AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1272770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1272770 MtrunA17_Chr8g0338051 88.690 336 21 5 1 331 1 324 0.0 541
Msa1272770 MtrunA17_Chr4g0009941 30.216 278 144 10 67 325 2 248 6.05e-26 103
Msa1272770 MtrunA17_Chr7g0238901 30.000 280 142 10 67 325 76 322 8.30e-24 99.8
Msa1272770 MtrunA17_Chr4g0034391 33.493 209 100 9 63 248 70 262 2.50e-19 89.0
Msa1272770 MtrunA17_Chr4g0064601 30.651 261 147 10 69 325 56 286 1.33e-14 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1272770 AT4G31530.1 76.136 264 54 1 67 330 69 323 2.28e-137 393
Msa1272770 AT4G31530.2 72.302 278 54 2 67 330 69 337 1.49e-133 384
Msa1272770 AT2G37660.1 31.502 273 133 11 74 325 79 318 2.62e-25 104
Msa1272770 AT5G02240.1 28.938 273 140 10 74 325 7 246 8.22e-23 95.9
Msa1272770 AT3G18890.1 31.890 254 125 11 73 306 83 308 4.17e-21 94.7
Msa1272770 AT2G34460.1 31.939 263 145 11 71 329 46 278 2.28e-20 89.7
Msa1272770 AT4G18810.1 25.424 177 102 5 45 202 103 268 7.38e-11 63.5

Find 199 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGAAAGTGGTTTCAATTT+TGG 0.080038 8_3:+6487529 Msa1272760:CDS
TTTAACTAACTCCTTGTAAA+TGG 0.124595 8_3:-6487350 Msa1272770:three_prime_UTR
TGATTCTTACCAACTCTTTC+TGG 0.132930 8_3:+6490738 None:intergenic
GAGATTGGATTGTTGTAATT+AGG 0.157177 8_3:+6493049 None:intergenic
CAGAGTTAACTTCGTATATT+TGG 0.162981 8_3:+6489712 None:intergenic
AGCCAAGTTGAGTGAATTTC+AGG 0.164430 8_3:+6488926 Msa1272760:CDS
CGTAGCATTATGAACCTATT+TGG 0.182500 8_3:-6490175 Msa1272770:CDS
TATACTTCTTCATTCATTAT+TGG 0.199218 8_3:-6489316 Msa1272770:three_prime_UTR
ATGAAACAAGTGCTTATAAT+TGG 0.199667 8_3:+6489245 None:intergenic
CTAATGGCAGCTACTCTAAA+TGG 0.209076 8_3:+6488960 Msa1272760:CDS
TGAATATAAACTTCTTATTC+AGG 0.212644 8_3:-6489289 Msa1272770:three_prime_UTR
AAAGACCATATTTGATTCTT+TGG 0.213929 8_3:+6487507 Msa1272760:CDS
GCAGCTTCACGCAGCTTAAT+TGG 0.215913 8_3:-6488891 Msa1272770:three_prime_UTR
TCCAAACTTGTCCTTGTTCT+TGG 0.216236 8_3:-6492908 Msa1272770:CDS
TCTTACCTAATTATAGTATA+TGG 0.230550 8_3:+6490100 None:intergenic
GCTTTCCATATACTATAATT+AGG 0.245017 8_3:-6490105 Msa1272770:intron
GAAGTAGAAGATTGGGAGAT+TGG 0.258492 8_3:+6493034 None:intergenic
GAGGAATTTCTTCAGAATTC+TGG 0.258581 8_3:-6490127 Msa1272770:CDS
TAATCACTTTCAGGAGTCTT+AGG 0.258854 8_3:+6487816 Msa1272760:intron
AGTTTGATAGGCTTGGTGTT+AGG 0.272913 8_3:+6488173 Msa1272760:CDS
AGATTGGATTGTTGTAATTA+GGG 0.273367 8_3:+6493050 None:intergenic
GTCCTTGTTCTTGGTGGTTC+AGG 0.275808 8_3:-6492899 Msa1272770:CDS
GGTCCATCTGTCAACCTTCC+AGG 0.296760 8_3:+6489991 None:intergenic
CCGGAAATCAACGGTGTTAT+CGG 0.302126 8_3:+6487052 Msa1272760:CDS
CACTTCTGAGCATCATTTCC+AGG 0.302200 8_3:+6489457 None:intergenic
CATTCAAGTTTAAGTTTGAT+AGG 0.308178 8_3:+6488161 Msa1272760:CDS
GAATGGGTTTAAACCGGATT+TGG 0.310000 8_3:+6487324 Msa1272760:CDS
ACAGTATTGCATGAACCTTC+TGG 0.317360 8_3:+6488327 Msa1272760:intron
TGGATGGAATGACCTGGGTC+TGG 0.321021 8_3:-6487154 Msa1272770:three_prime_UTR
AATATCTTCTTCACAGTTGC+TGG 0.331916 8_3:-6488387 Msa1272770:three_prime_UTR
CAACGGCGAGCAGTGCTTAT+AGG 0.332728 8_3:-6489922 Msa1272770:CDS
CACAAGGAAGCATGATGATT+TGG 0.333240 8_3:-6490999 Msa1272770:CDS
TTCACGCAGCTTAATTGGTT+CGG 0.335996 8_3:-6488886 Msa1272770:three_prime_UTR
GCAATTTATATGCATCATAT+AGG 0.343736 8_3:-6489365 Msa1272770:three_prime_UTR
AAATTTGCTCGTAAATATCT+TGG 0.347281 8_3:-6487174 Msa1272770:three_prime_UTR
GTTTGATAGGCTTGGTGTTA+GGG 0.353707 8_3:+6488174 Msa1272760:CDS
CACGTTTAGAAGTAGAAGAT+TGG 0.355319 8_3:+6493026 None:intergenic
ATTGTTGTAATTAGGGAGTT+TGG 0.356898 8_3:+6493057 None:intergenic
GTTATTCTTGTATCATCAAT+AGG 0.359072 8_3:-6490524 Msa1272770:CDS
TGTTCTATCACCACGTAGTT+TGG 0.360785 8_3:-6487911 Msa1272770:three_prime_UTR
TTAAGTTGCGCTTGATACTT+AGG 0.362138 8_3:-6491384 Msa1272770:CDS
TTGTAAATGGGTACCAAATC+CGG 0.372687 8_3:-6487337 Msa1272770:three_prime_UTR
ATAGATAAATTTCATGAATA+CGG 0.372867 8_3:+6487851 Msa1272760:CDS
TGTACTTCAAGACACCAAAT+AGG 0.374552 8_3:+6490161 None:intergenic
ACCAAGAACAAGGACAAGTT+TGG 0.379863 8_3:+6492907 None:intergenic
CACATAGAGCCGGTTTGGTT+GGG 0.381130 8_3:-6487419 Msa1272770:three_prime_UTR
GAGAAAGCCAAGACACTGTT+TGG 0.384195 8_3:-6491355 Msa1272770:CDS
TCACGCAGCTTAATTGGTTC+GGG 0.385896 8_3:-6488885 Msa1272770:three_prime_UTR
TACTTGTGTAAGTTGAATAA+TGG 0.389821 8_3:-6493137 Msa1272770:exon
TCAGGAAGAATTGGTACTAA+TGG 0.390432 8_3:+6488944 Msa1272760:CDS
CATCTGATTCCAACTCCAAC+CGG 0.396127 8_3:+6487098 Msa1272760:CDS
TAATGGCAGCTACTCTAAAT+GGG 0.399582 8_3:+6488961 Msa1272760:CDS
TTGGAATCAGATGTGAAGAT+TGG 0.400334 8_3:-6487088 Msa1272770:three_prime_UTR
TTAACTAACTCCTTGTAAAT+GGG 0.404427 8_3:-6487349 Msa1272770:three_prime_UTR
TGTGAGAAAGCAAAGCAAAA+TGG 0.408525 8_3:+6489086 Msa1272760:CDS
AAACTTGTCCTTGTTCTTGG+TGG 0.409074 8_3:-6492905 Msa1272770:CDS
TCATCATCCCACCGCCTTGA+AGG 0.413160 8_3:+6490768 None:intergenic
GAGTGAATTTCAGGAAGAAT+TGG 0.418836 8_3:+6488935 Msa1272760:CDS
ATGATGATGAGGGAATGTTT+TGG 0.419623 8_3:+6492933 None:intergenic
CAATTTATATGCATCATATA+GGG 0.425634 8_3:-6489364 Msa1272770:three_prime_UTR
ACGTTTAGAAGTAGAAGATT+GGG 0.426305 8_3:+6493027 None:intergenic
TGAACGAAGCCATCCATCAT+TGG 0.427002 8_3:-6487241 Msa1272770:three_prime_UTR
CGGTTTGGTTGGGTTGATGC+GGG 0.430268 8_3:-6487409 Msa1272770:three_prime_UTR
GGATGGAATGACCTGGGTCT+GGG 0.430844 8_3:-6487153 Msa1272770:three_prime_UTR
GTGGACTGCTTAAAGTTAGA+AGG 0.434355 8_3:-6488464 Msa1272770:three_prime_UTR
CATGTTCTCGATCAACTTCT+CGG 0.440999 8_3:-6489006 Msa1272770:three_prime_UTR
TGGAATCAGATGTGAAGATT+GGG 0.441253 8_3:-6487087 Msa1272770:three_prime_UTR
TTCAAGAAGCATTGTGAAGA+AGG 0.442527 8_3:+6487881 Msa1272760:CDS
GCTGCTGAGGCTTCGCTCCA+TGG 0.449801 8_3:-6487205 Msa1272770:three_prime_UTR
CCGGTTTGGTTGGGTTGATG+CGG 0.452888 8_3:-6487410 Msa1272770:three_prime_UTR
