Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438370 | XP_003603858.2 | 97.569 | 617 | 14 | 1 | 1 | 616 | 1 | 617 | 0.0 | 1238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438370 | sp|Q9SFX3|OST1A_ARATH | 68.412 | 592 | 186 | 1 | 25 | 616 | 24 | 614 | 0.0 | 843 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438370 | G7J5Z1 | 97.569 | 617 | 14 | 1 | 1 | 616 | 1 | 617 | 0.0 | 1238 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044530 | Msa1438370 | -0.806574 | 7.700493e-50 | -8.615850e-47 |
| Msa0044780 | Msa1438370 | -0.800438 | 1.441350e-48 | -8.615850e-47 |
| Msa0045620 | Msa1438370 | 0.806855 | 6.715024e-50 | -8.615850e-47 |
| Msa0091220 | Msa1438370 | -0.804947 | 1.691644e-49 | -8.615850e-47 |
| Msa0091240 | Msa1438370 | -0.804960 | 1.680399e-49 | -8.615850e-47 |
| Msa1362590 | Msa1438370 | 0.810890 | 9.205167e-51 | -8.615850e-47 |
| Msa1371800 | Msa1438370 | 0.804543 | 2.053489e-49 | -8.615850e-47 |
| Msa1387530 | Msa1438370 | 0.811542 | 6.644605e-51 | -8.615850e-47 |
| Msa0610190 | Msa1438370 | 0.807950 | 3.935123e-50 | -8.615850e-47 |
| Msa0619320 | Msa1438370 | -0.801411 | 9.117864e-49 | -8.615850e-47 |
| Msa0623310 | Msa1438370 | 0.804060 | 2.589175e-49 | -8.615850e-47 |
| Msa0661480 | Msa1438370 | 0.928459 | 2.802535e-92 | -8.615850e-47 |
| Msa0663290 | Msa1438370 | 0.807475 | 4.963120e-50 | -8.615850e-47 |
| Msa0664070 | Msa1438370 | 0.801933 | 7.126833e-49 | -8.615850e-47 |
| Msa0685610 | Msa1438370 | 0.806725 | 7.154982e-50 | -8.615850e-47 |
| Msa0704780 | Msa1438370 | -0.841286 | 5.211032e-58 | -8.615850e-47 |
| Msa0732970 | Msa1438370 | 0.841557 | 4.422065e-58 | -8.615850e-47 |
| Msa0773960 | Msa1438370 | 0.835628 | 1.501980e-56 | -8.615850e-47 |
| Msa0137010 | Msa1438370 | -0.820616 | 6.244616e-53 | -8.615850e-47 |
| Msa0140870 | Msa1438370 | -0.801365 | 9.320466e-49 | -8.615850e-47 |
| Msa0211460 | Msa1438370 | 0.815010 | 1.150934e-51 | -8.615850e-47 |
| Msa0221460 | Msa1438370 | -0.830166 | 3.422275e-55 | -8.615850e-47 |
| Msa1255030 | Msa1438370 | -0.802350 | 5.850210e-49 | -8.615850e-47 |
| Msa1255710 | Msa1438370 | 0.802141 | 6.459490e-49 | -8.615850e-47 |
| Msa1286860 | Msa1438370 | -0.815548 | 8.739901e-52 | -8.615850e-47 |
| Msa1295210 | Msa1438370 | -0.808589 | 2.876079e-50 | -8.615850e-47 |
| Msa0403720 | Msa1438370 | -0.825863 | 3.717411e-54 | -8.615850e-47 |
| Msa0428330 | Msa1438370 | -0.806483 | 8.047316e-50 | -8.615850e-47 |
| Msa0436100 | Msa1438370 | 0.919373 | 4.880318e-87 | -8.615850e-47 |
| Msa0463440 | Msa1438370 | 0.803699 | 3.078180e-49 | -8.615850e-47 |
| Msa1008850 | Msa1438370 | 0.801148 | 1.032216e-48 | -8.615850e-47 |
| Msa1026710 | Msa1438370 | 0.814615 | 1.407419e-51 | -8.615850e-47 |
| Msa0238960 | Msa1438370 | -0.832425 | 9.520687e-56 | -8.615850e-47 |
| Msa0244820 | Msa1438370 | -0.827731 | 1.330453e-54 | -8.615850e-47 |
| Msa0267450 | Msa1438370 | -0.803730 | 3.032204e-49 | -8.615850e-47 |
| Msa0276800 | Msa1438370 | -0.816825 | 4.529899e-52 | -8.615850e-47 |
| Msa0300670 | Msa1438370 | -0.839184 | 1.844540e-57 | -8.615850e-47 |
| Msa0303920 | Msa1438370 | 0.807855 | 4.122736e-50 | -8.615850e-47 |
| Msa0316720 | Msa1438370 | -0.823277 | 1.510608e-53 | -8.615850e-47 |
| Msa0336520 | Msa1438370 | 0.802731 | 4.882208e-49 | -8.615850e-47 |
| Msa0337760 | Msa1438370 | -0.827718 | 1.340416e-54 | -8.615850e-47 |
| Msa1133440 | Msa1438370 | -0.818580 | 1.819846e-52 | -8.615850e-47 |
| Msa0506750 | Msa1438370 | 0.891422 | 4.029908e-74 | -8.615850e-47 |
| Msa0511600 | Msa1438370 | -0.801903 | 7.227170e-49 | -8.615850e-47 |
| Msa0521580 | Msa1438370 | 0.810045 | 1.401084e-50 | -8.615850e-47 |
| Msa0567570 | Msa1438370 | 0.810049 | 1.398461e-50 | -8.615850e-47 |
| Msa0568460 | Msa1438370 | -0.808592 | 2.871989e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438370 | MtrunA17_Chr3g0144221 | 97.569 | 617 | 14 | 1 | 1 | 616 | 1 | 617 | 0.0 | 1238 |
| Msa1438370 | MtrunA17_Chr1g0199651 | 54.095 | 464 | 210 | 2 | 4 | 466 | 8 | 469 | 5.14e-172 | 497 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438370 | AT1G76400.1 | 68.412 | 592 | 186 | 1 | 25 | 616 | 24 | 614 | 0.0 | 843 |
| Msa1438370 | AT1G76400.2 | 68.113 | 530 | 168 | 1 | 25 | 554 | 24 | 552 | 0.0 | 752 |
| Msa1438370 | AT2G01720.1 | 53.057 | 458 | 205 | 4 | 14 | 465 | 10 | 463 | 1.16e-165 | 481 |
Find 156 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGACTTCTGCATCTTATT+TGG | 0.144569 | tig0028543:-18925 | Msa1438370:CDS |
| CATCGTTGCGTGATCTTTCT+AGG | 0.176304 | tig0028543:-18729 | Msa1438370:CDS |
| CTGGAAATGGTTGCAATATA+TGG | 0.199405 | tig0028543:+23123 | Msa1438370:intergenic |
| ACTGTCTAGAAGTATGTTTC+TGG | 0.210627 | tig0028543:+17999 | Msa1438370:intergenic |
| CGCTTCCTTAATATCTCTTT+TGG | 0.225268 | tig0028543:-22322 | Msa1438370:CDS |
| GAGCCGTTAATGTTGATTTC+TGG | 0.228415 | tig0028543:-19005 | Msa1438370:CDS |
| CAAGTAAAACAAGGTCAAAA+TGG | 0.248950 | tig0028543:+18240 | Msa1438370:intergenic |
| GTCAATCACCAAATCATTAA+TGG | 0.250801 | tig0028543:+22294 | Msa1438370:intergenic |
| CCACTTCAGGACTTCTTGTT+TGG | 0.252717 | tig0028543:-22358 | Msa1438370:CDS |
| ACAAGAGATTTATGATCTTA+TGG | 0.256694 | tig0028543:-18318 | Msa1438370:CDS |
| TCGCCCTTCCCAAGGCCTTT+AGG | 0.289486 | tig0028543:+23179 | Msa1438370:intergenic |
| AAGGAAGAGGGAATATCTTT+AGG | 0.294373 | tig0028543:+23224 | Msa1438370:intergenic |
| TGTCTTTCTTTCACAGGAAA+TGG | 0.294905 | tig0028543:+21894 | Msa1438370:intergenic |
| CTGCTGCAGACTTGACTATC+AGG | 0.298525 | tig0028543:-22675 | Msa1438370:intron |
| AAGTGCTTTACATGGTTATC+AGG | 0.308889 | tig0028543:+23332 | Msa1438370:intergenic |
| TGGATATGGGTTGCCACTTC+AGG | 0.311465 | tig0028543:-22371 | Msa1438370:CDS |
| GCTGGAAAATACAAAACTTC+AGG | 0.319386 | tig0028543:-22970 | Msa1438370:CDS |
| GGGAACCAAAAGAGATATTA+AGG | 0.322733 | tig0028543:+22317 | Msa1438370:intergenic |
| TGCTAAGGAGAGAGATTTGC+AGG | 0.327633 | tig0028543:-18453 | Msa1438370:CDS |
| TCAATCACCAAATCATTAAT+GGG | 0.328904 | tig0028543:+22295 | Msa1438370:intergenic |
| TTTAGGGCGGACAACTTCAT+AGG | 0.340630 | tig0028543:+23241 | Msa1438370:intergenic |
| TGCAAATCTGCTGCAATTAC+CGG | 0.340964 | tig0028543:-24314 | Msa1438370:five_prime_UTR |
| AGGGCTGATTATTCTCAAAA+TGG | 0.345796 | tig0028543:+22883 | Msa1438370:intergenic |
| CATATATATACACTAGAATA+AGG | 0.350488 | tig0028543:-18102 | Msa1438370:three_prime_UTR |
| TATTTCCACTTCTAGTTTGT+GGG | 0.353054 | tig0028543:-22555 | Msa1438370:CDS |
| GATTGTTATGAGAAGAAGTT+AGG | 0.359037 | tig0028543:-18398 | Msa1438370:CDS |
| ATATTTCCACTTCTAGTTTG+TGG | 0.370550 | tig0028543:-22556 | Msa1438370:CDS |
| GAGCATTATAATCTTGTTCA+TGG | 0.371780 | tig0028543:-22795 | Msa1438370:CDS |
| TTCTCAAAATGGATAACAAT+TGG | 0.382836 | tig0028543:+22894 | Msa1438370:intergenic |
| GTAACTTTACCTAAAGGCCT+TGG | 0.391130 | tig0028543:-23188 | Msa1438370:CDS |
| CAGGGATCTGAATTGAAATA+TGG | 0.392730 | tig0028543:-22951 | Msa1438370:CDS |
| CTGGTTCAGTGAGAGCGTTT+TGG | 0.397574 | tig0028543:-24286 | Msa1438370:five_prime_UTR |
| AGATTTGCAGGAGAAGCTTA+TGG | 0.399523 | tig0028543:-18441 | Msa1438370:CDS |
| TAAGAGGTGCATCTGCCTTT+AGG | 0.408931 | tig0028543:-22640 | Msa1438370:CDS |
| AGGAAGAGGGAATATCTTTA+GGG | 0.416520 | tig0028543:+23225 | Msa1438370:intergenic |
| GGAAAGGCGAAATCATCTTC+TGG | 0.418481 | tig0028543:-23275 | Msa1438370:CDS |
| GAGCTCATTCTGTTTACTAC+AGG | 0.418845 | tig0028543:-22592 | Msa1438370:CDS |
| GATTGGACCTTCACGGGATA+AGG | 0.432111 | tig0028543:+23038 | Msa1438370:intergenic |
| GAGGAAGGGAAATTGAAAAT+CGG | 0.432426 | tig0028543:-18376 | Msa1438370:CDS |
| ATGAGAAGAAGTTAGGAGGA+AGG | 0.433364 | tig0028543:-18391 | Msa1438370:CDS |
| AAGCCAGAAATCAACATTAA+CGG | 0.434432 | tig0028543:+19002 | Msa1438370:intergenic |
| GGATGAGATCGGAGAGGACC+TGG | 0.435073 | tig0028543:+24160 | Msa1438370:intergenic |
| CCGCACCACTACCACTCTTA+AGG | 0.447901 | tig0028543:-23946 | Msa1438370:intron |
| GTAATTTAACATTGAGCGAT+TGG | 0.448219 | tig0028543:+23021 | Msa1438370:intergenic |
| ACCTCATGTCTTTCTTTCAC+AGG | 0.448961 | tig0028543:+21888 | Msa1438370:intergenic |
