Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514470 | XP_024635282.1 | 93.834 | 373 | 22 | 1 | 1 | 373 | 1 | 372 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514470 | sp|Q5XV40|LAZY1_ARATH | 33.590 | 390 | 207 | 15 | 3 | 373 | 2 | 358 | 9.82e-41 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514470 | G7JC25 | 93.531 | 371 | 23 | 1 | 3 | 373 | 2 | 371 | 0.0 | 683 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014570 | Msa0514470 | 0.811600 | 6.455999e-51 | -8.615850e-47 |
| Msa0039570 | Msa0514470 | 0.819221 | 1.301472e-52 | -8.615850e-47 |
| Msa0054820 | Msa0514470 | 0.810022 | 1.417007e-50 | -8.615850e-47 |
| Msa0056450 | Msa0514470 | 0.813412 | 2.593001e-51 | -8.615850e-47 |
| Msa0065680 | Msa0514470 | -0.802940 | 4.419055e-49 | -8.615850e-47 |
| Msa0100160 | Msa0514470 | 0.805883 | 1.076668e-49 | -8.615850e-47 |
| Msa0106620 | Msa0514470 | 0.803254 | 3.806308e-49 | -8.615850e-47 |
| Msa0154440 | Msa0514470 | 0.803194 | 3.915378e-49 | -8.615850e-47 |
| Msa0178510 | Msa0514470 | 0.813245 | 2.822731e-51 | -8.615850e-47 |
| Msa0187030 | Msa0514470 | 0.820970 | 5.176858e-53 | -8.615850e-47 |
| Msa0187830 | Msa0514470 | 0.803201 | 3.903629e-49 | -8.615850e-47 |
| Msa0191890 | Msa0514470 | 0.813841 | 2.086588e-51 | -8.615850e-47 |
| Msa0230370 | Msa0514470 | 0.803222 | 3.864640e-49 | -8.615850e-47 |
| Msa0422020 | Msa0514470 | 0.892369 | 1.691892e-74 | -8.615850e-47 |
| Msa0432160 | Msa0514470 | 0.810381 | 1.185798e-50 | -8.615850e-47 |
| Msa0468250 | Msa0514470 | 0.802612 | 5.164521e-49 | -8.615850e-47 |
| Msa0468590 | Msa0514470 | 0.950550 | 1.305317e-108 | -8.615850e-47 |
| Msa0476680 | Msa0514470 | 0.804097 | 2.543320e-49 | -8.615850e-47 |
| Msa0277420 | Msa0514470 | 0.834944 | 2.236332e-56 | -8.615850e-47 |
| Msa0312530 | Msa0514470 | 0.828915 | 6.895319e-55 | -8.615850e-47 |
| Msa0347990 | Msa0514470 | 0.801293 | 9.640794e-49 | -8.615850e-47 |
| Msa0514470 | Msa0521010 | 0.801222 | 9.970049e-49 | -8.615850e-47 |
| Msa0514470 | Msa0559500 | 0.820659 | 6.103450e-53 | -8.615850e-47 |
| Msa0514470 | Msa0579660 | 0.821723 | 3.470137e-53 | -8.615850e-47 |
| Msa0514470 | Msa0613710 | 0.821139 | 4.731477e-53 | -8.615850e-47 |
| Msa0514470 | Msa0616550 | 0.805365 | 1.383065e-49 | -8.615850e-47 |
| Msa0514470 | Msa0661320 | 0.809447 | 1.883758e-50 | -8.615850e-47 |
| Msa0514470 | Msa0689760 | 0.810898 | 9.167120e-51 | -8.615850e-47 |
| Msa0514470 | Msa0716860 | 0.801200 | 1.007127e-48 | -8.615850e-47 |
| Msa0514470 | Msa0750250 | 0.811327 | 7.399240e-51 | -8.615850e-47 |
| Msa0514470 | Msa0751260 | 0.810638 | 1.043399e-50 | -8.615850e-47 |
| Msa0514470 | Msa0756380 | 0.804125 | 2.510496e-49 | -8.615850e-47 |
| Msa0514470 | Msa0757800 | 0.828631 | 8.077252e-55 | -8.615850e-47 |
| Msa0514470 | Msa0784480 | 0.805939 | 1.047962e-49 | -8.615850e-47 |
| Msa0514470 | Msa0795070 | 0.808655 | 2.783765e-50 | -8.615850e-47 |
| Msa0514470 | Msa0811130 | 0.800307 | 1.532239e-48 | -8.615850e-47 |
| Msa0514470 | Msa0868160 | 0.808514 | 2.983069e-50 | -8.615850e-47 |
| Msa0514470 | Msa0936390 | 0.810796 | 9.645907e-51 | -8.615850e-47 |
| Msa0514470 | Msa0986510 | 0.800054 | 1.725066e-48 | -8.615850e-47 |
| Msa0514470 | Msa1034500 | 0.813480 | 2.505137e-51 | -8.615850e-47 |
| Msa0514470 | Msa1079430 | 0.801947 | 7.079351e-49 | -8.615850e-47 |
| Msa0514470 | Msa1168550 | 0.813885 | 2.041023e-51 | -8.615850e-47 |
| Msa0514470 | Msa1168590 | 0.809856 | 1.538897e-50 | -8.615850e-47 |
| Msa0514470 | Msa1269890 | 0.803341 | 3.651601e-49 | -8.615850e-47 |
| Msa0514470 | Msa1368430 | 0.807090 | 5.988867e-50 | -8.615850e-47 |
| Msa0514470 | Msa1372150 | 0.803330 | 3.669955e-49 | -8.615850e-47 |
| Msa0514470 | Msa1379590 | 0.819806 | 9.573446e-53 | -8.615850e-47 |
| Msa0514470 | Msa1383230 | 0.816512 | 5.323195e-52 | -8.615850e-47 |
| Msa0514470 | Msa1401270 | 0.813709 | 2.230830e-51 | -8.615850e-47 |
| Msa0514470 | Msa1420250 | 0.808659 | 2.778589e-50 | -8.615850e-47 |
| Msa0514470 | Msa1424640 | 0.821137 | 4.737814e-53 | -8.615850e-47 |
| Msa0514470 | Msa1450060 | 0.891084 | 5.483823e-74 | -8.615850e-47 |
| Msa0514470 | Msa1464050 | 0.846686 | 1.858243e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514470 | MtrunA17_Chr3g0122881 | 93.531 | 371 | 23 | 1 | 3 | 373 | 2 | 371 | 0.0 | 683 |
| Msa0514470 | MtrunA17_Chr7g0222391 | 44.048 | 420 | 146 | 20 | 4 | 373 | 3 | 383 | 1.20e-81 | 254 |
| Msa0514470 | MtrunA17_Chr7g0224731 | 35.825 | 388 | 185 | 13 | 3 | 373 | 2 | 342 | 9.88e-51 | 173 |
| Msa0514470 | MtrunA17_Chr7g0224671 | 30.581 | 327 | 149 | 13 | 1 | 302 | 17 | 290 | 1.25e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514470 | AT5G14090.1 | 33.590 | 390 | 207 | 15 | 3 | 373 | 2 | 358 | 9.99e-42 | 150 |
| Msa0514470 | AT5G14090.2 | 34.630 | 257 | 140 | 9 | 3 | 246 | 2 | 243 | 2.07e-27 | 110 |
Find 110 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAAATAAGATTCGGTTTA+TGG | 0.065232 | 3_4:+65182390 | Msa0514470:three_prime_UTR |
| GAGATGCATGGCAGATTTAT+TGG | 0.247230 | 3_4:-65181158 | None:intergenic |
| TGCCACCGCCAAGGGTAATT+TGG | 0.255351 | 3_4:-65181817 | None:intergenic |
| CTTATTCTTTGACACTGATA+TGG | 0.261165 | 3_4:-65181017 | None:intergenic |
| CCACTTCAGGGATATCTCTT+TGG | 0.265174 | 3_4:+65180959 | Msa0514470:CDS |
| CATATCAGTGTCAAAGAATA+AGG | 0.288207 | 3_4:+65181018 | Msa0514470:CDS |
| AGGCAAAGGGCGAACGGAAT+TGG | 0.300171 | 3_4:+65182100 | Msa0514470:three_prime_UTR |
| AAGACTATGCAATGCAATAA+TGG | 0.301066 | 3_4:+65182172 | Msa0514470:three_prime_UTR |
| TGAAGATTCATCTGAGAATA+TGG | 0.319257 | 3_4:+65181841 | Msa0514470:CDS |
| CTTAGTGTTGGAGCTCTAAA+AGG | 0.331716 | 3_4:+65182080 | Msa0514470:exon |
| GTTAAGAGTCTGTCCGGATA+TGG | 0.336650 | 3_4:+65182286 | Msa0514470:three_prime_UTR |
| TTCTCTCTGCGGTGCTTACA+TGG | 0.339766 | 3_4:-65180895 | None:intergenic |
| GAACTTTCCGGTGAAATATC+TGG | 0.341905 | 3_4:-65181634 | None:intergenic |
| TGTCTTTAGTTAATTATTTG+AGG | 0.346140 | 3_4:+65182248 | Msa0514470:three_prime_UTR |
| AGACAGAAAACTGCATAATA+AGG | 0.354735 | 3_4:+65181252 | Msa0514470:CDS |