CTATCAAACTTAAACTTGAA+TGG 0.453816 8_3:-6488160 Msa1272770:three_prime_UTR
GATGGATGATCGTCATTTCC+AGG 0.457508 8_3:-6487959 Msa1272770:three_prime_UTR
GAATGCACATAGAGCCGGTT+TGG 0.457660 8_3:-6487424 Msa1272770:three_prime_UTR
ATGTTTCAGGGTGAAGGTCC+TGG 0.459105 8_3:-6489475 Msa1272770:intron
TTCCTGAAATTCACTCAACT+TGG 0.460240 8_3:-6488928 Msa1272770:three_prime_UTR
GGTTATGAATGGGTTTAAAC+CGG 0.462487 8_3:+6487318 Msa1272760:CDS
GCACATAGAGCCGGTTTGGT+TGG 0.465169 8_3:-6487420 Msa1272770:three_prime_UTR
CCTAGTCCAGATGACATTGT+TGG 0.467798 8_3:+6488130 Msa1272760:CDS
ATGACAGAGGCGGTTATGAA+TGG 0.467859 8_3:+6487307 Msa1272760:CDS
ATTTCTCCATGGATTGAGCC+AGG 0.471335 8_3:+6488211 Msa1272760:CDS
TTGTGATCGTTGGTTCGCTT+CGG 0.472288 8_3:+6487384 Msa1272760:CDS
CAACCATCTTTATTTCTCCA+TGG 0.477130 8_3:+6488200 Msa1272760:CDS
TGCATGGGCTGGAACATTTG+AGG 0.477714 8_3:+6488440 Msa1272760:CDS
GAATTGAACCCGGTTGGAGT+TGG 0.479110 8_3:-6487107 Msa1272770:three_prime_UTR
TTCGTCCAAAGAATCAAATA+TGG 0.479274 8_3:-6487512 Msa1272770:three_prime_UTR
TTTGGATCCATCCATGTTTG+AGG 0.480502 8_3:-6490981 Msa1272770:intron
TAAGTTGCGCTTGATACTTA+GGG 0.482644 8_3:-6491383 Msa1272770:CDS
TCAGGACCAACAATGTCATC+TGG 0.490161 8_3:-6488136 Msa1272770:three_prime_UTR
CTTGGTGGTTCAGGCGGTGT+TGG 0.490175 8_3:-6492890 Msa1272770:intron
AAACCGGCTCTATGTGCATT+CGG 0.490673 8_3:+6487426 Msa1272760:CDS
TGACAGAGGCGGTTATGAAT+GGG 0.491337 8_3:+6487308 Msa1272760:CDS
AAGTTTAAGTTTGATAGGCT+TGG 0.491369 8_3:+6488166 Msa1272760:CDS
CCATGGATTGAGCCAGGAAA+AGG 0.492155 8_3:+6488217 Msa1272760:CDS
ACAAAGAGGGATGCATGGGC+TGG 0.493354 8_3:+6488429 Msa1272760:CDS
ACATTACTCAAAGCAACAGC+TGG 0.493897 8_3:-6489946 Msa1272770:CDS
AACTTAAACTTGAATGGCTC+AGG 0.493924 8_3:-6488154 Msa1272770:three_prime_UTR
TAGATAAATTTCATGAATAC+GGG 0.494752 8_3:+6487852 Msa1272760:CDS
GTCTTGAAGTACAAGAAGAT+GGG 0.495045 8_3:-6490151 Msa1272770:CDS
TTGTTCACCAAACAGTGTCT+TGG 0.499030 8_3:+6491348 None:intergenic
TTCAGCAACCACAATTCTAC+TGG 0.500117 8_3:+6489773 None:intergenic
CCATGGCAATTCATTACACT+TGG 0.500166 8_3:+6490496 None:intergenic
TTACGATCACGTGCCAATGC+CGG 0.500603 8_3:+6488096 Msa1272760:CDS
ATTAGGTATGCTTACCTCCA+TGG 0.503084 8_3:+6490479 None:intergenic
GAAGTGTATGAAACATTAAG+AGG 0.503321 8_3:+6488016 Msa1272760:CDS
AATGACACAAATAAGCTCAT+TGG 0.504718 8_3:+6487472 Msa1272760:CDS
GGAACTCCGTCCACCGGCAT+TGG 0.505974 8_3:-6488109 Msa1272770:three_prime_UTR
AGTTTGCGGTTTGTGATCGT+TGG 0.508199 8_3:+6487374 Msa1272760:CDS
CCGCATCAACCCAACCAAAC+CGG 0.508661 8_3:+6487410 Msa1272760:CDS
GAATGCTCATATTGTGATGT+TGG 0.517660 8_3:-6488357 Msa1272770:three_prime_UTR
TCATATTGTGATGTTGGAAA+TGG 0.518175 8_3:-6488351 Msa1272770:three_prime_UTR
TTGCTCGTAAATATCTTGGA+TGG 0.518777 8_3:-6487170 Msa1272770:three_prime_UTR
GCATGGGCTGGAACATTTGA+GGG 0.521357 8_3:+6488441 Msa1272760:CDS
TTTGATTCTTTGGACGAAAG+TGG 0.521512 8_3:+6487517 Msa1272760:CDS
GTGCATTCGGCCACGTCACA+TGG 0.523053 8_3:+6487439 Msa1272760:CDS
TTCGACTTGTTATCAATACC+TGG 0.526979 8_3:+6487941 Msa1272760:CDS
TGTCTTGAAGTACAAGAAGA+TGG 0.527274 8_3:-6490152 Msa1272770:CDS
GGATTTGGTACCCATTTACA+AGG 0.528252 8_3:+6487339 Msa1272760:CDS
CTTCTTCATTCATTATTGGA+AGG 0.529566 8_3:-6489312 Msa1272770:three_prime_UTR
GAATATAAACTTCTTATTCA+GGG 0.530107 8_3:-6489288 Msa1272770:three_prime_UTR
GGAGTTAGTTAAAGAGTTTG+CGG 0.531901 8_3:+6487360 Msa1272760:CDS
CATGGAGAAATAAAGATGGT+TGG 0.536049 8_3:-6488199 Msa1272770:three_prime_UTR
TTTGACAAAGAGGGATGCAT+GGG 0.538347 8_3:+6488425 Msa1272760:CDS
TTGAGATCATAAGACGTGTA+TGG 0.539437 8_3:+6489970 None:intergenic
CTGGGTCAACGTAGATTGAC+TGG 0.540860 8_3:-6487135 Msa1272770:three_prime_UTR
AGAAGCAGTTAAATATGTTG+AGG 0.543269 8_3:+6489037 Msa1272760:CDS
TTACCTGGACAATCAGTTCG+TGG 0.546945 8_3:-6488483 Msa1272770:intron
CGCCTGAACCACCAAGAACA+AGG 0.551133 8_3:+6492897 None:intergenic
TATTTATTTGAAGATTGGGT+GGG 0.551280 8_3:-6490590 Msa1272770:intron
GCAAAGCAAAATGGAGCTGA+TGG 0.552812 8_3:+6489095 Msa1272760:CDS
ACTCATGTGATTTGCTGCAC+AGG 0.557364 8_3:-6490804 Msa1272770:CDS
GATTATTCACCACCGATCAC+AGG 0.558474 8_3:-6489201 Msa1272770:three_prime_UTR
CATTAAGAGGCAGTCCGCAA+TGG 0.560504 8_3:+6488029 Msa1272760:CDS
ATGTTCTCGATCAACTTCTC+GGG 0.561429 8_3:-6489005 Msa1272770:three_prime_UTR
AAGAAAGAGAGTGAAACTGA+AGG 0.561600 8_3:+6493101 None:intergenic
GACACAAATAAGCTCATTGG+AGG 0.561936 8_3:+6487475 Msa1272760:CDS
CACGTGCCAATGCCGGTGGA+CGG 0.563655 8_3:+6488103 Msa1272760:CDS
GGTTGCTGAAGCTTGCGTAC+AGG 0.566427 8_3:-6489760 Msa1272770:CDS
AAGAACAAGGACAAGTTTGG+AGG 0.567335 8_3:+6492910 None:intergenic
AAGTTTGGAGGATGATGATG+AGG 0.568899 8_3:+6492922 None:intergenic
GTCACTGAATTGAACCCGGT+TGG 0.569195 8_3:-6487113 Msa1272770:three_prime_UTR
AGACCTGGAAGGTTGACAGA+TGG 0.569259 8_3:-6489994 Msa1272770:CDS
CCAACAATGTCATCTGGACT+AGG 0.569750 8_3:-6488130 Msa1272770:three_prime_UTR
ATGCATATGTTTCAGGGTGA+AGG 0.572654 8_3:-6489481 Msa1272770:intron
GATCATCCATCTCACGATGT+AGG 0.573106 8_3:+6487971 Msa1272760:CDS
TGTAATTAGGGAGTTTGGTG+AGG 0.574655 8_3:+6493062 None:intergenic
TGAATATGATAGGTATTCAA+AGG 0.574682 8_3:-6491025 Msa1272770:intron
TCAAGAAGCATTGTGAAGAA+GGG 0.578757 8_3:+6487882 Msa1272760:CDS
AATCCATGGAGAAATAAAGA+TGG 0.580843 8_3:-6488203 Msa1272770:three_prime_UTR
GAAAATACACCAGAAAGAGT+TGG 0.580873 8_3:-6490747 Msa1272770:intron
TTATTTATTTGAAGATTGGG+TGG 0.582766 8_3:-6490591 Msa1272770:intron
GAGTTTACCTCAAACATGGA+TGG 0.585827 8_3:+6490974 None:intergenic
CGATCACGTGCCAATGCCGG+TGG 0.586750 8_3:+6488099 Msa1272760:CDS
TGAAGAGTTTACCTCAAACA+TGG 0.589358 8_3:+6490970 None:intergenic
CCTTCTCCTACATCGTGAGA+TGG 0.589412 8_3:-6487977 Msa1272770:three_prime_UTR
CGAGCAGTGCTTATAGGTCA+AGG 0.592563 8_3:-6489916 Msa1272770:intron
ATCTACGTTGACCCAGACCC+AGG 0.594366 8_3:+6487142 Msa1272760:CDS
TGGCCGAATGCACATAGAGC+CGG 0.596503 8_3:-6487429 Msa1272770:three_prime_UTR
