AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1079430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079430 MtrunA17_Chr7g0264381 96.881 481 11 1 1 481 1 477 0.0 940
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1079430 AT2G37035.1 44.589 462 183 6 22 481 30 420 1.31e-117 354

Find 101 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATTCTCTGTGGATTTC+TGG 0.061482 7_2:+78623898 Msa1079430:CDS
TTGTTGCTGATAATGGAATT+AGG 0.178046 7_2:+78623211 Msa1079430:CDS
GTTATGTCGCCTTGGGTTAC+TGG 0.193809 7_2:+78623813 Msa1079430:CDS
GGTTCTTTATCTGTGGCTTA+TGG 0.202638 7_2:+78623513 Msa1079430:CDS
TCCGATCTTGTTGCTGATAA+TGG 0.209575 7_2:+78623204 Msa1079430:CDS
AATGGTAGCGTTGTTGATTT+TGG 0.215077 7_2:+78623156 Msa1079430:CDS
TTTGGTTACATGGTTTCTTA+TGG 0.235123 7_2:+78623860 Msa1079430:CDS
AAGAAGGAGAAGAGTGATTT+GGG 0.240150 7_2:+78623390 Msa1079430:CDS
GTTACGTATTCGTGTGTATT+AGG 0.253953 7_2:+78623558 Msa1079430:CDS
TGTACAACTAGTGGCATAAA+TGG 0.276171 7_2:+78624664 Msa1079430:CDS
AATTCCAAAGCCCCGGTTAA+TGG 0.298301 7_2:+78623138 Msa1079430:CDS
GTTCAACTACTGGTGTGGTT+TGG 0.305022 7_2:+78623625 Msa1079430:CDS
CAAGGCGACATAACCGAAAA+TGG 0.306788 7_2:-78623804 None:intergenic
GGCTTATGGATGGGTAATTA+TGG 0.315314 7_2:+78623527 Msa1079430:CDS
TTCAACTACTGGTGTGGTTT+GGG 0.319340 7_2:+78623626 Msa1079430:CDS
GAAGAAGGAGAAGAGTGATT+TGG 0.321434 7_2:+78623389 Msa1079430:CDS
TGTTGCTGATAATGGAATTA+GGG 0.322052 7_2:+78623212 Msa1079430:CDS
TGTGGATTTCTGGGTTGCTT+TGG 0.322485 7_2:+78623908 Msa1079430:CDS
CTTTCCCGTCTTGACCTTGC+CGG 0.324595 7_2:+78622943 Msa1079430:CDS
TATATTCTCTGTGGATTTCT+GGG 0.335772 7_2:+78623899 Msa1079430:CDS
TACCATGGAGGTTTACTTCA+TGG 0.347990 7_2:+78624103 Msa1079430:CDS
TGACACAGCTTGTGGGAATA+TGG 0.355268 7_2:+78623718 Msa1079430:CDS
AATCCCGAATCCAAAGAAAA+TGG 0.355440 7_2:-78623180 None:intergenic
AAGAGAAGATTAAGAGAGAT+AGG 0.357433 7_2:-78622846 None:intergenic
GCTACCATTAACCGGGGCTT+TGG 0.357458 7_2:-78623142 None:intergenic
GACGTTGTTCTTTGTTCTGT+TGG 0.360310 7_2:+78623491 Msa1079430:CDS
AGCAGCGTTAACAGCGTTAC+CGG 0.363800 7_2:-78622962 None:intergenic
TTTGATAAGGTGGGCTGTTA+GGG 0.367104 7_2:+78623689 Msa1079430:CDS
TCAGTTGTTAATGATCTTGT+AGG 0.382451 7_2:+78623594 Msa1079430:CDS
GGATTTCTGGGTTGCTTTGG+AGG 0.384827 7_2:+78623911 Msa1079430:CDS
TCAACAACGCTACCATTAAC+CGG 0.390385 7_2:-78623150 None:intergenic
CTTTATCTGTGGCTTATGGA+TGG 0.391262 7_2:+78623517 Msa1079430:CDS
CGGAGAAGAAATCATCATCT+AGG 0.397067 7_2:-78623080 None:intergenic
GAGTAGGGATGCCAATCAAC+AGG 0.400674 7_2:+78624157 Msa1079430:CDS
ACGTTGTTCTTTGTTCTGTT+GGG 0.429576 7_2:+78623492 Msa1079430:CDS
CGACGACGGCGAAGAGCAGC+TGG 0.432165 7_2:-78623027 None:intergenic
CGTTCTTTAAGCTATTTGTT+CGG 0.433372 7_2:+78623769 Msa1079430:CDS
ATGCCAATCAACAGGGTAGA+AGG 0.438658 7_2:+78624165 Msa1079430:CDS
CTAGATGATGATTTCTTCTC+CGG 0.439591 7_2:+78623081 Msa1079430:CDS
TGCTTGGAAGCTGTGCTTTG+TGG 0.441214 7_2:+78624017 Msa1079430:CDS
TTTCGCACCGTCGTTGAAAA+CGG 0.444607 7_2:+78622868 Msa1079430:CDS
TCGTTCTGGTATCACGTTGA+AGG 0.444992 7_2:+78623248 Msa1079430:CDS
AAACCTTCTACCCTGTTGAT+TGG 0.447704 7_2:-78624168 None:intergenic
TTTATCTGTGGCTTATGGAT+GGG 0.451680 7_2:+78623518 Msa1079430:CDS
AGGTTTACTTCATGGTTGCT+TGG 0.460321 7_2:+78624111 Msa1079430:CDS
AGAGGGAGAGGAAAAGAAGA+AGG 0.467869 7_2:+78623374 Msa1079430:CDS
AGATTAAGAGAGATAGGAAA+AGG 0.472898 7_2:-78622840 None:intergenic
CTGCGATGAGCGACCAACTA+CGG 0.472986 7_2:+78622743 None:intergenic
AGTAAGGAGATTGTGAAGGA+AGG 0.489890 7_2:+78623948 Msa1079430:CDS
GGAAGGTTTAGTTCAACTAC+TGG 0.504708 7_2:+78623615 Msa1079430:CDS
CATGGTAGACTGAAACATCT+TGG 0.507976 7_2:-78624087 None:intergenic
GAGAAGAGTGATTTGGGGAA+TGG 0.511026 7_2:+78623396 Msa1079430:CDS
ACGGGAAAGAAGAGATTTAA+CGG 0.513314 7_2:-78622929 None:intergenic
CGTTTCATTTCCTTCGTCGA+CGG 0.515738 7_2:+78622898 Msa1079430:CDS
ACACGAGTGAGATGAAGAAA+AGG 0.516134 7_2:-78623051 None:intergenic
TGCTTTGTGGATCGTTAATG+AGG 0.519695 7_2:+78624030 Msa1079430:CDS
GTAAGGAGATTGTGAAGGAA+GGG 0.524150 7_2:+78623949 Msa1079430:CDS
CAACAACGCTACCATTAACC+GGG 0.525960 7_2:-78623149 None:intergenic
CGGCGAAGAGCAGCTGGAGA+AGG 0.529976 7_2:-78623021 None:intergenic
GCACGTTGTGTAACCGTAGT+TGG 0.530006 7_2:-78622756 None:intergenic
GGCGGAAGATTCTGAAATTG+AGG 0.531545 7_2:+78623269 Msa1079430:CDS
TTTCTTCATCTCACTCGTGT+CGG 0.535665 7_2:+78623054 Msa1079430:CDS
AGGTAGTAAGGAGATTGTGA+AGG 0.545123 7_2:+78623944 Msa1079430:CDS
ACTACTGGTGTGGTTTGGGA+TGG 0.550541 7_2:+78623630 Msa1079430:CDS