| CTTAATTTGCAGCAGTTACT+TGG | 0.355697 | 3_4:+65179938 | Msa0514470:intron |
| GGATGATACTGACAATAAAA+AGG | 0.366676 | 3_4:+65181129 | Msa0514470:CDS |
| AAACTCCATTTGTCCACTTC+AGG | 0.368249 | 3_4:+65180946 | Msa0514470:CDS |
| TTCCTAGCAATTGGAACTCT+TGG | 0.378228 | 3_4:+65180701 | Msa0514470:CDS |
| AGCAATTGGAACTCTTGGTT+TGG | 0.393170 | 3_4:+65180706 | Msa0514470:CDS |
| CACTATCTGAAACCGAACTT+TGG | 0.396952 | 3_4:+65180548 | Msa0514470:CDS |
| GATCAGCTTCAGCTCATTCT+CGG | 0.397412 | 3_4:-65180807 | None:intergenic |
| AATGCTGGTCCCAACACTAA+TGG | 0.397418 | 3_4:+65176780 | None:intergenic |
| TTCCCCGGCTTCCTAGCAAT+TGG | 0.406570 | 3_4:+65180692 | Msa0514470:CDS |
| GGCAAAGGGCGAACGGAATT+GGG | 0.408082 | 3_4:+65182101 | Msa0514470:three_prime_UTR |
| GAGAAGCAAACAAGCAGATC+AGG | 0.413070 | 3_4:+65181087 | Msa0514470:CDS |
| AAATTGAATCAACAGAGGTC+TGG | 0.415660 | 3_4:-65181225 | None:intergenic |
| GAAACAATTAAAATAAGATT+CGG | 0.422974 | 3_4:+65182383 | Msa0514470:three_prime_UTR |
| TGGAACTCTTGGTTTGGAAT+CGG | 0.430619 | 3_4:+65180712 | Msa0514470:CDS |
| ATGTATAATGTTCAAGAGTA+AGG | 0.431130 | 3_4:+65182425 | Msa0514470:three_prime_UTR |
| ACTATCTGAAACCGAACTTT+GGG | 0.435339 | 3_4:+65180549 | Msa0514470:CDS |
| AGACTATGCAATGCAATAAT+GGG | 0.436065 | 3_4:+65182173 | Msa0514470:three_prime_UTR |
| ATGCTGGTCCCAACACTAAT+GGG | 0.440075 | 3_4:+65176781 | None:intergenic |
| GCAGATCAGGACAATCTTGT+TGG | 0.449301 | 3_4:+65181100 | Msa0514470:CDS |
| AACTCCATTTGTCCACTTCA+GGG | 0.453747 | 3_4:+65180947 | Msa0514470:CDS |
| GAAGAAGAAAAGAATGAATG+AGG | 0.455837 | 3_4:+65181691 | Msa0514470:CDS |
| GCTCACCCAGTGTTGTTCTC+TGG | 0.456925 | 3_4:-65181057 | None:intergenic |
| AATGATGGTGTTAGTGGTGA+TGG | 0.457780 | 3_4:-65180737 | None:intergenic |
| GTTCCAATTGCTAGGAAGCC+GGG | 0.462497 | 3_4:-65180695 | None:intergenic |
| AGAAAATCTTTCGAAGCAGT+TGG | 0.467282 | 3_4:+65180617 | Msa0514470:CDS |
| TGAGAATATAATAACTGAAA+AGG | 0.468108 | 3_4:+65180772 | Msa0514470:CDS |
| AACAACAATGATGATTCATC+TGG | 0.470245 | 3_4:+65180863 | Msa0514470:CDS |
| GAAAATCTTTCGAAGCAGTT+GGG | 0.473047 | 3_4:+65180618 | Msa0514470:CDS |
| AATTGAATCAACAGAGGTCT+GGG | 0.476593 | 3_4:-65181224 | None:intergenic |
| AGATGAATCATCATTGTTGT+TGG | 0.478539 | 3_4:-65180861 | None:intergenic |
| ATGGAAAATGATGGTGTTAG+TGG | 0.481586 | 3_4:-65180743 | None:intergenic |
| AACTGACTCCCATTAGTGTT+GGG | 0.488895 | 3_4:-65176789 | None:intergenic |
| TAAGCAAGTGAATGTAAAGA+AGG | 0.489282 | 3_4:+65182361 | Msa0514470:three_prime_UTR |
| ATATCCCTGAAGTGGACAAA+TGG | 0.494244 | 3_4:-65180951 | None:intergenic |
| AACTAAAGACACAAAACATA+AGG | 0.499571 | 3_4:-65182236 | None:intergenic |
| TCATATTAATTTGATGCTCG+TGG | 0.500786 | 3_4:-65182130 | None:intergenic |
| AAGAGTGTTAAGAGTCTGTC+CGG | 0.508459 | 3_4:+65182280 | Msa0514470:three_prime_UTR |
| TTAAATTGCAGACTTAGTGT+TGG | 0.509625 | 3_4:+65182068 | Msa0514470:intron |
| CATCCTTGTGAAACCATATC+CGG | 0.509628 | 3_4:-65182299 | None:intergenic |
| GGAAGAAGATAAGGAGGCAT+GGG | 0.511093 | 3_4:+65180661 | Msa0514470:CDS |
| CTTTCAGTTCTATACACTGT+GGG | 0.515729 | 3_4:+65182486 | Msa0514470:three_prime_UTR |
| ATTTGCAGCAGTTACTTGGA+TGG | 0.516221 | 3_4:+65179942 | Msa0514470:intron |
| AAGAAGAAAAGAATGAATGA+GGG | 0.517369 | 3_4:+65181692 | Msa0514470:CDS |
| AGTAGACGAGGAAGAAGATA+AGG | 0.519096 | 3_4:+65180652 | Msa0514470:CDS |
| AGTTCCAATTGCTAGGAAGC+CGG | 0.522924 | 3_4:-65180696 | None:intergenic |
| CAAAAGTAACAAAGTTGAAG+AGG | 0.524580 | 3_4:+65181724 | Msa0514470:CDS |
| AGAGGTCTGGGAAGAAGCAT+GGG | 0.527489 | 3_4:-65181212 | None:intergenic |
| CAGAGGTCTGGGAAGAAGCA+TGG | 0.527966 | 3_4:-65181213 | None:intergenic |
| CAACTCCAAATTACCCTTGG+CGG | 0.530405 | 3_4:+65181812 | Msa0514470:CDS |
| CACTGAACCTTTCAAAGACC+TGG | 0.535667 | 3_4:+65179991 | Msa0514470:CDS |
| ATCTTCACTGCCACCGCCAA+GGG | 0.536347 | 3_4:-65181825 | None:intergenic |
| TATGAAAGATATGATCGTCA+TGG | 0.538059 | 3_4:+65182148 | Msa0514470:three_prime_UTR |
| TATTATATTCTCAACAGAGA+TGG | 0.542260 | 3_4:-65180762 | None:intergenic |
| GGACAATCTTGTTGGAGCAA+AGG | 0.550435 | 3_4:+65181108 | Msa0514470:CDS |
| TCTTTCGAAGCAGTTGGGAG+TGG | 0.552062 | 3_4:+65180623 | Msa0514470:CDS |
| CCAGCGACCAGGTCTTTGAA+AGG | 0.556891 | 3_4:-65179998 | None:intergenic |
| CCTTTCAAAGACCTGGTCGC+TGG | 0.558214 | 3_4:+65179998 | Msa0514470:CDS |
| AATCTTCACTGCCACCGCCA+AGG | 0.558247 | 3_4:-65181826 | None:intergenic |
| AAACTGACTCCCATTAGTGT+TGG | 0.558780 | 3_4:-65176790 | None:intergenic |
| TCGTACTTCTCTGCACATGT+TGG | 0.562643 | 3_4:-65181668 | None:intergenic |
| ATGAAAGATATGATCGTCAT+GGG | 0.567897 | 3_4:+65182149 | Msa0514470:three_prime_UTR |
| AGGAAGAAGATAAGGAGGCA+TGG | 0.571385 | 3_4:+65180660 | Msa0514470:CDS |
| CTCCAAATTACCCTTGGCGG+TGG | 0.573132 | 3_4:+65181815 | Msa0514470:CDS |
| CCAAAGAGATATCCCTGAAG+TGG | 0.575875 | 3_4:-65180959 | None:intergenic |
| AAAATAGCTTACCAGCGACC+AGG | 0.581021 | 3_4:-65180009 | None:intergenic |
| GAAGATAAGGAGGCATGGGG+TGG | 0.581558 | 3_4:+65180665 | Msa0514470:CDS |
| AGATTCTCCAGATATTTCAC+CGG | 0.584446 | 3_4:+65181627 | Msa0514470:intron |
| TCAACAGAGATGGAAAATGA+TGG | 0.585903 | 3_4:-65180752 | None:intergenic |
| AGGCAACTCCAAATTACCCT+TGG | 0.588508 | 3_4:+65181809 | Msa0514470:CDS |
| TTGGAGCTCTAAAAGGCAAA+GGG | 0.588657 | 3_4:+65182087 | Msa0514470:exon |
| ATAACACTATCAAAGAATGA+AGG | 0.592308 | 3_4:+65179824 | Msa0514470:exon |
| TCTAAAAGGCAAAGGGCGAA+CGG | 0.593553 | 3_4:+65182094 | Msa0514470:exon |
| GCAGTTGGAAAGGAAAACAT+AGG | 0.595191 | 3_4:+65181773 | Msa0514470:CDS |
| CACAGCCAGAGAACAACACT+GGG | 0.596125 | 3_4:+65181052 | Msa0514470:CDS |
| GTTGGAGCTCTAAAAGGCAA+AGG | 0.599355 | 3_4:+65182086 | Msa0514470:exon |
| ACACAGCCAGAGAACAACAC+TGG | 0.600693 | 3_4:+65181051 | Msa0514470:CDS |
| AGACGAGGAAGAAGATAAGG+AGG | 0.605480 | 3_4:+65180655 | Msa0514470:CDS |
| GATGGATGCATAGAAAACTT+CGG | 0.607420 | 3_4:+65179960 | Msa0514470:CDS |
| CTGAAACCGAACTTTGGGAG+CGG | 0.608233 | 3_4:+65180554 | Msa0514470:CDS |
| CATCTGAGAATATGGAGCAG+TGG | 0.617126 | 3_4:+65181849 | Msa0514470:CDS |
| GCAGGCAACATCAGTTGATG+AGG | 0.617201 | 3_4:+65180511 | Msa0514470:CDS |