AGTTTGGAGGATGATGATGA+GGG 0.596908 8_3:+6492923 None:intergenic
CTTGTTCTTGGTGGTTCAGG+CGG 0.597608 8_3:-6492896 Msa1272770:CDS
GAAGTGGCAAGAATTATTTG+TGG 0.603707 8_3:-6489440 Msa1272770:CDS
AAGTTGCCTCCAATGATGGA+TGG 0.606133 8_3:+6487232 Msa1272760:CDS
ATACGAAGTTAACTCTGTTG+AGG 0.606565 8_3:-6489706 Msa1272770:intron
CTGGAAATGATGCTCAGAAG+TGG 0.606575 8_3:-6489456 Msa1272770:CDS
ATCTGATTCCAACTCCAACC+GGG 0.609764 8_3:+6487099 Msa1272760:CDS
TCAAAGCAACAGCTGGGCAA+CGG 0.612805 8_3:-6489939 Msa1272770:CDS
CCATCTCACGATGTAGGAGA+AGG 0.613581 8_3:+6487977 Msa1272760:CDS
TCCCTCAACCCGGAAATCAA+CGG 0.618124 8_3:+6487043 Msa1272760:CDS
ACAAGATGAAGAGAAACTGC+AGG 0.619181 8_3:-6491329 Msa1272770:intron
TCTTGAAGTACAAGAAGATG+GGG 0.623108 8_3:-6490150 Msa1272770:CDS
ATATCTTGGATGGAATGACC+TGG 0.623346 8_3:-6487160 Msa1272770:three_prime_UTR
GTGATTACTTACGATGAACA+TGG 0.625748 8_3:+6488067 Msa1272760:CDS
AACAACATTTCATTCCATTG+CGG 0.629018 8_3:-6488043 Msa1272770:three_prime_UTR
GGACTAGGAACTCCGTCCAC+CGG 0.630848 8_3:-6488115 Msa1272770:three_prime_UTR
CTTTCAGGAGATAAACTAGT+GGG 0.632068 8_3:-6489801 Msa1272770:intron
ACGAAGCCATCCATCATTGG+AGG 0.636218 8_3:-6487238 Msa1272770:three_prime_UTR
AACAAACCTGTAGAAAAGGG+TGG 0.636809 8_3:-6487575 Msa1272770:intron
AACCTGTAGAAAAGGGTGGA+TGG 0.641177 8_3:-6487571 Msa1272770:intron
TATCTTGGATGGAATGACCT+GGG 0.641424 8_3:-6487159 Msa1272770:three_prime_UTR
CATTACTCAAAGCAACAGCT+GGG 0.641871 8_3:-6489945 Msa1272770:CDS
CCAAGTGTAATGAATTGCCA+TGG 0.645224 8_3:-6490496 Msa1272770:CDS
TTGTAGCATCACTGCTTCAG+CGG 0.646030 8_3:-6491411 Msa1272770:CDS
GCTAGTTAAGCCATGTGACG+TGG 0.653066 8_3:-6487449 Msa1272770:three_prime_UTR
GATGTTGGAAATGGTCCAGA+AGG 0.664520 8_3:-6488342 Msa1272770:three_prime_UTR
CTTGTATAACCTGTGATCGG+TGG 0.668023 8_3:+6489192 Msa1272760:CDS
AATGGCAGCTACTCTAAATG+GGG 0.671594 8_3:+6488962 Msa1272760:CDS
TGTCTTGTATAACCTGTGAT+CGG 0.673075 8_3:+6489189 Msa1272760:CDS
ACACAAATAAGCTCATTGGA+GGG 0.674023 8_3:+6487476 Msa1272760:CDS
AGTGTAATGAATTGCCATGG+AGG 0.674948 8_3:-6490493 Msa1272770:intron
GGGTGAAGCCAGTAGAATTG+TGG 0.678142 8_3:-6489781 Msa1272770:CDS
AGGTATTCAAAGGAGACACA+AGG 0.686371 8_3:-6491015 Msa1272770:CDS
ACTGGTCACTGAATTGAACC+CGG 0.689925 8_3:-6487117 Msa1272770:three_prime_UTR
GCTTTCAGGAGATAAACTAG+TGG 0.695591 8_3:-6489802 Msa1272770:intron
GACAGTGACAATGACAGAGG+CGG 0.712697 8_3:+6487297 Msa1272760:CDS
CGCGACAGTGACAATGACAG+AGG 0.712747 8_3:+6487294 Msa1272760:CDS
ATTACTTACGATGAACATGG+AGG 0.726286 8_3:+6488070 Msa1272760:CDS
CTTGAAGTACAAGAAGATGG+GGG 0.735141 8_3:-6490149 Msa1272770:CDS
CTGTAGAAAAGGGTGGATGG+TGG 0.748685 8_3:-6487568 Msa1272770:intron
GCTTCGTTCAAAATGCAGCG+AGG 0.769826 8_3:+6487254 Msa1272760:CDS
AGGGAAATTACCAAACTACG+TGG 0.780325 8_3:+6487901 Msa1272760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACAATATGTAAATATTT+CGG + chr8_3:6487754-6487773 Msa1272760:intron 10.0%
!!! ATTTTTATTTATTTGAAGAT+TGG - chr8_3:6489632-6489651 Msa1272770:intron 10.0%
!!! TTTTTATTTATTTGAAGATT+GGG - chr8_3:6489633-6489652 Msa1272770:intron 10.0%
!!! ACAAAAAATTAAGAATTTTA+CGG + chr8_3:6490641-6490660 None:intergenic 10.0%
!!! TATAATTTTATATACCTTTT+GGG + chr8_3:6491663-6491682 None:intergenic 10.0%
!!! TTATAATTTTATATACCTTT+TGG + chr8_3:6491664-6491683 None:intergenic 10.0%
!! AAATATTTGAAGATTGAAAT+AGG - chr8_3:6487976-6487995 Msa1272770:three_prime_UTR 15.0%
!! TAATTATAAAAATATTTCGG+TGG - chr8_3:6488301-6488320 Msa1272770:intron 15.0%
!! AATTATAAAAATATTTCGGT+GGG - chr8_3:6488302-6488321 Msa1272770:intron 15.0%
!!! AAATGCATTTTAAATATATG+AGG + chr8_3:6490212-6490231 None:intergenic 15.0%
!! ATAGATAAATTTCATGAATA+CGG + chr8_3:6492379-6492398 None:intergenic 15.0%
!!! TAATTTTCACTTCATTAAAA+TGG - chr8_3:6492561-6492580 Msa1272770:intron 15.0%
!! ATTTGATACAAGATATTATA+AGG - chr8_3:6492613-6492632 Msa1272770:intron 15.0%
!!! TTTGATTTTGAATTTGCTTT+AGG - chr8_3:6487468-6487487 Msa1272770:three_prime_UTR 20.0%
!! TTACGATGATTAAAATCAAA+TGG - chr8_3:6487816-6487835 Msa1272770:intron 20.0%
!! TCTAATAAGCTAATTTATAG+AGG - chr8_3:6488252-6488271 Msa1272770:intron 20.0%
!! TGCATAAAATAACACTAAAA+AGG + chr8_3:6488687-6488706 Msa1272760:intron 20.0%
!!! TCATCAGTATTGTTTTTATT+TGG - chr8_3:6489313-6489332 Msa1272770:three_prime_UTR 20.0%
!! TAAACTGAGAACTAATTATT+AGG + chr8_3:6489768-6489787 None:intergenic 20.0%
!!! GCATTTATTGATTTAAGATT+CGG - chr8_3:6489885-6489904 Msa1272770:intron 20.0%
!!! ATGTAAACTATGTTGATAAA+TGG - chr8_3:6489994-6490013 Msa1272770:CDS 20.0%
!! TCTTACCTAATTATAGTATA+TGG + chr8_3:6490130-6490149 None:intergenic 20.0%
!! TTAAATATATGAGGAGATTT+CGG + chr8_3:6490203-6490222 None:intergenic 20.0%
!! TAGGTATATATAGTTATACA+TGG - chr8_3:6490570-6490589 Msa1272770:CDS 20.0%
!! CAATTTATATGCATCATATA+GGG - chr8_3:6490863-6490882 Msa1272770:intron 20.0%
!! TATACTTCTTCATTCATTAT+TGG - chr8_3:6490911-6490930 Msa1272770:intron 20.0%
!! TGAATATAAACTTCTTATTC+AGG - chr8_3:6490938-6490957 Msa1272770:intron 20.0%
!! GAATATAAACTTCTTATTCA+GGG - chr8_3:6490939-6490958 Msa1272770:intron 20.0%
!!! TGAAAGAAATTTTTGGAATT+GGG - chr8_3:6491069-6491088 Msa1272770:intron 20.0%
!!! ACAAATATTGATATTTTACC+TGG - chr8_3:6491729-6491748 Msa1272770:intron 20.0%
!! TAGATAAATTTCATGAATAC+GGG + chr8_3:6492378-6492397 None:intergenic 20.0%
!! TAATTCTATTAATCACTTTC+AGG + chr8_3:6492423-6492442 None:intergenic 20.0%
!! TACTTGTGTAAGTTGAATAA+TGG - chr8_3:6487090-6487109 Msa1272770:three_prime_UTR 25.0%
! AGATTGGATTGTTGTAATTA+GGG + chr8_3:6487180-6487199 Msa1272760:CDS 25.0%
! TGAATTACAAATGAAAGAGA+AGG + chr8_3:6487385-6487404 Msa1272760:CDS 25.0%
! AATCAAACTAATTTCACTCA+AGG + chr8_3:6487455-6487474 Msa1272760:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+CGG + chr8_3:6487498-6487517 Msa1272760:CDS 25.0%
! ATAAGTTGTTTATCCAAACA+TGG + chr8_3:6488017-6488036 Msa1272760:CDS 25.0%