CAGAAAAGCCTGATAAAACA+TGG 0.551031 7_2:-78623988 None:intergenic
GGATGCAGTGACACAGCTTG+TGG 0.553261 7_2:+78623710 Msa1079430:CDS
TCTGTTGGGTTCTTTATCTG+TGG 0.553319 7_2:+78623506 Msa1079430:CDS
GAAAGAAGAGATTTAACGGC+GGG 0.553372 7_2:-78622925 None:intergenic
TTCTGGTATCACGTTGAAGG+CGG 0.554633 7_2:+78623251 Msa1079430:CDS
GATGCAGTGACACAGCTTGT+GGG 0.555205 7_2:+78623711 Msa1079430:CDS
TCCATTATCAGCAACAAGAT+CGG 0.556064 7_2:-78623205 None:intergenic
TTCTCCGGTGATGATGATGA+TGG 0.557902 7_2:+78623096 Msa1079430:CDS
AAGGAATGTGAAGAGATTTG+AGG 0.560449 7_2:-78622821 None:intergenic
GTTACCGGCAAGGTCAAGAC+GGG 0.567998 7_2:-78622947 None:intergenic
GTTTAGTTCAACTACTGGTG+TGG 0.574767 7_2:+78623620 Msa1079430:CDS
GAAACTGAGAAGAACGTTGA+CGG 0.578836 7_2:-78622996 None:intergenic
CCGTCCATCATCATCATCAC+CGG 0.581846 7_2:-78623100 None:intergenic
CGTTAACAGCGTTACCGGCA+AGG 0.583355 7_2:-78622957 None:intergenic
GGAGAAGAAATCATCATCTA+GGG 0.584514 7_2:-78623079 None:intergenic
CGTTACCGGCAAGGTCAAGA+CGG 0.585212 7_2:-78622948 None:intergenic
TTGTTAATGATCTTGTAGGA+AGG 0.591111 7_2:+78623598 Msa1079430:CDS
GGCGGGATCGCCGTCGACGA+AGG 0.591405 7_2:-78622908 None:intergenic
TGGATCGAATTCCAAAGCCC+CGG 0.595939 7_2:+78623131 Msa1079430:CDS
AGAAGGAGAAGAGTGATTTG+GGG 0.609926 7_2:+78623391 Msa1079430:CDS
AACCATGAAGTAAACCTCCA+TGG 0.610271 7_2:-78624105 None:intergenic
TTCTCAAAACCAGTAACCCA+AGG 0.613465 7_2:-78623822 None:intergenic
TTTGTGGATCGTTAATGAGG+TGG 0.632821 7_2:+78624033 Msa1079430:CDS
GAGATTTGAGGTGAATGATG+AGG 0.634010 7_2:-78622809 None:intergenic
ATGTACAAGTGTACAACTAG+TGG 0.638951 7_2:+78624655 Msa1079430:CDS
CAAGATGTTTCAGTCTACCA+TGG 0.640369 7_2:+78624088 Msa1079430:CDS
TGTGACGTTTATATTCTCTG+TGG 0.646145 7_2:+78623890 Msa1079430:CDS
AGGTTTGAAGAGGATTTCTG+CGG 0.648624 7_2:+78623662 Msa1079430:CDS
GATGAAGAAAAGGACGACGA+CGG 0.656060 7_2:-78623041 None:intergenic
AGTAGGGATGCCAATCAACA+GGG 0.665230 7_2:+78624158 Msa1079430:CDS
GGACATCATCTACAAGAACA+AGG 0.666572 7_2:+78624685 Msa1079430:CDS
CCGGTGATGATGATGATGGA+CGG 0.666741 7_2:+78623100 Msa1079430:CDS
TTGTTTGAGAAGTTGTGCAG+TGG 0.672793 7_2:-78622782 None:intergenic
GATGTTTCAGTCTACCATGG+AGG 0.685865 7_2:+78624091 Msa1079430:CDS
AACAACGCTACCATTAACCG+GGG 0.705754 7_2:-78623148 None:intergenic
GACGAAGGAAATGAAACGTG+AGG 0.707332 7_2:-78622893 None:intergenic
GGAAAGAAGAGATTTAACGG+CGG 0.721458 7_2:-78622926 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTCAAATATTTGTGAA+TGG + chr7_2:78623444-78623463 Msa1079430:CDS 20.0%
!!! GATTTTCAAATATTTGTGAA+TGG + chr7_2:78623444-78623463 Msa1079430:CDS 20.0%
! TCTTGTGTATATTCTAAATG+AGG + chr7_2:78624420-78624439 Msa1079430:intron 25.0%
! TTTCTCAAACCTTGTAATTT+GGG - chr7_2:78624527-78624546 None:intergenic 25.0%
! ATTTCTCAAACCTTGTAATT+TGG - chr7_2:78624528-78624547 None:intergenic 25.0%
! TCTTGTGTATATTCTAAATG+AGG + chr7_2:78624420-78624439 Msa1079430:intron 25.0%
! TTTCTCAAACCTTGTAATTT+GGG - chr7_2:78624527-78624546 None:intergenic 25.0%
! ATTTCTCAAACCTTGTAATT+TGG - chr7_2:78624528-78624547 None:intergenic 25.0%
AGATTAAGAGAGATAGGAAA+AGG - chr7_2:78622843-78622862 None:intergenic 30.0%
AAGAGAAGATTAAGAGAGAT+AGG - chr7_2:78622849-78622868 None:intergenic 30.0%
!! TGATTTTGGTCCATTTTCTT+TGG + chr7_2:78623170-78623189 Msa1079430:CDS 30.0%
!! TTGTTGCTGATAATGGAATT+AGG + chr7_2:78623211-78623230 Msa1079430:CDS 30.0%
!! TGTTGCTGATAATGGAATTA+GGG + chr7_2:78623212-78623231 Msa1079430:CDS 30.0%
TCAGTTGTTAATGATCTTGT+AGG + chr7_2:78623594-78623613 Msa1079430:CDS 30.0%
TTGTTAATGATCTTGTAGGA+AGG + chr7_2:78623598-78623617 Msa1079430:CDS 30.0%
! GTTTTCAATTAGGTTTGAAG+AGG + chr7_2:78623652-78623671 Msa1079430:CDS 30.0%
! ATGGTATTTTGCTGAAATTG+AGG + chr7_2:78623737-78623756 Msa1079430:CDS 30.0%
CGTTCTTTAAGCTATTTGTT+CGG + chr7_2:78623769-78623788 Msa1079430:CDS 30.0%
!!! GTTGAAATTGATGCCATTTT+CGG + chr7_2:78623791-78623810 Msa1079430:CDS 30.0%
TTTGGTTACATGGTTTCTTA+TGG + chr7_2:78623860-78623879 Msa1079430:CDS 30.0%
TTATATTCTCTGTGGATTTC+TGG + chr7_2:78623898-78623917 Msa1079430:CDS 30.0%
TATATTCTCTGTGGATTTCT+GGG + chr7_2:78623899-78623918 Msa1079430:CDS 30.0%
!!! TTGGCTTGTGTTTTATTTTG+TGG + chr7_2:78624130-78624149 Msa1079430:CDS 30.0%
!!! TTTATTTTGTGGCTAAGAGT+AGG + chr7_2:78624141-78624160 Msa1079430:CDS 30.0%
!! TTATTTTGTGGCTAAGAGTA+GGG + chr7_2:78624142-78624161 Msa1079430:CDS 30.0%
! TTATTGTGCAGGTTTTTGAT+TGG + chr7_2:78624260-78624279 Msa1079430:intron 30.0%
!! TATTGTGCAGGTTTTTGATT+GGG + chr7_2:78624261-78624280 Msa1079430:intron 30.0%
