484210 | 0.811197 | 7.895666e-51 | -8.615850e-47 |
| Msa0226450 | Msa0525180 | 0.800491 | 1.405970e-48 | -8.615850e-47 |
| Msa0226450 | Msa0526520 | 0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0226450 | Msa0545750 | 0.816779 | 4.638641e-52 | -8.615850e-47 |
| Msa0226450 | Msa0559450 | 0.819070 | 1.408473e-52 | -8.615850e-47 |
| Msa0226450 | Msa0563440 | -0.814180 | 1.756976e-51 | -8.615850e-47 |
| Msa0226450 | Msa0568460 | 0.812160 | 4.876446e-51 | -8.615850e-47 |
| Msa0226450 | Msa0572730 | 0.809046 | 2.295921e-50 | -8.615850e-47 |
| Msa0226450 | Msa0579070 | 0.871029 | 9.326605e-67 | -8.615850e-47 |
| Msa0226450 | Msa0579170 | 0.818438 | 1.960193e-52 | -8.615850e-47 |
| Msa0226450 | Msa0579230 | 0.832861 | 7.422480e-56 | -8.615850e-47 |
| Msa0226450 | Msa0580410 | 0.812862 | 3.423478e-51 | -8.615850e-47 |
| Msa0226450 | Msa0582270 | 0.839661 | 1.386295e-57 | -8.615850e-47 |
| Msa0226450 | Msa0600350 | -0.800404 | 1.464508e-48 | -8.615850e-47 |
| Msa0226450 | Msa0608780 | 0.807107 | 5.941694e-50 | -8.615850e-47 |
| Msa0226450 | Msa0608940 | 0.802099 | 6.587968e-49 | -8.615850e-47 |
| Msa0226450 | Msa0610240 | 0.802823 | 4.672089e-49 | -8.615850e-47 |
| Msa0226450 | Msa0610700 | 0.867916 | 9.617297e-66 | -8.615850e-47 |
| Msa0226450 | Msa0616890 | 0.805525 | 1.280129e-49 | -8.615850e-47 |
| Msa0226450 | Msa0621670 | 0.826022 | 3.406550e-54 | -8.615850e-47 |
| Msa0226450 | Msa0638300 | 0.806754 | 7.053064e-50 | -8.615850e-47 |
| Msa0226450 | Msa0639530 | 0.827758 | 1.310857e-54 | -8.615850e-47 |
| Msa0226450 | Msa0646030 | 0.813539 | 2.432400e-51 | -8.615850e-47 |
| Msa0226450 | Msa0649250 | 0.808326 | 3.272575e-50 | -8.615850e-47 |
| Msa0226450 | Msa0649530 | 0.813928 | 1.996823e-51 | -8.615850e-47 |
| Msa0226450 | Msa0657110 | 0.824570 | 7.513306e-54 | -8.615850e-47 |
| Msa0226450 | Msa0658520 | 0.804389 | 2.211873e-49 | -8.615850e-47 |
| Msa0226450 | Msa0659020 | 0.841097 | 5.842354e-58 | -8.615850e-47 |
| Msa0226450 | Msa0660150 | -0.809361 | 1.965252e-50 | -8.615850e-47 |
| Msa0226450 | Msa0672950 | -0.805550 | 1.264712e-49 | -8.615850e-47 |
| Msa0226450 | Msa0672980 | -0.809760 | 1.613322e-50 | -8.615850e-47 |
| Msa0226450 | Msa0688880 | 0.801416 | 9.096224e-49 | -8.615850e-47 |
| Msa0226450 | Msa0691740 | 0.819661 | 1.033064e-52 | -8.615850e-47 |
| Msa0226450 | Msa0693340 | 0.811240 | 7.728595e-51 | -8.615850e-47 |
| Msa0226450 | Msa0701090 | 0.842803 | 2.068148e-58 | -8.615850e-47 |
| Msa0226450 | Msa0701800 | 0.808712 | 2.706158e-50 | -8.615850e-47 |
| Msa0226450 | Msa0702020 | 0.801967 | 7.013539e-49 | -8.615850e-47 |
| Msa0226450 | Msa0702690 | 0.830405 | 2.992004e-55 | -8.615850e-47 |
| Msa0226450 | Msa0703430 | 0.805342 | 1.398104e-49 | -8.615850e-47 |
| Msa0226450 | Msa0717540 | 0.818781 | 1.639035e-52 | -8.615850e-47 |
| Msa0226450 | Msa0719270 | -0.826076 | 3.308346e-54 | -8.615850e-47 |
| Msa0226450 | Msa0726170 | 0.820151 | 7.981677e-53 | -8.615850e-47 |
| Msa0226450 | Msa0733240 | 0.842045 | 3.285611e-58 | -8.615850e-47 |
| Msa0226450 | Msa0742370 | 0.813923 | 2.001936e-51 | -8.615850e-47 |
| Msa0226450 | Msa0745140 | -0.850949 | 1.219446e-60 | -8.615850e-47 |
| Msa0226450 | Msa0754020 | 0.843458 | 1.383997e-58 | -8.615850e-47 |
| Msa0226450 | Msa0758880 | 0.808561 | 2.914992e-50 | -8.615850e-47 |
| Msa0226450 | Msa0769910 | 0.844873 | 5.773576e-59 | -8.615850e-47 |
| Msa0226450 | Msa0770540 | 0.827094 | 1.891460e-54 | -8.615850e-47 |
| Msa0226450 | Msa0774360 | 0.817327 | 3.492713e-52 | -8.615850e-47 |
| Msa0226450 | Msa0775660 | -0.812391 | 4.341169e-51 | -8.615850e-47 |
| Msa0226450 | Msa0776640 | -0.849908 | 2.389796e-60 | -8.615850e-47 |
| Msa0226450 | Msa0779450 | 0.803932 | 2.753609e-49 | -8.615850e-47 |
| Msa0226450 | Msa0790650 | 0.809015 | 2.331838e-50 | -8.615850e-47 |
| Msa0226450 | Msa0795910 | 0.813873 | 2.052714e-51 | -8.615850e-47 |
| Msa0226450 | Msa0801920 | 0.801234 | 9.914065e-49 | -8.615850e-47 |
| Msa0226450 | Msa0802950 | 0.820283 | 7.443813e-53 | -8.615850e-47 |
| Msa0226450 | Msa0807100 | 0.850600 | 1.529091e-60 | -8.615850e-47 |
| Msa0226450 | Msa0807870 | 0.868373 | 6.852906e-66 | -8.615850e-47 |
| Msa0226450 | Msa0812020 | 0.828203 | 1.024612e-54 | -8.615850e-47 |
| Msa0226450 | Msa0825920 | -0.844597 | 6.849993e-59 | -8.615850e-47 |
| Msa0226450 | Msa0833030 | 0.833036 | 6.714484e-56 | -8.615850e-47 |
| Msa0226450 | Msa0833360 | 0.811658 | 6.269937e-51 | -8.615850e-47 |