| GACTTCTTGTTTGGAGTCGA+TGG | 0.451851 | tig0028543:-22349 | Msa1438370:CDS |
| TAACTTTACCTAAAGGCCTT+GGG | 0.455605 | tig0028543:-23187 | Msa1438370:CDS |
| GGTTCAAGCAACTATTCATC+AGG | 0.459505 | tig0028543:-18800 | Msa1438370:CDS |
| GTTTACTACAGGGATGAAAT+CGG | 0.459929 | tig0028543:-22581 | Msa1438370:CDS |
| TATTCTGTAACTTTACCTAA+AGG | 0.460646 | tig0028543:-23194 | Msa1438370:CDS |
| TTCTTCTCTAGCACGACAAC+AGG | 0.460738 | tig0028543:+21737 | Msa1438370:intergenic |
| TCAACCGTCTTTCTATGCTC+AGG | 0.463333 | tig0028543:-19028 | Msa1438370:CDS |
| GGAGATTGAGATATCCCATT+GGG | 0.465275 | tig0028543:-22835 | Msa1438370:CDS |
| AGCAACGACTAATGATACTA+TGG | 0.470319 | tig0028543:+18776 | Msa1438370:intergenic |
| TAAAGATATTCCCTCTTCCT+TGG | 0.470995 | tig0028543:-23222 | Msa1438370:CDS |
| TCTAGGACAGGTGATATTCA+AGG | 0.471596 | tig0028543:-18712 | Msa1438370:CDS |
| TGGAAATGGTTGCAATATAT+GGG | 0.474469 | tig0028543:+23124 | Msa1438370:intergenic |
| TGAGAAGAAGTTAGGAGGAA+GGG | 0.475108 | tig0028543:-18390 | Msa1438370:CDS |
| CTGGAAAATACAAAACTTCA+GGG | 0.476503 | tig0028543:-22969 | Msa1438370:CDS |
| AAGTAAAACAAGGTCAAAAT+GGG | 0.479563 | tig0028543:+18241 | Msa1438370:intergenic |
| AATGGAGGAAGATTCTCATA+TGG | 0.481992 | tig0028543:+22927 | Msa1438370:intergenic |
| GCGAAATCATCTTCTGGTGT+TGG | 0.483362 | tig0028543:-23269 | Msa1438370:CDS |
| GCAGATGCACCTCTTACATA+TGG | 0.485700 | tig0028543:+22647 | Msa1438370:intergenic |
| GCTGCAATTACCGGGATCTC+TGG | 0.488390 | tig0028543:-24305 | Msa1438370:five_prime_UTR |
| GGTAATATTTGAGCGGCTTG+TGG | 0.494892 | tig0028543:+18601 | Msa1438370:intergenic |
| ACTTACACGACGGTCAACTT+TGG | 0.499801 | tig0028543:+24134 | Msa1438370:intergenic |
| CTTATTTGGCAAAGATCCAA+TGG | 0.502030 | tig0028543:-18911 | Msa1438370:CDS |
| CTTGGCAGTAAGACGCCTAA+AGG | 0.502523 | tig0028543:+22625 | Msa1438370:intergenic |
| TTGCGTGATCTTTCTAGGAC+AGG | 0.503122 | tig0028543:-18724 | Msa1438370:CDS |
| CAAATAAGATGCAGAAGTCT+TGG | 0.505500 | tig0028543:+18926 | Msa1438370:intergenic |
| GAGCACCTTAAGAGTGGTAG+TGG | 0.506326 | tig0028543:+23941 | Msa1438370:intergenic |
| ATTGAGCGATTGGACCTTCA+CGG | 0.508824 | tig0028543:+23031 | Msa1438370:intergenic |
| AGTTGATTACCTCTTCCCAT+TGG | 0.512116 | tig0028543:+18895 | Msa1438370:intergenic |
| AATAGAGTCCTACACAAAGC+TGG | 0.512238 | tig0028543:-22988 | Msa1438370:CDS |
| AGAATAAGTTGCCAAGGAAG+AGG | 0.516063 | tig0028543:+23211 | Msa1438370:intergenic |
| TGCACCTCTTACATATGGCC+TGG | 0.517740 | tig0028543:+22652 | Msa1438370:intergenic |
| TTGAGCGATTGGACCTTCAC+GGG | 0.522891 | tig0028543:+23032 | Msa1438370:intergenic |
| TAGGACTCTATTCTTGCCTC+AGG | 0.522970 | tig0028543:+22999 | Msa1438370:intergenic |
| GAGGACCTGGGAGGATAGAA+TGG | 0.523253 | tig0028543:+24173 | Msa1438370:intergenic |
| CAAAATGGATAACAATTGGC+AGG | 0.524969 | tig0028543:+22898 | Msa1438370:intergenic |
| ATGAGCTCTTGGTGGCAGCT+TGG | 0.525565 | tig0028543:+22607 | Msa1438370:intergenic |
| GAATAAGTTGCCAAGGAAGA+GGG | 0.531898 | tig0028543:+23212 | Msa1438370:intergenic |
| TTCACAGGAAATGGAACAGA+TGG | 0.535738 | tig0028543:+21903 | Msa1438370:intergenic |
| TAGTAAACAGAATGAGCTCT+TGG | 0.535990 | tig0028543:+22596 | Msa1438370:intergenic |
| CTTTCAGGTTGTCTTGCCAG+AGG | 0.536714 | tig0028543:-21943 | Msa1438370:intron |
| ACAATTGGCAGGTATGAGAA+TGG | 0.537574 | tig0028543:+22909 | Msa1438370:intergenic |
| TTTCAGGTTGTCTTGCCAGA+GGG | 0.540711 | tig0028543:-21942 | Msa1438370:intron |
| AACTCTTTAGCAACGGCGAA+GGG | 0.542494 | tig0028543:+22864 | Msa1438370:intergenic |
| TGATCTGTACATTGCCCCAA+TGG | 0.542650 | tig0028543:+22820 | Msa1438370:intergenic |
| TGAAAATGCTCATTATGCTC+AGG | 0.547728 | tig0028543:+21704 | Msa1438370:intergenic |
| TGTTATGAGAAGAAGTTAGG+AGG | 0.549117 | tig0028543:-18395 | Msa1438370:CDS |
| CAGGCCAGGCCATATGTAAG+AGG | 0.549205 | tig0028543:-22656 | Msa1438370:CDS |
| CACGACGGTCAACTTTGGTA+AGG | 0.549384 | tig0028543:+24139 | Msa1438370:intergenic |
| CTAGGACAGGTGATATTCAA+GGG | 0.554420 | tig0028543:-18711 | Msa1438370:CDS |
| CTTCGCCGTTGCTAAAGAGT+TGG | 0.554612 | tig0028543:-22862 | Msa1438370:CDS |
| CAACCGTCTTTCTATGCTCA+GGG | 0.556453 | tig0028543:-19027 | Msa1438370:CDS |
| TTACCTAAAGGCCTTGGGAA+GGG | 0.556651 | tig0028543:-23182 | Msa1438370:CDS |
| GCAAATCTGCTGCAATTACC+GGG | 0.557395 | tig0028543:-24313 | Msa1438370:five_prime_UTR |
| TCAAACTTTCGCCCTTCCCA+AGG | 0.557699 | tig0028543:+23171 | Msa1438370:intergenic |
| GTCACCCCACAAACTAGAAG+TGG | 0.557838 | tig0028543:+22550 | Msa1438370:intergenic |
| TTATTTGGCAAAGATCCAAT+GGG | 0.565258 | tig0028543:-18910 | Msa1438370:CDS |
| CTTTACATGGTTATCAGGAA+AGG | 0.566975 | tig0028543:+23337 | Msa1438370:intergenic |
| AGCAACACTTAACGAAGGAA+AGG | 0.568080 | tig0028543:-23297 | Msa1438370:CDS |
| TGTATGCTAAGTGCTTTACA+TGG | 0.568391 | tig0028543:+23324 | Msa1438370:intergenic |
| ATTTCCACTTCTAGTTTGTG+GGG | 0.568670 | tig0028543:-22554 | Msa1438370:CDS |
| GGCAAAGATCCAATGGGAAG+AGG | 0.571287 | tig0028543:-18904 | Msa1438370:intron |
| TGCAAAATGGTAAATGAGCA+TGG | 0.575856 | tig0028543:-24381 | None:intergenic |
| TTAGGGCGGACAACTTCATA+GGG | 0.576553 | tig0028543:+23242 | Msa1438370:intergenic |
| GCAGACTTGACTATCAGGCC+AGG | 0.579305 | tig0028543:-22670 | Msa1438370:intron |
| GCAACACTTAACGAAGGAAA+GGG | 0.580045 | tig0028543:-23296 | Msa1438370:CDS |
| GAAGGGCGAAAGTTTGACGT+TGG | 0.580960 | tig0028543:-23165 | Msa1438370:CDS |
| GTGTCGCAGGTAGAGAATGC+AGG | 0.581081 | tig0028543:-23389 | Msa1438370:intron |
| TCTTTCTCCTTATCCCGTGA+AGG | 0.581200 | tig0028543:-23045 | Msa1438370:CDS |
| TTTACCTAAAGGCCTTGGGA+AGG | 0.581516 | tig0028543:-23183 | Msa1438370:CDS |
| CAATCACCAAATCATTAATG+GGG | 0.584647 | tig0028543:+22296 | Msa1438370:intergenic |
| GACCTTGGGTAATATTTGAG+CGG | 0.585756 | tig0028543:+18594 | Msa1438370:intergenic |
| AGTTACAGAATAAGTTGCCA+AGG | 0.586321 | tig0028543:+23205 | Msa1438370:intergenic |
| TAAACAGAATGAGCTCTTGG+TGG | 0.587661 | tig0028543:+22599 | Msa1438370:intergenic |
| CCAAACAAGAAGTCCTGAAG+TGG | 0.588215 | tig0028543:+22358 | Msa1438370:intergenic |
| ATTTACCATTCTATCCTCCC+AGG | 0.591306 | tig0028543:-24178 | Msa1438370:CDS |
| TCTCACTGAACCAGAGATCC+CGG | 0.591331 | tig0028543:+24295 | Msa1438370:intergenic |
| AACTTTGAGCACCTTAAGAG+TGG | 0.594308 | tig0028543:+23935 | Msa1438370:intergenic |
| CCGTTGCTAAAGAGTTGGTG+AGG | 0.595956 | tig0028543:-22857 | Msa1438370:CDS |
| CAACTCTTTAGCAACGGCGA+AGG | 0.602379 | tig0028543:+22863 | Msa1438370:intergenic |
| AACTTTGGTAAGGATGAGAT+CGG | 0.602673 | tig0028543:+24149 | Msa1438370:intergenic |
| CATGGCGGTGCTCAGAGCAA+AGG | 0.603405 | tig0028543:-22777 | Msa1438370:CDS |
| GATGAGATCGGAGAGGACCT+GGG | 0.604322 | tig0028543:+24161 | Msa1438370:intergenic |
| AGCTCATTCTGTTTACTACA+GGG | 0.610364 | tig0028543:-22591 | Msa1438370:CDS |
| GTCTGCATGCATGTAGACAA+TGG | 0.610818 | tig0028543:+18959 | Msa1438370:intergenic |
| AACATTCGAACAAGAAACAA+AGG | 0.611122 | tig0028543:-24357 | Msa1438370:five_prime_UTR |
| GATTGACACTCTTGTTGTGA+AGG | 0.615337 | tig0028543:-22278 | Msa1438370:intron |
| GGTGGAGGAAGTAATTGCTA+AGG | 0.617368 | tig0028543:-18468 | Msa1438370:CDS |
| GATCTGTACATTGCCCCAAT+GGG | 0.625357 | tig0028543:+22821 | Msa1438370:intergenic |
| ATTTCATGATGACGATGATG+AGG | 0.626481 | tig0028543:-24230 | Msa1438370:exon |
| AAGTGGCAACCCATATCCAA+TGG | 0.630677 | tig0028543:+22375 | Msa1438370:intergenic |
| GGGAGATTGAGATATCCCAT+TGG | 0.633387 | tig0028543:-22836 | Msa1438370:CDS |
| AGCCGCTCAAATATTACCCA+AGG | 0.639940 | tig0028543:-18596 | Msa1438370:intron |
| CGTTGCTAAAGAGTTGGTGA+GGG | 0.643300 | tig0028543:-22856 | Msa1438370:CDS |
| ACTTAACGAAGGAAAGGGAA+AGG | 0.652066 | tig0028543:-23291 | Msa1438370:CDS |
| TCCTGTGAAAGAAAGACATG+AGG | 0.667785 | tig0028543:-21889 | Msa1438370:intron |
| GCTCCCTGAGCATAGAAAGA+CGG | 0.670119 | tig0028543:+19024 | Msa1438370:intergenic |
| GCTCAATGTTAAATTACCTG+AGG | 0.670175 | tig0028543:-23015 | Msa1438370:CDS |
| AATCACCAAATCATTAATGG+GGG | 0.672170 | tig0028543:+22297 | Msa1438370:intergenic |
| CCTCACCAACTCTTTAGCAA+CGG | 0.676013 | tig0028543:+22857 | Msa1438370:intergenic |