!!! AGATACTAGTGATACTTTTT+GGG + chr8_3:6488216-6488235 Msa1272760:CDS 25.0%
!! TAGATACTAGTGATACTTTT+TGG + chr8_3:6488217-6488236 Msa1272760:CDS 25.0%
! AATAGTATTAACAACCTTGT+TGG - chr8_3:6488626-6488645 Msa1272770:intron 25.0%
!! TTGACTTGACTTAATATTCA+GGG - chr8_3:6488786-6488805 Msa1272770:intron 25.0%
! TGAATATGATAGGTATTCAA+AGG - chr8_3:6489202-6489221 Msa1272770:three_prime_UTR 25.0%
! CAATTTACCATATATTCTCT+TGG + chr8_3:6489357-6489376 None:intergenic 25.0%
! CAAGAGAATATATGGTAAAT+TGG - chr8_3:6489355-6489374 Msa1272770:three_prime_UTR 25.0%
! TGCATATATATTGCAGATTT+CGG - chr8_3:6489517-6489536 Msa1272770:intron 25.0%
! TTATTTATTTGAAGATTGGG+TGG - chr8_3:6489636-6489655 Msa1272770:intron 25.0%
! TATTTATTTGAAGATTGGGT+GGG - chr8_3:6489637-6489656 Msa1272770:intron 25.0%
! GTTATTCTTGTATCATCAAT+AGG - chr8_3:6489703-6489722 Msa1272770:intron 25.0%
! GCTTTCCATATACTATAATT+AGG - chr8_3:6490122-6490141 Msa1272770:CDS 25.0%
! TAAATATATGAGGAGATTTC+GGG + chr8_3:6490202-6490221 None:intergenic 25.0%
!!! TTTAAAATGCATTTTAGACC+TGG - chr8_3:6490218-6490237 Msa1272770:intron 25.0%
! AATTATGCGATGAACATTAT+TGG + chr8_3:6490341-6490360 None:intergenic 25.0%
!!! AGCAAAAACACTTTTAGAAA+AGG + chr8_3:6490381-6490400 None:intergenic 25.0%
!! AAGTGTTAGAAATTTTGTGA+CGG - chr8_3:6490403-6490422 Msa1272770:intron 25.0%
!!! TCAGTGGTAATTTTGTTTTT+AGG - chr8_3:6490551-6490570 Msa1272770:CDS 25.0%
!!! TTGATTCTATAATGGGATTT+TGG + chr8_3:6490616-6490635 None:intergenic 25.0%
!!! TACGGTTTTGATTCTATAAT+GGG + chr8_3:6490623-6490642 None:intergenic 25.0%
!!! TTACGGTTTTGATTCTATAA+TGG + chr8_3:6490624-6490643 None:intergenic 25.0%
! TTAGTTTAAGAATCAAATGC+AGG - chr8_3:6490686-6490705 Msa1272770:intron 25.0%
! GCAATTTATATGCATCATAT+AGG - chr8_3:6490862-6490881 Msa1272770:intron 25.0%
! ATGAAACAAGTGCTTATAAT+TGG + chr8_3:6490985-6491004 None:intergenic 25.0%
!! CATCTTGTGAAAGAAATTTT+TGG - chr8_3:6491062-6491081 Msa1272770:intron 25.0%
!!! GTGAAAGAAATTTTTGGAAT+TGG - chr8_3:6491068-6491087 Msa1272770:intron 25.0%
! TACACAGATTAATCATAACA+TGG + chr8_3:6491935-6491954 None:intergenic 25.0%
!! CATTCAAGTTTAAGTTTGAT+AGG + chr8_3:6492069-6492088 None:intergenic 25.0%
! CTATCAAACTTAAACTTGAA+TGG - chr8_3:6492067-6492086 Msa1272770:intron 25.0%
! CAAAAATTTAGAGAGAAACT+TGG + chr8_3:6492524-6492543 None:intergenic 25.0%
! GACGTTAATCTATATTACAA+AGG - chr8_3:6492583-6492602 Msa1272770:intron 25.0%
! GATATTATAAGGTACGAAAA+TGG - chr8_3:6492624-6492643 Msa1272770:intron 25.0%
! AAAGACCATATTTGATTCTT+TGG + chr8_3:6492723-6492742 None:intergenic 25.0%
! TTTAACTAACTCCTTGTAAA+TGG - chr8_3:6492877-6492896 Msa1272770:intron 25.0%
! TTAACTAACTCCTTGTAAAT+GGG - chr8_3:6492878-6492897 Msa1272770:intron 25.0%
!! GATATTTACGAGCAAATTTT+TGG + chr8_3:6493052-6493071 None:intergenic 25.0%
!! AAATTTGCTCGTAAATATCT+TGG - chr8_3:6493053-6493072 Msa1272770:CDS 25.0%
ATTGTTGTAATTAGGGAGTT+TGG + chr8_3:6487173-6487192 Msa1272760:CDS 30.0%
GAGATTGGATTGTTGTAATT+AGG + chr8_3:6487181-6487200 Msa1272760:CDS 30.0%
ACGTTTAGAAGTAGAAGATT+GGG + chr8_3:6487203-6487222 Msa1272760:CDS 30.0%
AAGGAAGAAGAATGAATGAA+TGG + chr8_3:6487366-6487385 Msa1272760:CDS 30.0%
TGAAACATTAAGAACCTGTT+TGG + chr8_3:6487729-6487748 Msa1272760:intron 30.0%
TCAAACATTTATGCCATGTT+TGG - chr8_3:6488001-6488020 Msa1272770:three_prime_UTR 30.0%
ATAAGCTCTTTCAATAACAC+AGG - chr8_3:6488066-6488085 Msa1272770:three_prime_UTR 30.0%
! TGTTTTCATAAGTTACCCTA+AGG - chr8_3:6488128-6488147 Msa1272770:three_prime_UTR 30.0%
ATCACTAGTATCTATGTTAG+TGG - chr8_3:6488223-6488242 Msa1272770:intron 30.0%
TAATTTATAGAGGCCTTTAG+TGG - chr8_3:6488262-6488281 Msa1272770:intron 30.0%
ACATTTGTCATTGATCTCAA+CGG + chr8_3:6488490-6488509 Msa1272760:intron 30.0%
TCTCATCGTTTACTTTCATA+TGG - chr8_3:6488523-6488542 Msa1272770:intron 30.0%
AATACGACATATTACCAACA+AGG + chr8_3:6488643-6488662 Msa1272760:intron 30.0%
AATATGTCGTATTGTCATTG+TGG - chr8_3:6488650-6488669 Msa1272770:intron 30.0%
CAGAAAACAACTGTAAAATG+TGG - chr8_3:6488709-6488728 Msa1272770:intron 30.0%
!!! CTATGCCAATAGTTTTGATT+CGG - chr8_3:6488747-6488766 Msa1272770:intron 30.0%
!!! TATGCCAATAGTTTTGATTC+GGG - chr8_3:6488748-6488767 Msa1272770:intron 30.0%
!! GTTGACTTGACTTAATATTC+AGG - chr8_3:6488785-6488804 Msa1272770:intron 30.0%
AAAGAGCTCTTGAATATGAT+AGG - chr8_3:6489192-6489211 Msa1272770:three_prime_UTR 30.0%
GTATCAGTTATGTATTTGTC+AGG + chr8_3:6489288-6489307 None:intergenic 30.0%
TTACCATATATTCTCTTGGT+TGG + chr8_3:6489353-6489372 None:intergenic 30.0%
TTCTCTTTGATTATCCTTGT+AGG - chr8_3:6489395-6489414 Msa1272770:three_prime_UTR 30.0%
TCTCTTTGATTATCCTTGTA+GGG - chr8_3:6489396-6489415 Msa1272770:three_prime_UTR 30.0%
GAAATATATAGTTTCGTGTG+TGG - chr8_3:6489555-6489574 Msa1272770:intron 30.0%
! AAGAATAACTCTTTTCACTG+AGG + chr8_3:6489692-6489711 None:intergenic 30.0%
ATCAGCTAATTCTTCCATTA+AGG + chr8_3:6489851-6489870 None:intergenic 30.0%
!!! TAGCTGATACTTGTTTTTGT+TGG - chr8_3:6489863-6489882 Msa1272770:intron 30.0%
! GCCTTTCTTGATTTAAGATT+CGG - chr8_3:6489944-6489963 Msa1272770:CDS 30.0%
ACCGAATCTTAAATCAAGAA+AGG + chr8_3:6489948-6489967 None:intergenic 30.0%
CAGAGTTAACTTCGTATATT+TGG + chr8_3:6490518-6490537 None:intergenic 30.0%
CTTCTTCATTCATTATTGGA+AGG - chr8_3:6490915-6490934 Msa1272770:intron 30.0%
!!! AAGAAATTTTTGGAATTGGG+TGG - chr8_3:6491072-6491091 Msa1272770:intron 30.0%
AGAAGCAGTTAAATATGTTG+AGG + chr8_3:6491193-6491212 None:intergenic 30.0%
TAAATAGTCAAGAAACACGA+TGG - chr8_3:6491389-6491408 Msa1272770:CDS 30.0%
AATGTTACCTCAATTCATGT+TGG + chr8_3:6491549-6491568 None:intergenic 30.0%
! ATTTTTACTTCACACCCAAA+AGG - chr8_3:6491646-6491665 Msa1272770:intron 30.0%
ATATAGTCACAGTAGAAGAA+AGG - chr8_3:6491691-6491710 Msa1272770:intron 30.0%
TCATATTGTGATGTTGGAAA+TGG - chr8_3:6491876-6491895 Msa1272770:intron 30.0%
! ATCTTATTCTTACCTTTTCC+TGG - chr8_3:6491998-6492017 Msa1272770:intron 30.0%