ACTACATTCAACACATCTAA+TGG - chr7_2:78624379-78624398 None:intergenic 30.0%
CGACAAACAAAAATGCTATA+GGG - chr7_2:78624616-78624635 None:intergenic 30.0%
!! CCTATAGCATTTTTGTTTGT+CGG + chr7_2:78624614-78624633 Msa1079430:intron 30.0%
AGATTAAGAGAGATAGGAAA+AGG - chr7_2:78622843-78622862 None:intergenic 30.0%
AAGAGAAGATTAAGAGAGAT+AGG - chr7_2:78622849-78622868 None:intergenic 30.0%
!! TGATTTTGGTCCATTTTCTT+TGG + chr7_2:78623170-78623189 Msa1079430:CDS 30.0%
!! TTGTTGCTGATAATGGAATT+AGG + chr7_2:78623211-78623230 Msa1079430:CDS 30.0%
!! TGTTGCTGATAATGGAATTA+GGG + chr7_2:78623212-78623231 Msa1079430:CDS 30.0%
TCAGTTGTTAATGATCTTGT+AGG + chr7_2:78623594-78623613 Msa1079430:CDS 30.0%
TTGTTAATGATCTTGTAGGA+AGG + chr7_2:78623598-78623617 Msa1079430:CDS 30.0%
! GTTTTCAATTAGGTTTGAAG+AGG + chr7_2:78623652-78623671 Msa1079430:CDS 30.0%
! ATGGTATTTTGCTGAAATTG+AGG + chr7_2:78623737-78623756 Msa1079430:CDS 30.0%
CGTTCTTTAAGCTATTTGTT+CGG + chr7_2:78623769-78623788 Msa1079430:CDS 30.0%
!!! GTTGAAATTGATGCCATTTT+CGG + chr7_2:78623791-78623810 Msa1079430:CDS 30.0%
TTTGGTTACATGGTTTCTTA+TGG + chr7_2:78623860-78623879 Msa1079430:CDS 30.0%
TTATATTCTCTGTGGATTTC+TGG + chr7_2:78623898-78623917 Msa1079430:CDS 30.0%
TATATTCTCTGTGGATTTCT+GGG + chr7_2:78623899-78623918 Msa1079430:CDS 30.0%
!!! TTGGCTTGTGTTTTATTTTG+TGG + chr7_2:78624130-78624149 Msa1079430:CDS 30.0%
!!! TTTATTTTGTGGCTAAGAGT+AGG + chr7_2:78624141-78624160 Msa1079430:CDS 30.0%
!! TTATTTTGTGGCTAAGAGTA+GGG + chr7_2:78624142-78624161 Msa1079430:CDS 30.0%
! TTATTGTGCAGGTTTTTGAT+TGG + chr7_2:78624260-78624279 Msa1079430:intron 30.0%
!! TATTGTGCAGGTTTTTGATT+GGG + chr7_2:78624261-78624280 Msa1079430:intron 30.0%
ACTACATTCAACACATCTAA+TGG - chr7_2:78624379-78624398 None:intergenic 30.0%
CGACAAACAAAAATGCTATA+GGG - chr7_2:78624616-78624635 None:intergenic 30.0%
!! CCTATAGCATTTTTGTTTGT+CGG + chr7_2:78624614-78624633 Msa1079430:intron 30.0%
AAGGAATGTGAAGAGATTTG+AGG - chr7_2:78622824-78622843 None:intergenic 35.0%
ACGGGAAAGAAGAGATTTAA+CGG - chr7_2:78622932-78622951 None:intergenic 35.0%
GGAGAAGAAATCATCATCTA+GGG - chr7_2:78623082-78623101 None:intergenic 35.0%
CTAGATGATGATTTCTTCTC+CGG + chr7_2:78623081-78623100 Msa1079430:CDS 35.0%
!!! AATGGTAGCGTTGTTGATTT+TGG + chr7_2:78623156-78623175 Msa1079430:CDS 35.0%
! TGGTCCATTTTCTTTGGATT+CGG + chr7_2:78623176-78623195 Msa1079430:CDS 35.0%
AATCCCGAATCCAAAGAAAA+TGG - chr7_2:78623183-78623202 None:intergenic 35.0%
TCCATTATCAGCAACAAGAT+CGG - chr7_2:78623208-78623227 None:intergenic 35.0%
!! GTTTTTCAGATTGTTCGTTC+TGG + chr7_2:78623234-78623253 Msa1079430:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG + chr7_2:78623353-78623372 Msa1079430:CDS 35.0%
GAAGAAGAAGAAGAAGAAGA+GGG + chr7_2:78623354-78623373 Msa1079430:CDS 35.0%
AAGAAGGAGAAGAGTGATTT+GGG + chr7_2:78623390-78623409 Msa1079430:CDS 35.0%
ACGTTGTTCTTTGTTCTGTT+GGG + chr7_2:78623492-78623511 Msa1079430:CDS 35.0%
TTTATCTGTGGCTTATGGAT+GGG + chr7_2:78623518-78623537 Msa1079430:CDS 35.0%
GTTACGTATTCGTGTGTATT+AGG + chr7_2:78623558-78623577 Msa1079430:CDS 35.0%
!! GTTTGGGATGGTTTTCAATT+AGG + chr7_2:78623642-78623661 Msa1079430:CDS 35.0%
!!! TTTCTGCGGTTGTTTTGATA+AGG + chr7_2:78623676-78623695 Msa1079430:CDS 35.0%
!!! GTTTTGAGAAGGAGATTTCT+GGG + chr7_2:78623835-78623854 Msa1079430:CDS 35.0%
!!! TTTCTGGGTTTTTGGTTACA+TGG + chr7_2:78623850-78623869 Msa1079430:CDS 35.0%
TGTGACGTTTATATTCTCTG+TGG + chr7_2:78623890-78623909 Msa1079430:CDS 35.0%
! GTTGTCTTCCATGTTTTATC+AGG + chr7_2:78623980-78623999 Msa1079430:CDS 35.0%
CAGAAAAGCCTGATAAAACA+TGG - chr7_2:78623991-78624010 None:intergenic 35.0%
! GGCTTTTCTGATTAAATGCT+TGG + chr7_2:78624001-78624020 Msa1079430:CDS 35.0%
! ATCGTTAATGAGGTGGTTTT+TGG + chr7_2:78624040-78624059 Msa1079430:CDS 35.0%
AAATTGAGGGCTTAATCGAT+GGG + chr7_2:78624201-78624220 Msa1079430:intron 35.0%
!! AGATGATAATTTGCTGTGGT+TGG + chr7_2:78624227-78624246 Msa1079430:intron 35.0%
! AATCAGCTGCAATGTTTTAC+AGG + chr7_2:78624291-78624310 Msa1079430:CDS 35.0%
ATGACAAAACTACAGAATGG+TGG - chr7_2:78624355-78624374 None:intergenic 35.0%
!!! CAAGAACTATTTTAGCCTTG+AGG - chr7_2:78624405-78624424 None:intergenic 35.0%
! TGATTTTTCTCCATGCAACA+TGG + chr7_2:78624563-78624582 Msa1079430:intron 35.0%
ACATAAAACTCCATGTTGCA+TGG - chr7_2:78624576-78624595 None:intergenic 35.0%
CCGACAAACAAAAATGCTAT+AGG - chr7_2:78624617-78624636 None:intergenic 35.0%
ATGTACAAGTGTACAACTAG+TGG + chr7_2:78624655-78624674 Msa1079430:CDS 35.0%