| CCTTAAGAGTGGTAGTGGTG+CGG | 0.677361 | tig0028543:+23946 | Msa1438370:intergenic |
| GAACTAAATCAAGTAAAACA+AGG | 0.678884 | tig0028543:+18231 | Msa1438370:intergenic |
| ATTGGCAGGTATGAGAATGG+AGG | 0.680768 | tig0028543:+22912 | Msa1438370:intergenic |
| AAGAGGGAATATCTTTAGGG+CGG | 0.682262 | tig0028543:+23228 | Msa1438370:intergenic |
| ATGTCAGCAACACTTAACGA+AGG | 0.697211 | tig0028543:-23302 | Msa1438370:CDS |
| CTCGTTGAAAGAGCTCACAA+AGG | 0.716021 | tig0028543:-18659 | Msa1438370:CDS |
| CATTATAATCTTGTTCATGG+CGG | 0.724346 | tig0028543:-22792 | Msa1438370:CDS |
| CAGAACTTGAGATCGAACCT+CGG | 0.724721 | tig0028543:-22432 | Msa1438370:CDS |
| GAGATTGAGATATCCCATTG+GGG | 0.726808 | tig0028543:-22834 | Msa1438370:CDS |
| TGGTAAGGATGAGATCGGAG+AGG | 0.732813 | tig0028543:+24154 | Msa1438360:intergenic |
| GAGATCGGAGAGGACCTGGG+AGG | 0.742940 | tig0028543:+24164 | Msa1438360:intergenic |
| TGCATGCATGTAGACAATGG+AGG | 0.747749 | tig0028543:+18962 | Msa1438360:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTATTTTTTTTGTG+TGG | - | tig0028543:18449-18468 | Msa1438370:CDS | 10.0% |
| !!! | TATTTTTATTTTTTTTGTGT+GGG | - | tig0028543:18450-18469 | Msa1438370:CDS | 10.0% |
| !!! | AAAAATTCATTTTATATTGT+TGG | + | tig0028543:20726-20745 | Msa1438370:intergenic | 10.0% |
| !!! | AAATTATTTTCCATTTTTTA+TGG | + | tig0028543:21904-21923 | Msa1438370:intergenic | 10.0% |
| !!! | TTATTTTATTTTTGTTTTTC+AGG | - | tig0028543:23856-23875 | Msa1438370:intron | 10.0% |
| !!! | AAAGTTAAATTACAAAGTTT+TGG | + | tig0028543:18500-18519 | Msa1438370:intergenic | 15.0% |
| !! | AAGAATAATAAATGTTGTAT+TGG | - | tig0028543:20965-20984 | Msa1438370:intron | 15.0% |
| !!! | AAATAATTTGAAATTTTTGC+TGG | - | tig0028543:21915-21934 | Msa1438370:CDS | 15.0% |
| !!! | ATATGATATTTGAAGTATTT+TGG | + | tig0028543:21519-21538 | Msa1438370:intergenic | 15.0% |
| !!! | TCAAGATACTTTTTTTTTTT+TGG | - | tig0028543:22230-22249 | Msa1438370:intron | 15.0% |
| !!! | ACAATTAGGTTATTTTATAT+CGG | + | tig0028543:23057-23076 | Msa1438370:intergenic | 15.0% |
| !!! | TTTTTTTTGTACAAACAATT+AGG | + | tig0028543:23071-23090 | Msa1438370:intergenic | 15.0% |
| !! | AGAATTGAAAAATCTTAGAT+CGG | + | tig0028543:18279-18298 | Msa1438370:intergenic | 20.0% |
| !!! | TGAACTTTAGTTTAAAAACT+TGG | - | tig0028543:18752-18771 | Msa1438370:CDS | 20.0% |
| !! | AAGAAAGTAAAATTATGTGT+TGG | + | tig0028543:20115-20134 | Msa1438370:intergenic | 20.0% |
| !!! | AATTCATTTTATATTGTTGG+TGG | + | tig0028543:20723-20742 | Msa1438370:intergenic | 20.0% |
| !! | TCTTAAAAATAAGATGTTTG+TGG | + | tig0028543:20762-20781 | Msa1438370:intergenic | 20.0% |
| !! | CCACTAACTATAATTAATAA+GGG | + | tig0028543:20898-20917 | Msa1438370:intergenic | 20.0% |
| !! | TCCACTAACTATAATTAATA+AGG | + | tig0028543:20899-20918 | Msa1438370:intergenic | 20.0% |
| !! | TGATTGAAATGCAATAAATA+AGG | - | tig0028543:20928-20947 | Msa1438370:intron | 20.0% |
| !! | GATTGAAATGCAATAAATAA+GGG | - | tig0028543:20929-20948 | Msa1438370:intron | 20.0% |
| !!! | AATAAATAAGGGTATGTTAA+TGG | - | tig0028543:20940-20959 | Msa1438370:intron | 20.0% |
| !!! | TACTGGTTTTATTATTGAAT+TGG | - | tig0028543:21114-21133 | Msa1438370:intron | 20.0% |
| !!! | ACTGGTTTTATTATTGAATT+GGG | - | tig0028543:21115-21134 | Msa1438370:intron | 20.0% |
| !! | AGCTTGAAAATAGTTTATAA+TGG | - | tig0028543:21216-21235 | Msa1438370:intron | 20.0% |
| !!! | GTTTGATTTTGATTGAATTA+AGG | + | tig0028543:21601-21620 | Msa1438370:intergenic | 20.0% |
| !! | CAAAACTATTGAATACAAAA+TGG | - | tig0028543:21771-21790 | Msa1438370:CDS | 20.0% |
| !!! | GTTTGATTTTGATTGAATTA+AGG | + | tig0028543:21601-21620 | Msa1438370:intergenic | 20.0% |
| !! | TTGTAACATTCCAATTAAAT+TGG | + | tig0028543:22623-22642 | Msa1438370:intergenic | 20.0% |
| !!! | AAAAACCCTTTTTTTTACAT+GGG | + | tig0028543:22725-22744 | Msa1438370:intergenic | 20.0% |
| !!! | AAAAAACCCTTTTTTTTACA+TGG | + | tig0028543:22726-22745 | Msa1438370:intergenic | 20.0% |
| !!! | CAATTAGGTTATTTTATATC+GGG | + | tig0028543:23056-23075 | Msa1438370:intergenic | 20.0% |
| !!! | CTTTTAAAATGTGAACAATT+AGG | + | tig0028543:23097-23116 | Msa1438370:intergenic | 20.0% |
| !!! | ATTTGATTACTTTTTGTACA+GGG | - | tig0028543:23207-23226 | Msa1438370:CDS | 20.0% |
| !!! | ATATAGTATTTGACTTTAGT+AGG | - | tig0028543:23250-23269 | Msa1438370:CDS | 20.0% |
| !!! | TTTTATTTTTGTTTTTCAGG+TGG | - | tig0028543:23859-23878 | Msa1438370:intron | 20.0% |
| !!! | TTTAGTTCAGAAATTTTTAG+CGG | - | tig0028543:24129-24148 | Msa1438370:intron | 20.0% |
| !! | CATATATATACACTAGAATA+AGG | - | tig0028543:24243-24262 | Msa1438370:exon | 20.0% |
| !! | AAGTCTTCATTTCATCTTTT+AGG | - | tig0028543:18230-18249 | Msa1438370:three_prime_UTR | 25.0% |
| !! | AGTCTTCATTTCATCTTTTA+GGG | - | tig0028543:18231-18250 | Msa1438370:three_prime_UTR | 25.0% |
| ! | TAATTAGTATTTATCGATGC+TGG | - | tig0028543:18298-18317 | Msa1438370:CDS | 25.0% |
| !!! | TTTTATTTTTTTTGTGTGGG+TGG | - | tig0028543:18453-18472 | Msa1438370:CDS | 25.0% |
| !!! | TTTATTTTTTTTGTGTGGGT+GGG | - | tig0028543:18454-18473 | Msa1438370:CDS | 25.0% |
| !! | TGTCATTGTATTTTATCATG+TGG | + | tig0028543:18688-18707 | Msa1438370:intergenic | 25.0% |
| ! | ACATGATAAAATACAATGAC+AGG | - | tig0028543:18687-18706 | Msa1438370:CDS | 25.0% |
| ! | CATGATAAAATACAATGACA+GGG | - | tig0028543:18688-18707 | Msa1438370:CDS | 25.0% |
| ! | TATTCTGTAACTTTACCTAA+AGG | - | tig0028543:19151-19170 | Msa1438370:intron | 25.0% |
| ! | TTCTCAAAATGGATAACAAT+TGG | + | tig0028543:19454-19473 | Msa1438370:intergenic | 25.0% |
| ! | TCAATCACCAAATCATTAAT+GGG | + | tig0028543:20053-20072 | Msa1438370:intergenic | 25.0% |
| !!! | TCATTATTTTGTTGCAAACT+TGG | - | tig0028543:20143-20162 | Msa1438370:intron | 25.0% |
| !!! | TTTACCTGTATATTTTTCAG+AGG | - | tig0028543:20214-20233 | Msa1438370:intron | 25.0% |
| ! | ACATAGATATCTATCATCTA+TGG | + | tig0028543:20509-20528 | Msa1438370:intergenic | 25.0% |
| !!! | TATTACTGTTGCATCTTTTT+TGG | - | tig0028543:20666-20685 | Msa1438370:intron | 25.0% |
| ! | CCCTTATTAATTATAGTTAG+TGG | - | tig0028543:20895-20914 | Msa1438370:intron | 25.0% |
| !! | TGTTGTATTGGTATTGTAAA+AGG | - | tig0028543:20977-20996 | Msa1438370:intron | 25.0% |
| !! | GTTGTATTGGTATTGTAAAA+GGG | - | tig0028543:20978-20997 | Msa1438370:intron | 25.0% |
| !! | TTTGCAGTTTTCTTTTCTAT+TGG | - | tig0028543:21160-21179 | Msa1438370:intron | 25.0% |
| !! | CTCTTTTCATTATGAAACTT+AGG | + | tig0028543:21192-21211 | Msa1438370:intergenic | 25.0% |
| !!! | CCAGATTAGATTTTTTACAT+TGG | + | tig0028543:21285-21304 | Msa1438370:intergenic | 25.0% |
| ! | CCAATGTAAAAAATCTAATC+TGG | - | tig0028543:21282-21301 | Msa1438370:intron | 25.0% |
| ! | TTGTAACCTACCATTTAATT+TGG | + | tig0028543:21749-21768 | Msa1438370:intergenic | 25.0% |
| ! | TTGTAGGATACTAGATTTAT+TGG | - | tig0028543:21988-22007 | Msa1438370:intron | 25.0% |
| ! | TGTAGGATACTAGATTTATT+GGG | - | tig0028543:21989-22008 | Msa1438370:intron | 25.0% |
| ! | ACATTGCATTATTATATGCA+GGG | + | tig0028543:22327-22346 | Msa1438370:intergenic | 25.0% |
| ! | AAACATAACTCCAAATTCTA+AGG | - | tig0028543:22453-22472 | Msa1438370:intron | 25.0% |
| ! | AACATAACTCCAAATTCTAA+GGG | - | tig0028543:22454-22473 | Msa1438370:intron | 25.0% |
| ! | GTAAGATACTAGATTGAATT+GGG | - | tig0028543:22805-22824 | Msa1438370:CDS | 25.0% |
| !! | GCTCTTTATAAACTATTTTC+AGG | + | tig0028543:22988-23007 | Msa1438370:intergenic | 25.0% |
| !!! | GATTTGATTACTTTTTGTAC+AGG | - | tig0028543:23206-23225 | Msa1438370:CDS | 25.0% |
| ! | TCTTTACTTGCAAATGATTA+TGG | - | tig0028543:23489-23508 | Msa1438370:intron | 25.0% |
| ! | TATGGAACTATAAATCAAGA+GGG | + | tig0028543:23835-23854 | Msa1438370:intergenic | 25.0% |
| ! | TTATGGAACTATAAATCAAG+AGG | + | tig0028543:23836-23855 | Msa1438370:intergenic | 25.0% |
| ! | ACAAGAGATTTATGATCTTA+TGG | - | tig0028543:24027-24046 | Msa1438370:intron | 25.0% |
| ! | AAGTAAAACAAGGTCAAAAT+GGG | + | tig0028543:24107-24126 | Msa1438370:intergenic | 25.0% |
| ! | GAACTAAATCAAGTAAAACA+AGG | + | tig0028543:24117-24136 | Msa1438370:intergenic | 25.0% |
| !!! | CAAAGTTTTTAAGAAATGAG+GGG | + | tig0028543:24319-24338 | Msa1438370:intergenic | 25.0% |