AATCCATGGAGAAATAAAGA+TGG - chr8_3:6492024-6492043 Msa1272770:intron 30.0%
! AAGTTTAAGTTTGATAGGCT+TGG + chr8_3:6492064-6492083 None:intergenic 30.0%
AACAACATTTCATTCCATTG+CGG - chr8_3:6492184-6492203 Msa1272770:intron 30.0%
GAAGTGTATGAAACATTAAG+AGG + chr8_3:6492214-6492233 None:intergenic 30.0%
AATGAACAAACCTGTAGAAA+AGG - chr8_3:6492648-6492667 Msa1272770:intron 30.0%
ATGAACAAACCTGTAGAAAA+GGG - chr8_3:6492649-6492668 Msa1272770:intron 30.0%
! ACGAAAGTGGTTTCAATTTT+GGG + chr8_3:6492700-6492719 None:intergenic 30.0%
TTCGTCCAAAGAATCAAATA+TGG - chr8_3:6492715-6492734 Msa1272770:intron 30.0%
! GAATCAAATATGGTCTTTTG+AGG - chr8_3:6492725-6492744 Msa1272770:intron 30.0%
AATGACACAAATAAGCTCAT+TGG + chr8_3:6492758-6492777 None:intergenic 30.0%
AAGAAAGAGAGTGAAACTGA+AGG + chr8_3:6487129-6487148 Msa1272760:CDS 35.0%
CACGTTTAGAAGTAGAAGAT+TGG + chr8_3:6487204-6487223 Msa1272760:CDS 35.0%
!! TTTTGGTTGTTCTCAATGAG+AGG + chr8_3:6487280-6487299 Msa1272760:CDS 35.0%
!! ATGATGATGAGGGAATGTTT+TGG + chr8_3:6487297-6487316 Msa1272760:CDS 35.0%
! AAACACTTGTGATACTGGTT+TGG + chr8_3:6487697-6487716 Msa1272760:intron 35.0%
ATTTCTCAAAAATCCTGACC+AGG + chr8_3:6487950-6487969 Msa1272760:CDS 35.0%
TTAGTTCCATAAGCTCCTTA+GGG + chr8_3:6488146-6488165 Msa1272760:CDS 35.0%
AAAAAGTCAGCAACCACTAA+AGG + chr8_3:6488278-6488297 Msa1272760:intron 35.0%
ATCAGTTAGTAGTTAGTTGC+TGG - chr8_3:6488363-6488382 Msa1272770:three_prime_UTR 35.0%
CGTATTGTCATTGTGGAATA+AGG - chr8_3:6488657-6488676 Msa1272770:intron 35.0%
!!! ATGCCAATAGTTTTGATTCG+GGG - chr8_3:6488749-6488768 Msa1272770:intron 35.0%
! TTAAGTTGCGCTTGATACTT+AGG - chr8_3:6488843-6488862 Msa1272770:intron 35.0%
TAAGTTGCGCTTGATACTTA+GGG - chr8_3:6488844-6488863 Msa1272770:intron 35.0%
TTAACAGACAGTGTAAGTCT+AGG - chr8_3:6488945-6488964 Msa1272770:three_prime_UTR 35.0%
GGTACCACAAAAGCAATTAA+GGG + chr8_3:6489111-6489130 Msa1272760:CDS 35.0%
TGGTACCACAAAAGCAATTA+AGG + chr8_3:6489112-6489131 Msa1272760:CDS 35.0%
TGAAGAGTTTACCTCAAACA+TGG + chr8_3:6489260-6489279 None:intergenic 35.0%
CATCCAACCAAGAGAATATA+TGG - chr8_3:6489347-6489366 Msa1272770:three_prime_UTR 35.0%
GAAAATACACCAGAAAGAGT+TGG - chr8_3:6489480-6489499 Msa1272770:intron 35.0%
TGATTCTTACCAACTCTTTC+TGG + chr8_3:6489492-6489511 None:intergenic 35.0%
GCTTGAAAAGTTGACGATTA+AGG + chr8_3:6489587-6489606 None:intergenic 35.0%
! ATAACTCTTTTCACTGAGGA+AGG + chr8_3:6489688-6489707 None:intergenic 35.0%
AAAGAGTTTATAGCCGATCA+TGG + chr8_3:6489809-6489828 None:intergenic 35.0%
CGTAGCATTATGAACCTATT+TGG - chr8_3:6490052-6490071 Msa1272770:intron 35.0%
TGTACTTCAAGACACCAAAT+AGG + chr8_3:6490069-6490088 None:intergenic 35.0%
TGTCTTGAAGTACAAGAAGA+TGG - chr8_3:6490075-6490094 Msa1272770:intron 35.0%
GTCTTGAAGTACAAGAAGAT+GGG - chr8_3:6490076-6490095 Msa1272770:intron 35.0%
TCTTGAAGTACAAGAAGATG+GGG - chr8_3:6490077-6490096 Msa1272770:intron 35.0%
GAGGAATTTCTTCAGAATTC+TGG - chr8_3:6490100-6490119 Msa1272770:intron 35.0%
! TTCGGGAACATTCAACATTT+TGG + chr8_3:6490185-6490204 None:intergenic 35.0%
! AAATGCATTTTAGACCTGGA+AGG - chr8_3:6490222-6490241 Msa1272770:intron 35.0%
TTGAGATCATAAGACGTGTA+TGG + chr8_3:6490260-6490279 None:intergenic 35.0%
CTTTCAGGAGATAAACTAGT+GGG - chr8_3:6490426-6490445 Msa1272770:intron 35.0%
ATACGAAGTTAACTCTGTTG+AGG - chr8_3:6490521-6490540 Msa1272770:CDS 35.0%
TGCTGAAATGCATATGTTTC+AGG - chr8_3:6490739-6490758 Msa1272770:intron 35.0%
GCTGAAATGCATATGTTTCA+GGG - chr8_3:6490740-6490759 Msa1272770:intron 35.0%
GAAGTGGCAAGAATTATTTG+TGG - chr8_3:6490787-6490806 Msa1272770:CDS 35.0%
TGTCTTGTATAACCTGTGAT+CGG + chr8_3:6491041-6491060 None:intergenic 35.0%
TGTGAGAAAGCAAAGCAAAA+TGG + chr8_3:6491144-6491163 None:intergenic 35.0%
TAATGGCAGCTACTCTAAAT+GGG + chr8_3:6491269-6491288 None:intergenic 35.0%
TCAGGAAGAATTGGTACTAA+TGG + chr8_3:6491286-6491305 None:intergenic 35.0%
GAGTGAATTTCAGGAAGAAT+TGG + chr8_3:6491295-6491314 None:intergenic 35.0%
TTCCTGAAATTCACTCAACT+TGG - chr8_3:6491299-6491318 Msa1272770:intron 35.0%
TCCCTCTTTGTCAAAAATTC+AGG - chr8_3:6491810-6491829 Msa1272770:intron 35.0%
! CCCTGAATTTTTGACAAAGA+GGG + chr8_3:6491814-6491833 None:intergenic 35.0%
CCCTCTTTGTCAAAAATTCA+GGG - chr8_3:6491811-6491830 Msa1272770:intron 35.0%
! TCCCTGAATTTTTGACAAAG+AGG + chr8_3:6491815-6491834 None:intergenic 35.0%
AATATCTTCTTCACAGTTGC+TGG - chr8_3:6491840-6491859 Msa1272770:intron 35.0%
GAATGCTCATATTGTGATGT+TGG - chr8_3:6491870-6491889 Msa1272770:intron 35.0%
! CAACCATCTTTATTTCTCCA+TGG + chr8_3:6492030-6492049 None:intergenic 35.0%
CATGGAGAAATAAAGATGGT+TGG - chr8_3:6492028-6492047 Msa1272770:intron 35.0%
AACTTAAACTTGAATGGCTC+AGG - chr8_3:6492073-6492092 Msa1272770:intron 35.0%
ATTACTTACGATGAACATGG+AGG + chr8_3:6492160-6492179 None:intergenic 35.0%
GTGATTACTTACGATGAACA+TGG + chr8_3:6492163-6492182 None:intergenic 35.0%
!! TTCGACTTGTTATCAATACC+TGG + chr8_3:6492289-6492308 None:intergenic 35.0%
!! TCAAGAAGCATTGTGAAGAA+GGG + chr8_3:6492348-6492367 None:intergenic 35.0%
!! TTCAAGAAGCATTGTGAAGA+AGG + chr8_3:6492349-6492368 None:intergenic 35.0%
TAATCACTTTCAGGAGTCTT+AGG + chr8_3:6492414-6492433 None:intergenic 35.0%
! GACGAAAGTGGTTTCAATTT+TGG + chr8_3:6492701-6492720 None:intergenic 35.0%
TTTGATTCTTTGGACGAAAG+TGG + chr8_3:6492713-6492732 None:intergenic 35.0%
ACACAAATAAGCTCATTGGA+GGG + chr8_3:6492754-6492773 None:intergenic 35.0%
GGAGTTAGTTAAAGAGTTTG+CGG + chr8_3:6492870-6492889 None:intergenic 35.0%
TTGTAAATGGGTACCAAATC+CGG - chr8_3:6492890-6492909 Msa1272770:intron 35.0%
! GGTTATGAATGGGTTTAAAC+CGG + chr8_3:6492912-6492931 None:intergenic 35.0%
AAAAAAGTTGCCTCCAATGA+TGG + chr8_3:6493002-6493021 None:intergenic 35.0%
!! AGCAAATTTTTGGAGAACCA+TGG + chr8_3:6493042-6493061 None:intergenic 35.0%
TTGCTCGTAAATATCTTGGA+TGG - chr8_3:6493057-6493076 Msa1272770:CDS 35.0%
TTGGAATCAGATGTGAAGAT+TGG - chr8_3:6493139-6493158 Msa1272770:exon 35.0%