TGTACAACTAGTGGCATAAA+TGG + chr7_2:78624664-78624683 Msa1079430:CDS 35.0%
AAGGAATGTGAAGAGATTTG+AGG - chr7_2:78622824-78622843 None:intergenic 35.0%
ACGGGAAAGAAGAGATTTAA+CGG - chr7_2:78622932-78622951 None:intergenic 35.0%
GGAGAAGAAATCATCATCTA+GGG - chr7_2:78623082-78623101 None:intergenic 35.0%
CTAGATGATGATTTCTTCTC+CGG + chr7_2:78623081-78623100 Msa1079430:CDS 35.0%
!!! AATGGTAGCGTTGTTGATTT+TGG + chr7_2:78623156-78623175 Msa1079430:CDS 35.0%
! TGGTCCATTTTCTTTGGATT+CGG + chr7_2:78623176-78623195 Msa1079430:CDS 35.0%
AATCCCGAATCCAAAGAAAA+TGG - chr7_2:78623183-78623202 None:intergenic 35.0%
TCCATTATCAGCAACAAGAT+CGG - chr7_2:78623208-78623227 None:intergenic 35.0%
!! GTTTTTCAGATTGTTCGTTC+TGG + chr7_2:78623234-78623253 Msa1079430:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG + chr7_2:78623353-78623372 Msa1079430:CDS 35.0%
GAAGAAGAAGAAGAAGAAGA+GGG + chr7_2:78623354-78623373 Msa1079430:CDS 35.0%
AAGAAGGAGAAGAGTGATTT+GGG + chr7_2:78623390-78623409 Msa1079430:CDS 35.0%
ACGTTGTTCTTTGTTCTGTT+GGG + chr7_2:78623492-78623511 Msa1079430:CDS 35.0%
TTTATCTGTGGCTTATGGAT+GGG + chr7_2:78623518-78623537 Msa1079430:CDS 35.0%
GTTACGTATTCGTGTGTATT+AGG + chr7_2:78623558-78623577 Msa1079430:CDS 35.0%
!! GTTTGGGATGGTTTTCAATT+AGG + chr7_2:78623642-78623661 Msa1079430:CDS 35.0%
!!! TTTCTGCGGTTGTTTTGATA+AGG + chr7_2:78623676-78623695 Msa1079430:CDS 35.0%
!!! GTTTTGAGAAGGAGATTTCT+GGG + chr7_2:78623835-78623854 Msa1079430:CDS 35.0%
!!! TTTCTGGGTTTTTGGTTACA+TGG + chr7_2:78623850-78623869 Msa1079430:CDS 35.0%
TGTGACGTTTATATTCTCTG+TGG + chr7_2:78623890-78623909 Msa1079430:CDS 35.0%
! GTTGTCTTCCATGTTTTATC+AGG + chr7_2:78623980-78623999 Msa1079430:CDS 35.0%
CAGAAAAGCCTGATAAAACA+TGG - chr7_2:78623991-78624010 None:intergenic 35.0%
! GGCTTTTCTGATTAAATGCT+TGG + chr7_2:78624001-78624020 Msa1079430:CDS 35.0%
! ATCGTTAATGAGGTGGTTTT+TGG + chr7_2:78624040-78624059 Msa1079430:CDS 35.0%
AAATTGAGGGCTTAATCGAT+GGG + chr7_2:78624201-78624220 Msa1079430:intron 35.0%
!! AGATGATAATTTGCTGTGGT+TGG + chr7_2:78624227-78624246 Msa1079430:intron 35.0%
! AATCAGCTGCAATGTTTTAC+AGG + chr7_2:78624291-78624310 Msa1079430:CDS 35.0%
ATGACAAAACTACAGAATGG+TGG - chr7_2:78624355-78624374 None:intergenic 35.0%
!!! CAAGAACTATTTTAGCCTTG+AGG - chr7_2:78624405-78624424 None:intergenic 35.0%
! TGATTTTTCTCCATGCAACA+TGG + chr7_2:78624563-78624582 Msa1079430:intron 35.0%
ACATAAAACTCCATGTTGCA+TGG - chr7_2:78624576-78624595 None:intergenic 35.0%
CCGACAAACAAAAATGCTAT+AGG - chr7_2:78624617-78624636 None:intergenic 35.0%
ATGTACAAGTGTACAACTAG+TGG + chr7_2:78624655-78624674 Msa1079430:CDS 35.0%
TGTACAACTAGTGGCATAAA+TGG + chr7_2:78624664-78624683 Msa1079430:CDS 35.0%
TTGTTTGAGAAGTTGTGCAG+TGG - chr7_2:78622785-78622804 None:intergenic 40.0%
! GAGATTTGAGGTGAATGATG+AGG - chr7_2:78622812-78622831 None:intergenic 40.0%
GAAAGAAGAGATTTAACGGC+GGG - chr7_2:78622928-78622947 None:intergenic 40.0%
GGAAAGAAGAGATTTAACGG+CGG - chr7_2:78622929-78622948 None:intergenic 40.0%
GAAACTGAGAAGAACGTTGA+CGG - chr7_2:78622999-78623018 None:intergenic 40.0%
ACACGAGTGAGATGAAGAAA+AGG - chr7_2:78623054-78623073 None:intergenic 40.0%
TTTCTTCATCTCACTCGTGT+CGG + chr7_2:78623054-78623073 Msa1079430:CDS 40.0%
CGGAGAAGAAATCATCATCT+AGG - chr7_2:78623083-78623102 None:intergenic 40.0%
TCAACAACGCTACCATTAAC+CGG - chr7_2:78623153-78623172 None:intergenic 40.0%
! GGTCCATTTTCTTTGGATTC+GGG + chr7_2:78623177-78623196 Msa1079430:CDS 40.0%
TCCGATCTTGTTGCTGATAA+TGG + chr7_2:78623204-78623223 Msa1079430:CDS 40.0%
GAAGAAGGAGAAGAGTGATT+TGG + chr7_2:78623389-78623408 Msa1079430:CDS 40.0%
AGAAGGAGAAGAGTGATTTG+GGG + chr7_2:78623391-78623410 Msa1079430:CDS 40.0%
GACGTTGTTCTTTGTTCTGT+TGG + chr7_2:78623491-78623510 Msa1079430:CDS 40.0%
TCTGTTGGGTTCTTTATCTG+TGG + chr7_2:78623506-78623525 Msa1079430:CDS 40.0%
GGTTCTTTATCTGTGGCTTA+TGG + chr7_2:78623513-78623532 Msa1079430:CDS 40.0%
CTTTATCTGTGGCTTATGGA+TGG + chr7_2:78623517-78623536 Msa1079430:CDS 40.0%
GGCTTATGGATGGGTAATTA+TGG + chr7_2:78623527-78623546 Msa1079430:CDS 40.0%
! GGAAGGTTTAGTTCAACTAC+TGG + chr7_2:78623615-78623634 Msa1079430:CDS 40.0%
! GTTTAGTTCAACTACTGGTG+TGG + chr7_2:78623620-78623639 Msa1079430:CDS 40.0%
TTCAACTACTGGTGTGGTTT+GGG + chr7_2:78623626-78623645 Msa1079430:CDS 40.0%
AGGTTTGAAGAGGATTTCTG+CGG + chr7_2:78623662-78623681 Msa1079430:CDS 40.0%
!!! TGCGGTTGTTTTGATAAGGT+GGG + chr7_2:78623680-78623699 Msa1079430:CDS 40.0%
!!! TTTTGATAAGGTGGGCTGTT+AGG + chr7_2:78623688-78623707 Msa1079430:CDS 40.0%
