AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0610190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610190 MtrunA17_Chr8g0382331 97.665 514 12 0 1 514 1 514 0.0 1023
Msa0610190 MtrunA17_Chr8g0382381 78.876 516 104 3 1 514 2 514 0.0 827
Msa0610190 MtrunA17_Chr8g0382321 76.448 518 83 4 1 514 2 484 0.0 731
Msa0610190 MtrunA17_Chr5g0425781 70.860 477 135 1 1 473 1 477 0.0 691
Msa0610190 MtrunA17_Chr5g0403601 42.333 463 249 3 5 455 38 494 4.04e-112 341
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610190 AT5G10190.1 69.485 485 143 2 1 480 1 485 0.0 686
Msa0610190 AT1G78130.1 70.488 471 136 2 1 468 1 471 0.0 659
Msa0610190 AT5G10190.2 71.594 345 98 0 1 345 1 345 6.05e-176 499
Msa0610190 AT5G10190.3 64.326 356 122 2 130 480 1 356 8.40e-165 471
Msa0610190 AT4G36790.1 41.907 451 258 2 5 455 42 488 8.27e-118 356
Msa0610190 AT2G18590.1 38.126 459 264 6 12 455 19 472 2.29e-95 298

Find 116 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCCTGTTGTTGGATTAT+TGG 0.114248 4_2:+57903749 Msa0610190:CDS
TTTATAGTTTCTGCTTCATT+TGG 0.212769 4_2:+57903186 Msa0610190:CDS
CATCTCCTCCACCTTCTTAC+AGG 0.213357 4_2:+57902337 Msa0610190:CDS
GGAACTATTTCTGCAAATAT+TGG 0.230215 4_2:-57903660 None:intergenic
GGAAACCTTGGAAGTATTAT+TGG 0.246283 4_2:+57902805 Msa0610190:CDS
ACATCAATCTTTGGTATATC+TGG 0.252770 4_2:+57902856 Msa0610190:CDS
GCTTCATTTGGGTCTTTGTT+TGG 0.258137 4_2:+57903198 Msa0610190:CDS
GTTTGTCATTTGCCACTCTT+TGG 0.291019 4_2:+57903112 Msa0610190:CDS
TCATTTGCTCCTCCTGTTGT+TGG 0.303303 4_2:+57903741 Msa0610190:CDS
ATGGTACAACAGCAATTCTT+TGG 0.311013 4_2:+57903157 Msa0610190:CDS
ACTCTTTGGTTAGAACTAAT+AGG 0.318083 4_2:+57903126 Msa0610190:CDS
ACGGAATCAGAAGATCCTTT+TGG 0.318779 4_2:-57903801 None:intergenic
TAGTGTTATAGTTGGTATAT+TGG 0.339062 4_2:+57902912 Msa0610190:CDS
GTTAGTTGCCGGAGCATTCC+AGG 0.341774 4_2:-57903400 None:intergenic
TCTTTACCATTCAGTTCATT+TGG 0.343385 4_2:-57904056 None:intergenic
AGCAACCGTGGTGTGGCATT+TGG 0.346177 4_2:+57902766 Msa0610190:CDS
TTATAGTTTCTGCTTCATTT+GGG 0.358433 4_2:+57903187 Msa0610190:CDS
AGCAAGAATGGTTGCATTAG+AGG 0.370278 4_2:+57903956 Msa0610190:CDS
AACATTATTCTCCCAGTGTT+TGG 0.370317 4_2:-57903255 None:intergenic
GCCACAATTATTTGAAATGA+TGG 0.370340 4_2:-57903057 None:intergenic
AGTACATACTTGTTAGTTGC+CGG 0.383635 4_2:-57903411 None:intergenic
AACTCTATGTTCTCTTCCCT+TGG 0.389261 4_2:-57904110 None:intergenic
CACAGCCTTCATGCATGGTC+TGG 0.391306 4_2:+57903350 Msa0610190:CDS