| Msa0226450 | Msa0834830 | 0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0226450 | Msa0838620 | 0.807578 | 4.721214e-50 | -8.615850e-47 |
| Msa0226450 | Msa0840520 | -0.836417 | 9.473045e-57 | -8.615850e-47 |
| Msa0226450 | Msa0844870 | 0.801843 | 7.435189e-49 | -8.615850e-47 |
| Msa0226450 | Msa0844970 | 0.809115 | 2.218816e-50 | -8.615850e-47 |
| Msa0226450 | Msa0848670 | 0.839156 | 1.875303e-57 | -8.615850e-47 |
| Msa0226450 | Msa0852090 | 0.837397 | 5.326499e-57 | -8.615850e-47 |
| Msa0226450 | Msa0865420 | -0.842345 | 2.737464e-58 | -8.615850e-47 |
| Msa0226450 | Msa0868050 | 0.808340 | 3.250390e-50 | -8.615850e-47 |
| Msa0226450 | Msa0868610 | -0.825429 | 4.710046e-54 | -8.615850e-47 |
| Msa0226450 | Msa0925630 | 0.831069 | 2.056982e-55 | -8.615850e-47 |
| Msa0226450 | Msa0931400 | -0.820102 | 8.191089e-53 | -8.615850e-47 |
| Msa0226450 | Msa0931550 | 0.826388 | 2.788765e-54 | -8.615850e-47 |
| Msa0226450 | Msa0936140 | 0.811015 | 8.649154e-51 | -8.615850e-47 |
| Msa0226450 | Msa0941150 | 0.814416 | 1.558143e-51 | -8.615850e-47 |
| Msa0226450 | Msa0950470 | 0.803202 | 3.900738e-49 | -8.615850e-47 |
| Msa0226450 | Msa0950570 | 0.805052 | 1.608119e-49 | -8.615850e-47 |
| Msa0226450 | Msa0967900 | 0.853592 | 2.158856e-61 | -8.615850e-47 |
| Msa0226450 | Msa0998660 | 0.810191 | 1.303112e-50 | -8.615850e-47 |
| Msa0226450 | Msa1002970 | 0.805222 | 1.481157e-49 | -8.615850e-47 |
| Msa0226450 | Msa1014550 | 0.857062 | 2.108030e-62 | -8.615850e-47 |
| Msa0226450 | Msa1024570 | -0.807393 | 5.168149e-50 | -8.615850e-47 |
| Msa0226450 | Msa1031180 | -0.824503 | 7.791704e-54 | -8.615850e-47 |
| Msa0226450 | Msa1031530 | 0.827507 | 1.506150e-54 | -8.615850e-47 |
| Msa0226450 | Msa1039440 | 0.811634 | 6.345748e-51 | -8.615850e-47 |
| Msa0226450 | Msa1052000 | -0.814005 | 1.920430e-51 | -8.615850e-47 |
| Msa0226450 | Msa1055520 | 0.868697 | 5.385819e-66 | -8.615850e-47 |
| Msa0226450 | Msa1070360 | -0.834894 | 2.301394e-56 | -8.615850e-47 |
| Msa0226450 | Msa1070630 | 0.860948 | 1.446313e-63 | -8.615850e-47 |
| Msa0226450 | Msa1078590 | 0.852671 | 3.960804e-61 | -8.615850e-47 |
| Msa0226450 | Msa1078760 | 0.855044 | 8.213908e-62 | -8.615850e-47 |
| Msa0226450 | Msa1085600 | 0.800381 | 1.480175e-48 | -8.615850e-47 |
| Msa0226450 | Msa1088000 | 0.806636 | 7.471632e-50 | -8.615850e-47 |
| Msa0226450 | Msa1088400 | 0.821209 | 4.560419e-53 | -8.615850e-47 |
| Msa0226450 | Msa1088740 | 0.822043 | 2.926124e-53 | -8.615850e-47 |
| Msa0226450 | Msa1093190 | 0.852968 | 3.257697e-61 | -8.615850e-47 |
| Msa0226450 | Msa1101610 | 0.809641 | 1.711756e-50 | -8.615850e-47 |
| Msa0226450 | Msa1118770 | 0.834077 | 3.692721e-56 | -8.615850e-47 |
| Msa0226450 | Msa1119430 | -0.842526 | 2.450038e-58 | -8.615850e-47 |
| Msa0226450 | Msa1121720 | 0.814255 | 1.690742e-51 | -8.615850e-47 |
| Msa0226450 | Msa1129120 | 0.815147 | 1.072690e-51 | -8.615850e-47 |
| Msa0226450 | Msa1132880 | 0.815958 | 7.079003e-52 | -8.615850e-47 |
| Msa0226450 | Msa1143860 | 0.840398 | 8.906900e-58 | -8.615850e-47 |
| Msa0226450 | Msa1156120 | 0.816628 | 5.013553e-52 | -8.615850e-47 |
| Msa0226450 | Msa1158200 | -0.804775 | 1.836911e-49 | -8.615850e-47 |
| Msa0226450 | Msa1158450 | 0.854022 | 1.622542e-61 | -8.615850e-47 |
| Msa0226450 | Msa1165460 | -0.802986 | 4.323361e-49 | -8.615850e-47 |
| Msa0226450 | Msa1169220 | -0.802127 | 6.502087e-49 | -8.615850e-47 |
| Msa0226450 | Msa1169590 | 0.840318 | 9.343741e-58 | -8.615850e-47 |
| Msa0226450 | Msa1190350 | 0.835977 | 1.225358e-56 | -8.615850e-47 |
| Msa0226450 | Msa1192180 | -0.808799 | 2.592846e-50 | -8.615850e-47 |
| Msa0226450 | Msa1205270 | 0.852303 | 5.041996e-61 | -8.615850e-47 |
| Msa0226450 | Msa1209990 | 0.832020 | 1.199668e-55 | -8.615850e-47 |
| Msa0226450 | Msa1225140 | 0.841200 | 5.487416e-58 | -8.615850e-47 |
| Msa0226450 | Msa1228600 | 0.801565 | 8.480161e-49 | -8.615850e-47 |
| Msa0226450 | Msa1236190 | 0.806104 | 9.670529e-50 | -8.615850e-47 |
| Msa0226450 | Msa1257570 | -0.807262 | 5.509347e-50 | -8.615850e-47 |
| Msa0226450 | Msa1260520 | 0.832332 | 1.004042e-55 | -8.615850e-47 |
| Msa0226450 | Msa1266120 | 0.850472 | 1.660876e-60 | -8.615850e-47 |
| Msa0226450 | Msa1286860 | 0.817002 | 4.133821e-52 | -8.615850e-47 |
| Msa0226450 | Msa1291070 | 0.802001 | 6.901580e-49 | -8.615850e-47 |
| Msa0226450 | Msa1295210 | 0.824582 | 7.466220e-54 | -8.615850e-47 |
| Msa0226450 | Msa1295480 | 0.812066 | 5.110074e-51 | -8.615850e-47 |