!! TTTGATAAGGTGGGCTGTTA+GGG + chr7_2:78623689-78623708 Msa1079430:CDS 40.0%
! ATTTTCGGTTATGTCGCCTT+GGG + chr7_2:78623806-78623825 Msa1079430:CDS 40.0%
TTCTCAAAACCAGTAACCCA+AGG - chr7_2:78623825-78623844 None:intergenic 40.0%
!!! TTGGGTTACTGGTTTTGAGA+AGG + chr7_2:78623824-78623843 Msa1079430:CDS 40.0%
!!! GGTTTTGAGAAGGAGATTTC+TGG + chr7_2:78623834-78623853 Msa1079430:CDS 40.0%
!! GAAGGAGATTTCTGGGTTTT+TGG + chr7_2:78623842-78623861 Msa1079430:CDS 40.0%
!! GGATTTTAGGAGAGGTAGTA+AGG + chr7_2:78623932-78623951 Msa1079430:CDS 40.0%
AGGTAGTAAGGAGATTGTGA+AGG + chr7_2:78623944-78623963 Msa1079430:CDS 40.0%
AGTAAGGAGATTGTGAAGGA+AGG + chr7_2:78623948-78623967 Msa1079430:CDS 40.0%
GTAAGGAGATTGTGAAGGAA+GGG + chr7_2:78623949-78623968 Msa1079430:CDS 40.0%
TGCTTTGTGGATCGTTAATG+AGG + chr7_2:78624030-78624049 Msa1079430:CDS 40.0%
TTTGTGGATCGTTAATGAGG+TGG + chr7_2:78624033-78624052 Msa1079430:CDS 40.0%
!!! TGGTTTTTGGCTCGAATTTG+CGG + chr7_2:78624053-78624072 Msa1079430:CDS 40.0%
CATGGTAGACTGAAACATCT+TGG - chr7_2:78624090-78624109 None:intergenic 40.0%
CAAGATGTTTCAGTCTACCA+TGG + chr7_2:78624088-78624107 Msa1079430:CDS 40.0%
TACCATGGAGGTTTACTTCA+TGG + chr7_2:78624103-78624122 Msa1079430:CDS 40.0%
AACCATGAAGTAAACCTCCA+TGG - chr7_2:78624108-78624127 None:intergenic 40.0%
AGGTTTACTTCATGGTTGCT+TGG + chr7_2:78624111-78624130 Msa1079430:CDS 40.0%
AAACCTTCTACCCTGTTGAT+TGG - chr7_2:78624171-78624190 None:intergenic 40.0%
AATCAACAGGGTAGAAGGTT+TGG + chr7_2:78624170-78624189 Msa1079430:intron 40.0%
ATCAACAGGGTAGAAGGTTT+GGG + chr7_2:78624171-78624190 Msa1079430:intron 40.0%
GAAATTGAGGGCTTAATCGA+TGG + chr7_2:78624200-78624219 Msa1079430:intron 40.0%
!! GCACAGATGATAATTTGCTG+TGG + chr7_2:78624223-78624242 Msa1079430:intron 40.0%
! AAACTACAGAATGGTGGTGA+TGG - chr7_2:78624349-78624368 None:intergenic 40.0%
GGCATGACAAAACTACAGAA+TGG - chr7_2:78624358-78624377 None:intergenic 40.0%
AAATAGCGCACACAATGTGT+TGG + chr7_2:78624477-78624496 Msa1079430:intron 40.0%
GTCTGTAGTCCCAAATTACA+AGG + chr7_2:78624515-78624534 Msa1079430:intron 40.0%
GGACATCATCTACAAGAACA+AGG + chr7_2:78624685-78624704 Msa1079430:CDS 40.0%
TTGTTTGAGAAGTTGTGCAG+TGG - chr7_2:78622785-78622804 None:intergenic 40.0%
! GAGATTTGAGGTGAATGATG+AGG - chr7_2:78622812-78622831 None:intergenic 40.0%
GAAAGAAGAGATTTAACGGC+GGG - chr7_2:78622928-78622947 None:intergenic 40.0%
GGAAAGAAGAGATTTAACGG+CGG - chr7_2:78622929-78622948 None:intergenic 40.0%
GAAACTGAGAAGAACGTTGA+CGG - chr7_2:78622999-78623018 None:intergenic 40.0%
ACACGAGTGAGATGAAGAAA+AGG - chr7_2:78623054-78623073 None:intergenic 40.0%
TTTCTTCATCTCACTCGTGT+CGG + chr7_2:78623054-78623073 Msa1079430:CDS 40.0%
CGGAGAAGAAATCATCATCT+AGG - chr7_2:78623083-78623102 None:intergenic 40.0%
TCAACAACGCTACCATTAAC+CGG - chr7_2:78623153-78623172 None:intergenic 40.0%
! GGTCCATTTTCTTTGGATTC+GGG + chr7_2:78623177-78623196 Msa1079430:CDS 40.0%
TCCGATCTTGTTGCTGATAA+TGG + chr7_2:78623204-78623223 Msa1079430:CDS 40.0%
GAAGAAGGAGAAGAGTGATT+TGG + chr7_2:78623389-78623408 Msa1079430:CDS 40.0%
AGAAGGAGAAGAGTGATTTG+GGG + chr7_2:78623391-78623410 Msa1079430:CDS 40.0%
GACGTTGTTCTTTGTTCTGT+TGG + chr7_2:78623491-78623510 Msa1079430:CDS 40.0%
TCTGTTGGGTTCTTTATCTG+TGG + chr7_2:78623506-78623525 Msa1079430:CDS 40.0%
GGTTCTTTATCTGTGGCTTA+TGG + chr7_2:78623513-78623532 Msa1079430:CDS 40.0%
CTTTATCTGTGGCTTATGGA+TGG + chr7_2:78623517-78623536 Msa1079430:CDS 40.0%
GGCTTATGGATGGGTAATTA+TGG + chr7_2:78623527-78623546 Msa1079430:CDS 40.0%
! GGAAGGTTTAGTTCAACTAC+TGG + chr7_2:78623615-78623634 Msa1079430:CDS 40.0%
! GTTTAGTTCAACTACTGGTG+TGG + chr7_2:78623620-78623639 Msa1079430:CDS 40.0%
TTCAACTACTGGTGTGGTTT+GGG + chr7_2:78623626-78623645 Msa1079430:CDS 40.0%
AGGTTTGAAGAGGATTTCTG+CGG + chr7_2:78623662-78623681 Msa1079430:CDS 40.0%
!!! TGCGGTTGTTTTGATAAGGT+GGG + chr7_2:78623680-78623699 Msa1079430:CDS 40.0%
!!! TTTTGATAAGGTGGGCTGTT+AGG + chr7_2:78623688-78623707 Msa1079430:CDS 40.0%
!! TTTGATAAGGTGGGCTGTTA+GGG + chr7_2:78623689-78623708 Msa1079430:CDS 40.0%
! ATTTTCGGTTATGTCGCCTT+GGG + chr7_2:78623806-78623825 Msa1079430:CDS 40.0%
TTCTCAAAACCAGTAACCCA+AGG - chr7_2:78623825-78623844 None:intergenic 40.0%
!!! TTGGGTTACTGGTTTTGAGA+AGG + chr7_2:78623824-78623843 Msa1079430:CDS 40.0%
!!! GGTTTTGAGAAGGAGATTTC+TGG + chr7_2:78623834-78623853 Msa1079430:CDS 40.0%
!! GAAGGAGATTTCTGGGTTTT+TGG + chr7_2:78623842-78623861 Msa1079430:CDS 40.0%
!! GGATTTTAGGAGAGGTAGTA+AGG + chr7_2:78623932-78623951 Msa1079430:CDS 40.0%