TTCGGATCATTCCCATGGTC+AGG 0.397476 4_2:+57903090 Msa0610190:CDS
GCAACTAGAGACTGAATTGC+TGG 0.405446 4_2:-57902727 None:intergenic
CTAGCCTCAACATCAATCTT+TGG 0.405866 4_2:+57902847 Msa0610190:CDS
ATTTCAAATAATTGTGGCTC+AGG 0.406137 4_2:+57903062 Msa0610190:CDS
CCCAGTGTTTGGTAACCTTA+GGG 0.407743 4_2:-57903244 None:intergenic
TCCCAGTGTTTGGTAACCTT+AGG 0.412919 4_2:-57903245 None:intergenic
TCGGACAGCTATATATGCTT+TGG 0.413358 4_2:+57903692 Msa0610190:CDS
GCAACCGTGGTGTGGCATTT+GGG 0.418380 4_2:+57902767 Msa0610190:CDS
TTTGGGTGGCTACAACTAAC+AGG 0.432702 4_2:+57902784 Msa0610190:CDS
TTGGGTCTTTGTTTGGAGGA+TGG 0.443339 4_2:+57903205 Msa0610190:CDS
TGTGCCAATAATCCAACAAC+AGG 0.446669 4_2:-57903753 None:intergenic
CCGTTGAAATCGAAACAGAT+AGG 0.449263 4_2:+57903820 Msa0610190:CDS
TCTTTGTTTGGAGGATGGTT+CGG 0.449715 4_2:+57903210 Msa0610190:CDS
CTTGCTCGATCTCTGTCTCT+CGG 0.450052 4_2:-57903939 None:intergenic
TCAAGAGGTTTAAATGGCAT+TGG 0.458310 4_2:+57902688 Msa0610190:CDS
AGACAGAGATCGAGCAAGAA+TGG 0.461109 4_2:+57903944 Msa0610190:CDS
AACGCTGATCCAACTGCGTT+AGG 0.461170 4_2:+57902179 Msa0610190:CDS
AAGGCTGTGGATGGATCATC+AGG 0.468694 4_2:-57903336 None:intergenic
TCAATCATTCTGTTACCCTC+TGG 0.472188 4_2:+57902229 Msa0610190:CDS
TCATGGGATTTGCTACATCC+TGG 0.472233 4_2:+57903382 Msa0610190:CDS
CACACCACGGTTGCTATCAA+TGG 0.472389 4_2:-57902758 None:intergenic
TGCTAAAGGAACAGCTGAAC+CGG 0.473221 4_2:-57903292 None:intergenic
TCATTTGGGTCTTTGTTTGG+AGG 0.477996 4_2:+57903201 Msa0610190:CDS
CTGTAAGAAGGTGGAGGAGA+TGG 0.486917 4_2:-57902336 None:intergenic
CGTGCACATGTTATTGCTCT+AGG 0.489987 4_2:+57902278 Msa0610190:CDS
GCATTGATTAGTGTTATAGT+TGG 0.491293 4_2:+57902904 Msa0610190:CDS
GGCTATAGACCAGTTCCAAA+AGG 0.492838 4_2:+57903786 Msa0610190:CDS
TCGGAGATTACTTATCCCTA+AGG 0.494647 4_2:+57903229 Msa0610190:CDS
ATAGCTGTCCGAGACTTCTC+AGG 0.494960 4_2:-57903681 None:intergenic
TCCATCATTTCAAATAATTG+TGG 0.500995 4_2:+57903056 Msa0610190:CDS
TTAGAACCAAATGAACTGAA+TGG 0.503151 4_2:+57904050 Msa0610190:CDS
AACAGCAGAACGGCTGCTAA+AGG 0.504637 4_2:-57903306 None:intergenic
TTGCTCGATCTCTGTCTCTC+GGG 0.510352 4_2:-57903938 None:intergenic
CTCTCGGGTATGTGCAGTAA+AGG 0.511918 4_2:-57903923 None:intergenic
TGCTACATCCTGGAATGCTC+CGG 0.525885 4_2:+57903392 Msa0610190:CDS
CCAACTTCTTTGTATACTCC+TGG 0.527749 4_2:-57902146 None:intergenic
GTAAATAAGAACCTGTAAGA+AGG 0.528322 4_2:-57902348 None:intergenic
CAATCTTTGGTATATCTGGT+TGG 0.529034 4_2:+57902860 Msa0610190:CDS