| Msa0226450 | Msa1297220 | 0.839759 | 1.307259e-57 | -8.615850e-47 |
| Msa0226450 | Msa1298480 | 0.831648 | 1.481411e-55 | -8.615850e-47 |
| Msa0226450 | Msa1298980 | 0.809862 | 1.534410e-50 | -8.615850e-47 |
| Msa0226450 | Msa1323260 | 0.860011 | 2.779534e-63 | -8.615850e-47 |
| Msa0226450 | Msa1331300 | -0.808615 | 2.838390e-50 | -8.615850e-47 |
| Msa0226450 | Msa1339310 | 0.800270 | 1.559110e-48 | -8.615850e-47 |
| Msa0226450 | Msa1342110 | 0.804750 | 1.859343e-49 | -8.615850e-47 |
| Msa0226450 | Msa1342360 | 0.843960 | 1.016019e-58 | -8.615850e-47 |
| Msa0226450 | Msa1343450 | 0.840562 | 8.071434e-58 | -8.615850e-47 |
| Msa0226450 | Msa1346340 | 0.806109 | 9.648629e-50 | -8.615850e-47 |
| Msa0226450 | Msa1348860 | 0.804595 | 2.003551e-49 | -8.615850e-47 |
| Msa0226450 | Msa1350580 | 0.830114 | 3.523974e-55 | -8.615850e-47 |
| Msa0226450 | Msa1352600 | 0.819326 | 1.231799e-52 | -8.615850e-47 |
| Msa0226450 | Msa1352630 | 0.818843 | 1.585934e-52 | -8.615850e-47 |
| Msa0226450 | Msa1356100 | 0.816342 | 5.809782e-52 | -8.615850e-47 |
| Msa0226450 | Msa1363310 | 0.802250 | 6.132771e-49 | -8.615850e-47 |
| Msa0226450 | Msa1365820 | -0.819034 | 1.435676e-52 | -8.615850e-47 |
| Msa0226450 | Msa1366140 | 0.818760 | 1.656395e-52 | -8.615850e-47 |
| Msa0226450 | Msa1368390 | -0.846132 | 2.631407e-59 | -8.615850e-47 |
| Msa0226450 | Msa1375000 | 0.847431 | 1.161800e-59 | -8.615850e-47 |
| Msa0226450 | Msa1376010 | 0.842354 | 2.721683e-58 | -8.615850e-47 |
| Msa0226450 | Msa1377980 | 0.813420 | 2.582643e-51 | -8.615850e-47 |
| Msa0226450 | Msa1382100 | 0.804036 | 2.619209e-49 | -8.615850e-47 |
| Msa0226450 | Msa1384410 | 0.851518 | 8.426511e-61 | -8.615850e-47 |
| Msa0226450 | Msa1384970 | 0.812872 | 3.406263e-51 | -8.615850e-47 |
| Msa0226450 | Msa1386580 | 0.801020 | 1.096578e-48 | -8.615850e-47 |
| Msa0226450 | Msa1388720 | 0.817618 | 3.003364e-52 | -8.615850e-47 |
| Msa0226450 | Msa1389670 | 0.807260 | 5.512734e-50 | -8.615850e-47 |
| Msa0226450 | Msa1396200 | 0.809093 | 2.243764e-50 | -8.615850e-47 |
| Msa0226450 | Msa1398450 | 0.803580 | 3.257297e-49 | -8.615850e-47 |
| Msa0226450 | Msa1400240 | 0.808488 | 3.021559e-50 | -8.615850e-47 |
| Msa0226450 | Msa1402300 | -0.806215 | 9.163846e-50 | -8.615850e-47 |
| Msa0226450 | Msa1408280 | 0.812651 | 3.808939e-51 | -8.615850e-47 |
| Msa0226450 | Msa1408860 | 0.850916 | 1.246350e-60 | -8.615850e-47 |
| Msa0226450 | Msa1414780 | 0.869291 | 3.456435e-66 | -8.615850e-47 |
| Msa0226450 | Msa1418840 | 0.843193 | 1.628326e-58 | -8.615850e-47 |
| Msa0226450 | Msa1435950 | 0.832506 | 9.092700e-56 | -8.615850e-47 |
| Msa0226450 | Msa1436620 | -0.833461 | 5.263397e-56 | -8.615850e-47 |
| Msa0226450 | Msa1436660 | 0.840491 | 8.424071e-58 | -8.615850e-47 |
| Msa0226450 | Msa1449690 | 0.800151 | 1.648994e-48 | -8.615850e-47 |
| Msa0226450 | Msa1451910 | 0.806923 | 6.498559e-50 | -8.615850e-47 |
| Msa0226450 | Msa1453430 | -0.802649 | 5.074408e-49 | -8.615850e-47 |
| Msa0226450 | Msa1457770 | -0.856858 | 2.421400e-62 | -8.615850e-47 |
| Msa0226450 | Msa1459130 | 0.805755 | 1.145187e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226450 | MtrunA17_Chr2g0332931 | 92.697 | 178 | 13 | 0 | 1 | 178 | 1 | 178 | 2.84e-118 | 332 |
| Msa0226450 | MtrunA17_Chr5g0414241 | 32.075 | 159 | 103 | 4 | 20 | 176 | 41 | 196 | 3.14e-21 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226450 | AT1G52590.1 | 71.264 | 174 | 47 | 3 | 6 | 178 | 1 | 172 | 2.17e-86 | 251 |
| Msa0226450 | AT1G24095.2 | 37.815 | 119 | 69 | 3 | 61 | 176 | 9 | 125 | 2.97e-21 | 85.1 |
| Msa0226450 | AT1G24095.1 | 37.815 | 119 | 69 | 3 | 61 | 176 | 75 | 191 | 5.33e-21 | 86.3 |
Find 37 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTTCCTGCTTGTAATAT+TGG | 0.197241 | 2_1:-76931287 | Msa0226450:CDS |
| GATGAAGCTAATGAAGAAAT+TGG | 0.299889 | 2_1:+76928411 | None:intergenic |
| TTGTACTTGTTGAAAATAAT+AGG | 0.312862 | 2_1:-76929405 | Msa0226450:intron |
| AGCTTCCTGCTTGTAATATT+GGG | 0.322079 | 2_1:-76931286 | Msa0226450:CDS |
| CGACCCATCATGTTATTTGA+TGG | 0.340065 | 2_1:-76931137 | Msa0226450:intron |
| TTGTTTCATTTCAATTTCAA+TGG | 0.375360 | 2_1:-76931330 | Msa0226450:exon |
| CTCGAAGTGATAACGTGAAC+TGG | 0.384250 | 2_1:-76931196 | Msa0226450:CDS |
| AGAGGCTGTGTTGAAGATAA+TGG | 0.394830 | 2_1:-76928891 | Msa0226450:CDS |
| ATAATATCTTCTGTCTCAAA+TGG | 0.423847 | 2_1:-76928465 | Msa0226450:three_prime_UTR |