AGGTAGTAAGGAGATTGTGA+AGG + chr7_2:78623944-78623963 Msa1079430:CDS 40.0%
AGTAAGGAGATTGTGAAGGA+AGG + chr7_2:78623948-78623967 Msa1079430:CDS 40.0%
GTAAGGAGATTGTGAAGGAA+GGG + chr7_2:78623949-78623968 Msa1079430:CDS 40.0%
TGCTTTGTGGATCGTTAATG+AGG + chr7_2:78624030-78624049 Msa1079430:CDS 40.0%
TTTGTGGATCGTTAATGAGG+TGG + chr7_2:78624033-78624052 Msa1079430:CDS 40.0%
!!! TGGTTTTTGGCTCGAATTTG+CGG + chr7_2:78624053-78624072 Msa1079430:CDS 40.0%
CATGGTAGACTGAAACATCT+TGG - chr7_2:78624090-78624109 None:intergenic 40.0%
CAAGATGTTTCAGTCTACCA+TGG + chr7_2:78624088-78624107 Msa1079430:CDS 40.0%
TACCATGGAGGTTTACTTCA+TGG + chr7_2:78624103-78624122 Msa1079430:CDS 40.0%
AACCATGAAGTAAACCTCCA+TGG - chr7_2:78624108-78624127 None:intergenic 40.0%
AGGTTTACTTCATGGTTGCT+TGG + chr7_2:78624111-78624130 Msa1079430:CDS 40.0%
AAACCTTCTACCCTGTTGAT+TGG - chr7_2:78624171-78624190 None:intergenic 40.0%
AATCAACAGGGTAGAAGGTT+TGG + chr7_2:78624170-78624189 Msa1079430:intron 40.0%
ATCAACAGGGTAGAAGGTTT+GGG + chr7_2:78624171-78624190 Msa1079430:intron 40.0%
GAAATTGAGGGCTTAATCGA+TGG + chr7_2:78624200-78624219 Msa1079430:intron 40.0%
!! GCACAGATGATAATTTGCTG+TGG + chr7_2:78624223-78624242 Msa1079430:intron 40.0%
! AAACTACAGAATGGTGGTGA+TGG - chr7_2:78624349-78624368 None:intergenic 40.0%
GGCATGACAAAACTACAGAA+TGG - chr7_2:78624358-78624377 None:intergenic 40.0%
AAATAGCGCACACAATGTGT+TGG + chr7_2:78624477-78624496 Msa1079430:intron 40.0%
GTCTGTAGTCCCAAATTACA+AGG + chr7_2:78624515-78624534 Msa1079430:intron 40.0%
GGACATCATCTACAAGAACA+AGG + chr7_2:78624685-78624704 Msa1079430:CDS 40.0%
TTTCGCACCGTCGTTGAAAA+CGG + chr7_2:78622868-78622887 Msa1079430:CDS 45.0%
!!! TGAGGTACCGTTTTCAACGA+CGG - chr7_2:78622878-78622897 None:intergenic 45.0%
GACGAAGGAAATGAAACGTG+AGG - chr7_2:78622896-78622915 None:intergenic 45.0%
CGTTTCATTTCCTTCGTCGA+CGG + chr7_2:78622898-78622917 Msa1079430:CDS 45.0%
GATGAAGAAAAGGACGACGA+CGG - chr7_2:78623044-78623063 None:intergenic 45.0%
! TTCTCCGGTGATGATGATGA+TGG + chr7_2:78623096-78623115 Msa1079430:CDS 45.0%
!!! GATGATGGACGGACTCTTTT+TGG + chr7_2:78623111-78623130 Msa1079430:CDS 45.0%
AATTCCAAAGCCCCGGTTAA+TGG + chr7_2:78623138-78623157 Msa1079430:CDS 45.0%
AACAACGCTACCATTAACCG+GGG - chr7_2:78623151-78623170 None:intergenic 45.0%
CAACAACGCTACCATTAACC+GGG - chr7_2:78623152-78623171 None:intergenic 45.0%
TCGTTCTGGTATCACGTTGA+AGG + chr7_2:78623248-78623267 Msa1079430:CDS 45.0%
TTCTGGTATCACGTTGAAGG+CGG + chr7_2:78623251-78623270 Msa1079430:CDS 45.0%
!! GGCGGAAGATTCTGAAATTG+AGG + chr7_2:78623269-78623288 Msa1079430:CDS 45.0%
AGAAGAAGAAGAAGAGGGAG+AGG + chr7_2:78623362-78623381 Msa1079430:CDS 45.0%
AGAGGGAGAGGAAAAGAAGA+AGG + chr7_2:78623374-78623393 Msa1079430:CDS 45.0%
! GAGAAGAGTGATTTGGGGAA+TGG + chr7_2:78623396-78623415 Msa1079430:CDS 45.0%
GTTCAACTACTGGTGTGGTT+TGG + chr7_2:78623625-78623644 Msa1079430:CDS 45.0%
!!! CTGCGGTTGTTTTGATAAGG+TGG + chr7_2:78623679-78623698 Msa1079430:CDS 45.0%
TGACACAGCTTGTGGGAATA+TGG + chr7_2:78623718-78623737 Msa1079430:CDS 45.0%
CAAGGCGACATAACCGAAAA+TGG - chr7_2:78623807-78623826 None:intergenic 45.0%
! CATTTTCGGTTATGTCGCCT+TGG + chr7_2:78623805-78623824 Msa1079430:CDS 45.0%
! TGTGGATTTCTGGGTTGCTT+TGG + chr7_2:78623908-78623927 Msa1079430:CDS 45.0%
!!! GGGTTGCTTTGGAGGATTTT+AGG + chr7_2:78623919-78623938 Msa1079430:CDS 45.0%
!!! GCTTTGGAGGATTTTAGGAG+AGG + chr7_2:78623924-78623943 Msa1079430:CDS 45.0%
!!! GGTTTTTGGCTCGAATTTGC+GGG + chr7_2:78624054-78624073 Msa1079430:CDS 45.0%
GATGTTTCAGTCTACCATGG+AGG + chr7_2:78624091-78624110 Msa1079430:CDS 45.0%
AGTAGGGATGCCAATCAACA+GGG + chr7_2:78624158-78624177 Msa1079430:CDS 45.0%
ATGCCAATCAACAGGGTAGA+AGG + chr7_2:78624165-78624184 Msa1079430:CDS 45.0%
TTTGGGCAGAGGGAAATTGA+GGG + chr7_2:78624188-78624207 Msa1079430:intron 45.0%
!! ATTTGCTGTGGTTGGATCGA+CGG + chr7_2:78624235-78624254 Msa1079430:intron 45.0%
!!! GATCGACGGTTTTATTGTGC+AGG + chr7_2:78624249-78624268 Msa1079430:intron 45.0%
GTTGAATGTAGTTCGCCTCA+AGG + chr7_2:78624387-78624406 Msa1079430:intron 45.0%
! GCACACAATGTGTTGGTGAA+TGG + chr7_2:78624484-78624503 Msa1079430:intron 45.0%
TTTCGCACCGTCGTTGAAAA+CGG + chr7_2:78622868-78622887 Msa1079430:CDS 45.0%
!!! TGAGGTACCGTTTTCAACGA+CGG - chr7_2:78622878-78622897 None:intergenic 45.0%
GACGAAGGAAATGAAACGTG+AGG - chr7_2:78622896-78622915 None:intergenic 45.0%
CGTTTCATTTCCTTCGTCGA+CGG + chr7_2:78622898-78622917 Msa1079430:CDS 45.0%
GATGAAGAAAAGGACGACGA+CGG - chr7_2:78623044-78623063 None:intergenic 45.0%