ATGATGATTTAGATTATCCA+AGG 0.529774 4_2:+57904093 Msa0610190:CDS
CCTATCTGTTTCGATTTCAA+CGG 0.536774 4_2:-57903820 None:intergenic
GCTGATGAGTCATTGCTGCC+AGG 0.538215 4_2:+57902128 Msa0610190:CDS
TGAAGCAGAAACTATAAAGA+AGG 0.539808 4_2:-57903181 None:intergenic
CGTTGAAATCGAAACAGATA+GGG 0.541194 4_2:+57903821 Msa0610190:CDS
TCCCTAAGGTTACCAAACAC+TGG 0.543152 4_2:+57903243 Msa0610190:CDS
TATACCAAAGATTGATGTTG+AGG 0.552826 4_2:-57902851 None:intergenic
CCCTAAGGTTACCAAACACT+GGG 0.556080 4_2:+57903244 Msa0610190:CDS
AACCTTGGAAGTATTATTGG+TGG 0.556204 4_2:+57902808 Msa0610190:CDS
TTTAATAAAAGAAGCAAAAG+CGG 0.556479 4_2:+57903023 Msa0610190:CDS
AAATAGTTCCTGAGAAGTCT+CGG 0.558192 4_2:+57903673 Msa0610190:CDS
TTATTTCAGAATAAAAGGAC+TGG 0.558591 4_2:-57902996 None:intergenic
GTGAGGGAACCTAACGCAGT+TGG 0.559692 4_2:-57902188 None:intergenic
ATGCAGACACAAAGTGTCAA+AGG 0.562578 4_2:-57903891 None:intergenic
CCAGGAGTATACAAAGAAGT+TGG 0.569677 4_2:+57902146 Msa0610190:CDS
CACGATTGTGTCGCGTGGCG+AGG 0.573750 4_2:-57902259 None:intergenic
CTACAACTAACAGGAAACCT+TGG 0.573919 4_2:+57902793 Msa0610190:CDS
CCATCCACAGCCTTCATGCA+TGG 0.574542 4_2:+57903345 Msa0610190:CDS
CCATGCATGAAGGCTGTGGA+TGG 0.574600 4_2:-57903345 None:intergenic
CAGACCATGCATGAAGGCTG+TGG 0.579264 4_2:-57903349 None:intergenic
GACCACCAATAATACTTCCA+AGG 0.580854 4_2:-57902810 None:intergenic
ATGTTATCACAAATAAGTGC+CGG 0.589775 4_2:+57903273 Msa0610190:CDS
TTTCAAATAATTGTGGCTCA+GGG 0.595267 4_2:+57903063 Msa0610190:CDS
AAGAACCTGTAAGAAGGTGG+AGG 0.596913 4_2:-57902342 None:intergenic
GCAAATGACAAACCTGACCA+TGG 0.597618 4_2:-57903102 None:intergenic
AGAAATGCAGCAACTAGAGG+TGG 0.598755 4_2:+57903983 Msa0610190:CDS
GAAGGCAGAGACGTTGACAT+TGG 0.604050 4_2:+57902073 Msa0610190:CDS
CAAATGACAAACCTGACCAT+GGG 0.604095 4_2:-57903101 None:intergenic
GGAGATGGCGACGAGGAATG+TGG 0.604110 4_2:-57902321 None:intergenic
CATTGATAGCAACCGTGGTG+TGG 0.609671 4_2:+57902759 Msa0610190:CDS
AGAATGATTGAACAAGGGAT+CGG 0.609997 4_2:-57902217 None:intergenic
CTGAATTGCTGGAATTACAA+TGG 0.612577 4_2:-57902716 None:intergenic
GGTAACAGAATGATTGAACA+AGG 0.615802 4_2:-57902223 None:intergenic
CAAGGGATCGGAAAAGAGTG+AGG 0.615891 4_2:-57902205 None:intergenic
AATAAGAACCTGTAAGAAGG+TGG 0.616116 4_2:-57902345 None:intergenic
AAATGCAGCATCACTCGCCA+AGG 0.617202 4_2:+57903845 Msa0610190:CDS
GCCAATAATCCAACAACAGG+AGG 0.618850 4_2:-57903750 None:intergenic
TAAAACCAGACCATGCATGA+AGG 0.622116 4_2:-57903355 None:intergenic