| TTATTCAACTCGAAGATTTG+TGG | 0.448781 | 2_1:+76928581 | None:intergenic |
| TTTACCATCAAATAACATGA+TGG | 0.459751 | 2_1:+76931133 | None:intergenic |
| CTGAAGAAGAAACGCTAGCT+GGG | 0.464095 | 2_1:+76928847 | None:intergenic |
| TCGATGACTGCAGATTTGTC+AGG | 0.465548 | 2_1:-76928731 | Msa0226450:intron |
| CAGTTCACGTTATCACTTCG+AGG | 0.470003 | 2_1:+76931197 | None:intergenic |
| ACTGAAGAAGAAACGCTAGC+TGG | 0.477344 | 2_1:+76928846 | None:intergenic |
| AAGATGTTACTCAGGAGATC+AGG | 0.488992 | 2_1:-76929454 | Msa0226450:CDS |
| TTTCTTCATTAGCTTCATCA+AGG | 0.494753 | 2_1:-76928407 | Msa0226450:three_prime_UTR |
| ACATGATGGGTCGTTTGTCT+TGG | 0.498630 | 2_1:+76931147 | None:intergenic |
| GAAGCTCTTCAGAGTGAAGC+TGG | 0.523439 | 2_1:-76929478 | Msa0226450:CDS |
| AAGAAACGCTAGCTGGGGAA+AGG | 0.536026 | 2_1:+76928853 | None:intergenic |
| ACAACACTTGAGATATCATC+AGG | 0.536992 | 2_1:+76929424 | None:intergenic |
| TGACAGAGTAGCGAAGGTTG+TGG | 0.554535 | 2_1:+76931223 | None:intergenic |
| TTACCATCAAATAACATGAT+GGG | 0.558391 | 2_1:+76931134 | None:intergenic |
| AGAAACGCTAGCTGGGGAAA+GGG | 0.564077 | 2_1:+76928854 | None:intergenic |
| CGATGACTGCAGATTTGTCA+GGG | 0.572274 | 2_1:-76928730 | Msa0226450:intron |
| TGTGAAATCTAGCATCATCC+TGG | 0.576417 | 2_1:-76928648 | Msa0226450:exon |
| ACGCGCCCAATATTACAAGC+AGG | 0.579281 | 2_1:+76931281 | None:intergenic |
| GTGTGTAACTTGTGTAATGG+TGG | 0.594795 | 2_1:-76931016 | Msa0226450:CDS |
| AAGCTGGCAAGATGTTACTC+AGG | 0.601546 | 2_1:-76929462 | Msa0226450:CDS |
| AGGTTGTGACAGAGTAGCGA+AGG | 0.608840 | 2_1:+76931217 | None:intergenic |
| GGGGTGTGTAACTTGTGTAA+TGG | 0.614565 | 2_1:-76931019 | Msa0226450:CDS |
| AATGAAACAAGAAGCTTGCG+AGG | 0.622348 | 2_1:+76931343 | None:intergenic |
| TGTTGCAAATAATCGTTACA+CGG | 0.624647 | 2_1:-76928691 | Msa0226450:CDS |
| TAGATCATACATAAAGTCAG+AGG | 0.631939 | 2_1:-76928909 | Msa0226450:CDS |
| TCGAAGTGATAACGTGAACT+GGG | 0.641991 | 2_1:-76931195 | Msa0226450:CDS |
| TGAAGAAGAAACGCTAGCTG+GGG | 0.657670 | 2_1:+76928848 | None:intergenic |
| TTATCACTAGTATTCATACC+AGG | 0.681280 | 2_1:+76928630 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAATCTAATAAACAT+TGG | + | chr2_1:76929013-76929032 | None:intergenic | 10.0% |
| !!! | GTTATTTTTCAAATTATTAA+CGG | + | chr2_1:76929955-76929974 | None:intergenic | 10.0% |
| !! | ATAAAACAACATTATAAAAA+TGG | + | chr2_1:76930974-76930993 | None:intergenic | 10.0% |
| !! | TTATGCTTCATATTAAAAAT+TGG | - | chr2_1:76928848-76928867 | Msa0226450:CDS | 15.0% |
| !!! | TTATTTTCTCAAATTATCAT+CGG | - | chr2_1:76929715-76929734 | Msa0226450:intron | 15.0% |
| !! | AAATTCAACAACAAATTATT+TGG | + | chr2_1:76930190-76930209 | None:intergenic | 15.0% |
| !!! | TGTTTTATTCATATTTTGTT+GGG | - | chr2_1:76930232-76930251 | Msa0226450:intron | 15.0% |
| !! | TTGTTTCATTTCAATTTCAA+TGG | - | chr2_1:76928429-76928448 | Msa0226450:three_prime_UTR | 20.0% |
| !! | ATTGAAAATACAAAGAAGAA+GGG | + | chr2_1:76928665-76928684 | None:intergenic | 20.0% |
| !! | TAATATGAAGCATAATCAAA+AGG | + | chr2_1:76928843-76928862 | None:intergenic | 20.0% |
| !!! | ATTTGATTAGTTTACTTAGT+TGG | - | chr2_1:76928935-76928954 | Msa0226450:intron | 20.0% |
| !!! | TTTGTTTTAGGTTTGTTTTA+TGG | - | chr2_1:76928958-76928977 | Msa0226450:intron | 20.0% |
| !!! | CTGTTTTATTCATATTTTGT+TGG | - | chr2_1:76930231-76930250 | Msa0226450:intron | 20.0% |
| !!! | TTGTACTTGTTGAAAATAAT+AGG | - | chr2_1:76930354-76930373 | Msa0226450:intron | 20.0% |
| !! | TAATAACCTATGAAAACAAT+CGG | - | chr2_1:76930705-76930724 | Msa0226450:intron | 20.0% |
| !!! | CTTTATTTTATCTTTGGTTA+TGG | - | chr2_1:76930729-76930748 | Msa0226450:intron | 20.0% |
| !!! | AGGAAATGTAAATTTTATCT+TGG | - | chr2_1:76930812-76930831 | Msa0226450:intron | 20.0% |
| !!! | AAATGTAAATTTTATCTTGG+TGG | - | chr2_1:76930815-76930834 | Msa0226450:intron | 20.0% |
| ! | TTACCATCAAATAACATGAT+GGG | + | chr2_1:76928628-76928647 | None:intergenic | 25.0% |
| ! | TTTACCATCAAATAACATGA+TGG | + | chr2_1:76928629-76928648 | None:intergenic | 25.0% |
| ! | CATTGAAAATACAAAGAAGA+AGG | + | chr2_1:76928666-76928685 | None:intergenic | 25.0% |
| !!! | TTTTGATGATTTTGACATAC+AGG | - | chr2_1:76928719-76928738 | Msa0226450:CDS | 25.0% |
| !!! | TTTGATGATTTTGACATACA+GGG | - | chr2_1:76928720-76928739 | Msa0226450:CDS | 25.0% |
| !!! | TTACTTAGTTGGTTTGTTTT+AGG | - | chr2_1:76928946-76928965 | Msa0226450:intron | 25.0% |
| ! | AAATCTAATAAACATTGGAC+AGG | + | chr2_1:76929008-76929027 | None:intergenic | 25.0% |