| !!! | GCAAAGTTTTTAAGAAATGA+GGG | + | tig0028543:24320-24339 | Msa1438370:intergenic | 25.0% |
| !!! | AGCAAAGTTTTTAAGAAATG+AGG | + | tig0028543:24321-24340 | Msa1438370:intergenic | 25.0% |
| AACATTCGAACAAGAAACAA+AGG | - | tig0028543:17988-18007 | Msa1438370:three_prime_UTR | 30.0% | |
| AGATCAATCTGCAAACAATA+GGG | + | tig0028543:18364-18383 | Msa1438370:intergenic | 30.0% | |
| GCATCAAAGGAAATAAGATA+AGG | + | tig0028543:18900-18919 | Msa1438370:intergenic | 30.0% | |
| TGGAAATGGTTGCAATATAT+GGG | + | tig0028543:19224-19243 | Msa1438370:intergenic | 30.0% | |
| GTAATTTAACATTGAGCGAT+TGG | + | tig0028543:19327-19346 | Msa1438370:intergenic | 30.0% | |
| CTGGAAAATACAAAACTTCA+GGG | - | tig0028543:19376-19395 | Msa1438370:intron | 30.0% | |
| GAGCATTATAATCTTGTTCA+TGG | - | tig0028543:19550-19569 | Msa1438370:intron | 30.0% | |
| CATTATAATCTTGTTCATGG+CGG | - | tig0028543:19553-19572 | Msa1438370:intron | 30.0% | |
| AATTCAGAATCACAGAAACA+AGG | + | tig0028543:19610-19629 | Msa1438370:intergenic | 30.0% | |
| !! | ATATTTCCACTTCTAGTTTG+TGG | - | tig0028543:19789-19808 | Msa1438370:intron | 30.0% |
| !! | TATTTCCACTTCTAGTTTGT+GGG | - | tig0028543:19790-19809 | Msa1438370:intron | 30.0% |
| AATCACCAAATCATTAATGG+GGG | + | tig0028543:20051-20070 | Msa1438370:intergenic | 30.0% | |
| CAATCACCAAATCATTAATG+GGG | + | tig0028543:20052-20071 | Msa1438370:intergenic | 30.0% | |
| GTCAATCACCAAATCATTAA+TGG | + | tig0028543:20054-20073 | Msa1438370:intergenic | 30.0% | |
| ! | AGTTCCTCTGAAAAATATAC+AGG | + | tig0028543:20221-20240 | Msa1438370:intergenic | 30.0% |
| !!! | TTTTTCCTGCTTTTTGTCAT+TGG | - | tig0028543:20317-20336 | Msa1438370:intron | 30.0% |
| GTCATTGTAGTATATTGTGT+AGG | - | tig0028543:20345-20364 | Msa1438370:intron | 30.0% | |
| AGATATCTATCATCTATGGT+TGG | + | tig0028543:20505-20524 | Msa1438370:intergenic | 30.0% | |
| ATCTATGTCATTCCATTGTT+TGG | - | tig0028543:20521-20540 | Msa1438370:intron | 30.0% | |
| TCTATGTCATTCCATTGTTT+GGG | - | tig0028543:20522-20541 | Msa1438370:intron | 30.0% | |
| CTTTGTCTGCAACAATTATA+TGG | + | tig0028543:20561-20580 | Msa1438370:intergenic | 30.0% | |
| ATATCCTGAATTTCATGTAC+TGG | - | tig0028543:21097-21116 | Msa1438370:intron | 30.0% | |
| AAAACCAGTACATGAAATTC+AGG | + | tig0028543:21104-21123 | Msa1438370:intergenic | 30.0% | |
| TGAAAGTTGAAAATAAGCCT+AGG | + | tig0028543:21379-21398 | Msa1438370:intergenic | 30.0% | |
| TTGTAACCAACCAGTTAATT+TGG | + | tig0028543:21714-21733 | Msa1438370:intergenic | 30.0% | |
| CAAAACAGCTCCAAATTAAA+TGG | - | tig0028543:21736-21755 | Msa1438370:CDS | 30.0% | |
| TGATACACGATTCAAAAAAG+TGG | + | tig0028543:22129-22148 | Msa1438370:intergenic | 30.0% | |
| ACCTTATAAGGTGAATAAGT+GGG | - | tig0028543:22278-22297 | Msa1438370:intron | 30.0% | |
| CATTGCATTATTATATGCAG+GGG | + | tig0028543:22326-22345 | Msa1438370:intergenic | 30.0% | |
| GACATTGCATTATTATATGC+AGG | + | tig0028543:22328-22347 | Msa1438370:intergenic | 30.0% | |
| GGGAATAGTTCCAATTTAAT+TGG | - | tig0028543:22610-22629 | Msa1438370:CDS | 30.0% | |
| GTTGACCCTATAATATTTGA+CGG | - | tig0028543:22667-22686 | Msa1438370:CDS | 30.0% | |
| TTGACCCTATAATATTTGAC+GGG | - | tig0028543:22668-22687 | Msa1438370:CDS | 30.0% | |
| !!! | AAAAAAAGGGTTTTTTCTGC+CGG | - | tig0028543:22730-22749 | Msa1438370:intron | 30.0% |
| CGTAAGATACTAGATTGAAT+TGG | - | tig0028543:22804-22823 | Msa1438370:CDS | 30.0% | |
| TAGATTGAATTGGGATACAT+GGG | - | tig0028543:22814-22833 | Msa1438370:CDS | 30.0% | |
| TCTAACCTTCATACTTAGAT+GGG | + | tig0028543:23148-23167 | Msa1438370:intergenic | 30.0% | |
| ATCTAACCTTCATACTTAGA+TGG | + | tig0028543:23149-23168 | Msa1438370:intergenic | 30.0% | |
| TTATAATAGACCTGCAATAC+AGG | + | tig0028543:23295-23314 | Msa1438370:intergenic | 30.0% | |
| AAGCCAGAAATCAACATTAA+CGG | + | tig0028543:23346-23365 | Msa1438370:intergenic | 30.0% | |
| TTATTTGGCAAAGATCCAAT+GGG | - | tig0028543:23435-23454 | Msa1438370:intron | 30.0% | |
| !! | ACACTTTTGTTTCATCATTC+AGG | - | tig0028543:23524-23543 | Msa1438370:intron | 30.0% |
| ! | AATATTACCCAAGGTCATTT+TGG | - | tig0028543:23758-23777 | Msa1438370:intron | 30.0% |
| ! | ATCAAGAGGGAAATTTTATG+TGG | + | tig0028543:23822-23841 | Msa1438370:intergenic | 30.0% |
| !!! | TATTTTTGTTTTTCAGGTGG+AGG | - | tig0028543:23862-23881 | Msa1438370:intron | 30.0% |
| GATTGTTATGAGAAGAAGTT+AGG | - | tig0028543:23947-23966 | Msa1438370:CDS | 30.0% | |
| CAAGTAAAACAAGGTCAAAA+TGG | + | tig0028543:24108-24127 | Msa1438370:intergenic | 30.0% | |
| ! | ATTTCATGATGACGATGATG+AGG | - | tig0028543:18115-18134 | Msa1438370:three_prime_UTR | 35.0% |
| AACTTTGGTAAGGATGAGAT+CGG | + | tig0028543:18199-18218 | Msa1438370:intergenic | 35.0% | |
| TGAAATGAAGACTTACACGA+CGG | + | tig0028543:18224-18243 | Msa1438370:intergenic | 35.0% | |
| TGCAAACAATAGGGAAACAA+TGG | + | tig0028543:18355-18374 | Msa1438370:intergenic | 35.0% | |
| CAGATCAATCTGCAAACAAT+AGG | + | tig0028543:18365-18384 | Msa1438370:intergenic | 35.0% | |
| AAGTTCTGTAGACAACAACA+TGG | + | tig0028543:18644-18663 | Msa1438370:intergenic | 35.0% | |
| TTCATACTTGTGCAAATGAG+AGG | - | tig0028543:18808-18827 | Msa1438370:intron | 35.0% | |
| GAGCAATTACATTTAGCAAG+TGG | + | tig0028543:18869-18888 | Msa1438370:intergenic | 35.0% | |
| AAAGTAAATCGCAGCATCAA+AGG | + | tig0028543:18913-18932 | Msa1438370:intergenic | 35.0% | |
| CTTTACATGGTTATCAGGAA+AGG | + | tig0028543:19011-19030 | Msa1438370:intergenic | 35.0% | |
| AAGTGCTTTACATGGTTATC+AGG | + | tig0028543:19016-19035 | Msa1438370:intergenic | 35.0% | |
| TGTATGCTAAGTGCTTTACA+TGG | + | tig0028543:19024-19043 | Msa1438370:intergenic | 35.0% | |
| AGGAAGAGGGAATATCTTTA+GGG | + | tig0028543:19123-19142 | Msa1438370:intergenic | 35.0% | |
| AAGGAAGAGGGAATATCTTT+AGG | + | tig0028543:19124-19143 | Msa1438370:intergenic | 35.0% | |
| TAAAGATATTCCCTCTTCCT+TGG | - | tig0028543:19123-19142 | Msa1438370:intron | 35.0% | |
| AGTTACAGAATAAGTTGCCA+AGG | + | tig0028543:19143-19162 | Msa1438370:intergenic | 35.0% | |
| TAACTTTACCTAAAGGCCTT+GGG | - | tig0028543:19158-19177 | Msa1438370:intron | 35.0% | |
| CTGGAAATGGTTGCAATATA+TGG | + | tig0028543:19225-19244 | Msa1438370:intergenic | 35.0% | |
| !! | TGCGTAATTTTCTCTGGAAA+TGG | + | tig0028543:19238-19257 | Msa1438370:intergenic | 35.0% |
| GCTCAATGTTAAATTACCTG+AGG | - | tig0028543:19330-19349 | Msa1438370:intron | 35.0% | |
| !! | TGTATTTTCCAGCTTTGTGT+AGG | + | tig0028543:19368-19387 | Msa1438370:intergenic | 35.0% |
| GCTGGAAAATACAAAACTTC+AGG | - | tig0028543:19375-19394 | Msa1438370:intron | 35.0% | |
| CAGGGATCTGAATTGAAATA+TGG | - | tig0028543:19394-19413 | Msa1438370:intron | 35.0% | |
| AATGGAGGAAGATTCTCATA+TGG | + | tig0028543:19421-19440 | Msa1438370:intergenic | 35.0% | |
| CAAAATGGATAACAATTGGC+AGG | + | tig0028543:19450-19469 | Msa1438370:intergenic | 35.0% | |
| AGGGCTGATTATTCTCAAAA+TGG | + | tig0028543:19465-19484 | Msa1438370:intergenic | 35.0% | |
| TAGTAAACAGAATGAGCTCT+TGG | + | tig0028543:19752-19771 | Msa1438370:intergenic | 35.0% | |
| AGCTCATTCTGTTTACTACA+GGG | - | tig0028543:19754-19773 | Msa1438370:intron | 35.0% | |
| GTTTACTACAGGGATGAAAT+CGG | - | tig0028543:19764-19783 | Msa1438370:intron | 35.0% | |
| !! | ATTTCCACTTCTAGTTTGTG+GGG | - | tig0028543:19791-19810 | Msa1438370:intron | 35.0% |
| !! | TGGAAAACTGCTTTTACCAT+TGG | - | tig0028543:19954-19973 | Msa1438370:intron | 35.0% |
| !! | ACTGCTTTTACCATTGGATA+TGG | - | tig0028543:19960-19979 | Msa1438370:intron | 35.0% |
| !! | CTGCTTTTACCATTGGATAT+GGG | - | tig0028543:19961-19980 | Msa1438370:intron | 35.0% |
| ! | CGCTTCCTTAATATCTCTTT+TGG | - | tig0028543:20023-20042 | Msa1438370:intron | 35.0% |
| GGGAACCAAAAGAGATATTA+AGG | + | tig0028543:20031-20050 | Msa1438370:intergenic | 35.0% | |
| CAAACTTGGAATGCAATCTT+TGG | - | tig0028543:20157-20176 | Msa1438370:intron | 35.0% | |
| ! | AGGAACTAGAAGTATAGTAC+AGG | - | tig0028543:20234-20253 | Msa1438370:intron | 35.0% |
| AACAACCAATGACAAAAAGC+AGG | + | tig0028543:20325-20344 | Msa1438370:intergenic | 35.0% | |
| TGACTTACTAATACATCTGC+CGG | - | tig0028543:20370-20389 | Msa1438370:intron | 35.0% | |