ATCAGAAATGCAGCAACTAG+AGG 0.627643 4_2:+57903980 Msa0610190:CDS
ACCACGGTTGCTATCAATGG+TGG 0.632248 4_2:-57902755 None:intergenic
AGAGACGTTGACATTGGTGC+TGG 0.637129 4_2:+57902079 Msa0610190:CDS
ACCGTGGTGTGGCATTTGGG+TGG 0.638640 4_2:+57902770 Msa0610190:CDS
CCTTGCATATGTGAACTACC+GGG 0.641465 4_2:-57904162 None:intergenic
TGGCGAGGTAAGCAGCCAGA+GGG 0.643316 4_2:-57902244 None:intergenic
TATTAGTTCTAACCAAAGAG+TGG 0.649205 4_2:-57903124 None:intergenic
GTGGCGAGGTAAGCAGCCAG+AGG 0.660424 4_2:-57902245 None:intergenic
GAACTAATAGGCTTCTCACA+TGG 0.667993 4_2:+57903138 Msa0610190:CDS
TGATGATTTAGATTATCCAA+GGG 0.671852 4_2:+57904094 Msa0610190:CDS
AAGGGATCGGAAAAGAGTGA+GGG 0.678118 4_2:-57902204 None:intergenic
TCCACCATTGATAGCAACCG+TGG 0.681448 4_2:+57902754 Msa0610190:CDS
AGGTGGAGGAGATGGCGACG+AGG 0.683207 4_2:-57902328 None:intergenic
AGGCAGCATTAACAGCAGAA+CGG 0.684535 4_2:-57903316 None:intergenic
GCCACCCAAATGCCACACCA+CGG 0.691633 4_2:-57902771 None:intergenic
GTAACAGAATGATTGAACAA+GGG 0.709064 4_2:-57902222 None:intergenic
ATGTGCACGATTGTGTCGCG+TGG 0.710569 4_2:-57902264 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTCAAAATTTAACTATT+TGG + chr4_2:57903632-57903651 Msa0610190:intron 10.0%
!!! TTTTTCAAAATTTAACTATT+TGG + chr4_2:57903632-57903651 Msa0610190:intron 10.0%
!! ACATTATTAATCTATGTATT+TGG + chr4_2:57902594-57902613 Msa0610190:intron 15.0%
!!! ATCTTTTATTTCAGAATAAA+AGG - chr4_2:57903004-57903023 None:intergenic 15.0%
!! ATATGCTAGAAAATTAATAA+AGG - chr4_2:57903452-57903471 None:intergenic 15.0%
!!! AATTTTGTATATATCCTAAA+AGG + chr4_2:57903507-57903526 Msa0610190:intron 15.0%
!! ACATTATTAATCTATGTATT+TGG + chr4_2:57902594-57902613 Msa0610190:intron 15.0%
!!! ATCTTTTATTTCAGAATAAA+AGG - chr4_2:57903004-57903023 None:intergenic 15.0%
!! ATATGCTAGAAAATTAATAA+AGG - chr4_2:57903452-57903471 None:intergenic 15.0%
!!! AATTTTGTATATATCCTAAA+AGG + chr4_2:57903507-57903526 Msa0610190:intron 15.0%
!!! AGTTTTGCATAAATATGATT+AGG + chr4_2:57902657-57902676 Msa0610190:intron 20.0%
!! TTTAATAAAAGAAGCAAAAG+CGG + chr4_2:57903023-57903042 Msa0610190:CDS 20.0%
!! TTGAGTTACTATATATAGTT+AGG - chr4_2:57903561-57903580 None:intergenic 20.0%
!!! AAATATTAATGACTTGCAAA+CGG - chr4_2:57903614-57903633 None:intergenic 20.0%
!!! AGTTTTGCATAAATATGATT+AGG + chr4_2:57902657-57902676 Msa0610190:intron 20.0%
!! TTTAATAAAAGAAGCAAAAG+CGG + chr4_2:57903023-57903042 Msa0610190:CDS 20.0%