| ! | TTTATTTAAACTCGATATCC+CGG | - | chr2_1:76929093-76929112 | Msa0226450:intron | 25.0% |
| ! | AGATTTGATCTTTAATTACG+TGG | - | chr2_1:76929331-76929350 | Msa0226450:intron | 25.0% |
| ! | AAATATATGGGTAACTATGT+AGG | - | chr2_1:76929850-76929869 | Msa0226450:intron | 25.0% |
| ! | TGAAAGAAAATCAAGGTTAA+TGG | + | chr2_1:76930128-76930147 | None:intergenic | 25.0% |
| !! | TTATTCATATTTTGTTGGGA+TGG | - | chr2_1:76930236-76930255 | Msa0226450:intron | 25.0% |
| !! | TATTCATATTTTGTTGGGAT+GGG | - | chr2_1:76930237-76930256 | Msa0226450:intron | 25.0% |
| ! | GTTACTAATCTGAAAATTTC+TGG | + | chr2_1:76930429-76930448 | None:intergenic | 25.0% |
| !!! | ATTGAAATTTTAACAGAACG+AGG | + | chr2_1:76930516-76930535 | None:intergenic | 25.0% |
| !!! | ATCGGACTTTATTTTATCTT+TGG | - | chr2_1:76930723-76930742 | Msa0226450:intron | 25.0% |
| ! | CCTATAAAATATACTTACAG+AGG | + | chr2_1:76930944-76930963 | None:intergenic | 25.0% |
| !! | CCTCTGTAAGTATATTTTAT+AGG | - | chr2_1:76930941-76930960 | Msa0226450:intron | 25.0% |
| ! | CAACATTATAAAAATGGTGA+AGG | + | chr2_1:76930968-76930987 | None:intergenic | 25.0% |
| ! | TTTATTGCTAAAGAGAAACA+AGG | - | chr2_1:76930989-76931008 | Msa0226450:CDS | 25.0% |
| !! | GATATAATCGTTTTACTTGA+TGG | - | chr2_1:76931249-76931268 | Msa0226450:CDS | 25.0% |
| ! | ATAATATCTTCTGTCTCAAA+TGG | - | chr2_1:76931294-76931313 | Msa0226450:CDS | 25.0% |
| !! | TTGATGATTTTGACATACAG+GGG | - | chr2_1:76928721-76928740 | Msa0226450:CDS | 30.0% |
| ! | AAAACCGGTTTATAAAGTCA+GGG | - | chr2_1:76929057-76929076 | Msa0226450:intron | 30.0% |
| CCTCTTAATGTCAATTTGAT+GGG | + | chr2_1:76929207-76929226 | None:intergenic | 30.0% | |
| TCCTCTTAATGTCAATTTGA+TGG | + | chr2_1:76929208-76929227 | None:intergenic | 30.0% | |
| ACATTAAGAGGAATCAAACT+CGG | - | chr2_1:76929216-76929235 | Msa0226450:intron | 30.0% | |
| TCTTTAATTACGTGGAATTG+AGG | - | chr2_1:76929339-76929358 | Msa0226450:intron | 30.0% | |
| !! | CTTGAGAAGAGTTTTTAAAG+AGG | - | chr2_1:76929580-76929599 | Msa0226450:intron | 30.0% |
| ! | AAACTGACTCTTAACTAACT+TGG | - | chr2_1:76929663-76929682 | Msa0226450:intron | 30.0% |
| TAGATGATTGACACAATTCA+TGG | - | chr2_1:76929815-76929834 | Msa0226450:intron | 30.0% | |
| CCAACTCAATGCAAATATAT+GGG | - | chr2_1:76929838-76929857 | Msa0226450:intron | 30.0% | |
| GTTAATGGCATTCAAAAACT+TGG | + | chr2_1:76930113-76930132 | None:intergenic | 30.0% | |
| AACGATGTGAAAGAAAATCA+AGG | + | chr2_1:76930135-76930154 | None:intergenic | 30.0% | |
| ! | ATGGATTACTCTCTTATAAC+AGG | - | chr2_1:76930551-76930570 | Msa0226450:intron | 30.0% |
| TAAGTACTTGTACTACTGTT+TGG | - | chr2_1:76930614-76930633 | Msa0226450:intron | 30.0% | |
| AATCAGCTGAAAACAACTTA+TGG | + | chr2_1:76930670-76930689 | None:intergenic | 30.0% | |
| ! | TAAAGTCCGATTGTTTTCAT+AGG | + | chr2_1:76930714-76930733 | None:intergenic | 30.0% |
| ATTTCCTCTTTACTCACAAA+AGG | + | chr2_1:76930799-76930818 | None:intergenic | 30.0% | |
| ! | TGTAAATTTTATCTTGGTGG+TGG | - | chr2_1:76930818-76930837 | Msa0226450:intron | 30.0% |
| TAGATCATACATAAAGTCAG+AGG | - | chr2_1:76930850-76930869 | Msa0226450:intron | 30.0% | |
| TGTTGCAAATAATCGTTACA+CGG | - | chr2_1:76931068-76931087 | Msa0226450:intron | 30.0% | |
| ! | AATAATCGTTACACGGTTTT+TGG | - | chr2_1:76931075-76931094 | Msa0226450:intron | 30.0% |
| TTATCACTAGTATTCATACC+AGG | + | chr2_1:76931132-76931151 | None:intergenic | 30.0% | |
| TTATTCAACTCGAAGATTTG+TGG | + | chr2_1:76931181-76931200 | None:intergenic | 30.0% | |
| ! | TAATCGTTTTACTTGATGGA+AGG | - | chr2_1:76931253-76931272 | Msa0226450:CDS | 30.0% |
| GATGAAGCTAATGAAGAAAT+TGG | + | chr2_1:76931351-76931370 | None:intergenic | 30.0% | |
| ! | TTTCTTCATTAGCTTCATCA+AGG | - | chr2_1:76931352-76931371 | Msa0226450:five_prime_UTR | 30.0% |
| AGCTTCCTGCTTGTAATATT+GGG | - | chr2_1:76928473-76928492 | Msa0226450:three_prime_UTR | 35.0% | |
| !! | TTTTGTAAAGATGAGTTGGG+TGG | + | chr2_1:76929041-76929060 | None:intergenic | 35.0% |
| !! | CGGTTTTGTAAAGATGAGTT+GGG | + | chr2_1:76929044-76929063 | None:intergenic | 35.0% |
| CCAACTCATCTTTACAAAAC+CGG | - | chr2_1:76929042-76929061 | Msa0226450:intron | 35.0% | |
| ! | CAAAACCGGTTTATAAAGTC+AGG | - | chr2_1:76929056-76929075 | Msa0226450:intron | 35.0% |
| ATTGAACCCCTCAGATTAAT+CGG | + | chr2_1:76929126-76929145 | None:intergenic | 35.0% | |
| !! | TCTATGCTCTGGCTTTAAAT+GGG | + | chr2_1:76929169-76929188 | None:intergenic | 35.0% |
| !! | TTCTATGCTCTGGCTTTAAA+TGG | + | chr2_1:76929170-76929189 | None:intergenic | 35.0% |