| AACCAAGAGTTCCAATTGCT+AGG | 0.618323 | 3_4:-65180703 | None:intergenic |
| TTCCAATTGCTAGGAAGCCG+GGG | 0.628342 | 3_4:-65180694 | None:intergenic |
| GCAGTGGATCAAAACAGATG+TGG | 0.633740 | 3_4:+65181865 | Msa0514470:CDS |
| ACATAGGACAGTGCAAGAAG+AGG | 0.639282 | 3_4:+65181789 | Msa0514470:CDS |
| TGTTTCTGATAATTCAACTG+CGG | 0.657633 | 3_4:-65180984 | None:intergenic |
| GAGTGGTAGAGCAGTAGACG+AGG | 0.660218 | 3_4:+65180640 | Msa0514470:CDS |
| TCCATGACTATTTCTCTCTG+CGG | 0.668096 | 3_4:-65180906 | None:intergenic |
| AAGAAAAGAATGAATGAGGG+AGG | 0.670784 | 3_4:+65181695 | Msa0514470:CDS |
| TGCTGAAATTGAATCAACAG+AGG | 0.671518 | 3_4:-65181230 | None:intergenic |
| ACTTTCAGTTCTATACACTG+TGG | 0.672237 | 3_4:+65182485 | Msa0514470:three_prime_UTR |
| TGTCCGGATATGGTTTCACA+AGG | 0.673692 | 3_4:+65182296 | Msa0514470:three_prime_UTR |
| ACCGCAGAGAGAAATAGTCA+TGG | 0.693609 | 3_4:+65180905 | Msa0514470:CDS |
| GAGGTCTGGGAAGAAGCATG+GGG | 0.705384 | 3_4:-65181211 | None:intergenic |
| GAAGAAGATAAGGAGGCATG+GGG | 0.707091 | 3_4:+65180662 | Msa0514470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAGGTAAAAAAAAAAAAA+AGG | + | chr3_4:65178022-65178041 | Msa0514470:intron | 10.0% |
| !! | TTAAAAATCAAAAGAAAAAA+GGG | - | chr3_4:65178822-65178841 | None:intergenic | 10.0% |
| !! | ATTAAAAATCAAAAGAAAAA+AGG | - | chr3_4:65178823-65178842 | None:intergenic | 10.0% |
| !! | AATATATATTATCTTCTTAA+TGG | - | chr3_4:65180297-65180316 | None:intergenic | 10.0% |
| !! | ATTTCTACTATTATACAAAT+AGG | - | chr3_4:65177328-65177347 | None:intergenic | 15.0% |
| !! | TATAATAGTAGAAATATAGT+TGG | + | chr3_4:65177333-65177352 | Msa0514470:intron | 15.0% |
| !! | TCTTAAAATATTTGAAAGAA+GGG | - | chr3_4:65177432-65177451 | None:intergenic | 15.0% |
| !! | ATCTTAAAATATTTGAAAGA+AGG | - | chr3_4:65177433-65177452 | None:intergenic | 15.0% |
| !! | ATAACTTATACTTACAAAAT+CGG | - | chr3_4:65177796-65177815 | None:intergenic | 15.0% |
| !! | AAATCATTTATGTTATCTAT+TGG | - | chr3_4:65178161-65178180 | None:intergenic | 15.0% |
| !! | ATAGATAACATAAATGATTT+AGG | + | chr3_4:65178161-65178180 | Msa0514470:intron | 15.0% |
| !!! | TTTTTTATAATTTGTTAGGA+TGG | - | chr3_4:65178788-65178807 | None:intergenic | 15.0% |
| !!! | TGGATTTTTTATAATTTGTT+AGG | - | chr3_4:65178792-65178811 | None:intergenic | 15.0% |
| !! | AAATTTGATTATAGTAAACT+TGG | - | chr3_4:65178908-65178927 | None:intergenic | 15.0% |
| !!! | ACTAAGCAAAATATATTTTA+TGG | - | chr3_4:65180369-65180388 | None:intergenic | 15.0% |
| !! | ACAAATATTATAACTAACAA+AGG | - | chr3_4:65180478-65180497 | None:intergenic | 15.0% |
| !! | TTCCAATTAGTATTTATTTA+AGG | + | chr3_4:65181561-65181580 | Msa0514470:intron | 15.0% |
| !! | TAACTATATTAATTAATCTG+TGG | + | chr3_4:65181599-65181618 | Msa0514470:intron | 15.0% |
| !! | AACTATATTAATTAATCTGT+GGG | + | chr3_4:65181600-65181619 | Msa0514470:intron | 15.0% |
| !! | GAAACAATTAAAATAAGATT+CGG | + | chr3_4:65182383-65182402 | Msa0514470:three_prime_UTR | 15.0% |
| !! | ACCATATTAAAGTTTGTATT+GGG | - | chr3_4:65177820-65177839 | None:intergenic | 20.0% |
| !! | TACCATATTAAAGTTTGTAT+TGG | - | chr3_4:65177821-65177840 | None:intergenic | 20.0% |
| !! | AAAAATGTCAACATAACTTT+AGG | + | chr3_4:65178005-65178024 | Msa0514470:intron | 20.0% |
| !! | AGACATGCAAAATAAAATAA+TGG | + | chr3_4:65178076-65178095 | Msa0514470:intron | 20.0% |
| !!! | GTATATTTTTTTTCTTTGGT+TGG | - | chr3_4:65178289-65178308 | None:intergenic | 20.0% |
| !!! | ATCGGTATATTTTTTTTCTT+TGG | - | chr3_4:65178293-65178312 | None:intergenic | 20.0% |
| !! | ATTTGATGTCAAACATTAAT+CGG | - | chr3_4:65178311-65178330 | None:intergenic | 20.0% |
| !! | TATTTAGAAAATGAAAGAAC+TGG | + | chr3_4:65178417-65178436 | Msa0514470:intron | 20.0% |
| !! | TGTTTACCAAAAAATCATAA+CGG | + | chr3_4:65178991-65179010 | Msa0514470:intron | 20.0% |
| !!! | AAAGAATTTCCCTTATTTTA+TGG | - | chr3_4:65179416-65179435 | None:intergenic | 20.0% |
| !! | TGTTGACATATAATAAACAA+TGG | + | chr3_4:65179639-65179658 | Msa0514470:intron | 20.0% |
| !!! | ATTAATTCATTGTCTACTTT+TGG | - | chr3_4:65180141-65180160 | None:intergenic | 20.0% |
| !! | CTAATTCATTTCTATCAATT+TGG | - | chr3_4:65180324-65180343 | None:intergenic | 20.0% |
| !! | TGAGAATATAATAACTGAAA+AGG | + | chr3_4:65180772-65180791 | Msa0514470:CDS | 20.0% |
| !! | TTGATTAATCTTTATAAGAG+TGG | + | chr3_4:65181408-65181427 | Msa0514470:intron | 20.0% |
| !! | TAATTGTATAGAAAGTTGTT+GGG | + | chr3_4:65181453-65181472 | Msa0514470:intron | 20.0% |
| !! | AATACTAATTGGAAACAAAA+AGG | - | chr3_4:65181555-65181574 | None:intergenic | 20.0% |
| !! | GACCTTAAATAAATACTAAT+TGG | - | chr3_4:65181566-65181585 | None:intergenic | 20.0% |
| !! | TGTCTTTAGTTAATTATTTG+AGG | + | chr3_4:65182248-65182267 | Msa0514470:three_prime_UTR | 20.0% |
| !!! | TTAAAATAAGATTCGGTTTA+TGG | + | chr3_4:65182390-65182409 | Msa0514470:three_prime_UTR | 20.0% |
| !! | AGTTTCAATTGATTGATAAC+TGG | + | chr3_4:65176960-65176979 | Msa0514470:intron | 25.0% |
| ! | TCATAGTATGAAAATAAGGA+AGG | - | chr3_4:65177288-65177307 | None:intergenic | 25.0% |
| ! | TAGGTCATAGTATGAAAATA+AGG | - | chr3_4:65177292-65177311 | None:intergenic | 25.0% |
| ! | TCTACTATTATACAAATAGG+TGG | - | chr3_4:65177325-65177344 | None:intergenic | 25.0% |
| ! | ACATTTAAGAAACAGTCAAA+TGG | - | chr3_4:65177461-65177480 | None:intergenic | 25.0% |
| !! | ATTTGACTGTTTCTTAAATG+TGG | + | chr3_4:65177460-65177479 | Msa0514470:intron | 25.0% |
| ! | ATTATTTGATGAATGATGTC+AGG | + | chr3_4:65177624-65177643 | Msa0514470:intron | 25.0% |
| ! | GTATTAGAACCTATCAATAA+GGG | + | chr3_4:65177838-65177857 | Msa0514470:intron | 25.0% |
| !! | ATTATATCTTTTGATCCAAG+TGG | - | chr3_4:65177940-65177959 | None:intergenic | 25.0% |
| ! | CATTTATGTTATCTATTGGA+CGG | - | chr3_4:65178157-65178176 | None:intergenic | 25.0% |
| ! | TTGGAATACACATGAAAATA+CGG | - | chr3_4:65178209-65178228 | None:intergenic | 25.0% |
| !! | TTACTATTGATGGTTGATAT+TGG | - | chr3_4:65178228-65178247 | None:intergenic | 25.0% |
| ! | ATATCAACCATCAATAGTAA+AGG | + | chr3_4:65178228-65178247 | Msa0514470:intron | 25.0% |
| !!! | AAGTTAGTTTTTTTGACCAA+AGG | + | chr3_4:65178357-65178376 | Msa0514470:intron | 25.0% |