!! TTGAGTTACTATATATAGTT+AGG - chr4_2:57903561-57903580 None:intergenic 20.0%
!!! AAATATTAATGACTTGCAAA+CGG - chr4_2:57903614-57903633 None:intergenic 20.0%
! ATATGTTGAAACAAGTCAAA+AGG - chr4_2:57902378-57902397 None:intergenic 25.0%
!! GGTAGTACTAAATGAAATTT+TGG + chr4_2:57902458-57902477 Msa0610190:intron 25.0%
! TATTTGGTAAGTATAGTGAA+TGG + chr4_2:57902610-57902629 Msa0610190:intron 25.0%
! TTTGCATAAATATGATTAGG+TGG + chr4_2:57902660-57902679 Msa0610190:intron 25.0%
!! TAGTGTTATAGTTGGTATAT+TGG + chr4_2:57902912-57902931 Msa0610190:CDS 25.0%
!!! TGATAACTGTTGTCATTTTT+TGG - chr4_2:57902967-57902986 None:intergenic 25.0%
! TTATTTCAGAATAAAAGGAC+TGG - chr4_2:57902999-57903018 None:intergenic 25.0%
! TCCATCATTTCAAATAATTG+TGG + chr4_2:57903056-57903075 Msa0610190:CDS 25.0%
! TTTATAGTTTCTGCTTCATT+TGG + chr4_2:57903186-57903205 Msa0610190:CDS 25.0%
! TTATAGTTTCTGCTTCATTT+GGG + chr4_2:57903187-57903206 Msa0610190:CDS 25.0%
!! CCATTTTAGATTTTCCTTTT+AGG - chr4_2:57903524-57903543 None:intergenic 25.0%
! CCTAAAAGGAAAATCTAAAA+TGG + chr4_2:57903521-57903540 Msa0610190:intron 25.0%
!! ATCTAAAATGGTAACTTCTT+AGG + chr4_2:57903533-57903552 Msa0610190:intron 25.0%
!! TTATTGGCACAAAATGTTTT+TGG + chr4_2:57903765-57903784 Msa0610190:CDS 25.0%
! ATGATGATTTAGATTATCCA+AGG + chr4_2:57904093-57904112 Msa0610190:CDS 25.0%
! TGATGATTTAGATTATCCAA+GGG + chr4_2:57904094-57904113 Msa0610190:CDS 25.0%
! ATATGTTGAAACAAGTCAAA+AGG - chr4_2:57902378-57902397 None:intergenic 25.0%
!! GGTAGTACTAAATGAAATTT+TGG + chr4_2:57902458-57902477 Msa0610190:intron 25.0%
! TATTTGGTAAGTATAGTGAA+TGG + chr4_2:57902610-57902629 Msa0610190:intron 25.0%
! TTTGCATAAATATGATTAGG+TGG + chr4_2:57902660-57902679 Msa0610190:intron 25.0%
!! TAGTGTTATAGTTGGTATAT+TGG + chr4_2:57902912-57902931 Msa0610190:CDS 25.0%
!!! TGATAACTGTTGTCATTTTT+TGG - chr4_2:57902967-57902986 None:intergenic 25.0%
! TTATTTCAGAATAAAAGGAC+TGG - chr4_2:57902999-57903018 None:intergenic 25.0%
! TCCATCATTTCAAATAATTG+TGG + chr4_2:57903056-57903075 Msa0610190:CDS 25.0%
! TTTATAGTTTCTGCTTCATT+TGG + chr4_2:57903186-57903205 Msa0610190:CDS 25.0%
! TTATAGTTTCTGCTTCATTT+GGG + chr4_2:57903187-57903206 Msa0610190:CDS 25.0%
!! CCATTTTAGATTTTCCTTTT+AGG - chr4_2:57903524-57903543 None:intergenic 25.0%
! CCTAAAAGGAAAATCTAAAA+TGG + chr4_2:57903521-57903540 Msa0610190:intron 25.0%
!! ATCTAAAATGGTAACTTCTT+AGG + chr4_2:57903533-57903552 Msa0610190:intron 25.0%
!! TTATTGGCACAAAATGTTTT+TGG + chr4_2:57903765-57903784 Msa0610190:CDS 25.0%