| GTTCATTATGTTCTATGCTC+TGG | + | chr2_1:76929180-76929199 | None:intergenic | 35.0% | |
| CCCATCAAATTGACATTAAG+AGG | - | chr2_1:76929204-76929223 | Msa0226450:intron | 35.0% | |
| CATTAAGAGGAATCAAACTC+GGG | - | chr2_1:76929217-76929236 | Msa0226450:intron | 35.0% | |
| CCATCTTAGAAATCGTTGTT+GGG | + | chr2_1:76929420-76929439 | None:intergenic | 35.0% | |
| ACCATCTTAGAAATCGTTGT+TGG | + | chr2_1:76929421-76929440 | None:intergenic | 35.0% | |
| ! | TCTAAGATGGTATCAGAGTT+TGG | - | chr2_1:76929430-76929449 | Msa0226450:CDS | 35.0% |
| TAGTTTCACATCGGATAGAT+AGG | - | chr2_1:76929554-76929573 | Msa0226450:intron | 35.0% | |
| !! | GAGAAGAGTTTTTAAAGAGG+AGG | - | chr2_1:76929583-76929602 | Msa0226450:intron | 35.0% |
| GTAACTCATCCTTACAAAAC+CGG | + | chr2_1:76929627-76929646 | None:intergenic | 35.0% | |
| ! | CAGTTTTTACCGTTAAGAGT+CGG | + | chr2_1:76929649-76929668 | None:intergenic | 35.0% |
| GCCAACTCAATGCAAATATA+TGG | - | chr2_1:76929837-76929856 | Msa0226450:intron | 35.0% | |
| CCCATATATTTGCATTGAGT+TGG | + | chr2_1:76929841-76929860 | None:intergenic | 35.0% | |
| !! | TAGAAGTGTTAGTGCTACAA+AGG | - | chr2_1:76930052-76930071 | Msa0226450:intron | 35.0% |
| GGTTAATTGTGTTCAGAGAA+TGG | + | chr2_1:76930092-76930111 | None:intergenic | 35.0% | |
| GGTTAATGCAATTCAGTTGA+TGG | + | chr2_1:76930169-76930188 | None:intergenic | 35.0% | |
| ACAACACTTGAGATATCATC+AGG | + | chr2_1:76930338-76930357 | None:intergenic | 35.0% | |
| ATTAGTAACCTCTTTCTCCA+GGG | - | chr2_1:76930440-76930459 | Msa0226450:intron | 35.0% | |
| AACAGAACGAGGATTCTAAT+TGG | + | chr2_1:76930505-76930524 | None:intergenic | 35.0% | |
| CAATTATCTTCTCAGCTCAA+TGG | - | chr2_1:76930532-76930551 | Msa0226450:intron | 35.0% | |
| ! | CTTACCTTTTGTGAGTAAAG+AGG | - | chr2_1:76930792-76930811 | Msa0226450:intron | 35.0% |
| AATGAAACAAGAAGCTTGCG+AGG | + | chr2_1:76928419-76928438 | None:intergenic | 40.0% | |
| CAGCTTCCTGCTTGTAATAT+TGG | - | chr2_1:76928472-76928491 | Msa0226450:three_prime_UTR | 40.0% | |
| ! | TCGAAGTGATAACGTGAACT+GGG | - | chr2_1:76928564-76928583 | Msa0226450:three_prime_UTR | 40.0% |
| ! | CGACCCATCATGTTATTTGA+TGG | - | chr2_1:76928622-76928641 | Msa0226450:three_prime_UTR | 40.0% |
| ! | GTGTGTAACTTGTGTAATGG+TGG | - | chr2_1:76928743-76928762 | Msa0226450:intron | 40.0% |
| AGCAACGAAACTTCTGATGA+TGG | - | chr2_1:76928982-76929001 | Msa0226450:intron | 40.0% | |
| !! | CCGGTTTTGTAAAGATGAGT+TGG | + | chr2_1:76929045-76929064 | None:intergenic | 40.0% |
| GACACCCTGACTTTATAAAC+CGG | + | chr2_1:76929064-76929083 | None:intergenic | 40.0% | |
| CCAAACTCCGATTAATCTGA+GGG | - | chr2_1:76929116-76929135 | Msa0226450:intron | 40.0% | |
| CAAACTCCGATTAATCTGAG+GGG | - | chr2_1:76929117-76929136 | Msa0226450:intron | 40.0% | |
| ! | CCCAACAACGATTTCTAAGA+TGG | - | chr2_1:76929417-76929436 | Msa0226450:CDS | 40.0% |
| AGATGGTATCAGAGTTTGGT+TGG | - | chr2_1:76929434-76929453 | Msa0226450:CDS | 40.0% | |
| GATGGTATCAGAGTTTGGTT+GGG | - | chr2_1:76929435-76929454 | Msa0226450:CDS | 40.0% | |
| AACTAAATCCCACCAAGTGT+TGG | + | chr2_1:76929539-76929558 | None:intergenic | 40.0% | |
| ! | GGTGGGATTTAGTTTCACAT+CGG | - | chr2_1:76929545-76929564 | Msa0226450:intron | 40.0% |
| !! | GATGAGTTACCGACTCTTAA+CGG | - | chr2_1:76929637-76929656 | Msa0226450:intron | 40.0% |
| TGGGTAACTATGTAGGTAGA+TGG | - | chr2_1:76929857-76929876 | Msa0226450:intron | 40.0% | |
| ! | TCTGTGTCAGTGTTTTTCAC+AGG | + | chr2_1:76929909-76929928 | None:intergenic | 40.0% |
| GTAATCCCATGTGTAAGTGT+TGG | - | chr2_1:76929985-76930004 | Msa0226450:intron | 40.0% | |
| AGAGTCCAACACTTACACAT+GGG | + | chr2_1:76929993-76930012 | None:intergenic | 40.0% | |
| TGTTGGACTCTGACATGTAT+CGG | - | chr2_1:76930002-76930021 | Msa0226450:intron | 40.0% | |
| AAGATGTTACTCAGGAGATC+AGG | - | chr2_1:76930305-76930324 | Msa0226450:intron | 40.0% | |
| GATTAGTAACCTCTTTCTCC+AGG | - | chr2_1:76930439-76930458 | Msa0226450:intron | 40.0% | |
| AGAGGCTGTGTTGAAGATAA+TGG | - | chr2_1:76930868-76930887 | Msa0226450:intron | 40.0% | |
| TGTGAAATCTAGCATCATCC+TGG | - | chr2_1:76931111-76931130 | Msa0226450:intron | 40.0% | |
| CAGTTCACGTTATCACTTCG+AGG | + | chr2_1:76928565-76928584 | None:intergenic | 45.0% | |
| ! | CTCGAAGTGATAACGTGAAC+TGG | - | chr2_1:76928563-76928582 | Msa0226450:three_prime_UTR | 45.0% |
| !! | ACATGATGGGTCGTTTGTCT+TGG | + | chr2_1:76928615-76928634 | None:intergenic | 45.0% |