| ! | AGTTAGATAAACTTGGAATA+TGG | + | chr3_4:65178384-65178403 | Msa0514470:intron | 25.0% |
| ! | GTTAGATAAACTTGGAATAT+GGG | + | chr3_4:65178385-65178404 | Msa0514470:intron | 25.0% |
| !!! | GCTTTTTTGTATGTTTGTTT+TGG | + | chr3_4:65178439-65178458 | Msa0514470:intron | 25.0% |
| ! | AATAAAGTTAAGTGACATGT+TGG | + | chr3_4:65178537-65178556 | Msa0514470:intron | 25.0% |
| !! | TAGGTATAAAACCAATTTTG+AGG | + | chr3_4:65178620-65178639 | Msa0514470:intron | 25.0% |
| ! | AAAGAAAAAAGGGTAAAAGT+TGG | - | chr3_4:65178812-65178831 | None:intergenic | 25.0% |
| ! | TGTCTTCAATACTGAAAAAT+TGG | + | chr3_4:65178963-65178982 | Msa0514470:intron | 25.0% |
| !!! | ATAGAACCGTTATGATTTTT+TGG | - | chr3_4:65179000-65179019 | None:intergenic | 25.0% |
| ! | AATTATACACACATCTCTAT+CGG | + | chr3_4:65179365-65179384 | Msa0514470:intron | 25.0% |
| ! | TCATCATGAGCAAAATTATA+AGG | + | chr3_4:65179525-65179544 | Msa0514470:intron | 25.0% |
| ! | ATAATCTATATAAGAGGAGA+AGG | - | chr3_4:65179756-65179775 | None:intergenic | 25.0% |
| ! | GTGATGATAATCTATATAAG+AGG | - | chr3_4:65179762-65179781 | None:intergenic | 25.0% |
| ! | ATAACACTATCAAAGAATGA+AGG | + | chr3_4:65179824-65179843 | Msa0514470:exon | 25.0% |
| ! | AATTAATGCCAGATTTAACT+AGG | + | chr3_4:65180154-65180173 | Msa0514470:intron | 25.0% |
| ! | TATTATATTCTCAACAGAGA+TGG | - | chr3_4:65180765-65180784 | None:intergenic | 25.0% |
| ! | GAAAAAAGCTCAAGAAAAAA+AGG | + | chr3_4:65181185-65181204 | Msa0514470:CDS | 25.0% |
| ! | ATTAATCTTTATAAGAGTGG+TGG | + | chr3_4:65181411-65181430 | Msa0514470:intron | 25.0% |
| ! | GTAATTGTATAGAAAGTTGT+TGG | + | chr3_4:65181452-65181471 | Msa0514470:intron | 25.0% |
| ! | AATTGTATAGAAAGTTGTTG+GGG | + | chr3_4:65181454-65181473 | Msa0514470:intron | 25.0% |
| ! | ATATAGTTAGCTAAAGTCTA+GGG | - | chr3_4:65181588-65181607 | None:intergenic | 25.0% |
| ! | AATATAGTTAGCTAAAGTCT+AGG | - | chr3_4:65181589-65181608 | None:intergenic | 25.0% |
| ! | AAGAAGAAAAGAATGAATGA+GGG | + | chr3_4:65181692-65181711 | Msa0514470:CDS | 25.0% |
| ! | AACTAAAGACACAAAACATA+AGG | - | chr3_4:65182239-65182258 | None:intergenic | 25.0% |
| ! | ATGTATAATGTTCAAGAGTA+AGG | + | chr3_4:65182425-65182444 | Msa0514470:three_prime_UTR | 25.0% |
| AACTAAAAGATGCTCAACAT+TGG | - | chr3_4:65176944-65176963 | None:intergenic | 30.0% | |
| TCAAAAATCGAGCATCTTAT+AGG | - | chr3_4:65176999-65177018 | None:intergenic | 30.0% | |
| ATAAACTTGTCTGATGACAT+CGG | + | chr3_4:65177026-65177045 | Msa0514470:intron | 30.0% | |
| AACAAAACATGTCAAGCAAA+TGG | - | chr3_4:65177171-65177190 | None:intergenic | 30.0% | |
| !!! | TGACATGTTTTGTTTTCTCA+TGG | + | chr3_4:65177177-65177196 | Msa0514470:intron | 30.0% |
| AAACAAAAATTTGAGAGAGC+AGG | - | chr3_4:65177242-65177261 | None:intergenic | 30.0% | |
| ! | AGTTTTTCTTTGGCATGAAA+CGG | - | chr3_4:65177576-65177595 | None:intergenic | 30.0% |
| ! | TGAAGTTCGAAGTTTTTCTT+TGG | - | chr3_4:65177586-65177605 | None:intergenic | 30.0% |
| GCCCAATACAAACTTTAATA+TGG | + | chr3_4:65177816-65177835 | Msa0514470:intron | 30.0% | |
| GGTATTAGAACCTATCAATA+AGG | + | chr3_4:65177837-65177856 | Msa0514470:intron | 30.0% | |
| GGTGCTTGTATATGTATAAA+CGG | - | chr3_4:65177869-65177888 | None:intergenic | 30.0% | |
| TATTCAAGAATGAGACAACA+TGG | + | chr3_4:65177969-65177988 | Msa0514470:intron | 30.0% | |
| ACTTTGACCTTTACTATTGA+TGG | - | chr3_4:65178238-65178257 | None:intergenic | 30.0% | |
| ! | AAAAAACTAACTTGCACTTG+TGG | - | chr3_4:65178350-65178369 | None:intergenic | 30.0% |
| !!! | AGTGACATGTTGGTTTTTTT+AGG | + | chr3_4:65178547-65178566 | Msa0514470:intron | 30.0% |
| !!! | GTGACATGTTGGTTTTTTTA+GGG | + | chr3_4:65178548-65178567 | Msa0514470:intron | 30.0% |
| ! | TTTTATACCTACAACCATGT+TGG | - | chr3_4:65178611-65178630 | None:intergenic | 30.0% |
| AATAAACAATTTGCAGCTAG+TGG | + | chr3_4:65178707-65178726 | Msa0514470:intron | 30.0% | |
| ATAAACAATTTGCAGCTAGT+GGG | + | chr3_4:65178708-65178727 | Msa0514470:intron | 30.0% | |
| ! | AGAACTTGCTTCAAGTTTAT+CGG | - | chr3_4:65178936-65178955 | None:intergenic | 30.0% |
| ! | TTCAGTATTGAAGACAGAAT+CGG | - | chr3_4:65178959-65178978 | None:intergenic | 30.0% |
| TTTGTGCAATAGATATAGAG+AGG | + | chr3_4:65179056-65179075 | Msa0514470:intron | 30.0% | |
| ATACACAAGAAGCTGTAAAA+GGG | + | chr3_4:65179152-65179171 | Msa0514470:intron | 30.0% | |
| AGATGTGTGTATAATTCGAT+TGG | - | chr3_4:65179361-65179380 | None:intergenic | 30.0% | |
| !!! | ATAAGCATGTTTTTCTGGTT+CGG | - | chr3_4:65179487-65179506 | None:intergenic | 30.0% |
| ! | GAAACATAAGCATGTTTTTC+TGG | - | chr3_4:65179492-65179511 | None:intergenic | 30.0% |
| GAAAAACATGCTTATGTTTC+TGG | + | chr3_4:65179492-65179511 | Msa0514470:intron | 30.0% | |
| ATCTCTTTATAGACATAAGC+AGG | + | chr3_4:65179684-65179703 | Msa0514470:intron | 30.0% | |
| !! | GTAGCTTTATGGAATATGAT+CGG | + | chr3_4:65179706-65179725 | Msa0514470:intron | 30.0% |
| ! | TATGTATGTTTGATAGCTGT+TGG | + | chr3_4:65180072-65180091 | Msa0514470:intron | 30.0% |
| !! | AATTCATTGTCTACTTTTGG+AGG | - | chr3_4:65180138-65180157 | None:intergenic | 30.0% |
| GGAGCAACAAATATATATGT+TGG | - | chr3_4:65180348-65180367 | None:intergenic | 30.0% | |
| TAATATTTGTGTTGCGTTTC+AGG | + | chr3_4:65180488-65180507 | Msa0514470:intron | 30.0% | |
| AATATTTGTGTTGCGTTTCA+GGG | + | chr3_4:65180489-65180508 | Msa0514470:intron | 30.0% | |
| AGATGAATCATCATTGTTGT+TGG | - | chr3_4:65180864-65180883 | None:intergenic | 30.0% | |
| AACAACAATGATGATTCATC+TGG | + | chr3_4:65180863-65180882 | Msa0514470:CDS | 30.0% | |
| ! | TGTTTCTGATAATTCAACTG+CGG | - | chr3_4:65180987-65181006 | None:intergenic | 30.0% |
| CTTATTCTTTGACACTGATA+TGG | - | chr3_4:65181020-65181039 | None:intergenic | 30.0% | |
| CATATCAGTGTCAAAGAATA+AGG | + | chr3_4:65181018-65181037 | Msa0514470:CDS | 30.0% | |
| GGATGATACTGACAATAAAA+AGG | + | chr3_4:65181129-65181148 | Msa0514470:CDS | 30.0% | |
| TGATACTGACAATAAAAAGG+AGG | + | chr3_4:65181132-65181151 | Msa0514470:CDS | 30.0% | |
| AGACAGAAAACTGCATAATA+AGG | + | chr3_4:65181252-65181271 | Msa0514470:CDS | 30.0% | |
| AAGAGAAAAATGATTCGCAT+CGG | + | chr3_4:65181362-65181381 | Msa0514470:intron | 30.0% | |