! ATGATGATTTAGATTATCCA+AGG + chr4_2:57904093-57904112 Msa0610190:CDS 25.0%
! TGATGATTTAGATTATCCAA+GGG + chr4_2:57904094-57904113 Msa0610190:CDS 25.0%
GTAACAGAATGATTGAACAA+GGG - chr4_2:57902225-57902244 None:intergenic 30.0%
GTAAATAAGAACCTGTAAGA+AGG - chr4_2:57902351-57902370 None:intergenic 30.0%
TCAACATATCTGTACTTGTT+TGG + chr4_2:57902389-57902408 Msa0610190:intron 30.0%
ACTTGAACCAAAATTTCATG+TGG - chr4_2:57902415-57902434 None:intergenic 30.0%
!!! ACTTTTATTTTGCCTAGACT+TGG + chr4_2:57902437-57902456 Msa0610190:intron 30.0%
!! GCATTTTCAAGAGGTTTAAA+TGG + chr4_2:57902682-57902701 Msa0610190:CDS 30.0%
TATACCAAAGATTGATGTTG+AGG - chr4_2:57902854-57902873 None:intergenic 30.0%
ACATCAATCTTTGGTATATC+TGG + chr4_2:57902856-57902875 Msa0610190:CDS 30.0%
!! GCATTGATTAGTGTTATAGT+TGG + chr4_2:57902904-57902923 Msa0610190:CDS 30.0%
!!! TTGTCATTTTTTGGAAAGTG+TGG - chr4_2:57902958-57902977 None:intergenic 30.0%
! GCCACAATTATTTGAAATGA+TGG - chr4_2:57903060-57903079 None:intergenic 30.0%
ATTTCAAATAATTGTGGCTC+AGG + chr4_2:57903062-57903081 Msa0610190:CDS 30.0%
TTTCAAATAATTGTGGCTCA+GGG + chr4_2:57903063-57903082 Msa0610190:CDS 30.0%
!! TATTAGTTCTAACCAAAGAG+TGG - chr4_2:57903127-57903146 None:intergenic 30.0%
ACTCTTTGGTTAGAACTAAT+AGG + chr4_2:57903126-57903145 Msa0610190:CDS 30.0%
TGAAGCAGAAACTATAAAGA+AGG - chr4_2:57903184-57903203 None:intergenic 30.0%
ATGTTATCACAAATAAGTGC+CGG + chr4_2:57903273-57903292 Msa0610190:CDS 30.0%
!! GGAACTATTTCTGCAAATAT+TGG - chr4_2:57903663-57903682 None:intergenic 30.0%
TTAGAACCAAATGAACTGAA+TGG + chr4_2:57904050-57904069 Msa0610190:CDS 30.0%
TCTTTACCATTCAGTTCATT+TGG - chr4_2:57904059-57904078 None:intergenic 30.0%
GTAACAGAATGATTGAACAA+GGG - chr4_2:57902225-57902244 None:intergenic 30.0%
GTAAATAAGAACCTGTAAGA+AGG - chr4_2:57902351-57902370 None:intergenic 30.0%
TCAACATATCTGTACTTGTT+TGG + chr4_2:57902389-57902408 Msa0610190:intron 30.0%
ACTTGAACCAAAATTTCATG+TGG - chr4_2:57902415-57902434 None:intergenic 30.0%
!!! ACTTTTATTTTGCCTAGACT+TGG + chr4_2:57902437-57902456 Msa0610190:intron 30.0%
!! GCATTTTCAAGAGGTTTAAA+TGG + chr4_2:57902682-57902701 Msa0610190:CDS 30.0%
TATACCAAAGATTGATGTTG+AGG - chr4_2:57902854-57902873 None:intergenic 30.0%
ACATCAATCTTTGGTATATC+TGG + chr4_2:57902856-57902875 Msa0610190:CDS 30.0%
!! GCATTGATTAGTGTTATAGT+TGG + chr4_2:57902904-57902923 Msa0610190:CDS 30.0%
!!! TTGTCATTTTTTGGAAAGTG+TGG - chr4_2:57902958-57902977 None:intergenic 30.0%