| ! | GAAATATCTTTTGAACCCTC+TGG | + | tig0028543:20421-20440 | Msa1438370:intergenic | 35.0% |
| TGTCTTTCTTTCACAGGAAA+TGG | + | tig0028543:20454-20473 | Msa1438370:intergenic | 35.0% | |
| GGACTATAAAACCCAAACAA+TGG | + | tig0028543:20536-20555 | Msa1438370:intergenic | 35.0% | |
| GTCTGCAACAATTATATGGA+TGG | + | tig0028543:20557-20576 | Msa1438370:intergenic | 35.0% | |
| ! | TTTTCACACTTGGATATTGC+TGG | - | tig0028543:20581-20600 | Msa1438370:intron | 35.0% |
| TGAAAATGCTCATTATGCTC+AGG | + | tig0028543:20644-20663 | Msa1438370:intergenic | 35.0% | |
| ! | TGAGCATAATGAGCATTTTC+AGG | - | tig0028543:20643-20662 | Msa1438370:intron | 35.0% |
| !!! | TACTGTTGCATCTTTTTTGG+AGG | - | tig0028543:20669-20688 | Msa1438370:intron | 35.0% |
| !!! | CATTTTATATTGTTGGTGGC+TGG | + | tig0028543:20719-20738 | Msa1438370:intergenic | 35.0% |
| !!! | TGTCCCTTTTGAGTTTTACA+CGG | - | tig0028543:20809-20828 | Msa1438370:intron | 35.0% |
| TACCCGTGTAAAACTCAAAA+GGG | + | tig0028543:20815-20834 | Msa1438370:intergenic | 35.0% | |
| ATACCCGTGTAAAACTCAAA+AGG | + | tig0028543:20816-20835 | Msa1438370:intergenic | 35.0% | |
| GTTAGTGTCCTGAATTTGTA+AGG | - | tig0028543:21063-21082 | Msa1438370:intron | 35.0% | |
| ATTTCCCTCCTTACAAATTC+AGG | + | tig0028543:21074-21093 | Msa1438370:intergenic | 35.0% | |
| TGTGATCATGGTAGTCAAAT+TGG | - | tig0028543:21427-21446 | Msa1438370:intron | 35.0% | |
| GTGATCATGGTAGTCAAATT+GGG | - | tig0028543:21428-21447 | Msa1438370:intron | 35.0% | |
| ACTCACCTTCTATTCCTTTA+CGG | + | tig0028543:21674-21693 | Msa1438370:intergenic | 35.0% | |
| ATAGCTCCAAATTAACTGGT+TGG | - | tig0028543:21705-21724 | Msa1438370:CDS | 35.0% | |
| ACAGCTCCAAATTAAATGGT+AGG | - | tig0028543:21740-21759 | Msa1438370:CDS | 35.0% | |
| !!! | CATTTTTTATGGAACAGTCC+TGG | + | tig0028543:21893-21912 | Msa1438370:intergenic | 35.0% |
| CAGGACTGTTCCATAAAAAA+TGG | - | tig0028543:21891-21910 | Msa1438370:CDS | 35.0% | |
| ATTTATTGGGATATGCATCG+TGG | - | tig0028543:22002-22021 | Msa1438370:intron | 35.0% | |
| TTTATTGGGATATGCATCGT+GGG | - | tig0028543:22003-22022 | Msa1438370:intron | 35.0% | |
| AAAAAGTGGTTGAACGATAC+AGG | + | tig0028543:22115-22134 | Msa1438370:intergenic | 35.0% | |
| TGGCTAGAATTCACCTTATA+AGG | - | tig0028543:22266-22285 | Msa1438370:intron | 35.0% | |
| CACCTTATAAGGTGAATAAG+TGG | - | tig0028543:22277-22296 | Msa1438370:intron | 35.0% | |
| CCTTATAAGGTGAATAAGTG+GGG | - | tig0028543:22279-22298 | Msa1438370:CDS | 35.0% | |
| ! | ACTTCCTCTTTTTCTCTCTA+CGG | + | tig0028543:22552-22571 | Msa1438370:intergenic | 35.0% |
| GTGACCCGTCAAATATTATA+GGG | + | tig0028543:22675-22694 | Msa1438370:intergenic | 35.0% | |
| TGTGACCCGTCAAATATTAT+AGG | + | tig0028543:22676-22695 | Msa1438370:intergenic | 35.0% | |
| TACCGACCCATGTAAAAAAA+AGG | - | tig0028543:22716-22735 | Msa1438370:intron | 35.0% | |
| ACCGACCCATGTAAAAAAAA+GGG | - | tig0028543:22717-22736 | Msa1438370:intron | 35.0% | |
| !!! | ACCCTTTTTTTTACATGGGT+CGG | + | tig0028543:22721-22740 | Msa1438370:intergenic | 35.0% |
| CTAGATTGAATTGGGATACA+TGG | - | tig0028543:22813-22832 | Msa1438370:CDS | 35.0% | |
| TACGATATGAAAACAGCCAT+GGG | + | tig0028543:22891-22910 | Msa1438370:intergenic | 35.0% | |
| ATACGATATGAAAACAGCCA+TGG | + | tig0028543:22892-22911 | Msa1438370:intergenic | 35.0% | |
| !! | TGGCTGTTTTCATATCGTAT+CGG | - | tig0028543:22892-22911 | Msa1438370:CDS | 35.0% |
| !!! | TGATTACTTTTTGTACAGGG+TGG | - | tig0028543:23210-23229 | Msa1438370:CDS | 35.0% |
| CAAATAAGATGCAGAAGTCT+TGG | + | tig0028543:23422-23441 | Msa1438370:intergenic | 35.0% | |
| CAAGACTTCTGCATCTTATT+TGG | - | tig0028543:23420-23439 | Msa1438370:intron | 35.0% | |
| CTTATTTGGCAAAGATCCAA+TGG | - | tig0028543:23434-23453 | Msa1438370:intron | 35.0% | |
| AGCAACGACTAATGATACTA+TGG | + | tig0028543:23572-23591 | Msa1438370:intergenic | 35.0% | |
| TGTTATGAGAAGAAGTTAGG+AGG | - | tig0028543:23950-23969 | Msa1438370:CDS | 35.0% | |
| GAGGAAGGGAAATTGAAAAT+CGG | - | tig0028543:23969-23988 | Msa1438370:CDS | 35.0% | |
| ! | ACTGTCTAGAAGTATGTTTC+TGG | + | tig0028543:24349-24368 | Msa1438370:intergenic | 35.0% |
| TGCAAATCTGCTGCAATTAC+CGG | - | tig0028543:18031-18050 | Msa1438370:three_prime_UTR | 40.0% | |
| ATTTACCATTCTATCCTCCC+AGG | - | tig0028543:18167-18186 | Msa1438370:three_prime_UTR | 40.0% | |
| GGGAAACAATGGTCAGAAAA+AGG | + | tig0028543:18344-18363 | Msa1438370:intergenic | 40.0% | |
| AACTTTGAGCACCTTAAGAG+TGG | + | tig0028543:18413-18432 | Msa1438370:intergenic | 40.0% | |
| ATTTGAACAAAGGCTTACGG+AGG | + | tig0028543:18533-18552 | Msa1438370:intergenic | 40.0% | |
| TCCGTAAGCCTTTGTTCAAA+TGG | - | tig0028543:18532-18551 | Msa1438370:intron | 40.0% | |
| GCCATTTGAACAAAGGCTTA+CGG | + | tig0028543:18536-18555 | Msa1438370:intergenic | 40.0% | |
| ! | CACAGTTGTCTGTGAGTTTT+AGG | - | tig0028543:18609-18628 | Msa1438370:CDS | 40.0% |
| !!! | AGTTGTCTGTGAGTTTTAGG+TGG | - | tig0028543:18612-18631 | Msa1438370:CDS | 40.0% |
| GGTTAAGTAGTTGCGAACAT+AGG | - | tig0028543:18709-18728 | Msa1438370:CDS | 40.0% | |
| TATTATCTTCCTTGTGTCGC+AGG | - | tig0028543:18943-18962 | Msa1438370:CDS | 40.0% | |
| ATGTCAGCAACACTTAACGA+AGG | - | tig0028543:19043-19062 | Msa1438370:CDS | 40.0% | |
| AGCAACACTTAACGAAGGAA+AGG | - | tig0028543:19048-19067 | Msa1438370:intron | 40.0% | |
| GCAACACTTAACGAAGGAAA+GGG | - | tig0028543:19049-19068 | Msa1438370:intron | 40.0% | |
| ACTTAACGAAGGAAAGGGAA+AGG | - | tig0028543:19054-19073 | Msa1438370:intron | 40.0% | |
| ! | AAGAGGGAATATCTTTAGGG+CGG | + | tig0028543:19120-19139 | Msa1438370:intergenic | 40.0% |
| GAATAAGTTGCCAAGGAAGA+GGG | + | tig0028543:19136-19155 | Msa1438370:intergenic | 40.0% | |
| AGAATAAGTTGCCAAGGAAG+AGG | + | tig0028543:19137-19156 | Msa1438370:intergenic | 40.0% | |
| GTAACTTTACCTAAAGGCCT+TGG | - | tig0028543:19157-19176 | Msa1438370:intron | 40.0% | |
| ! | TCAGCTTGCGTAATTTTCTC+TGG | + | tig0028543:19244-19263 | Msa1438370:intergenic | 40.0% |
| AATAGAGTCCTACACAAAGC+TGG | - | tig0028543:19357-19376 | Msa1438370:intron | 40.0% | |
| ACAATTGGCAGGTATGAGAA+TGG | + | tig0028543:19439-19458 | Msa1438370:intergenic | 40.0% | |
| GGAGATTGAGATATCCCATT+GGG | - | tig0028543:19510-19529 | Msa1438370:intron | 40.0% | |
| GAGATTGAGATATCCCATTG+GGG | - | tig0028543:19511-19530 | Msa1438370:intron | 40.0% | |
| ! | AGAGCAAAGGAGAATTTTCC+AGG | - | tig0028543:19581-19600 | Msa1438370:intron | 40.0% |
| ATCACAGAAACAAGGTAACC+TGG | + | tig0028543:19602-19621 | Msa1438370:intergenic | 40.0% | |
| TAAACAGAATGAGCTCTTGG+TGG | + | tig0028543:19749-19768 | Msa1438370:intergenic | 40.0% | |
| GAGCTCATTCTGTTTACTAC+AGG | - | tig0028543:19753-19772 | Msa1438370:intron | 40.0% | |
| TTTGTGGGGTGACTCAAAAA+AGG | - | tig0028543:19805-19824 | Msa1438370:intron | 40.0% | |
| ! | TTTTCCAGCCACCAAAAAGT+GGG | + | tig0028543:19941-19960 | Msa1438370:intergenic | 40.0% |
| TGGTTCCCCCATTAATGATT+TGG | - | tig0028543:20043-20062 | Msa1438370:intron | 40.0% | |
| ! | GATTGACACTCTTGTTGTGA+AGG | - | tig0028543:20067-20086 | Msa1438370:intron | 40.0% |
| TTCACAGGAAATGGAACAGA+TGG | + | tig0028543:20445-20464 | Msa1438370:intergenic | 40.0% | |
| TCCTGTGAAAGAAAGACATG+AGG | - | tig0028543:20456-20475 | Msa1438370:intron | 40.0% | |
| ACCTCATGTCTTTCTTTCAC+AGG | + | tig0028543:20460-20479 | Msa1438370:intergenic | 40.0% | |
| ! | GCAGACAAAGTTTTCACACT+TGG | - | tig0028543:20571-20590 | Msa1438370:intron | 40.0% |
| TACTCCCTCCATCTCATATT+AGG | - | tig0028543:20786-20805 | Msa1438370:intron | 40.0% | |
| GACACCTAATATGAGATGGA+GGG | + | tig0028543:20793-20812 | Msa1438370:intergenic | 40.0% | |
| AAGGGACACCTAATATGAGA+TGG | + | tig0028543:20797-20816 | Msa1438370:intergenic | 40.0% | |
| !!! | GTCCCTTTTGAGTTTTACAC+GGG | - | tig0028543:20810-20829 | Msa1438370:intron | 40.0% |
| !!! | GACGACACCTATTTTTGAGA+CGG | - | tig0028543:21033-21052 | Msa1438370:intron | 40.0% |
| !!! | ACACCTATTTTTGAGACGGA+GGG | - | tig0028543:21037-21056 | Msa1438370:intron | 40.0% |
| AGTGTCCTGAATTTGTAAGG+AGG | - | tig0028543:21066-21085 | Msa1438370:intron | 40.0% | |
| GTGTCCTGAATTTGTAAGGA+GGG | - | tig0028543:21067-21086 | Msa1438370:intron | 40.0% | |