TGGAATCAGATGTGAAGATT+GGG - chr8_3:6493140-6493159 Msa1272770:exon 35.0%
! TGTAATTAGGGAGTTTGGTG+AGG + chr8_3:6487168-6487187 Msa1272760:CDS 40.0%
GAAGTAGAAGATTGGGAGAT+TGG + chr8_3:6487196-6487215 Msa1272760:CDS 40.0%
! AGTTTGGAGGATGATGATGA+GGG + chr8_3:6487307-6487326 Msa1272760:CDS 40.0%
! AAGTTTGGAGGATGATGATG+AGG + chr8_3:6487308-6487327 Msa1272760:CDS 40.0%
AAGAACAAGGACAAGTTTGG+AGG + chr8_3:6487320-6487339 Msa1272760:CDS 40.0%
TCCAAACTTGTCCTTGTTCT+TGG - chr8_3:6487319-6487338 Msa1272770:three_prime_UTR 40.0%
ACCAAGAACAAGGACAAGTT+TGG + chr8_3:6487323-6487342 Msa1272760:CDS 40.0%
AAACTTGTCCTTGTTCTTGG+TGG - chr8_3:6487322-6487341 Msa1272770:three_prime_UTR 40.0%
AGCACAAACACTTGTGATAC+TGG + chr8_3:6487702-6487721 Msa1272760:intron 40.0%
TGTTTGTGCTCAATCCAAAC+AGG - chr8_3:6487712-6487731 Msa1272770:intron 40.0%
CTCAAGGACTCAAGGTAAAT+TGG + chr8_3:6487855-6487874 Msa1272760:CDS 40.0%
GATACAAATCAGATGGCTCA+AGG + chr8_3:6487871-6487890 Msa1272760:CDS 40.0%
! GCCATCTGATTTGTATCCAA+TGG - chr8_3:6487874-6487893 Msa1272770:three_prime_UTR 40.0%
GCCATTGGATACAAATCAGA+TGG + chr8_3:6487878-6487897 Msa1272760:CDS 40.0%
AGTATGCTAGTTCAAGCCAT+TGG + chr8_3:6487893-6487912 Msa1272760:CDS 40.0%
CCCAGAGTAAAAAAACCCAA+CGG + chr8_3:6487923-6487942 Msa1272760:CDS 40.0%
!!! CCGTTGGGTTTTTTTACTCT+GGG - chr8_3:6487920-6487939 Msa1272770:three_prime_UTR 40.0%
!!! CGTTGGGTTTTTTTACTCTG+GGG - chr8_3:6487921-6487940 Msa1272770:three_prime_UTR 40.0%
AAGTTACCCTAAGGAGCTTA+TGG - chr8_3:6488137-6488156 Msa1272770:three_prime_UTR 40.0%
CTTAGTTCCATAAGCTCCTT+AGG + chr8_3:6488147-6488166 Msa1272760:CDS 40.0%
TAGTATAGCTCACATGTCCT+TGG + chr8_3:6488569-6488588 Msa1272760:intron 40.0%
ACTCCCCGAATCAAAACTAT+TGG + chr8_3:6488755-6488774 Msa1272760:intron 40.0%
TTGTTCACCAAACAGTGTCT+TGG + chr8_3:6488882-6488901 Msa1272760:CDS 40.0%
ACAAGATGAAGAGAAACTGC+AGG - chr8_3:6488898-6488917 Msa1272770:three_prime_UTR 40.0%
! GTGTAAGTCTAGGACTTGTT+CGG - chr8_3:6488955-6488974 Msa1272770:three_prime_UTR 40.0%
! TCTAGGACTTGTTCGGTTTA+GGG - chr8_3:6488962-6488981 Msa1272770:three_prime_UTR 40.0%
!! AAGGCCCTTAATTGCTTTTG+TGG - chr8_3:6489104-6489123 Msa1272770:three_prime_UTR 40.0%
!! CAAAGCTTTTTCTTCCTTGG+TGG + chr8_3:6489132-6489151 Msa1272760:CDS 40.0%
!! CCACAAAGCTTTTTCTTCCT+TGG + chr8_3:6489135-6489154 Msa1272760:CDS 40.0%
CCAAGGAAGAAAAAGCTTTG+TGG - chr8_3:6489132-6489151 Msa1272770:three_prime_UTR 40.0%
AGGTATTCAAAGGAGACACA+AGG - chr8_3:6489212-6489231 Msa1272770:three_prime_UTR 40.0%
! CACAAGGAAGCATGATGATT+TGG - chr8_3:6489228-6489247 Msa1272770:three_prime_UTR 40.0%
TTTGGATCCATCCATGTTTG+AGG - chr8_3:6489246-6489265 Msa1272770:three_prime_UTR 40.0%
GAGTTTACCTCAAACATGGA+TGG + chr8_3:6489256-6489275 None:intergenic 40.0%
! GAACAACAGCTTTTCCTTCA+AGG - chr8_3:6489445-6489464 Msa1272770:CDS 40.0%
CCATGGCAATTCATTACACT+TGG + chr8_3:6489734-6489753 None:intergenic 40.0%
CCAAGTGTAATGAATTGCCA+TGG - chr8_3:6489731-6489750 Msa1272770:CDS 40.0%
AGTGTAATGAATTGCCATGG+AGG - chr8_3:6489734-6489753 Msa1272770:CDS 40.0%
ATTAGGTATGCTTACCTCCA+TGG + chr8_3:6489751-6489770 None:intergenic 40.0%
TAGTGTAGCCTATCCATGAT+CGG - chr8_3:6489793-6489812 Msa1272770:CDS 40.0%
GTTTATAGCCGATCATGGAT+AGG + chr8_3:6489804-6489823 None:intergenic 40.0%
ATTAAGGTCACACTAGATGC+TGG + chr8_3:6489835-6489854 None:intergenic 40.0%
AGCATCTAGTGTGACCTTAA+TGG - chr8_3:6489834-6489853 Msa1272770:intron 40.0%
! AGATTCGGTTTCACTACGTA+TGG - chr8_3:6489900-6489919 Msa1272770:intron 40.0%
! GTTACTACCATGCTACTTGT+TGG - chr8_3:6489922-6489941 Msa1272770:CDS 40.0%
CTTGAAGTACAAGAAGATGG+GGG - chr8_3:6490078-6490097 Msa1272770:intron 40.0%
ACATTACTCAAAGCAACAGC+TGG - chr8_3:6490281-6490300 Msa1272770:intron 40.0%
CATTACTCAAAGCAACAGCT+GGG - chr8_3:6490282-6490301 Msa1272770:intron 40.0%
! GAAATTTTGTGACGGCTTTC+AGG - chr8_3:6490411-6490430 Msa1272770:intron 40.0%
GCTTTCAGGAGATAAACTAG+TGG - chr8_3:6490425-6490444 Msa1272770:intron 40.0%
TTCAGCAACCACAATTCTAC+TGG + chr8_3:6490457-6490476 None:intergenic 40.0%
CTGTTGAGGTAAACTTTCAG+TGG - chr8_3:6490535-6490554 Msa1272770:CDS 40.0%
ATGCATATGTTTCAGGGTGA+AGG - chr8_3:6490746-6490765 Msa1272770:intron 40.0%
CATGTTCTCGATCAACTTCT+CGG - chr8_3:6491221-6491240 Msa1272770:intron 40.0%
ATGTTCTCGATCAACTTCTC+GGG - chr8_3:6491222-6491241 Msa1272770:intron 40.0%
AATGGCAGCTACTCTAAATG+GGG + chr8_3:6491268-6491287 None:intergenic 40.0%
CTAATGGCAGCTACTCTAAA+TGG + chr8_3:6491270-6491289 None:intergenic 40.0%
! AGCCAAGTTGAGTGAATTTC+AGG + chr8_3:6491304-6491323 None:intergenic 40.0%
TTCACGCAGCTTAATTGGTT+CGG - chr8_3:6491341-6491360 Msa1272770:CDS 40.0%
TAGTCAAGAAACACGATGGA+TGG - chr8_3:6491393-6491412 Msa1272770:CDS 40.0%
GTCTGATCCAACATGAATTG+AGG - chr8_3:6491539-6491558 Msa1272770:intron 40.0%
! GTGGACTGCTTAAAGTTAGA+AGG - chr8_3:6491763-6491782 Msa1272770:intron 40.0%
TTTGACAAAGAGGGATGCAT+GGG + chr8_3:6491805-6491824 None:intergenic 40.0%
! TTTTGACAAAGAGGGATGCA+TGG + chr8_3:6491806-6491825 None:intergenic 40.0%
ACAGTATTGCATGAACCTTC+TGG + chr8_3:6491903-6491922 None:intergenic 40.0%
TGTTCTATCACCACGTAGTT+TGG - chr8_3:6492316-6492335 Msa1272770:intron 40.0%
AGGGAAATTACCAAACTACG+TGG + chr8_3:6492329-6492348 None:intergenic 40.0%
AACAAACCTGTAGAAAAGGG+TGG - chr8_3:6492652-6492671 Msa1272770:intron 40.0%
GACACAAATAAGCTCATTGG+AGG + chr8_3:6492755-6492774 None:intergenic 40.0%
! GGATTTGGTACCCATTTACA+AGG + chr8_3:6492891-6492910 None:intergenic 40.0%
! GAATGGGTTTAAACCGGATT+TGG + chr8_3:6492906-6492925 None:intergenic 40.0%
!!! ATTGTCACTGTCGCGTTTTT+TGG - chr8_3:6492941-6492960 Msa1272770:CDS 40.0%
ATATCTTGGATGGAATGACC+TGG - chr8_3:6493067-6493086 Msa1272770:CDS 40.0%
TATCTTGGATGGAATGACCT+GGG - chr8_3:6493068-6493087 Msa1272770:CDS 40.0%
CTTGAACTAGCATACTGCAG+TGG - chr8_3:6487897-6487916 Msa1272770:three_prime_UTR 45.0%