| ! | GGGGTGTGTAACTTGTGTAA+TGG | - | chr2_1:76928740-76928759 | Msa0226450:intron | 45.0% |
| AGATTAATCGGAGTTTGGCC+GGG | + | chr2_1:76929114-76929133 | None:intergenic | 45.0% | |
| CAGATTAATCGGAGTTTGGC+CGG | + | chr2_1:76929115-76929134 | None:intergenic | 45.0% | |
| GCCAAACTCCGATTAATCTG+AGG | - | chr2_1:76929115-76929134 | Msa0226450:intron | 45.0% | |
| CCCTCAGATTAATCGGAGTT+TGG | + | chr2_1:76929119-76929138 | None:intergenic | 45.0% | |
| ATCAAACTCGGGACTTTGAG+AGG | - | chr2_1:76929228-76929247 | Msa0226450:intron | 45.0% | |
| ACTACGAGACCAACCCAAAT+GGG | - | chr2_1:76929277-76929296 | Msa0226450:intron | 45.0% | |
| !! | AGACCAACCCAAATGGGTTA+AGG | - | chr2_1:76929283-76929302 | Msa0226450:intron | 45.0% |
| !! | GACCAACCCAAATGGGTTAA+GGG | - | chr2_1:76929284-76929303 | Msa0226450:intron | 45.0% |
| GTGACACCCTTAACCCATTT+GGG | + | chr2_1:76929293-76929312 | None:intergenic | 45.0% | |
| AGTGACACCCTTAACCCATT+TGG | + | chr2_1:76929294-76929313 | None:intergenic | 45.0% | |
| CCACCAAACCAGATAGTGTT+GGG | + | chr2_1:76929387-76929406 | None:intergenic | 45.0% | |
| !! | CCAACACTATCTGGTTTGGT+GGG | - | chr2_1:76929385-76929404 | Msa0226450:intron | 45.0% |
| AGTTTGGTTGGGTCTATCGT+TGG | - | chr2_1:76929446-76929465 | Msa0226450:CDS | 45.0% | |
| GTTTGGTTGGGTCTATCGTT+GGG | - | chr2_1:76929447-76929466 | Msa0226450:CDS | 45.0% | |
| !! | ACGTACAAGCCGGTTTTGTA+AGG | - | chr2_1:76929615-76929634 | Msa0226450:intron | 45.0% |
| ACTGACACAGACACGAATAC+CGG | - | chr2_1:76929918-76929937 | Msa0226450:intron | 45.0% | |
| CAGAGTCCAACACTTACACA+TGG | + | chr2_1:76929994-76930013 | None:intergenic | 45.0% | |
| ATTCCAATAGAAGCCGTGTC+CGG | + | chr2_1:76930031-76930050 | None:intergenic | 45.0% | |
| ! | TTTGTTGGGATGGGTTTGAC+AGG | - | chr2_1:76930246-76930265 | Msa0226450:intron | 45.0% |
| AAGCTGGCAAGATGTTACTC+AGG | - | chr2_1:76930297-76930316 | Msa0226450:intron | 45.0% | |
| AACCTTAATCTCCTAGTCCC+TGG | + | chr2_1:76930460-76930479 | None:intergenic | 45.0% | |
| TGAAGAAGAAACGCTAGCTG+GGG | + | chr2_1:76930914-76930933 | None:intergenic | 45.0% | |
| CTGAAGAAGAAACGCTAGCT+GGG | + | chr2_1:76930915-76930934 | None:intergenic | 45.0% | |
| ACTGAAGAAGAAACGCTAGC+TGG | + | chr2_1:76930916-76930935 | None:intergenic | 45.0% | |
| TCGATGACTGCAGATTTGTC+AGG | - | chr2_1:76931028-76931047 | Msa0226450:intron | 45.0% | |
| CGATGACTGCAGATTTGTCA+GGG | - | chr2_1:76931029-76931048 | Msa0226450:intron | 45.0% | |
| ACGCGCCCAATATTACAAGC+AGG | + | chr2_1:76928481-76928500 | None:intergenic | 50.0% | |
| TGACAGAGTAGCGAAGGTTG+TGG | + | chr2_1:76928539-76928558 | None:intergenic | 50.0% | |
| AGGTTGTGACAGAGTAGCGA+AGG | + | chr2_1:76928545-76928564 | None:intergenic | 50.0% | |
| TCAATCCCACCGTCCACTTA+CGG | - | chr2_1:76929141-76929160 | Msa0226450:intron | 50.0% | |
| CTTTAAATGGGCCCCGTAAG+TGG | + | chr2_1:76929157-76929176 | None:intergenic | 50.0% | |
| ! | TTTGAGAGGAGCACACTCCA+AGG | - | chr2_1:76929242-76929261 | Msa0226450:intron | 50.0% |
| !! | GTAGTGTTGGCTTGAGACCT+TGG | + | chr2_1:76929262-76929281 | None:intergenic | 50.0% |
| !! | TTGGGTTGGTCTCGTAGTGT+TGG | + | chr2_1:76929275-76929294 | None:intergenic | 50.0% |
| CACTACGAGACCAACCCAAA+TGG | - | chr2_1:76929276-76929295 | Msa0226450:intron | 50.0% | |
| CACCCTTAACCCATTTGGGT+TGG | + | chr2_1:76929289-76929308 | None:intergenic | 50.0% | |
| ! | ACCAGATAGTGTTGGGCGTA+GGG | + | chr2_1:76929380-76929399 | None:intergenic | 50.0% |
| ! | AACCAGATAGTGTTGGGCGT+AGG | + | chr2_1:76929381-76929400 | None:intergenic | 50.0% |
| ACGCCCAACACTATCTGGTT+TGG | - | chr2_1:76929381-76929400 | Msa0226450:intron | 50.0% | |
| !! | CCCAACACTATCTGGTTTGG+TGG | - | chr2_1:76929384-76929403 | Msa0226450:intron | 50.0% |
| CCCACCAAACCAGATAGTGT+TGG | + | chr2_1:76929388-76929407 | None:intergenic | 50.0% | |
| !! | TCTGGTTTGGTGGGTGTGTT+AGG | - | chr2_1:76929394-76929413 | Msa0226450:intron | 50.0% |
| GTGTGTTAGCAGCCAACACT+TGG | - | chr2_1:76929524-76929543 | Msa0226450:intron | 50.0% | |
| TGTTAGCAGCCAACACTTGG+TGG | - | chr2_1:76929527-76929546 | Msa0226450:intron | 50.0% | |
| GTTAGCAGCCAACACTTGGT+GGG | - | chr2_1:76929528-76929547 | Msa0226450:intron | 50.0% | |
| !! | CAAAACCGGCTTGTACGTTG+AGG | + | chr2_1:76929613-76929632 | None:intergenic | 50.0% |
| !! | ATTAACGGTGTCGACGTGTC+CGG | + | chr2_1:76929940-76929959 | None:intergenic | 50.0% |
| CTCTGACATGTATCGGACAC+CGG | - | chr2_1:76930009-76930028 | Msa0226450:intron | 50.0% | |
| GAAGCTCTTCAGAGTGAAGC+TGG | - | chr2_1:76930281-76930300 | Msa0226450:intron | 50.0% | |