| ATTGTATAGAAAGTTGTTGG+GGG | + | chr3_4:65181455-65181474 | Msa0514470:intron | 30.0% | |
| GAAACAAAAAGGCAAATGAT+TGG | - | chr3_4:65181544-65181563 | None:intergenic | 30.0% | |
| GAAGAAGAAAAGAATGAATG+AGG | + | chr3_4:65181691-65181710 | Msa0514470:CDS | 30.0% | |
| !!! | CAACTTTGTTACTTTTGTTG+TGG | - | chr3_4:65181721-65181740 | None:intergenic | 30.0% |
| CAAAAGTAACAAAGTTGAAG+AGG | + | chr3_4:65181724-65181743 | Msa0514470:CDS | 30.0% | |
| TGAAGATTCATCTGAGAATA+TGG | + | chr3_4:65181841-65181860 | Msa0514470:CDS | 30.0% | |
| TTAAATTGCAGACTTAGTGT+TGG | + | chr3_4:65182068-65182087 | Msa0514470:intron | 30.0% | |
| ! | TCATATTAATTTGATGCTCG+TGG | - | chr3_4:65182133-65182152 | None:intergenic | 30.0% |
| TATGAAAGATATGATCGTCA+TGG | + | chr3_4:65182148-65182167 | Msa0514470:three_prime_UTR | 30.0% | |
| ATGAAAGATATGATCGTCAT+GGG | + | chr3_4:65182149-65182168 | Msa0514470:three_prime_UTR | 30.0% | |
| AAGACTATGCAATGCAATAA+TGG | + | chr3_4:65182172-65182191 | Msa0514470:three_prime_UTR | 30.0% | |
| AGACTATGCAATGCAATAAT+GGG | + | chr3_4:65182173-65182192 | Msa0514470:three_prime_UTR | 30.0% | |
| TAAGCAAGTGAATGTAAAGA+AGG | + | chr3_4:65182361-65182380 | Msa0514470:three_prime_UTR | 30.0% | |
| ! | AGTTTTCATATGCACTGTCA+AGG | + | chr3_4:65176808-65176827 | Msa0514470:five_prime_UTR | 35.0% |
| TTGGGGAAGGATTAAAATGT+CGG | - | chr3_4:65176918-65176937 | None:intergenic | 35.0% | |
| GATCAGAGACATGTTGTATT+TGG | + | chr3_4:65177064-65177083 | Msa0514470:intron | 35.0% | |
| TGTTGTATTTGGCCAAGTAT+TGG | + | chr3_4:65177075-65177094 | Msa0514470:intron | 35.0% | |
| AGTTGGAGTTAGTACCATAT+TGG | + | chr3_4:65177350-65177369 | Msa0514470:intron | 35.0% | |
| GTTGGAGTTAGTACCATATT+GGG | + | chr3_4:65177351-65177370 | Msa0514470:intron | 35.0% | |
| ! | GGATTTGAAATCTCCCAATA+TGG | - | chr3_4:65177367-65177386 | None:intergenic | 35.0% |
| GGAGATTTCAAATCCTACAT+GGG | + | chr3_4:65177372-65177391 | Msa0514470:intron | 35.0% | |
| AAAGAAGGGTTTCTGCAATT+TGG | - | chr3_4:65177418-65177437 | None:intergenic | 35.0% | |
| ! | GACTGTTTCTTAAATGTGGA+AGG | + | chr3_4:65177464-65177483 | Msa0514470:intron | 35.0% |
| !! | ACTTACAAAATCGGTTTGCA+AGG | - | chr3_4:65177787-65177806 | None:intergenic | 35.0% |
| TGAAAAAACCAAGTTCCACT+TGG | + | chr3_4:65177922-65177941 | Msa0514470:intron | 35.0% | |
| ! | GCATGTCTTTTTATCTCTTC+AGG | - | chr3_4:65178064-65178083 | None:intergenic | 35.0% |
| ! | TGTGCCTTTCTCTCTTTTAT+TGG | + | chr3_4:65178129-65178148 | Msa0514470:intron | 35.0% |
| GGTTCCAATAAAAGAGAGAA+AGG | - | chr3_4:65178136-65178155 | None:intergenic | 35.0% | |
| ACACATGAAAATACGGTGTT+GGG | - | chr3_4:65178202-65178221 | None:intergenic | 35.0% | |
| TACACATGAAAATACGGTGT+TGG | - | chr3_4:65178203-65178222 | None:intergenic | 35.0% | |
| ! | GTTTATCTAACTTGCACCTT+TGG | - | chr3_4:65178376-65178395 | None:intergenic | 35.0% |
| AGGTGCAAGTTAGATAAACT+TGG | + | chr3_4:65178377-65178396 | Msa0514470:intron | 35.0% | |
| TTCTACTCTACAGTACTACT+AGG | + | chr3_4:65178467-65178486 | Msa0514470:intron | 35.0% | |
| CAGCAAATAATGTACCAACA+TGG | + | chr3_4:65178594-65178613 | Msa0514470:intron | 35.0% | |
| TAATGTACCAACATGGTTGT+AGG | + | chr3_4:65178601-65178620 | Msa0514470:intron | 35.0% | |
| TGAAGAGCTTACCTCAAAAT+TGG | - | chr3_4:65178634-65178653 | None:intergenic | 35.0% | |
| CTCTTCAGTAAAATTCAACG+CGG | + | chr3_4:65178647-65178666 | Msa0514470:intron | 35.0% | |
| GTTAGGATGGATAACTTTGT+GGG | - | chr3_4:65178775-65178794 | None:intergenic | 35.0% | |
| TGTTAGGATGGATAACTTTG+TGG | - | chr3_4:65178776-65178795 | None:intergenic | 35.0% | |
| TTGTGTATCAAACACCTAAC+TGG | - | chr3_4:65179140-65179159 | None:intergenic | 35.0% | |
| GATACACAAGAAGCTGTAAA+AGG | + | chr3_4:65179151-65179170 | Msa0514470:intron | 35.0% | |
| TACACAAGAAGCTGTAAAAG+GGG | + | chr3_4:65179153-65179172 | Msa0514470:intron | 35.0% | |
| AAAGGCAAAGAGAAATCTTG+GGG | - | chr3_4:65179229-65179248 | None:intergenic | 35.0% | |
| GAAAGGCAAAGAGAAATCTT+GGG | - | chr3_4:65179230-65179249 | None:intergenic | 35.0% | |
| TGAAAGGCAAAGAGAAATCT+TGG | - | chr3_4:65179231-65179250 | None:intergenic | 35.0% | |
| AGATTTCTCTTTGCCTTTCA+TGG | + | chr3_4:65179231-65179250 | Msa0514470:intron | 35.0% | |
| TGTGCATGTGCCATAAAATA+AGG | + | chr3_4:65179403-65179422 | Msa0514470:intron | 35.0% | |
| GTGCATGTGCCATAAAATAA+GGG | + | chr3_4:65179404-65179423 | Msa0514470:intron | 35.0% | |
| GCAAAATATACGCGAGATAT+GGG | - | chr3_4:65179443-65179462 | None:intergenic | 35.0% | |
| AGCAAAATATACGCGAGATA+TGG | - | chr3_4:65179444-65179463 | None:intergenic | 35.0% | |
| GCTATTACTAGTAGGCTATT+TGG | + | chr3_4:65179615-65179634 | Msa0514470:intron | 35.0% | |
| AGGTAACTAAGATCAGTCAA+TGG | + | chr3_4:65179844-65179863 | Msa0514470:intron | 35.0% | |
| TATATGCAGTTGAAGCAGTA+AGG | - | chr3_4:65179892-65179911 | None:intergenic | 35.0% | |
| !! | CTTAATTTGCAGCAGTTACT+TGG | + | chr3_4:65179938-65179957 | Msa0514470:intron | 35.0% |
| GATGGATGCATAGAAAACTT+CGG | + | chr3_4:65179960-65179979 | Msa0514470:CDS | 35.0% | |
| TAGACATGCCTAGTTAAATC+TGG | - | chr3_4:65180165-65180184 | None:intergenic | 35.0% | |
| TTTACAGTGGGCAATACTTA+TGG | - | chr3_4:65180258-65180277 | None:intergenic | 35.0% | |
| ! | TTTGTGAGCTAGTTTACAGT+GGG | - | chr3_4:65180270-65180289 | None:intergenic | 35.0% |
| ! | TCTAGAATGATCAGAAGTCT+TGG | + | chr3_4:65180388-65180407 | Msa0514470:intron | 35.0% |
| CTAACAAAGGATGTCTATGA+CGG | - | chr3_4:65180465-65180484 | None:intergenic | 35.0% | |
| ! | ACTATCTGAAACCGAACTTT+GGG | + | chr3_4:65180549-65180568 | Msa0514470:CDS | 35.0% |
| AGAAAATCTTTCGAAGCAGT+TGG | + | chr3_4:65180617-65180636 | Msa0514470:CDS | 35.0% | |
| GAAAATCTTTCGAAGCAGTT+GGG | + | chr3_4:65180618-65180637 | Msa0514470:CDS | 35.0% | |
| ! | ATGGAAAATGATGGTGTTAG+TGG | - | chr3_4:65180746-65180765 | None:intergenic | 35.0% |
| TCAACAGAGATGGAAAATGA+TGG | - | chr3_4:65180755-65180774 | None:intergenic | 35.0% | |
| TACTGACAATAAAAAGGAGG+AGG | + | chr3_4:65181135-65181154 | Msa0514470:CDS | 35.0% | |
| !!! | CTTTTTTCTCATGAGATGCA+TGG | - | chr3_4:65181173-65181192 | None:intergenic | 35.0% |