!!! GCCGTTGGGTTTTTTTACTC+TGG - chr8_3:6487919-6487938 Msa1272770:three_prime_UTR 45.0%
!!! TTTTTTACTCTGGGGAGTCC+TGG - chr8_3:6487929-6487948 Msa1272770:three_prime_UTR 45.0%
TGCTGGCAATCTGTTACAGT+TGG - chr8_3:6488380-6488399 Msa1272770:three_prime_UTR 45.0%
CAGAGTCTAGTTACGATCCA+AGG - chr8_3:6488549-6488568 Msa1272770:intron 45.0%
TTGTAGCATCACTGCTTCAG+CGG - chr8_3:6488816-6488835 Msa1272770:intron 45.0%
GAGAAAGCCAAGACACTGTT+TGG - chr8_3:6488872-6488891 Msa1272770:intron 45.0%
! GTCTAGGACTTGTTCGGTTT+AGG - chr8_3:6488961-6488980 Msa1272770:three_prime_UTR 45.0%
!! TTGCTTTTGTGGTACCACCA+AGG - chr8_3:6489115-6489134 Msa1272770:three_prime_UTR 45.0%
!! ACTCATGTGATTTGCTGCAC+AGG - chr8_3:6489423-6489442 Msa1272770:CDS 45.0%
! CAACAGCTTTTCCTTCAAGG+CGG - chr8_3:6489448-6489467 Msa1272770:CDS 45.0%
AGAAAGGCCAACAAGTAGCA+TGG + chr8_3:6489932-6489951 None:intergenic 45.0%
CACTTCTGAGCATCATTTCC+AGG + chr8_3:6490773-6490792 None:intergenic 45.0%
CTGGAAATGATGCTCAGAAG+TGG - chr8_3:6490771-6490790 Msa1272770:CDS 45.0%
GATTATTCACCACCGATCAC+AGG - chr8_3:6491026-6491045 Msa1272770:intron 45.0%
CTTGTATAACCTGTGATCGG+TGG + chr8_3:6491038-6491057 None:intergenic 45.0%
GCAAAGCAAAATGGAGCTGA+TGG + chr8_3:6491135-6491154 None:intergenic 45.0%
! TCACGCAGCTTAATTGGTTC+GGG - chr8_3:6491342-6491361 Msa1272770:CDS 45.0%
TTACCTGGACAATCAGTTCG+TGG - chr8_3:6491744-6491763 Msa1272770:intron 45.0%
GATGTTGGAAATGGTCCAGA+AGG - chr8_3:6491885-6491904 Msa1272770:intron 45.0%
! ATTTCTCCATGGATTGAGCC+AGG + chr8_3:6492019-6492038 None:intergenic 45.0%
TCAGGACCAACAATGTCATC+TGG - chr8_3:6492091-6492110 Msa1272770:intron 45.0%
CCTAGTCCAGATGACATTGT+TGG + chr8_3:6492100-6492119 None:intergenic 45.0%
CCAACAATGTCATCTGGACT+AGG - chr8_3:6492097-6492116 Msa1272770:intron 45.0%
GATCATCCATCTCACGATGT+AGG + chr8_3:6492259-6492278 None:intergenic 45.0%
GATGGATGATCGTCATTTCC+AGG - chr8_3:6492268-6492287 Msa1272770:intron 45.0%
AACCTGTAGAAAAGGGTGGA+TGG - chr8_3:6492656-6492675 Msa1272770:intron 45.0%
! AAACCGGCTCTATGTGCATT+CGG + chr8_3:6492804-6492823 None:intergenic 45.0%
!! TTGTGATCGTTGGTTCGCTT+CGG + chr8_3:6492846-6492865 None:intergenic 45.0%
AGTTTGCGGTTTGTGATCGT+TGG + chr8_3:6492856-6492875 None:intergenic 45.0%
TGACAGAGGCGGTTATGAAT+GGG + chr8_3:6492922-6492941 None:intergenic 45.0%
ATGACAGAGGCGGTTATGAA+TGG + chr8_3:6492923-6492942 None:intergenic 45.0%
TGAACGAAGCCATCCATCAT+TGG - chr8_3:6492986-6493005 Msa1272770:CDS 45.0%
! AAGTTGCCTCCAATGATGGA+TGG + chr8_3:6492998-6493017 None:intergenic 45.0%
!!! AGGCAACTTTTTTGCTGCTG+AGG - chr8_3:6493009-6493028 Msa1272770:CDS 45.0%
ACTGGTCACTGAATTGAACC+CGG - chr8_3:6493110-6493129 Msa1272770:CDS 45.0%
ATCTGATTCCAACTCCAACC+GGG + chr8_3:6493131-6493150 None:intergenic 45.0%
CATCTGATTCCAACTCCAAC+CGG + chr8_3:6493132-6493151 None:intergenic 45.0%
!! TACTAATTATAAAAATATTT+CGG - chr8_3:6488298-6488317 Msa1272770:intron 5.0%
!!! TTTTTTTTTTTTTAACAAAA+AGG - chr8_3:6489085-6489104 Msa1272770:three_prime_UTR 5.0%
! GTCCTTGTTCTTGGTGGTTC+AGG - chr8_3:6487328-6487347 Msa1272770:three_prime_UTR 50.0%
! CTTGTTCTTGGTGGTTCAGG+CGG - chr8_3:6487331-6487350 Msa1272770:three_prime_UTR 50.0%
! TGCTTTAGGCTCACCGTGTT+TGG - chr8_3:6487482-6487501 Msa1272770:three_prime_UTR 50.0%
TCAGATGGCTCAAGGACTCA+AGG + chr8_3:6487863-6487882 Msa1272760:CDS 50.0%
CACATGAGTGACTCCCTACA+AGG + chr8_3:6489412-6489431 None:intergenic 50.0%
! AGCTTTTCCTTCAAGGCGGT+GGG - chr8_3:6489452-6489471 Msa1272770:CDS 50.0%
GAAGTACAAGAAGATGGGGG+AGG - chr8_3:6490081-6490100 Msa1272770:intron 50.0%
AGACCTGGAAGGTTGACAGA+TGG - chr8_3:6490233-6490252 Msa1272770:intron 50.0%
TCAAAGCAACAGCTGGGCAA+CGG - chr8_3:6490288-6490307 Msa1272770:intron 50.0%
CGAGCAGTGCTTATAGGTCA+AGG - chr8_3:6490311-6490330 Msa1272770:intron 50.0%
GGGTGAAGCCAGTAGAATTG+TGG - chr8_3:6490446-6490465 Msa1272770:intron 50.0%
ATGTTTCAGGGTGAAGGTCC+TGG - chr8_3:6490752-6490771 Msa1272770:CDS 50.0%
GCAGCTTCACGCAGCTTAAT+TGG - chr8_3:6491336-6491355 Msa1272770:CDS 50.0%
AGTCCACGAACTGATTGTCC+AGG + chr8_3:6491750-6491769 None:intergenic 50.0%
!! GCATGGGCTGGAACATTTGA+GGG + chr8_3:6491789-6491808 None:intergenic 50.0%
!! TGCATGGGCTGGAACATTTG+AGG + chr8_3:6491790-6491809 None:intergenic 50.0%
! CCATGGATTGAGCCAGGAAA+AGG + chr8_3:6492013-6492032 None:intergenic 50.0%
! CCTTTTCCTGGCTCAATCCA+TGG - chr8_3:6492010-6492029 Msa1272770:intron 50.0%
TTACGATCACGTGCCAATGC+CGG + chr8_3:6492134-6492153 None:intergenic 50.0%
CATTAAGAGGCAGTCCGCAA+TGG + chr8_3:6492201-6492220 None:intergenic 50.0%
CCATCTCACGATGTAGGAGA+AGG + chr8_3:6492253-6492272 None:intergenic 50.0%
CCTTCTCCTACATCGTGAGA+TGG - chr8_3:6492250-6492269 Msa1272770:intron 50.0%
! CACCATCCACCCTTTTCTAC+AGG + chr8_3:6492661-6492680 None:intergenic 50.0%
CTGTAGAAAAGGGTGGATGG+TGG - chr8_3:6492659-6492678 Msa1272770:intron 50.0%
GCTAGTTAAGCCATGTGACG+TGG - chr8_3:6492778-6492797 Msa1272770:intron 50.0%
GAATGCACATAGAGCCGGTT+TGG - chr8_3:6492803-6492822 Msa1272770:intron 50.0%
!! CACATAGAGCCGGTTTGGTT+GGG - chr8_3:6492808-6492827 Msa1272770:intron 50.0%
GACAGTGACAATGACAGAGG+CGG + chr8_3:6492933-6492952 None:intergenic 50.0%
GCTTCGTTCAAAATGCAGCG+AGG + chr8_3:6492976-6492995 None:intergenic 50.0%
ACGAAGCCATCCATCATTGG+AGG - chr8_3:6492989-6493008 Msa1272770:CDS 50.0%
CTGGGTCAACGTAGATTGAC+TGG - chr8_3:6493092-6493111 Msa1272770:CDS 50.0%
GTCACTGAATTGAACCCGGT+TGG - chr8_3:6493114-6493133 Msa1272770:CDS 50.0%
GAATTGAACCCGGTTGGAGT+TGG - chr8_3:6493120-6493139 Msa1272770:CDS 50.0%
CGCCTGAACCACCAAGAACA+AGG + chr8_3:6487333-6487352 Msa1272760:CDS 55.0%
TAGCATACTGCAGTGGCCGT+TGG - chr8_3:6487904-6487923 Msa1272770:three_prime_UTR 55.0%
AGCATACTGCAGTGGCCGTT+GGG - chr8_3:6487905-6487924 Msa1272770:three_prime_UTR 55.0%
! CAGCTTTTCCTTCAAGGCGG+TGG - chr8_3:6489451-6489470 Msa1272770:CDS 55.0%
TCATCATCCCACCGCCTTGA+AGG + chr8_3:6489462-6489481 None:intergenic 55.0%