| AACCTCTTTCTCCAGGGACT+AGG | - | chr2_1:76930446-76930465 | Msa0226450:intron | 50.0% | |
| CTCCAGGGACTAGGAGATTA+AGG | - | chr2_1:76930455-76930474 | Msa0226450:intron | 50.0% | |
| AGAAACGCTAGCTGGGGAAA+GGG | + | chr2_1:76930908-76930927 | None:intergenic | 50.0% | |
| AAGAAACGCTAGCTGGGGAA+AGG | + | chr2_1:76930909-76930928 | None:intergenic | 50.0% | |
| ! | TGGCTTTTCGTGCACGTGGT+GGG | + | chr2_1:76928519-76928538 | None:intergenic | 55.0% |
| ! | GTTGTGGCTTTTCGTGCACG+TGG | + | chr2_1:76928523-76928542 | None:intergenic | 55.0% |
| CAATCCCACCGTCCACTTAC+GGG | - | chr2_1:76929142-76929161 | Msa0226450:intron | 55.0% | |
| AATCCCACCGTCCACTTACG+GGG | - | chr2_1:76929143-76929162 | Msa0226450:intron | 55.0% | |
| AAATGGGCCCCGTAAGTGGA+CGG | + | chr2_1:76929153-76929172 | None:intergenic | 55.0% | |
| ! | GTTGGGCGTAGGGGTGTATT+GGG | + | chr2_1:76929370-76929389 | None:intergenic | 55.0% |
| ! | TGTTGGGCGTAGGGGTGTAT+TGG | + | chr2_1:76929371-76929390 | None:intergenic | 55.0% |
| ! | CCAGATAGTGTTGGGCGTAG+GGG | + | chr2_1:76929379-76929398 | None:intergenic | 55.0% |
| TCCTGCATCGTCCACGTTTC+AGG | - | chr2_1:76929472-76929491 | Msa0226450:CDS | 55.0% | |
| GTCCACGTTTCAGGCCCATT+GGG | - | chr2_1:76929481-76929500 | Msa0226450:CDS | 55.0% | |
| GCACTCCTCAACGTACAAGC+CGG | - | chr2_1:76929605-76929624 | Msa0226450:intron | 55.0% | |
| CATGTATCGGACACCGGACA+CGG | - | chr2_1:76930015-76930034 | Msa0226450:intron | 55.0% | |
| ACACCGGACACGGCTTCTAT+TGG | - | chr2_1:76930025-76930044 | Msa0226450:intron | 55.0% | |
| CTCCTAGTCCCTGGAGAAAG+AGG | + | chr2_1:76930451-76930470 | None:intergenic | 55.0% | |
| ! | GTGGCTTTTCGTGCACGTGG+TGG | + | chr2_1:76928520-76928539 | None:intergenic | 60.0% |
| CCCCTACGCCCAACACTATC+TGG | - | chr2_1:76929376-76929395 | Msa0226450:intron | 60.0% | |
| GCCTGAAACGTGGACGATGC+AGG | + | chr2_1:76929476-76929495 | None:intergenic | 60.0% | |
| CGTCCACGTTTCAGGCCCAT+TGG | - | chr2_1:76929480-76929499 | Msa0226450:CDS | 60.0% | |
| ACGCTTCAGCCTGGCCCAAT+GGG | + | chr2_1:76929498-76929517 | None:intergenic | 60.0% | |
| GGCCCAATGGGCCTGAAACG+TGG | + | chr2_1:76929486-76929505 | None:intergenic | 65.0% | |
| CGTTTCAGGCCCATTGGGCC+AGG | - | chr2_1:76929486-76929505 | Msa0226450:CDS | 65.0% | |
| CACGCTTCAGCCTGGCCCAA+TGG | + | chr2_1:76929499-76929518 | None:intergenic | 65.0% | |
| GGCCAGGCTGAAGCGTGAGA+GGG | - | chr2_1:76929502-76929521 | Msa0226450:intron | 65.0% | |
| CACCCTCTCACGCTTCAGCC+TGG | + | chr2_1:76929507-76929526 | None:intergenic | 65.0% | |
| GGGCCCCGTAAGTGGACGGT+GGG | + | chr2_1:76929149-76929168 | None:intergenic | 70.0% | |
| TGGGCCCCGTAAGTGGACGG+TGG | + | chr2_1:76929150-76929169 | None:intergenic | 70.0% | |
| GGGCCAGGCTGAAGCGTGAG+AGG | - | chr2_1:76929501-76929520 | Msa0226450:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 76928384 | 76931397 | 76928384 | ID=Msa0226450;Name=Msa0226450 |
| chr2_1 | mRNA | 76928384 | 76931397 | 76928384 | ID=Msa0226450-mRNA-1;Parent=Msa0226450;Name=Msa0226450-mRNA-1;_AED=0.01;_eAED=0.01;_QI=64|1|1|1|1|1|5|275|178 |
| chr2_1 | exon | 76928384 | 76928740 | 76928384 | ID=Msa0226450-mRNA-1:exon:23298;Parent=Msa0226450-mRNA-1 |
| chr2_1 | exon | 76928836 | 76928928 | 76928836 | ID=Msa0226450-mRNA-1:exon:23297;Parent=Msa0226450-mRNA-1 |
| chr2_1 | exon | 76929406 | 76929513 | 76929406 | ID=Msa0226450-mRNA-1:exon:23296;Parent=Msa0226450-mRNA-1 |
| chr2_1 | exon | 76930983 | 76931040 | 76930983 | ID=Msa0226450-mRNA-1:exon:23295;Parent=Msa0226450-mRNA-1 |
| chr2_1 | exon | 76931138 | 76931397 | 76931138 | ID=Msa0226450-mRNA-1:exon:23294;Parent=Msa0226450-mRNA-1 |
| chr2_1 | five_prime_UTR | 76931334 | 76931397 | 76931334 | ID=Msa0226450-mRNA-1:five_prime_utr;Parent=Msa0226450-mRNA-1 |
| chr2_1 | CDS | 76931138 | 76931333 | 76931138 | ID=Msa0226450-mRNA-1:cds;Parent=Msa0226450-mRNA-1 |
| chr2_1 | CDS | 76930983 | 76931040 | 76930983 | ID=Msa0226450-mRNA-1:cds;Parent=Msa0226450-mRNA-1 |
| chr2_1 | CDS | 76929406 | 76929513 | 76929406 | ID=Msa0226450-mRNA-1:cds;Parent=Msa0226450-mRNA-1 |
| chr2_1 | CDS | 76928836 | 76928928 | 76928836 | ID=Msa0226450-mRNA-1:cds;Parent=Msa0226450-mRNA-1 |
| chr2_1 | CDS | 76928659 | 76928740 | 76928659 | ID=Msa0226450-mRNA-1:cds;Parent=Msa0226450-mRNA-1 |
| chr2_1 | three_prime_UTR | 76928384 | 76928658 | 76928384 | ID=Msa0226450-mRNA-1:three_prime_utr;Parent=Msa0226450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