| AATTGAATCAACAGAGGTCT+GGG | - | chr3_4:65181227-65181246 | None:intergenic | 35.0% | |
| AAATTGAATCAACAGAGGTC+TGG | - | chr3_4:65181228-65181247 | None:intergenic | 35.0% | |
| TGCTGAAATTGAATCAACAG+AGG | - | chr3_4:65181233-65181252 | None:intergenic | 35.0% | |
| AGATTCTCCAGATATTTCAC+CGG | + | chr3_4:65181627-65181646 | Msa0514470:intron | 35.0% | |
| AAGAAAAGAATGAATGAGGG+AGG | + | chr3_4:65181695-65181714 | Msa0514470:CDS | 35.0% | |
| ACTTTCAGTTCTATACACTG+TGG | + | chr3_4:65182485-65182504 | Msa0514470:three_prime_UTR | 35.0% | |
| ! | AACTGACTCCCATTAGTGTT+GGG | - | chr3_4:65176792-65176811 | None:intergenic | 40.0% |
| ! | AAACTGACTCCCATTAGTGT+TGG | - | chr3_4:65176793-65176812 | None:intergenic | 40.0% |
| !!! | ACCCAAGCTTAGTGGATTTT+GGG | - | chr3_4:65176875-65176894 | None:intergenic | 40.0% |
| TCTAATAGACCCAAGCTTAG+TGG | - | chr3_4:65176883-65176902 | None:intergenic | 40.0% | |
| ATGCTCAACATTGGAACTTG+GGG | - | chr3_4:65176935-65176954 | None:intergenic | 40.0% | |
| GATGCTCAACATTGGAACTT+GGG | - | chr3_4:65176936-65176955 | None:intergenic | 40.0% | |
| AGATGCTCAACATTGGAACT+TGG | - | chr3_4:65176937-65176956 | None:intergenic | 40.0% | |
| !! | GTATTTGGCCAAGTATTGGA+AGG | + | chr3_4:65177079-65177098 | Msa0514470:intron | 40.0% |
| !! | TGTTAGGTTGATTGAACCAC+AGG | + | chr3_4:65177111-65177130 | Msa0514470:intron | 40.0% |
| AGATTGTGGTTATCAGTGAC+TGG | + | chr3_4:65177138-65177157 | Msa0514470:intron | 40.0% | |
| ! | CTCTTTATTTCTTGCTGCTG+AGG | + | chr3_4:65177203-65177222 | Msa0514470:intron | 40.0% |
| ! | TTTATTTCTTGCTGCTGAGG+AGG | + | chr3_4:65177206-65177225 | Msa0514470:intron | 40.0% |
| AGGAAGGTAGAGAACTCATT+TGG | - | chr3_4:65177272-65177291 | None:intergenic | 40.0% | |
| AATAGGTGGCAAGAGTTTGT+AGG | - | chr3_4:65177311-65177330 | None:intergenic | 40.0% | |
| GGGAGATTTCAAATCCTACA+TGG | + | chr3_4:65177371-65177390 | Msa0514470:intron | 40.0% | |
| ! | CTGCAATTTGGCTTAACTTG+AGG | - | chr3_4:65177406-65177425 | None:intergenic | 40.0% |
| ! | CTAGCACTAGTCTGCAAAAT+TGG | + | chr3_4:65177504-65177523 | Msa0514470:intron | 40.0% |
| AGATGAACCCTGAACATCAA+CGG | - | chr3_4:65177543-65177562 | None:intergenic | 40.0% | |
| TTAAGCTGTCTTGTGGTACA+TGG | + | chr3_4:65177649-65177668 | Msa0514470:intron | 40.0% | |
| ! | CTTTTGATCCAAGTGGAACT+TGG | - | chr3_4:65177933-65177952 | None:intergenic | 40.0% |
| CAGGGTATAAAGCTCATTTC+TGG | + | chr3_4:65178734-65178753 | Msa0514470:intron | 40.0% | |
| ATGGATAACTTTGTGGGTGT+GGG | - | chr3_4:65178769-65178788 | None:intergenic | 40.0% | |
| TGTTACATCCACAACCAGTT+AGG | + | chr3_4:65179123-65179142 | Msa0514470:intron | 40.0% | |
| ATCAAACACCTAACTGGTTG+TGG | - | chr3_4:65179134-65179153 | None:intergenic | 40.0% | |
| ACACAAGAAGCTGTAAAAGG+GGG | + | chr3_4:65179154-65179173 | Msa0514470:intron | 40.0% | |
| ATAATGTGACCATTCTCGTG+AGG | + | chr3_4:65179184-65179203 | Msa0514470:intron | 40.0% | |
| TAATGTGACCATTCTCGTGA+GGG | + | chr3_4:65179185-65179204 | Msa0514470:intron | 40.0% | |
| CTGAAGAAAACTTCCGTTGT+TGG | + | chr3_4:65179295-65179314 | Msa0514470:intron | 40.0% | |
| !! | TTCGGTTTCTAGAATCTGAC+CGG | - | chr3_4:65179469-65179488 | None:intergenic | 40.0% |
| TGCAGCTTGACAAAACAGTA+AGG | - | chr3_4:65179554-65179573 | None:intergenic | 40.0% | |
| TTTGTCAAGCTGCACATGAT+CGG | + | chr3_4:65179560-65179579 | Msa0514470:intron | 40.0% | |
| ACTAGTAATAGCTACCGTGT+GGG | - | chr3_4:65179607-65179626 | None:intergenic | 40.0% | |
| TACTAGTAATAGCTACCGTG+TGG | - | chr3_4:65179608-65179627 | None:intergenic | 40.0% | |
| ACACGGTAGCTATTACTAGT+AGG | + | chr3_4:65179607-65179626 | Msa0514470:intron | 40.0% | |
| ! | GACATAAGCAGGTAGCTTTA+TGG | + | chr3_4:65179695-65179714 | Msa0514470:intron | 40.0% |
| ATTTGCAGCAGTTACTTGGA+TGG | + | chr3_4:65179942-65179961 | Msa0514470:intron | 40.0% | |
| ! | GTTTGTGAGCTAGTTTACAG+TGG | - | chr3_4:65180271-65180290 | None:intergenic | 40.0% |
| ! | CACTATCTGAAACCGAACTT+TGG | + | chr3_4:65180548-65180567 | Msa0514470:CDS | 40.0% |
| ! | TATTTTCCGCTCCCAAAGTT+CGG | - | chr3_4:65180563-65180582 | None:intergenic | 40.0% |
| AGTAGACGAGGAAGAAGATA+AGG | + | chr3_4:65180652-65180671 | Msa0514470:CDS | 40.0% | |
| TTCCTAGCAATTGGAACTCT+TGG | + | chr3_4:65180701-65180720 | Msa0514470:CDS | 40.0% | |
| AACCAAGAGTTCCAATTGCT+AGG | - | chr3_4:65180706-65180725 | None:intergenic | 40.0% | |
| AGCAATTGGAACTCTTGGTT+TGG | + | chr3_4:65180706-65180725 | Msa0514470:CDS | 40.0% | |
| !! | TGGAACTCTTGGTTTGGAAT+CGG | + | chr3_4:65180712-65180731 | Msa0514470:CDS | 40.0% |
| ! | AATGATGGTGTTAGTGGTGA+TGG | - | chr3_4:65180740-65180759 | None:intergenic | 40.0% |
| ! | TCCATGACTATTTCTCTCTG+CGG | - | chr3_4:65180909-65180928 | None:intergenic | 40.0% |
| AAACTCCATTTGTCCACTTC+AGG | + | chr3_4:65180946-65180965 | Msa0514470:CDS | 40.0% | |
| AACTCCATTTGTCCACTTCA+GGG | + | chr3_4:65180947-65180966 | Msa0514470:CDS | 40.0% | |
| ATATCCCTGAAGTGGACAAA+TGG | - | chr3_4:65180954-65180973 | None:intergenic | 40.0% | |
| GAGATGCATGGCAGATTTAT+TGG | - | chr3_4:65181161-65181180 | None:intergenic | 40.0% | |
| TCCAAGATTCATGTGCAACT+TGG | + | chr3_4:65181338-65181357 | Msa0514470:intron | 40.0% | |
| GAACTTTCCGGTGAAATATC+TGG | - | chr3_4:65181637-65181656 | None:intergenic | 40.0% | |
| !! | GATTTTCAGGGTGAACTTTC+CGG | - | chr3_4:65181649-65181668 | None:intergenic | 40.0% |
| ! | CTGCACATGTTGGATTTTCA+GGG | - | chr3_4:65181661-65181680 | None:intergenic | 40.0% |
| ! | TCTGCACATGTTGGATTTTC+AGG | - | chr3_4:65181662-65181681 | None:intergenic | 40.0% |
| ATACAGCCAAAAAGAGCAGT+TGG | + | chr3_4:65181758-65181777 | Msa0514470:CDS | 40.0% | |
| ! | TCCTTTCCAACTGCTCTTTT+TGG | - | chr3_4:65181767-65181786 | None:intergenic | 40.0% |
| ACATCTATCTCACTCTGCAT+TGG | + | chr3_4:65181915-65181934 | Msa0514470:intron | 40.0% | |
| GAAATGAAAACTCAAGCGCA+TGG | + | chr3_4:65182025-65182044 | Msa0514470:intron | 40.0% | |
| !! | CTTAGTGTTGGAGCTCTAAA+AGG | + | chr3_4:65182080-65182099 | Msa0514470:exon | 40.0% |
| !! | TTGGAGCTCTAAAAGGCAAA+GGG | + | chr3_4:65182087-65182106 | Msa0514470:exon | 40.0% |