GGTCCATCTGTCAACCTTCC+AGG + chr8_3:6490239-6490258 None:intergenic 55.0%
CAACGGCGAGCAGTGCTTAT+AGG - chr8_3:6490305-6490324 Msa1272770:intron 55.0%
GGTTGCTGAAGCTTGCGTAC+AGG - chr8_3:6490467-6490486 Msa1272770:intron 55.0%
ACAAAGAGGGATGCATGGGC+TGG + chr8_3:6491801-6491820 None:intergenic 55.0%
TGGCCGAATGCACATAGAGC+CGG - chr8_3:6492798-6492817 Msa1272770:intron 55.0%
!! GCACATAGAGCCGGTTTGGT+TGG - chr8_3:6492807-6492826 Msa1272770:intron 55.0%
CCGCATCAACCCAACCAAAC+CGG + chr8_3:6492820-6492839 None:intergenic 55.0%
!! CCGGTTTGGTTGGGTTGATG+CGG - chr8_3:6492817-6492836 Msa1272770:intron 55.0%
!! CGGTTTGGTTGGGTTGATGC+GGG - chr8_3:6492818-6492837 Msa1272770:intron 55.0%
CGCGACAGTGACAATGACAG+AGG + chr8_3:6492936-6492955 None:intergenic 55.0%
TGGATGGAATGACCTGGGTC+TGG - chr8_3:6493073-6493092 Msa1272770:CDS 55.0%
GGATGGAATGACCTGGGTCT+GGG - chr8_3:6493074-6493093 Msa1272770:CDS 55.0%
ATCTACGTTGACCCAGACCC+AGG + chr8_3:6493088-6493107 None:intergenic 55.0%
! CTTGGTGGTTCAGGCGGTGT+TGG - chr8_3:6487337-6487356 Msa1272770:three_prime_UTR 60.0%
! TACTCTGGGGAGTCCTGGTC+AGG - chr8_3:6487934-6487953 Msa1272770:three_prime_UTR 60.0%
GTCTAGTCAGCTAGAGCGCG+CGG + chr8_3:6490813-6490832 None:intergenic 60.0%
GGACTAGGAACTCCGTCCAC+CGG - chr8_3:6492112-6492131 Msa1272770:intron 60.0%
GTGCATTCGGCCACGTCACA+TGG + chr8_3:6492791-6492810 None:intergenic 60.0%
GGAACTCCGTCCACCGGCAT+TGG - chr8_3:6492118-6492137 Msa1272770:intron 65.0%
CACGTGCCAATGCCGGTGGA+CGG + chr8_3:6492127-6492146 None:intergenic 65.0%
CGATCACGTGCCAATGCCGG+TGG + chr8_3:6492131-6492150 None:intergenic 65.0%
GCTGCTGAGGCTTCGCTCCA+TGG - chr8_3:6493022-6493041 Msa1272770:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 6487057 6493192 6487057 ID=Msa1272770;Name=Msa1272770
chr8_3 mRNA 6487057 6493192 6487057 ID=Msa1272770-mRNA-1;Parent=Msa1272770;Name=Msa1272770-mRNA-1;_AED=0.01;_eAED=0.01;_QI=52|0.90|0.91|1|0.72|0.66|12|1661|331
chr8_3 exon 6487057 6487584 6487057 ID=Msa1272770-mRNA-1:exon:2483;Parent=Msa1272770-mRNA-1
chr8_3 exon 6487823 6488236 6487823 ID=Msa1272770-mRNA-1:exon:2482;Parent=Msa1272770-mRNA-1
chr8_3 exon 6488329 6488498 6488329 ID=Msa1272770-mRNA-1:exon:2481;Parent=Msa1272770-mRNA-1
chr8_3 exon 6488874 6489488 6488874 ID=Msa1272770-mRNA-1:exon:2480;Parent=Msa1272770-mRNA-1
chr8_3 exon 6489707 6489816 6489707 ID=Msa1272770-mRNA-1:exon:2479;Parent=Msa1272770-mRNA-1
chr8_3 exon 6489917 6490014 6489917 ID=Msa1272770-mRNA-1:exon:2478;Parent=Msa1272770-mRNA-1
chr8_3 exon 6490106 6490219 6490106 ID=Msa1272770-mRNA-1:exon:2477;Parent=Msa1272770-mRNA-1
chr8_3 exon 6490494 6490599 6490494 ID=Msa1272770-mRNA-1:exon:2476;Parent=Msa1272770-mRNA-1
chr8_3 exon 6490748 6490832 6490748 ID=Msa1272770-mRNA-1:exon:2475;Parent=Msa1272770-mRNA-1
chr8_3 exon 6490982 6491035 6490982 ID=Msa1272770-mRNA-1:exon:2474;Parent=Msa1272770-mRNA-1
chr8_3 exon 6491330 6491442 6491330 ID=Msa1272770-mRNA-1:exon:2473;Parent=Msa1272770-mRNA-1
chr8_3 exon 6492891 6493192 6492891 ID=Msa1272770-mRNA-1:exon:2472;Parent=Msa1272770-mRNA-1
chr8_3 five_prime_UTR 6493141 6493192 6493141 ID=Msa1272770-mRNA-1:five_prime_utr;Parent=Msa1272770-mRNA-1
chr8_3 CDS 6492891 6493140 6492891 ID=Msa1272770-mRNA-1:cds;Parent=Msa1272770-mRNA-1
chr8_3 CDS 6491330 6491442 6491330 ID=Msa1272770-mRNA-1:cds;Parent=Msa1272770-mRNA-1
chr8_3 CDS 6490982 6491035 6490982 ID=Msa1272770-mRNA-1:cds;Parent=Msa1272770-mRNA-1
chr8_3 CDS 6490748 6490832 6490748 ID=Msa1272770-mRNA-1:cds;Parent=Msa1272770-mRNA-1
chr8_3 CDS 6490494 6490599 6490494 ID=Msa1272770-mRNA-1:cds;Parent=Msa1272770-mRNA-1
chr8_3 CDS 6490106 6490219 6490106 ID=Msa1272770-mRNA-1:cds;Parent=Msa1272770-mRNA-1
chr8_3 CDS 6489917 6490014 6489917 ID=Msa1272770-mRNA-1:cds;Parent=Msa1272770-mRNA-1
chr8_3 CDS 6489707 6489816 6489707 ID=Msa1272770-mRNA-1:cds;Parent=Msa1272770-mRNA-1
chr8_3 CDS 6489423 6489488 6489423 ID=Msa1272770-mRNA-1:cds;Parent=Msa1272770-mRNA-1
chr8_3 three_prime_UTR 6488874 6489422 6488874 ID=Msa1272770-mRNA-1:three_prime_utr;Parent=Msa1272770-mRNA-1
chr8_3 three_prime_UTR 6488329 6488498 6488329 ID=Msa1272770-mRNA-1:three_prime_utr;Parent=Msa1272770-mRNA-1
chr8_3 three_prime_UTR 6487823 6488236 6487823 ID=Msa1272770-mRNA-1:three_prime_utr;Parent=Msa1272770-mRNA-1
chr8_3 three_prime_UTR 6487057 6487584 6487057 ID=Msa1272770-mRNA-1:three_prime_utr;Parent=Msa1272770-mRNA-1
Gene Sequence

>Msa1272770

ATGGCTTCTACTGTTTTCCTTCAGTTTCACTCTCTTTCTTCTAATCATCAACTCTTCCTCACCAAACTCCCTAATTACAACAATCCAATCTCCCAATCTTCTACTTCTAAACGTGCTTTCAATTATAAGCGCGTTTACTCAAAAGCTGTTTCTACTGACTCACAGAAACCTCTCATTGAGAACAACCAAAACATTCCCTCATCATCATCCTCCAAACTTGTCCTTGTTCTTGGTGGTTCAGGCGGTGTTGGGCAGCTAGTTGTAGCATCACTGCTTCAGCGGAATATTAAGTTGCGCTTGATACTTAGGGATCTTGAGAAAGCCAAGACACTGTTTGGTGAACAAGATGAAGAGAAACTGCAGGTATTCAAAGGAGACACAAGGAAGCATGATGATTTGGATCCATCCATGTTTGAGGGAGTCACTCATGTGATTTGCTGCACAGGAACAACAGCTTTTCCTTCAAGGCGGTGGGATGATGAAAATACACCAGAAAGAGTTGATTGGGTGGGAGTGAAGAATCTAGTATCTGTGTTGCCTTCCTCAGTGAAAAGAGTTATTCTTGTATCATCAATAGGTGTGACCAAGTGTAATGAATTGCCATGGAGACTTGTTAATCTTCATTTTTCACGTAGCATTATGAACCTATTTGGTGTCTTGAAGTACAAGAAGATGGGGGAGGAATTTCTTCAGAATTCTGGCTTTCCATATACTATAATTAGACCTGGAAGGTTGACAGATGGACCATACACGTCTTATGATCTCAATACATTACTCAAAGCAACAGCTGGGCAACGGCGAGCAGTGCTTATAGGTCAAGGAGATAAACTAGTGGGTGAAGCCAGTAGAATTGTGGTTGCTGAAGCTTGCGTACAGGCACTAGATCTAGAAGTCACTGAAAACCAAATATACGAAGTTAACTCTGTTGAGGGTGAAGGTCCTGGAAATGATGCTCAGAAGTGGCAAGAATTATTTGTGGCCGCGCGCTCTAGCTGA

Protein sequence

>Msa1272770

MASTVFLQFHSLSSNHQLFLTKLPNYNNPISQSSTSKRAFNYKRVYSKAVSTDSQKPLIENNQNIPSSSSSKLVLVLGGSGGVGQLVVASLLQRNIKLRLILRDLEKAKTLFGEQDEEKLQVFKGDTRKHDDLDPSMFEGVTHVICCTGTTAFPSRRWDDENTPERVDWVGVKNLVSVLPSSVKRVILVSSIGVTKCNELPWRLVNLHFSRSIMNLFGVLKYKKMGEEFLQNSGFPYTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEASRIVVAEACVQALDLEVTENQIYEVNSVEGEGPGNDAQKWQELFVAARSS*