! TTCTCCGGTGATGATGATGA+TGG + chr7_2:78623096-78623115 Msa1079430:CDS 45.0%
!!! GATGATGGACGGACTCTTTT+TGG + chr7_2:78623111-78623130 Msa1079430:CDS 45.0%
AATTCCAAAGCCCCGGTTAA+TGG + chr7_2:78623138-78623157 Msa1079430:CDS 45.0%
AACAACGCTACCATTAACCG+GGG - chr7_2:78623151-78623170 None:intergenic 45.0%
CAACAACGCTACCATTAACC+GGG - chr7_2:78623152-78623171 None:intergenic 45.0%
TCGTTCTGGTATCACGTTGA+AGG + chr7_2:78623248-78623267 Msa1079430:CDS 45.0%
TTCTGGTATCACGTTGAAGG+CGG + chr7_2:78623251-78623270 Msa1079430:CDS 45.0%
!! GGCGGAAGATTCTGAAATTG+AGG + chr7_2:78623269-78623288 Msa1079430:CDS 45.0%
AGAAGAAGAAGAAGAGGGAG+AGG + chr7_2:78623362-78623381 Msa1079430:CDS 45.0%
AGAGGGAGAGGAAAAGAAGA+AGG + chr7_2:78623374-78623393 Msa1079430:CDS 45.0%
! GAGAAGAGTGATTTGGGGAA+TGG + chr7_2:78623396-78623415 Msa1079430:CDS 45.0%
GTTCAACTACTGGTGTGGTT+TGG + chr7_2:78623625-78623644 Msa1079430:CDS 45.0%
!!! CTGCGGTTGTTTTGATAAGG+TGG + chr7_2:78623679-78623698 Msa1079430:CDS 45.0%
TGACACAGCTTGTGGGAATA+TGG + chr7_2:78623718-78623737 Msa1079430:CDS 45.0%
CAAGGCGACATAACCGAAAA+TGG - chr7_2:78623807-78623826 None:intergenic 45.0%
! CATTTTCGGTTATGTCGCCT+TGG + chr7_2:78623805-78623824 Msa1079430:CDS 45.0%
! TGTGGATTTCTGGGTTGCTT+TGG + chr7_2:78623908-78623927 Msa1079430:CDS 45.0%
!!! GGGTTGCTTTGGAGGATTTT+AGG + chr7_2:78623919-78623938 Msa1079430:CDS 45.0%
!!! GCTTTGGAGGATTTTAGGAG+AGG + chr7_2:78623924-78623943 Msa1079430:CDS 45.0%
!!! GGTTTTTGGCTCGAATTTGC+GGG + chr7_2:78624054-78624073 Msa1079430:CDS 45.0%
GATGTTTCAGTCTACCATGG+AGG + chr7_2:78624091-78624110 Msa1079430:CDS 45.0%
AGTAGGGATGCCAATCAACA+GGG + chr7_2:78624158-78624177 Msa1079430:CDS 45.0%
ATGCCAATCAACAGGGTAGA+AGG + chr7_2:78624165-78624184 Msa1079430:CDS 45.0%
TTTGGGCAGAGGGAAATTGA+GGG + chr7_2:78624188-78624207 Msa1079430:intron 45.0%
!! ATTTGCTGTGGTTGGATCGA+CGG + chr7_2:78624235-78624254 Msa1079430:intron 45.0%
!!! GATCGACGGTTTTATTGTGC+AGG + chr7_2:78624249-78624268 Msa1079430:intron 45.0%
GTTGAATGTAGTTCGCCTCA+AGG + chr7_2:78624387-78624406 Msa1079430:intron 45.0%
! GCACACAATGTGTTGGTGAA+TGG + chr7_2:78624484-78624503 Msa1079430:intron 45.0%
GCACGTTGTGTAACCGTAGT+TGG - chr7_2:78622759-78622778 None:intergenic 50.0%
AGCAGCGTTAACAGCGTTAC+CGG - chr7_2:78622965-78622984 None:intergenic 50.0%
CCGTCCATCATCATCATCAC+CGG - chr7_2:78623103-78623122 None:intergenic 50.0%
!! CCGGTGATGATGATGATGGA+CGG + chr7_2:78623100-78623119 Msa1079430:CDS 50.0%
TGGATCGAATTCCAAAGCCC+CGG + chr7_2:78623131-78623150 Msa1079430:CDS 50.0%
! ACTACTGGTGTGGTTTGGGA+TGG + chr7_2:78623630-78623649 Msa1079430:CDS 50.0%
GATGCAGTGACACAGCTTGT+GGG + chr7_2:78623711-78623730 Msa1079430:CDS 50.0%
GTTATGTCGCCTTGGGTTAC+TGG + chr7_2:78623813-78623832 Msa1079430:CDS 50.0%
! GGATTTCTGGGTTGCTTTGG+AGG + chr7_2:78623911-78623930 Msa1079430:CDS 50.0%
TGCTTGGAAGCTGTGCTTTG+TGG + chr7_2:78624017-78624036 Msa1079430:CDS 50.0%
GAGTAGGGATGCCAATCAAC+AGG + chr7_2:78624157-78624176 Msa1079430:CDS 50.0%
GTTTGGGCAGAGGGAAATTG+AGG + chr7_2:78624187-78624206 Msa1079430:intron 50.0%
CCAACAGCGACTGCAAAAGT+AGG - chr7_2:78624326-78624345 None:intergenic 50.0%
!! CCTACTTTTGCAGTCGCTGT+TGG + chr7_2:78624323-78624342 Msa1079430:intron 50.0%
GCACGTTGTGTAACCGTAGT+TGG - chr7_2:78622759-78622778 None:intergenic 50.0%
AGCAGCGTTAACAGCGTTAC+CGG - chr7_2:78622965-78622984 None:intergenic 50.0%
CCGTCCATCATCATCATCAC+CGG - chr7_2:78623103-78623122 None:intergenic 50.0%
!! CCGGTGATGATGATGATGGA+CGG + chr7_2:78623100-78623119 Msa1079430:CDS 50.0%
TGGATCGAATTCCAAAGCCC+CGG + chr7_2:78623131-78623150 Msa1079430:CDS 50.0%
! ACTACTGGTGTGGTTTGGGA+TGG + chr7_2:78623630-78623649 Msa1079430:CDS 50.0%
GATGCAGTGACACAGCTTGT+GGG + chr7_2:78623711-78623730 Msa1079430:CDS 50.0%
GTTATGTCGCCTTGGGTTAC+TGG + chr7_2:78623813-78623832 Msa1079430:CDS 50.0%
! GGATTTCTGGGTTGCTTTGG+AGG + chr7_2:78623911-78623930 Msa1079430:CDS 50.0%
TGCTTGGAAGCTGTGCTTTG+TGG + chr7_2:78624017-78624036 Msa1079430:CDS 50.0%
GAGTAGGGATGCCAATCAAC+AGG + chr7_2:78624157-78624176 Msa1079430:CDS 50.0%
GTTTGGGCAGAGGGAAATTG+AGG + chr7_2:78624187-78624206 Msa1079430:intron 50.0%
CCAACAGCGACTGCAAAAGT+AGG - chr7_2:78624326-78624345 None:intergenic 50.0%
!! CCTACTTTTGCAGTCGCTGT+TGG + chr7_2:78624323-78624342 Msa1079430:intron 50.0%
CTTTCCCGTCTTGACCTTGC+CGG + chr7_2:78622943-78622962 Msa1079430:CDS 55.0%
GTTACCGGCAAGGTCAAGAC+GGG - chr7_2:78622950-78622969 None:intergenic 55.0%
CGTTACCGGCAAGGTCAAGA+CGG - chr7_2:78622951-78622970 None:intergenic 55.0%