| ACTAGCTGGATTTGTAAGGA+TGG | - | tig0028543:21252-21271 | Msa1438370:intron | 40.0% | |
| TGGATTTGTAAGGATGGTGT+AGG | - | tig0028543:21258-21277 | Msa1438370:intron | 40.0% | |
| AGACCTACTAGTTGTGATCA+TGG | - | tig0028543:21415-21434 | Msa1438370:intron | 40.0% | |
| CTACCATGATCACAACTAGT+AGG | + | tig0028543:21421-21440 | Msa1438370:intergenic | 40.0% | |
| GAAACAGATCGTGTATGTGT+TGG | - | tig0028543:21645-21664 | Msa1438370:intron | 40.0% | |
| GTAAAGGAATAGAAGGTGAG+TGG | - | tig0028543:21673-21692 | Msa1438370:intron | 40.0% | |
| ! | AATAGAAGGTGAGTGGCTTT+TGG | - | tig0028543:21680-21699 | Msa1438370:intron | 40.0% |
| ! | ATAGAAGGTGAGTGGCTTTT+GGG | - | tig0028543:21681-21700 | Msa1438370:intron | 40.0% |
| GGGAATAGCTCCAAATTAAC+TGG | - | tig0028543:21701-21720 | Msa1438370:intron | 40.0% | |
| TATACTGGGTGTGATACTGA+TGG | - | tig0028543:22043-22062 | Msa1438370:intron | 40.0% | |
| ATACTGGGTGTGATACTGAT+GGG | - | tig0028543:22044-22063 | Msa1438370:intron | 40.0% | |
| GCATTGAGAAAACTCAAGCA+TGG | - | tig0028543:22068-22087 | Msa1438370:intron | 40.0% | |
| CTCAAGCATGGTAGTCAAAT+CGG | - | tig0028543:22080-22099 | Msa1438370:intron | 40.0% | |
| TCAAGCATGGTAGTCAAATC+GGG | - | tig0028543:22081-22100 | Msa1438370:intron | 40.0% | |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | - | tig0028543:22246-22265 | Msa1438370:intron | 40.0% |
| TAAGGTGAATTCTAGCCACT+AGG | + | tig0028543:22264-22283 | Msa1438370:intergenic | 40.0% | |
| CCCCACTTATTCACCTTATA+AGG | + | tig0028543:22282-22301 | Msa1438370:intergenic | 40.0% | |
| TCTCTGCTCATTCACTAATG+GGG | + | tig0028543:22485-22504 | Msa1438370:intergenic | 40.0% | |
| CTCTCTGCTCATTCACTAAT+GGG | + | tig0028543:22486-22505 | Msa1438370:intergenic | 40.0% | |
| TCTCTCTGCTCATTCACTAA+TGG | + | tig0028543:22487-22506 | Msa1438370:intergenic | 40.0% | |
| TAGACCGTAGAGAGAAAAAG+AGG | - | tig0028543:22545-22564 | Msa1438370:CDS | 40.0% | |
| AGAGAGAAAAAGAGGAAGTG+TGG | - | tig0028543:22553-22572 | Msa1438370:CDS | 40.0% | |
| ! | GAGAGAAAAAGAGGAAGTGT+GGG | - | tig0028543:22554-22573 | Msa1438370:CDS | 40.0% |
| CAAAACCCTAGAACAGAAAG+CGG | - | tig0028543:22645-22664 | Msa1438370:CDS | 40.0% | |
| GTGTTTCACTTGCAGAAACT+GGG | + | tig0028543:22770-22789 | Msa1438370:intergenic | 40.0% | |
| CCTGCTATACATGGTCATTT+GGG | - | tig0028543:22842-22861 | Msa1438370:CDS | 40.0% | |
| !! | GGCTGTTTTCATATCGTATC+GGG | - | tig0028543:22893-22912 | Msa1438370:CDS | 40.0% |
| ATACGTATCGTGGGATACAT+GGG | - | tig0028543:22916-22935 | Msa1438370:CDS | 40.0% | |
| AAAATCGACGTGTAAGGTGA+GGG | + | tig0028543:23017-23036 | Msa1438370:intergenic | 40.0% | |
| CCTTACAAAATCGACGTGTA+AGG | + | tig0028543:23023-23042 | Msa1438370:intergenic | 40.0% | |
| !!! | CCTTACACGTCGATTTTGTA+AGG | - | tig0028543:23020-23039 | Msa1438370:CDS | 40.0% |
| !! | TCATACTTAGATGGGCTGAT+GGG | + | tig0028543:23140-23159 | Msa1438370:intergenic | 40.0% |
| !! | TTCATACTTAGATGGGCTGA+TGG | + | tig0028543:23141-23160 | Msa1438370:intergenic | 40.0% |
| ATCAGCCCATCTAAGTATGA+AGG | - | tig0028543:23140-23159 | Msa1438370:CDS | 40.0% | |
| TTGTTAGACACGACAACTAG+AGG | - | tig0028543:23170-23189 | Msa1438370:CDS | 40.0% | |
| !! | GAGCCGTTAATGTTGATTTC+TGG | - | tig0028543:23340-23359 | Msa1438370:CDS | 40.0% |
| AGTTGATTACCTCTTCCCAT+TGG | + | tig0028543:23453-23472 | Msa1438370:intergenic | 40.0% | |
| GGTTCAAGCAACTATTCATC+AGG | - | tig0028543:23545-23564 | Msa1438370:intron | 40.0% | |
| ! | TCTAGGACAGGTGATATTCA+AGG | - | tig0028543:23633-23652 | Msa1438370:intron | 40.0% |
| CTAGGACAGGTGATATTCAA+GGG | - | tig0028543:23634-23653 | Msa1438370:intron | 40.0% | |
| !! | CGAGCTATCAACTGATTTTC+TGG | + | tig0028543:23670-23689 | Msa1438370:intergenic | 40.0% |
| GAAGACTGCAAAAATGTCAC+AGG | + | tig0028543:23723-23742 | Msa1438370:intergenic | 40.0% | |
| GACCTTGGGTAATATTTGAG+CGG | + | tig0028543:23754-23773 | Msa1438370:intergenic | 40.0% | |
| !! | TACCCAAGGTCATTTTGGAA+TGG | - | tig0028543:23763-23782 | Msa1438370:intron | 40.0% |
| AGCCATTCCAAAATGACCTT+GGG | + | tig0028543:23768-23787 | Msa1438370:intergenic | 40.0% | |
| AAGCCATTCCAAAATGACCT+TGG | + | tig0028543:23769-23788 | Msa1438370:intergenic | 40.0% | |
| AGATTTGCAGGAGAAGCTTA+TGG | - | tig0028543:23904-23923 | Msa1438370:intron | 40.0% | |
| ATGAGAAGAAGTTAGGAGGA+AGG | - | tig0028543:23954-23973 | Msa1438370:CDS | 40.0% | |
| TGAGAAGAAGTTAGGAGGAA+GGG | - | tig0028543:23955-23974 | Msa1438370:CDS | 40.0% | |
| !!! | TTAGCGATACTTGTTTTGCG+TGG | - | tig0028543:24171-24190 | Msa1438370:CDS | 40.0% |
| !!! | TAGCGATACTTGTTTTGCGT+GGG | - | tig0028543:24172-24191 | Msa1438370:CDS | 40.0% |
| GCAAATCTGCTGCAATTACC+GGG | - | tig0028543:18032-18051 | Msa1438370:three_prime_UTR | 45.0% | |
| !!! | TCAGTGAGAGCGTTTTGGTT+TGG | - | tig0028543:18064-18083 | Msa1438370:three_prime_UTR | 45.0% |
| ACTTACACGACGGTCAACTT+TGG | + | tig0028543:18214-18233 | Msa1438370:intergenic | 45.0% | |
| ! | GGGCATTGCCATTTGAACAA+AGG | + | tig0028543:18543-18562 | Msa1438370:intergenic | 45.0% |
| ATGGCAATGCCCATATTGCT+AGG | - | tig0028543:18551-18570 | Msa1438370:intron | 45.0% | |
| TGTGTCCAGCCTAGCAATAT+GGG | + | tig0028543:18563-18582 | Msa1438370:intergenic | 45.0% | |
| ATGTGTCCAGCCTAGCAATA+TGG | + | tig0028543:18564-18583 | Msa1438370:intergenic | 45.0% | |
| TGAAGTTCCAGGTTTGAACC+CGG | + | tig0028543:18591-18610 | Msa1438370:intergenic | 45.0% | |
| ACAGACAACTGTGAAGTTCC+AGG | + | tig0028543:18602-18621 | Msa1438370:intergenic | 45.0% | |
| AGTTGCGAACATAGGCTTAG+AGG | - | tig0028543:18717-18736 | Msa1438370:CDS | 45.0% | |
| GGAAAGGCGAAATCATCTTC+TGG | - | tig0028543:19070-19089 | Msa1438370:intron | 45.0% | |
| GCGAAATCATCTTCTGGTGT+TGG | - | tig0028543:19076-19095 | Msa1438370:intron | 45.0% | |
| TTAGGGCGGACAACTTCATA+GGG | + | tig0028543:19106-19125 | Msa1438370:intergenic | 45.0% | |
| ! | TTTAGGGCGGACAACTTCAT+AGG | + | tig0028543:19107-19126 | Msa1438370:intergenic | 45.0% |
| TTTACCTAAAGGCCTTGGGA+AGG | - | tig0028543:19162-19181 | Msa1438370:intron | 45.0% | |
| TTACCTAAAGGCCTTGGGAA+GGG | - | tig0028543:19163-19182 | Msa1438370:intron | 45.0% | |
| TCTTTCTCCTTATCCCGTGA+AGG | - | tig0028543:19300-19319 | Msa1438370:intron | 45.0% | |
| ATTGAGCGATTGGACCTTCA+CGG | + | tig0028543:19317-19336 | Msa1438370:intergenic | 45.0% | |
| TAGGACTCTATTCTTGCCTC+AGG | + | tig0028543:19349-19368 | Msa1438370:intergenic | 45.0% | |
| ATTGGCAGGTATGAGAATGG+AGG | + | tig0028543:19436-19455 | Msa1438370:intergenic | 45.0% | |
| AACTCTTTAGCAACGGCGAA+GGG | + | tig0028543:19484-19503 | Msa1438370:intergenic | 45.0% | |
| CCTCACCAACTCTTTAGCAA+CGG | + | tig0028543:19491-19510 | Msa1438370:intergenic | 45.0% | |
| !! | CGTTGCTAAAGAGTTGGTGA+GGG | - | tig0028543:19489-19508 | Msa1438370:intron | 45.0% |
| GGGAGATTGAGATATCCCAT+TGG | - | tig0028543:19509-19528 | Msa1438370:intron | 45.0% | |
| GATCTGTACATTGCCCCAAT+GGG | + | tig0028543:19527-19546 | Msa1438370:intergenic | 45.0% | |
| TGATCTGTACATTGCCCCAA+TGG | + | tig0028543:19528-19547 | Msa1438370:intergenic | 45.0% | |
| GCAGATGCACCTCTTACATA+TGG | + | tig0028543:19701-19720 | Msa1438370:intergenic | 45.0% | |
| ! | TAAGAGGTGCATCTGCCTTT+AGG | - | tig0028543:19705-19724 | Msa1438370:intron | 45.0% |
| CAGAACTTGAGATCGAACCT+CGG | - | tig0028543:19913-19932 | Msa1438370:intron | 45.0% | |
| ! | GTTTTCCAGCCACCAAAAAG+TGG | + | tig0028543:19942-19961 | Msa1438370:intergenic | 45.0% |
| AAGTGGCAACCCATATCCAA+TGG | + | tig0028543:19973-19992 | Msa1438370:intergenic | 45.0% | |
| CCAAACAAGAAGTCCTGAAG+TGG | + | tig0028543:19990-20009 | Msa1438370:intergenic | 45.0% | |
| CCACTTCAGGACTTCTTGTT+TGG | - | tig0028543:19987-20006 | Msa1438370:intron | 45.0% | |
| ! | GACTTCTTGTTTGGAGTCGA+TGG | - | tig0028543:19996-20015 | Msa1438370:intron | 45.0% |
| AACCTGAAAGTTGCAAGCAC+CGG | + | tig0028543:20392-20411 | Msa1438370:intergenic | 45.0% | |
| !! | TTTCAGGTTGTCTTGCCAGA+GGG | - | tig0028543:20403-20422 | Msa1438370:intron | 45.0% |
| TTCTTCTCTAGCACGACAAC+AGG | + | tig0028543:20611-20630 | Msa1438370:intergenic | 45.0% | |
| GGACACCTAATATGAGATGG+AGG | + | tig0028543:20794-20813 | Msa1438370:intergenic | 45.0% | |