| !! | AAGAGTGTTAAGAGTCTGTC+CGG | + | chr3_4:65182280-65182299 | Msa0514470:three_prime_UTR | 40.0% |
| CATCCTTGTGAAACCATATC+CGG | - | chr3_4:65182302-65182321 | None:intergenic | 40.0% | |
| TGCCCAAAATCCACTAAGCT+TGG | + | chr3_4:65176870-65176889 | Msa0514470:intron | 45.0% | |
| GCCCAAAATCCACTAAGCTT+GGG | + | chr3_4:65176871-65176890 | Msa0514470:intron | 45.0% | |
| !!! | GACCCAAGCTTAGTGGATTT+TGG | - | chr3_4:65176876-65176895 | None:intergenic | 45.0% |
| TCAACATTGGAACTTGGGGA+AGG | - | chr3_4:65176931-65176950 | None:intergenic | 45.0% | |
| TGTCCTTGCCTTCCAATACT+TGG | - | chr3_4:65177090-65177109 | None:intergenic | 45.0% | |
| TGGAAGGCAAGGACATTGTT+AGG | + | chr3_4:65177095-65177114 | Msa0514470:intron | 45.0% | |
| TAACCACAATCTGTGTCCTG+TGG | - | chr3_4:65177130-65177149 | None:intergenic | 45.0% | |
| TGAGGATACTCTACCCATGT+AGG | - | chr3_4:65177388-65177407 | None:intergenic | 45.0% | |
| ATGACTGCCGTTGATGTTCA+GGG | + | chr3_4:65177533-65177552 | Msa0514470:intron | 45.0% | |
| TTGGCATGAAACGGAAGAAG+AGG | - | chr3_4:65177567-65177586 | None:intergenic | 45.0% | |
| !! | TCAGGCTTTAAGCTGTCTTG+TGG | + | chr3_4:65177642-65177661 | Msa0514470:intron | 45.0% |
| ACGGTGATGCCCTTATTGAT+AGG | - | chr3_4:65177850-65177869 | None:intergenic | 45.0% | |
| ACGCTCAGCACTATTAGGTT+TGG | - | chr3_4:65177890-65177909 | None:intergenic | 45.0% | |
| TCTACAGTACTACTAGGTCC+AGG | + | chr3_4:65178473-65178492 | Msa0514470:intron | 45.0% | |
| CTACAGTACTACTAGGTCCA+GGG | + | chr3_4:65178474-65178493 | Msa0514470:intron | 45.0% | |
| TACAGTACTACTAGGTCCAG+GGG | + | chr3_4:65178475-65178494 | Msa0514470:intron | 45.0% | |
| CATATATTACCCGAATCCCC+TGG | - | chr3_4:65178494-65178513 | None:intergenic | 45.0% | |
| !! | ATTTGCAGCTAGTGGGTTTC+AGG | + | chr3_4:65178715-65178734 | Msa0514470:intron | 45.0% |
| !! | TTTGCAGCTAGTGGGTTTCA+GGG | + | chr3_4:65178716-65178735 | Msa0514470:intron | 45.0% |
| TGGATAACTTTGTGGGTGTG+GGG | - | chr3_4:65178768-65178787 | None:intergenic | 45.0% | |
| GATGGATAACTTTGTGGGTG+TGG | - | chr3_4:65178770-65178789 | None:intergenic | 45.0% | |
| AATGTGACCATTCTCGTGAG+GGG | + | chr3_4:65179186-65179205 | Msa0514470:intron | 45.0% | |
| TTCTCTTTGCCTTTCATGGC+TGG | + | chr3_4:65179235-65179254 | Msa0514470:intron | 45.0% | |
| TGGATATCACACGCCAACAA+CGG | - | chr3_4:65179311-65179330 | None:intergenic | 45.0% | |
| ATCCATTGCCTGAAGATTGC+TGG | + | chr3_4:65179326-65179345 | Msa0514470:intron | 45.0% | |
| TCTATCGGTGTGTATCACTG+TGG | + | chr3_4:65179380-65179399 | Msa0514470:intron | 45.0% | |
| ! | CTCGCGTATATTTTGCTTCC+CGG | + | chr3_4:65179447-65179466 | Msa0514470:intron | 45.0% |
| !! | TCGGTTTCTAGAATCTGACC+GGG | - | chr3_4:65179468-65179487 | None:intergenic | 45.0% |
| CGGATAGGTGAAGATTGATC+AGG | + | chr3_4:65179580-65179599 | Msa0514470:intron | 45.0% | |
| AAGATTGATCAGGACCCACA+CGG | + | chr3_4:65179590-65179609 | Msa0514470:intron | 45.0% | |
| CACTGAACCTTTCAAAGACC+TGG | + | chr3_4:65179991-65180010 | Msa0514470:CDS | 45.0% | |
| AAAATAGCTTACCAGCGACC+AGG | - | chr3_4:65180012-65180031 | None:intergenic | 45.0% | |
| ATGGACGGTGATATATGCGT+TGG | - | chr3_4:65180239-65180258 | None:intergenic | 45.0% | |
| CAGTGGGCAATACTTATGGA+CGG | - | chr3_4:65180254-65180273 | None:intergenic | 45.0% | |
| CCATGAACTCAAGTGGCATT+CGG | - | chr3_4:65180434-65180453 | None:intergenic | 45.0% | |
| ! | ATGCCACTTGAGTTCATGGT+TGG | + | chr3_4:65180435-65180454 | Msa0514470:intron | 45.0% |
| CAAAGGATGTCTATGACGGT+TGG | - | chr3_4:65180461-65180480 | None:intergenic | 45.0% | |
| AGACGAGGAAGAAGATAAGG+AGG | + | chr3_4:65180655-65180674 | Msa0514470:CDS | 45.0% | |
| AGGAAGAAGATAAGGAGGCA+TGG | + | chr3_4:65180660-65180679 | Msa0514470:CDS | 45.0% | |
| ! | GGAAGAAGATAAGGAGGCAT+GGG | + | chr3_4:65180661-65180680 | Msa0514470:CDS | 45.0% |
| ! | GAAGAAGATAAGGAGGCATG+GGG | + | chr3_4:65180662-65180681 | Msa0514470:CDS | 45.0% |
| AGTTCCAATTGCTAGGAAGC+CGG | - | chr3_4:65180699-65180718 | None:intergenic | 45.0% | |
| GATCAGCTTCAGCTCATTCT+CGG | - | chr3_4:65180810-65180829 | None:intergenic | 45.0% | |
| ACCGCAGAGAGAAATAGTCA+TGG | + | chr3_4:65180905-65180924 | Msa0514470:CDS | 45.0% | |
| CCAAAGAGATATCCCTGAAG+TGG | - | chr3_4:65180962-65180981 | None:intergenic | 45.0% | |
| CCACTTCAGGGATATCTCTT+TGG | + | chr3_4:65180959-65180978 | Msa0514470:CDS | 45.0% | |
| GAGAAGCAAACAAGCAGATC+AGG | + | chr3_4:65181087-65181106 | Msa0514470:CDS | 45.0% | |
| GCAGATCAGGACAATCTTGT+TGG | + | chr3_4:65181100-65181119 | Msa0514470:CDS | 45.0% | |
| GGACAATCTTGTTGGAGCAA+AGG | + | chr3_4:65181108-65181127 | Msa0514470:CDS | 45.0% | |
| GCCAAGTTGCACATGAATCT+TGG | - | chr3_4:65181342-65181361 | None:intergenic | 45.0% | |
| TCGTACTTCTCTGCACATGT+TGG | - | chr3_4:65181671-65181690 | None:intergenic | 45.0% | |
| GCCAAAAAGAGCAGTTGGAA+AGG | + | chr3_4:65181763-65181782 | Msa0514470:CDS | 45.0% | |
| ACATAGGACAGTGCAAGAAG+AGG | + | chr3_4:65181789-65181808 | Msa0514470:CDS | 45.0% | |
| AGGCAACTCCAAATTACCCT+TGG | + | chr3_4:65181809-65181828 | Msa0514470:CDS | 45.0% | |
| CAACTCCAAATTACCCTTGG+CGG | + | chr3_4:65181812-65181831 | Msa0514470:CDS | 45.0% | |
| CATCTGAGAATATGGAGCAG+TGG | + | chr3_4:65181849-65181868 | Msa0514470:CDS | 45.0% | |
| GCAGTGGATCAAAACAGATG+TGG | + | chr3_4:65181865-65181884 | Msa0514470:CDS | 45.0% | |
| ! | CAAGCGCATGGCTAAGATTT+TGG | + | chr3_4:65182037-65182056 | Msa0514470:intron | 45.0% |
| !! | GTTGGAGCTCTAAAAGGCAA+AGG | + | chr3_4:65182086-65182105 | Msa0514470:exon | 45.0% |
| TCTAAAAGGCAAAGGGCGAA+CGG | + | chr3_4:65182094-65182113 | Msa0514470:exon | 45.0% | |
| GTTAAGAGTCTGTCCGGATA+TGG | + | chr3_4:65182286-65182305 | Msa0514470:three_prime_UTR | 45.0% | |
| TGTCCGGATATGGTTTCACA+AGG | + | chr3_4:65182296-65182315 | Msa0514470:three_prime_UTR | 45.0% | |
| !!! | AAATTTTTTTTTTATACTTT+TGG | - | chr3_4:65178872-65178891 | None:intergenic | 5.0% |
| ACATGTCTCTGATCCAGCCA+CGG | - | chr3_4:65177058-65177077 | None:intergenic | 50.0% | |
| !! | TGGCCAAGTATTGGAAGGCA+AGG | + | chr3_4:65177084-65177103 | Msa0514470:intron | 50.0% |
| GAACCACAGGACACAGATTG+TGG | + | chr3_4:65177124-65177143 | Msa0514470:intron | 50.0% | |