CGTTAACAGCGTTACCGGCA+AGG - chr7_2:78622960-78622979 None:intergenic 55.0%
GCTACCATTAACCGGGGCTT+TGG - chr7_2:78623145-78623164 None:intergenic 55.0%
GGATGCAGTGACACAGCTTG+TGG + chr7_2:78623710-78623729 Msa1079430:CDS 55.0%
AGGGTAGAAGGTTTGGGCAG+AGG + chr7_2:78624177-78624196 Msa1079430:intron 55.0%
GGGTAGAAGGTTTGGGCAGA+GGG + chr7_2:78624178-78624197 Msa1079430:intron 55.0%
CTTTCCCGTCTTGACCTTGC+CGG + chr7_2:78622943-78622962 Msa1079430:CDS 55.0%
GTTACCGGCAAGGTCAAGAC+GGG - chr7_2:78622950-78622969 None:intergenic 55.0%
CGTTACCGGCAAGGTCAAGA+CGG - chr7_2:78622951-78622970 None:intergenic 55.0%
CGTTAACAGCGTTACCGGCA+AGG - chr7_2:78622960-78622979 None:intergenic 55.0%
GCTACCATTAACCGGGGCTT+TGG - chr7_2:78623145-78623164 None:intergenic 55.0%
GGATGCAGTGACACAGCTTG+TGG + chr7_2:78623710-78623729 Msa1079430:CDS 55.0%
AGGGTAGAAGGTTTGGGCAG+AGG + chr7_2:78624177-78624196 Msa1079430:intron 55.0%
GGGTAGAAGGTTTGGGCAGA+GGG + chr7_2:78624178-78624197 Msa1079430:intron 55.0%
CGGCGAAGAGCAGCTGGAGA+AGG - chr7_2:78623024-78623043 None:intergenic 65.0%
CGGCGAAGAGCAGCTGGAGA+AGG - chr7_2:78623024-78623043 None:intergenic 65.0%
CGACGACGGCGAAGAGCAGC+TGG - chr7_2:78623030-78623049 None:intergenic 70.0%
CGACGACGGCGAAGAGCAGC+TGG - chr7_2:78623030-78623049 None:intergenic 70.0%
GGCGGGATCGCCGTCGACGA+AGG - chr7_2:78622911-78622930 None:intergenic 75.0%
GGCGGGATCGCCGTCGACGA+AGG - chr7_2:78622911-78622930 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 78622748 78624765 78622748 ID=Msa1079430;Name=Msa1079430
chr7_2 mRNA 78622748 78624765 78622748 ID=Msa1079430-mRNA-1;Parent=Msa1079430;Name=Msa1079430-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0.5|0.33|3|0|534
chr7_2 exon 78622748 78624186 78622748 ID=Msa1079430-mRNA-1:exon:19558;Parent=Msa1079430-mRNA-1
chr7_2 exon 78624271 78624312 78624271 ID=Msa1079430-mRNA-1:exon:19559;Parent=Msa1079430-mRNA-1
chr7_2 exon 78624642 78624765 78624642 ID=Msa1079430-mRNA-1:exon:19560;Parent=Msa1079430-mRNA-1
chr7_2 CDS 78622748 78624186 78622748 ID=Msa1079430-mRNA-1:cds;Parent=Msa1079430-mRNA-1
chr7_2 CDS 78624271 78624312 78624271 ID=Msa1079430-mRNA-1:cds;Parent=Msa1079430-mRNA-1
chr7_2 CDS 78624642 78624765 78624642 ID=Msa1079430-mRNA-1:cds;Parent=Msa1079430-mRNA-1
Gene Sequence

>Msa1079430

ATGAGCGACCAACTACGGTTACACAACGTGCGTTCCACTGCACAACTTCTCAAACAAGCAACCTCATCATTCACCTCAAATCTCTTCACATTCCTTTTCCTATCTCTCTTAATCTTCTCTTTTCGCACCGTCGTTGAAAACGGTACCTCACGTTTCATTTCCTTCGTCGACGGCGATCCCGCCGTTAAATCTCTTCTTTCCCGTCTTGACCTTGCCGGTAACGCTGTTAACGCTGCTAATTATCAACACCGTCAACGTTCTTCTCAGTTTCATCCTTCTCCAGCTGCTCTTCGCCGTCGTCGTCCTTTTCTTCATCTCACTCGTGTCGGAACCCTAGATGATGATTTCTTCTCCGGTGATGATGATGATGGACGGACTCTTTTTGGATCGAATTCCAAAGCCCCGGTTAATGGTAGCGTTGTTGATTTTGGTCCATTTTCTTTGGATTCGGGATTCTCCGATCTTGTTGCTGATAATGGAATTAGGGTTTTTCAGATTGTTCGTTCTGGTATCACGTTGAAGGCGGAAGATTCTGAAATTGAGGTAGAAAAAAACGAGAATGATGATAAAGATATTGATGATGAGAAAGATAAAAAGAAAAAGAAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGAGGAAAAGAAGAAGGAGAAGAGTGATTTGGGGAATGGAAAAGAAGAGAAAGTAAAAAGTGTTGATTTTCAAATATTTGTGAATGGAATTGAGATAAGTCGTCGCGATACGACGTTGTTCTTTGTTCTGTTGGGTTCTTTATCTGTGGCTTATGGATGGGTAATTATGGTTTTTCTTGTTACGTATTCGTGTGTATTAGGTGTTGTTGTTGTTTCAGTTGTTAATGATCTTGTAGGAAGGTTTAGTTCAACTACTGGTGTGGTTTGGGATGGTTTTCAATTAGGTTTGAAGAGGATTTCTGCGGTTGTTTTGATAAGGTGGGCTGTTAGGGATGCAGTGACACAGCTTGTGGGAATATGGTATTTTGCTGAAATTGAGGATCAATTTTCGTTCTTTAAGCTATTTGTTCGGTTGAAATTGATGCCATTTTCGGTTATGTCGCCTTGGGTTACTGGTTTTGAGAAGGAGATTTCTGGGTTTTTGGTTACATGGTTTCTTATGGATACATTTGTGACGTTTATATTCTCTGTGGATTTCTGGGTTGCTTTGGAGGATTTTAGGAGAGGTAGTAAGGAGATTGTGAAGGAAGGGTGTTATTTGTTGTCTTCCATGTTTTATCAGGCTTTTCTGATTAAATGCTTGGAAGCTGTGCTTTGTGGATCGTTAATGAGGTGGTTTTTGGCTCGAATTTGCGGGAGAGTTTTTGCCAAGATGTTTCAGTCTACCATGGAGGTTTACTTCATGGTTGCTTGGCTTGTGTTTTATTTTGTGGCTAAGAGTAGGGATGCCAATCAACAGGGTAGAAGGTTTTTGATTGGGAATGCACAATCAGCTGCAATGTTTTACAGTATTATATTTTGTATGTACAAGTGTACAACTAGTGGCATAAATGGACATCATCTACAAGAACAAGGAAATGCACTTGAATCTGCAAGAACTTGCAAAATTGTTGTGAGTTGTTTCTCTTTTTAG

Protein sequence

>Msa1079430

MSDQLRLHNVRSTAQLLKQATSSFTSNLFTFLFLSLLIFSFRTVVENGTSRFISFVDGDPAVKSLLSRLDLAGNAVNAANYQHRQRSSQFHPSPAALRRRRPFLHLTRVGTLDDDFFSGDDDDGRTLFGSNSKAPVNGSVVDFGPFSLDSGFSDLVADNGIRVFQIVRSGITLKAEDSEIEVEKNENDDKDIDDEKDKKKKKEEEEEEEEGEEKKKEKSDLGNGKEEKVKSVDFQIFVNGIEISRRDTTLFFVLLGSLSVAYGWVIMVFLVTYSCVLGVVVVSVVNDLVGRFSSTTGVVWDGFQLGLKRISAVVLIRWAVRDAVTQLVGIWYFAEIEDQFSFFKLFVRLKLMPFSVMSPWVTGFEKEISGFLVTWFLMDTFVTFIFSVDFWVALEDFRRGSKEIVKEGCYLLSSMFYQAFLIKCLEAVLCGSLMRWFLARICGRVFAKMFQSTMEVYFMVAWLVFYFVAKSRDANQQGRRFLIGNAQSAAMFYSIIFCMYKCTTSGINGHHLQEQGNALESARTCKIVVSCFSF*