| !!! | GACACCTATTTTTGAGACGG+AGG | - | tig0028543:21036-21055 | Msa1438370:intron | 45.0% |
| ACTCCCTCCGTCTCAAAAAT+AGG | + | tig0028543:21043-21062 | Msa1438370:intergenic | 45.0% | |
| AAATCCAGCTAGTGCGTTGA+GGG | + | tig0028543:21245-21264 | Msa1438370:intergenic | 45.0% | |
| ACGCACTAGCTGGATTTGTA+AGG | - | tig0028543:21248-21267 | Msa1438370:intron | 45.0% | |
| TAGGCTAGTACTACTGGGTT+GGG | + | tig0028543:21360-21379 | Msa1438370:intergenic | 45.0% | |
| AAGCCTAGGCTAGTACTACT+GGG | + | tig0028543:21365-21384 | Msa1438370:intergenic | 45.0% | |
| TAAGCCTAGGCTAGTACTAC+TGG | + | tig0028543:21366-21385 | Msa1438370:intergenic | 45.0% | |
| GTATGTGTTGGAAGCCGTAA+AGG | - | tig0028543:21657-21676 | Msa1438370:intron | 45.0% | |
| GGAAGCCGTAAAGGAATAGA+AGG | - | tig0028543:21666-21685 | Msa1438370:intron | 45.0% | |
| TGTAACCCATCAGCTATTGC+AGG | + | tig0028543:21801-21820 | Msa1438370:intergenic | 45.0% | |
| ! | CAAACACCCACGGTTTTCTT+GGG | + | tig0028543:21833-21852 | Msa1438370:intergenic | 45.0% |
| CAAGAAAACCGTGGGTGTTT+GGG | - | tig0028543:21832-21851 | Msa1438370:intron | 45.0% | |
| AAGAAAACCGTGGGTGTTTG+GGG | - | tig0028543:21833-21852 | Msa1438370:intron | 45.0% | |
| TTATGGAACAGTCCTGGAAC+CGG | + | tig0028543:21887-21906 | Msa1438370:intergenic | 45.0% | |
| TTCAGTTGCAGAAACCAGGT+CGG | + | tig0028543:21951-21970 | Msa1438370:intergenic | 45.0% | |
| AGGGGGGATACTAACTATAC+TGG | - | tig0028543:22028-22047 | Msa1438370:intron | 45.0% | |
| GGGGGGATACTAACTATACT+GGG | - | tig0028543:22029-22048 | Msa1438370:intron | 45.0% | |
| ATTATTATATGCAGGGGCCG+GGG | + | tig0028543:22320-22339 | Msa1438370:intergenic | 45.0% | |
| CATTATTATATGCAGGGGCC+GGG | + | tig0028543:22321-22340 | Msa1438370:intergenic | 45.0% | |
| GCATTATTATATGCAGGGGC+CGG | + | tig0028543:22322-22341 | Msa1438370:intergenic | 45.0% | |
| ! | ACAAGAACGTGTGCAGCTTT+TGG | - | tig0028543:22589-22608 | Msa1438370:CDS | 45.0% |
| ! | CAAGAACGTGTGCAGCTTTT+GGG | - | tig0028543:22590-22609 | Msa1438370:CDS | 45.0% |
| GTCAACCGCTTTCTGTTCTA+GGG | + | tig0028543:22653-22672 | Msa1438370:intergenic | 45.0% | |
| ACATGGGTCGGTACTAGAAA+CGG | + | tig0028543:22709-22728 | Msa1438370:intergenic | 45.0% | |
| CGTGTTTCACTTGCAGAAAC+TGG | + | tig0028543:22771-22790 | Msa1438370:intergenic | 45.0% | |
| GCCTGCTATACATGGTCATT+TGG | - | tig0028543:22841-22860 | Msa1438370:CDS | 45.0% | |
| CCCAAATGACCATGTATAGC+AGG | + | tig0028543:22845-22864 | Msa1438370:intergenic | 45.0% | |
| CCATGGGCAAATACGTATCA+GGG | + | tig0028543:22875-22894 | Msa1438370:intergenic | 45.0% | |
| GATACGTATCGTGGGATACA+TGG | - | tig0028543:22915-22934 | Msa1438370:CDS | 45.0% | |
| TACGTATCGTGGGATACATG+GGG | - | tig0028543:22917-22936 | Msa1438370:CDS | 45.0% | |
| AAATCGACGTGTAAGGTGAG+GGG | + | tig0028543:23016-23035 | Msa1438370:intergenic | 45.0% | |
| CAAAATCGACGTGTAAGGTG+AGG | + | tig0028543:23018-23037 | Msa1438370:intergenic | 45.0% | |
| !! | CATACTTAGATGGGCTGATG+GGG | + | tig0028543:23139-23158 | Msa1438370:intergenic | 45.0% |
| AGACACGACAACTAGAGGAA+AGG | - | tig0028543:23175-23194 | Msa1438370:CDS | 45.0% | |
| GACACGACAACTAGAGGAAA+GGG | - | tig0028543:23176-23195 | Msa1438370:CDS | 45.0% | |
| TCAACCGTCTTTCTATGCTC+AGG | - | tig0028543:23317-23336 | Msa1438370:CDS | 45.0% | |
| CAACCGTCTTTCTATGCTCA+GGG | - | tig0028543:23318-23337 | Msa1438370:CDS | 45.0% | |
| TGCATGCATGTAGACAATGG+AGG | + | tig0028543:23386-23405 | Msa1438370:intergenic | 45.0% | |
| GTCTGCATGCATGTAGACAA+TGG | + | tig0028543:23389-23408 | Msa1438370:intergenic | 45.0% | |
| CATCGTTGCGTGATCTTTCT+AGG | - | tig0028543:23616-23635 | Msa1438370:intron | 45.0% | |
| !! | TTGCGTGATCTTTCTAGGAC+AGG | - | tig0028543:23621-23640 | Msa1438370:intron | 45.0% |
| CTCGTTGAAAGAGCTCACAA+AGG | - | tig0028543:23686-23705 | Msa1438370:intron | 45.0% | |
| GGTAATATTTGAGCGGCTTG+TGG | + | tig0028543:23747-23766 | Msa1438370:intergenic | 45.0% | |
| AGCCGCTCAAATATTACCCA+AGG | - | tig0028543:23749-23768 | Msa1438370:intron | 45.0% | |
| GGTGGAGGAAGTAATTGCTA+AGG | - | tig0028543:23877-23896 | Msa1438370:intron | 45.0% | |
| TGCTAAGGAGAGAGATTTGC+AGG | - | tig0028543:23892-23911 | Msa1438370:intron | 45.0% | |
| !! | AAACAAAAATAAAATAATTA+TGG | + | tig0028543:23853-23872 | Msa1438370:intergenic | 5.0% |
| TCTCACTGAACCAGAGATCC+CGG | + | tig0028543:18053-18072 | Msa1438370:intergenic | 50.0% | |
| !!! | CTGGTTCAGTGAGAGCGTTT+TGG | - | tig0028543:18059-18078 | Msa1438370:three_prime_UTR | 50.0% |
| TGGTAAGGATGAGATCGGAG+AGG | + | tig0028543:18194-18213 | Msa1438370:intergenic | 50.0% | |
| CACGACGGTCAACTTTGGTA+AGG | + | tig0028543:18209-18228 | Msa1438370:intergenic | 50.0% | |
| !! | CCTTAAGAGTGGTAGTGGTG+CGG | + | tig0028543:18402-18421 | Msa1438370:intergenic | 50.0% |
| GAGCACCTTAAGAGTGGTAG+TGG | + | tig0028543:18407-18426 | Msa1438370:intergenic | 50.0% | |
| CAATGCCCATATTGCTAGGC+TGG | - | tig0028543:18555-18574 | Msa1438370:intron | 50.0% | |
| CTAGGCTGGACACATTCATC+CGG | - | tig0028543:18569-18588 | Msa1438370:intron | 50.0% | |
| TAGGCTGGACACATTCATCC+GGG | - | tig0028543:18570-18589 | Msa1438370:intron | 50.0% | |
| CATTCATCCGGGTTCAAACC+TGG | - | tig0028543:18581-18600 | Msa1438370:intron | 50.0% | |
| CATTCTCTACCTGCGACACA+AGG | + | tig0028543:18955-18974 | Msa1438370:intergenic | 50.0% | |
| TCAAACTTTCGCCCTTCCCA+AGG | + | tig0028543:19177-19196 | Msa1438370:intergenic | 50.0% | |
| GAAGGGCGAAAGTTTGACGT+TGG | - | tig0028543:19180-19199 | Msa1438370:intron | 50.0% | |
| GATTGGACCTTCACGGGATA+AGG | + | tig0028543:19310-19329 | Msa1438370:intergenic | 50.0% | |
| TTGAGCGATTGGACCTTCAC+GGG | + | tig0028543:19316-19335 | Msa1438370:intergenic | 50.0% | |
| CAACTCTTTAGCAACGGCGA+AGG | + | tig0028543:19485-19504 | Msa1438370:intergenic | 50.0% | |
| CTTCGCCGTTGCTAAAGAGT+TGG | - | tig0028543:19483-19502 | Msa1438370:intron | 50.0% | |
| !! | CCGTTGCTAAAGAGTTGGTG+AGG | - | tig0028543:19488-19507 | Msa1438370:intron | 50.0% |
| CTGCTGCAGACTTGACTATC+AGG | - | tig0028543:19670-19689 | Msa1438370:intron | 50.0% | |
| TGCACCTCTTACATATGGCC+TGG | + | tig0028543:19696-19715 | Msa1438370:intergenic | 50.0% | |
| CTTGGCAGTAAGACGCCTAA+AGG | + | tig0028543:19723-19742 | Msa1438370:intergenic | 50.0% | |
| GTCACCCCACAAACTAGAAG+TGG | + | tig0028543:19798-19817 | Msa1438370:intergenic | 50.0% | |
| GTGGGGTGACTCAAAAAAGG+TGG | - | tig0028543:19808-19827 | Msa1438370:intron | 50.0% | |
| !! | GAACCTCGGTACCCACTTTT+TGG | - | tig0028543:19927-19946 | Msa1438370:intron | 50.0% |
| ! | TGGATATGGGTTGCCACTTC+AGG | - | tig0028543:19974-19993 | Msa1438370:intron | 50.0% |
| !! | CTTTCAGGTTGTCTTGCCAG+AGG | - | tig0028543:20402-20421 | Msa1438370:intron | 50.0% |
| CAAATCCAGCTAGTGCGTTG+AGG | + | tig0028543:21246-21265 | Msa1438370:intergenic | 50.0% | |
| !! | CTTTTGGTGGGTGACTCGAA+TGG | + | tig0028543:21328-21347 | Msa1438370:intergenic | 50.0% |
| CATTCGAGTCACCCACCAAA+AGG | - | tig0028543:21326-21345 | Msa1438370:intron | 50.0% | |
| CTAGGCTAGTACTACTGGGT+TGG | + | tig0028543:21361-21380 | Msa1438370:intergenic | 50.0% | |
| ! | CAACCCAGTAGTACTAGCCT+AGG | - | tig0028543:21359-21378 | Msa1438370:intron | 50.0% |
| GTTCGCCTGCAATAGCTGAT+GGG | - | tig0028543:21793-21812 | Msa1438370:intron | 50.0% | |
| AACCTGACCCAAGAAAACCG+TGG | - | tig0028543:21823-21842 | Msa1438370:intron | 50.0% | |
| ACCTGACCCAAGAAAACCGT+GGG | - | tig0028543:21824-21843 | Msa1438370:intron | 50.0% | |
| ! | CCAAACACCCACGGTTTTCT+TGG | + | tig0028543:21834-21853 | Msa1438370:intergenic | 50.0% |
| CCAAGAAAACCGTGGGTGTT+TGG | - | tig0028543:21831-21850 | Msa1438370:intron | 50.0% | |
| CAGAAAACCCCAAACACCCA+CGG | + | tig0028543:21843-21862 | Msa1438370:intergenic | 50.0% | |
| !! | GGTGTTTGGGGTTTTCTGGA+GGG | - | tig0028543:21845-21864 | Msa1438370:intron | 50.0% |
| TATGGAACAGTCCTGGAACC+GGG | + | tig0028543:21886-21905 | Msa1438370:intergenic | 50.0% | |
| TCAGTTGCAGAAACCAGGTC+GGG | + | tig0028543:21950-21969 | Msa1438370:intergenic | 50.0% | |
| TGGGATATGCATCGTGGGAT+AGG | - | tig0028543:22008-22027 | Msa1438370:intron | 50.0% | |
| GGGATATGCATCGTGGGATA+GGG | - | tig0028543:22009-22028 | Msa1438370:intron | 50.0% | |