| GATGACTGCCGTTGATGTTC+AGG | + | chr3_4:65177532-65177551 | Msa0514470:intron | 50.0% | |
| ! | ACCTAATAGTGCTGAGCGTG+AGG | + | chr3_4:65177891-65177910 | Msa0514470:intron | 50.0% |
| ! | CCTAATAGTGCTGAGCGTGA+GGG | + | chr3_4:65177892-65177911 | Msa0514470:intron | 50.0% |
| ACTACTAGGTCCAGGGGATT+CGG | + | chr3_4:65178481-65178500 | Msa0514470:intron | 50.0% | |
| ATGTGACCATTCTCGTGAGG+GGG | + | chr3_4:65179187-65179206 | Msa0514470:intron | 50.0% | |
| CATGTACGACCAGTGACACA+TGG | - | chr3_4:65179263-65179282 | None:intergenic | 50.0% | |
| ! | CATGTGTCACTGGTCGTACA+TGG | + | chr3_4:65179261-65179280 | Msa0514470:intron | 50.0% |
| TGCCAGCAATCTTCAGGCAA+TGG | - | chr3_4:65179331-65179350 | None:intergenic | 50.0% | |
| CGTGTATGCCAGCAATCTTC+AGG | - | chr3_4:65179337-65179356 | None:intergenic | 50.0% | |
| CAAGCTGCACATGATCGGAT+AGG | + | chr3_4:65179565-65179584 | Msa0514470:intron | 50.0% | |
| ATCAGAAGTCTTGGCGAGTG+AGG | + | chr3_4:65180397-65180416 | Msa0514470:intron | 50.0% | |
| TCAGAAGTCTTGGCGAGTGA+GGG | + | chr3_4:65180398-65180417 | Msa0514470:intron | 50.0% | |
| ! | CCGAATGCCACTTGAGTTCA+TGG | + | chr3_4:65180431-65180450 | Msa0514470:intron | 50.0% |
| TGGCCAACCATGAACTCAAG+TGG | - | chr3_4:65180441-65180460 | None:intergenic | 50.0% | |
| TTTGTGTTGCGTTTCAGGGC+AGG | + | chr3_4:65180493-65180512 | Msa0514470:intron | 50.0% | |
| ! | GCAGGCAACATCAGTTGATG+AGG | + | chr3_4:65180511-65180530 | Msa0514470:CDS | 50.0% |
| ! | CTGAAACCGAACTTTGGGAG+CGG | + | chr3_4:65180554-65180573 | Msa0514470:CDS | 50.0% |
| TCTTTCGAAGCAGTTGGGAG+TGG | + | chr3_4:65180623-65180642 | Msa0514470:CDS | 50.0% | |
| TTCCAATTGCTAGGAAGCCG+GGG | - | chr3_4:65180697-65180716 | None:intergenic | 50.0% | |
| GTTCCAATTGCTAGGAAGCC+GGG | - | chr3_4:65180698-65180717 | None:intergenic | 50.0% | |
| TTCTCTCTGCGGTGCTTACA+TGG | - | chr3_4:65180898-65180917 | None:intergenic | 50.0% | |
| ACACAGCCAGAGAACAACAC+TGG | + | chr3_4:65181051-65181070 | Msa0514470:CDS | 50.0% | |
| CACAGCCAGAGAACAACACT+GGG | + | chr3_4:65181052-65181071 | Msa0514470:CDS | 50.0% | |
| ! | AGAGGTCTGGGAAGAAGCAT+GGG | - | chr3_4:65181215-65181234 | None:intergenic | 50.0% |
| CCCTCACGCTCAGCACTATT+AGG | - | chr3_4:65177895-65177914 | None:intergenic | 55.0% | |
| CTACTAGGTCCAGGGGATTC+GGG | + | chr3_4:65178482-65178501 | Msa0514470:intron | 55.0% | |
| CACATGGCACCAGCCATGAA+AGG | - | chr3_4:65179247-65179266 | None:intergenic | 55.0% | |
| CCAGCGACCAGGTCTTTGAA+AGG | - | chr3_4:65180001-65180020 | None:intergenic | 55.0% | |
| CCTTTCAAAGACCTGGTCGC+TGG | + | chr3_4:65179998-65180017 | Msa0514470:CDS | 55.0% | |
| GAGTGGTAGAGCAGTAGACG+AGG | + | chr3_4:65180640-65180659 | Msa0514470:CDS | 55.0% | |
| ! | GAAGATAAGGAGGCATGGGG+TGG | + | chr3_4:65180665-65180684 | Msa0514470:CDS | 55.0% |
| ! | GCATGGGGTGGTATTTTCCC+CGG | + | chr3_4:65180677-65180696 | Msa0514470:CDS | 55.0% |
| TTCCCCGGCTTCCTAGCAAT+TGG | + | chr3_4:65180692-65180711 | Msa0514470:CDS | 55.0% | |
| ! | GCTCACCCAGTGTTGTTCTC+TGG | - | chr3_4:65181060-65181079 | None:intergenic | 55.0% |
| ! | GAGGTCTGGGAAGAAGCATG+GGG | - | chr3_4:65181214-65181233 | None:intergenic | 55.0% |
| CAGAGGTCTGGGAAGAAGCA+TGG | - | chr3_4:65181216-65181235 | None:intergenic | 55.0% | |
| CTCCAAATTACCCTTGGCGG+TGG | + | chr3_4:65181815-65181834 | Msa0514470:CDS | 55.0% | |
| TGCCACCGCCAAGGGTAATT+TGG | - | chr3_4:65181820-65181839 | None:intergenic | 55.0% | |
| ATCTTCACTGCCACCGCCAA+GGG | - | chr3_4:65181828-65181847 | None:intergenic | 55.0% | |
| AATCTTCACTGCCACCGCCA+AGG | - | chr3_4:65181829-65181848 | None:intergenic | 55.0% | |
| AGGCAAAGGGCGAACGGAAT+TGG | + | chr3_4:65182100-65182119 | Msa0514470:three_prime_UTR | 55.0% | |
| GGCAAAGGGCGAACGGAATT+GGG | + | chr3_4:65182101-65182120 | Msa0514470:three_prime_UTR | 55.0% | |
| GATGACATCGGCAGACACCG+TGG | + | chr3_4:65177038-65177057 | Msa0514470:intron | 60.0% | |
| GCAGATCCCCCTCACGAGAA+TGG | - | chr3_4:65179196-65179215 | None:intergenic | 60.0% | |
| TCTCGTGAGGGGGATCTGCT+AGG | + | chr3_4:65179197-65179216 | Msa0514470:intron | 60.0% | |
| !! | TGGCTGGTGCCATGTGTCAC+TGG | + | chr3_4:65179251-65179270 | Msa0514470:intron | 60.0% |
| ACATCGGCAGACACCGTGGC+TGG | + | chr3_4:65177042-65177061 | Msa0514470:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 65176788 | 65182508 | 65176788 | ID=Msa0514470;Name=Msa0514470 |
| chr3_4 | mRNA | 65176788 | 65182508 | 65176788 | ID=Msa0514470-mRNA-1;Parent=Msa0514470;Name=Msa0514470-mRNA-1;_AED=0.12;_eAED=0.12;_QI=111|1|1|1|0.6|0.5|6|410|373 |
| chr3_4 | exon | 65176788 | 65176829 | 65176788 | ID=Msa0514470-mRNA-1:exon:16501;Parent=Msa0514470-mRNA-1 |
| chr3_4 | exon | 65179771 | 65179845 | 65179771 | ID=Msa0514470-mRNA-1:exon:16502;Parent=Msa0514470-mRNA-1 |
| chr3_4 | exon | 65179950 | 65180019 | 65179950 | ID=Msa0514470-mRNA-1:exon:16503;Parent=Msa0514470-mRNA-1 |
| chr3_4 | exon | 65180510 | 65181273 | 65180510 | ID=Msa0514470-mRNA-1:exon:16504;Parent=Msa0514470-mRNA-1 |
| chr3_4 | exon | 65181629 | 65181890 | 65181629 | ID=Msa0514470-mRNA-1:exon:16505;Parent=Msa0514470-mRNA-1 |
| chr3_4 | exon | 65182079 | 65182508 | 65182079 | ID=Msa0514470-mRNA-1:exon:16506;Parent=Msa0514470-mRNA-1 |
| chr3_4 | five_prime_UTR | 65176788 | 65176829 | 65176788 | ID=Msa0514470-mRNA-1:five_prime_utr;Parent=Msa0514470-mRNA-1 |
| chr3_4 | five_prime_UTR | 65179771 | 65179839 | 65179771 | ID=Msa0514470-mRNA-1:five_prime_utr;Parent=Msa0514470-mRNA-1 |
| chr3_4 | CDS | 65179840 | 65179845 | 65179840 | ID=Msa0514470-mRNA-1:cds;Parent=Msa0514470-mRNA-1 |
| chr3_4 | CDS | 65179950 | 65180019 | 65179950 | ID=Msa0514470-mRNA-1:cds;Parent=Msa0514470-mRNA-1 |
| chr3_4 | CDS | 65180510 | 65181273 | 65180510 | ID=Msa0514470-mRNA-1:cds;Parent=Msa0514470-mRNA-1 |
| chr3_4 | CDS | 65181629 | 65181890 | 65181629 | ID=Msa0514470-mRNA-1:cds;Parent=Msa0514470-mRNA-1 |
| chr3_4 | CDS | 65182079 | 65182098 | 65182079 | ID=Msa0514470-mRNA-1:cds;Parent=Msa0514470-mRNA-1 |
| chr3_4 | three_prime_UTR | 65182099 | 65182508 | 65182099 | ID=Msa0514470-mRNA-1:three_prime_utr;Parent=Msa0514470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