| GGATATGCATCGTGGGATAG+GGG | - | tig0028543:22010-22029 | Msa1438370:intron | 50.0% | |
| GATATGCATCGTGGGATAGG+GGG | - | tig0028543:22011-22030 | Msa1438370:intron | 50.0% | |
| ATATGCATCGTGGGATAGGG+GGG | - | tig0028543:22012-22031 | Msa1438370:intron | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | - | tig0028543:22286-22305 | Msa1438370:CDS | 50.0% |
| TGAGCATAGCTCAGTTGGCA+GGG | + | tig0028543:22350-22369 | Msa1438370:intergenic | 50.0% | |
| GGGGCAGAACCCTTAGAATT+TGG | + | tig0028543:22466-22485 | Msa1438370:intergenic | 50.0% | |
| GAGCAGAGAGAAACAGAGCA+TGG | - | tig0028543:22496-22515 | Msa1438370:intron | 50.0% | |
| GGTCAACCGCTTTCTGTTCT+AGG | + | tig0028543:22654-22673 | Msa1438370:intergenic | 50.0% | |
| ! | TTTGACGGGTCACACAATCC+CGG | - | tig0028543:22682-22701 | Msa1438370:intron | 50.0% |
| CATGGGTCGGTACTAGAAAC+GGG | + | tig0028543:22708-22727 | Msa1438370:intergenic | 50.0% | |
| TCACTTGCAGAAACTGGGTC+AGG | + | tig0028543:22765-22784 | Msa1438370:intergenic | 50.0% | |
| TGGGATACGCCTGCTATACA+TGG | - | tig0028543:22833-22852 | Msa1438370:CDS | 50.0% | |
| CCCTGATACGTATTTGCCCA+TGG | - | tig0028543:22872-22891 | Msa1438370:CDS | 50.0% | |
| GCCATGGGCAAATACGTATC+AGG | + | tig0028543:22876-22895 | Msa1438370:intergenic | 50.0% | |
| TCGTATCGGGATACGTATCG+TGG | - | tig0028543:22906-22925 | Msa1438370:CDS | 50.0% | |
| CGTATCGGGATACGTATCGT+GGG | - | tig0028543:22907-22926 | Msa1438370:CDS | 50.0% | |
| TACTCTTGCGCCTGTATTGC+AGG | - | tig0028543:23282-23301 | Msa1438370:CDS | 50.0% | |
| GCTCCCTGAGCATAGAAAGA+CGG | + | tig0028543:23324-23343 | Msa1438370:intergenic | 50.0% | |
| GGCAAAGATCCAATGGGAAG+AGG | - | tig0028543:23441-23460 | Msa1438370:intron | 50.0% | |
| GCTGCAATTACCGGGATCTC+TGG | - | tig0028543:18040-18059 | Msa1438370:three_prime_UTR | 55.0% | |
| GAGGACCTGGGAGGATAGAA+TGG | + | tig0028543:18175-18194 | Msa1438370:intergenic | 55.0% | |
| GATGAGATCGGAGAGGACCT+GGG | + | tig0028543:18187-18206 | Msa1438370:intergenic | 55.0% | |
| CCGCACCACTACCACTCTTA+AGG | - | tig0028543:18399-18418 | Msa1438370:CDS | 55.0% | |
| GTGTCGCAGGTAGAGAATGC+AGG | - | tig0028543:18956-18975 | Msa1438370:CDS | 55.0% | |
| GCAGACTTGACTATCAGGCC+AGG | - | tig0028543:19675-19694 | Msa1438370:intron | 55.0% | |
| CAGGCCAGGCCATATGTAAG+AGG | - | tig0028543:19689-19708 | Msa1438370:intron | 55.0% | |
| ! | ATGAGCTCTTGGTGGCAGCT+TGG | + | tig0028543:19741-19760 | Msa1438370:intergenic | 55.0% |
| ! | CCACCAAAAAGTGGGTACCG+AGG | + | tig0028543:19933-19952 | Msa1438370:intergenic | 55.0% |
| !!! | CCTCGGTACCCACTTTTTGG+TGG | - | tig0028543:19930-19949 | Msa1438370:intron | 55.0% |
| !!! | GGTACCCACTTTTTGGTGGC+TGG | - | tig0028543:19934-19953 | Msa1438370:intron | 55.0% |
| TGCCGGTGCTTGCAACTTTC+AGG | - | tig0028543:20387-20406 | Msa1438370:intron | 55.0% | |
| ! | GGGTGCATGGACCTTTTGGT+GGG | + | tig0028543:21340-21359 | Msa1438370:intergenic | 55.0% |
| ! | TGGGTGCATGGACCTTTTGG+TGG | + | tig0028543:21341-21360 | Msa1438370:intergenic | 55.0% |
| ! | GGTTGGGTGCATGGACCTTT+TGG | + | tig0028543:21344-21363 | Msa1438370:intergenic | 55.0% |
| ! | GTACTACTGGGTTGGGTGCA+TGG | + | tig0028543:21353-21372 | Msa1438370:intergenic | 55.0% |
| GGTTCGCCTGCAATAGCTGA+TGG | - | tig0028543:21792-21811 | Msa1438370:intron | 55.0% | |
| ! | ACCCACGGTTTTCTTGGGTC+AGG | + | tig0028543:21828-21847 | Msa1438370:intergenic | 55.0% |
| !! | CGTGGGTGTTTGGGGTTTTC+TGG | - | tig0028543:21841-21860 | Msa1438370:intron | 55.0% |
| !! | GGGTGTTTGGGGTTTTCTGG+AGG | - | tig0028543:21844-21863 | Msa1438370:intron | 55.0% |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | - | tig0028543:22287-22306 | Msa1438370:CDS | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | - | tig0028543:22288-22307 | Msa1438370:CDS | 55.0% |
| GTGAGCATAGCTCAGTTGGC+AGG | + | tig0028543:22351-22370 | Msa1438370:intergenic | 55.0% | |
| CCTCGTGAGCATAGCTCAGT+TGG | + | tig0028543:22355-22374 | Msa1438370:intergenic | 55.0% | |
| CCAACTGAGCTATGCTCACG+AGG | - | tig0028543:22352-22371 | Msa1438370:CDS | 55.0% | |
| ! | AGAAACTGGGTCAGGTTGCG+CGG | + | tig0028543:22757-22776 | Msa1438370:intergenic | 55.0% |
| !! | CTTAGATGGGCTGATGGGGT+TGG | + | tig0028543:23135-23154 | Msa1438370:intergenic | 55.0% |
| GGATGAGATCGGAGAGGACC+TGG | + | tig0028543:18188-18207 | Msa1438370:intergenic | 60.0% | |
| TCGCCCTTCCCAAGGCCTTT+AGG | + | tig0028543:19169-19188 | Msa1438370:intergenic | 60.0% | |
| CATGGCGGTGCTCAGAGCAA+AGG | - | tig0028543:19568-19587 | Msa1438370:intron | 60.0% | |
| GCATCCCTCAACGCACTAGC+TGG | - | tig0028543:21238-21257 | Msa1438370:intron | 60.0% | |
| GGTGGGTGACTCGAATGGAC+AGG | + | tig0028543:21323-21342 | Msa1438370:intergenic | 60.0% | |
| GGGTCATGCAAAACCCGACC+CGG | - | tig0028543:21865-21884 | Msa1438370:intron | 60.0% | |
| AACAGTCCTGGAACCGGGTC+GGG | + | tig0028543:21881-21900 | Msa1438370:intergenic | 60.0% | |
| GAACAGTCCTGGAACCGGGT+CGG | + | tig0028543:21882-21901 | Msa1438370:intergenic | 60.0% | |
| GTCGGTACTAGAAACGGGCC+GGG | + | tig0028543:22703-22722 | Msa1438370:intergenic | 60.0% | |
| GGTCGGTACTAGAAACGGGC+CGG | + | tig0028543:22704-22723 | Msa1438370:intergenic | 60.0% | |
| GAGATCGGAGAGGACCTGGG+AGG | + | tig0028543:18184-18203 | Msa1438370:intergenic | 65.0% | |
| GCAAAACCCGACCCGGTTCC+AGG | - | tig0028543:21872-21891 | Msa1438370:intron | 65.0% | |
| ! | CTGGTTCGCACATCCCGACC+TGG | - | tig0028543:21934-21953 | Msa1438370:CDS | 65.0% |
| GGTGTCCGGGGTTCGAACCC+CGG | - | tig0028543:22300-22319 | Msa1438370:CDS | 70.0% | |
| ! | CTGGGTCAGGTTGCGCGGTC+CGG | + | tig0028543:22752-22771 | Msa1438370:intergenic | 70.0% |
| AGGGGCCGGGGTTCGAACCC+CGG | + | tig0028543:22308-22327 | Msa1438370:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028543 | gene | 17973 | 24394 | 17973 | ID=Msa1438370;Name=Msa1438370 |
| tig0028543 | mRNA | 17973 | 24394 | 17973 | ID=Msa1438370-mRNA-1;Parent=Msa1438370;Name=Msa1438370-mRNA-1;_AED=0.15;_eAED=0.15;_QI=147|1|1|1|1|1|10|325|616 |
| tig0028543 | exon | 17973 | 18489 | 17973 | ID=Msa1438370-mRNA-1:exon:11224;Parent=Msa1438370-mRNA-1 |
| tig0028543 | exon | 18597 | 18821 | 18597 | ID=Msa1438370-mRNA-1:exon:11223;Parent=Msa1438370-mRNA-1 |
| tig0028543 | exon | 18905 | 19063 | 18905 | ID=Msa1438370-mRNA-1:exon:11222;Parent=Msa1438370-mRNA-1 |
| tig0028543 | exon | 21703 | 21792 | 21703 | ID=Msa1438370-mRNA-1:exon:11221;Parent=Msa1438370-mRNA-1 |
| tig0028543 | exon | 21890 | 21958 | 21890 | ID=Msa1438370-mRNA-1:exon:11220;Parent=Msa1438370-mRNA-1 |
| tig0028543 | exon | 22279 | 22455 | 22279 | ID=Msa1438370-mRNA-1:exon:11219;Parent=Msa1438370-mRNA-1 |
| tig0028543 | exon | 22541 | 22688 | 22541 | ID=Msa1438370-mRNA-1:exon:11218;Parent=Msa1438370-mRNA-1 |
| tig0028543 | exon | 22765 | 23402 | 22765 | ID=Msa1438370-mRNA-1:exon:11217;Parent=Msa1438370-mRNA-1 |
| tig0028543 | exon | 23947 | 23991 | 23947 | ID=Msa1438370-mRNA-1:exon:11216;Parent=Msa1438370-mRNA-1 |
| tig0028543 | exon | 24140 | 24394 | 24140 | ID=Msa1438370-mRNA-1:exon:11215;Parent=Msa1438370-mRNA-1 |
| tig0028543 | five_prime_UTR | 24248 | 24394 | 24248 | ID=Msa1438370-mRNA-1:five_prime_utr;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 24140 | 24247 | 24140 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 23947 | 23991 | 23947 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 22765 | 23402 | 22765 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 22541 | 22688 | 22541 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 22279 | 22455 | 22279 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 21890 | 21958 | 21890 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 21703 | 21792 | 21703 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 18905 | 19063 | 18905 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 18597 | 18821 | 18597 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | CDS | 18298 | 18489 | 18298 | ID=Msa1438370-mRNA-1:cds;Parent=Msa1438370-mRNA-1 |
| tig0028543 | three_prime_UTR | 17973 | 18297 | 17973 | ID=Msa1438370-mRNA-1:three_prime_utr;Parent=Msa1438370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