! GCCACAATTATTTGAAATGA+TGG - chr4_2:57903060-57903079 None:intergenic 30.0%
ATTTCAAATAATTGTGGCTC+AGG + chr4_2:57903062-57903081 Msa0610190:CDS 30.0%
TTTCAAATAATTGTGGCTCA+GGG + chr4_2:57903063-57903082 Msa0610190:CDS 30.0%
!! TATTAGTTCTAACCAAAGAG+TGG - chr4_2:57903127-57903146 None:intergenic 30.0%
ACTCTTTGGTTAGAACTAAT+AGG + chr4_2:57903126-57903145 Msa0610190:CDS 30.0%
TGAAGCAGAAACTATAAAGA+AGG - chr4_2:57903184-57903203 None:intergenic 30.0%
ATGTTATCACAAATAAGTGC+CGG + chr4_2:57903273-57903292 Msa0610190:CDS 30.0%
!! GGAACTATTTCTGCAAATAT+TGG - chr4_2:57903663-57903682 None:intergenic 30.0%
TTAGAACCAAATGAACTGAA+TGG + chr4_2:57904050-57904069 Msa0610190:CDS 30.0%
TCTTTACCATTCAGTTCATT+TGG - chr4_2:57904059-57904078 None:intergenic 30.0%
AGAATGATTGAACAAGGGAT+CGG - chr4_2:57902220-57902239 None:intergenic 35.0%
GGTAACAGAATGATTGAACA+AGG - chr4_2:57902226-57902245 None:intergenic 35.0%
AATAAGAACCTGTAAGAAGG+TGG - chr4_2:57902348-57902367 None:intergenic 35.0%
TTGAAACAAGTCAAAAGGAG+AGG - chr4_2:57902373-57902392 None:intergenic 35.0%
! TGTTTGGCCACATGAAATTT+TGG + chr4_2:57902405-57902424 Msa0610190:intron 35.0%
CATTTAGTACTACCAAGTCT+AGG - chr4_2:57902452-57902471 None:intergenic 35.0%
ACAGTTAGTGTAGAAGTTGT+TGG + chr4_2:57902507-57902526 Msa0610190:intron 35.0%
CAGTTAGTGTAGAAGTTGTT+GGG + chr4_2:57902508-57902527 Msa0610190:intron 35.0%
TCAAGAGGTTTAAATGGCAT+TGG + chr4_2:57902688-57902707 Msa0610190:CDS 35.0%
CTGAATTGCTGGAATTACAA+TGG - chr4_2:57902719-57902738 None:intergenic 35.0%
!! GGAAACCTTGGAAGTATTAT+TGG + chr4_2:57902805-57902824 Msa0610190:CDS 35.0%
!! AACCTTGGAAGTATTATTGG+TGG + chr4_2:57902808-57902827 Msa0610190:CDS 35.0%
CAATCTTTGGTATATCTGGT+TGG + chr4_2:57902860-57902879 Msa0610190:CDS 35.0%
! TTGGAGAATAGCTTTTCATC+TGG + chr4_2:57902879-57902898 Msa0610190:CDS 35.0%
ATGGTACAACAGCAATTCTT+TGG + chr4_2:57903157-57903176 Msa0610190:CDS 35.0%
AACATTATTCTCCCAGTGTT+TGG - chr4_2:57903258-57903277 None:intergenic 35.0%
!!! TGGTCTGGTTTTAGTTATCA+TGG + chr4_2:57903365-57903384 Msa0610190:CDS 35.0%
!!! GGTCTGGTTTTAGTTATCAT+GGG + chr4_2:57903366-57903385 Msa0610190:CDS 35.0%
! AGTACATACTTGTTAGTTGC+CGG - chr4_2:57903414-57903433 None:intergenic 35.0%
AAATAGTTCCTGAGAAGTCT+CGG + chr4_2:57903673-57903692 Msa0610190:CDS 35.0%
CCTATCTGTTTCGATTTCAA+CGG - chr4_2:57903823-57903842 None:intergenic 35.0%
CGTTGAAATCGAAACAGATA+GGG + chr4_2:57903821-57903840 Msa0610190:CDS 35.0%
AAAAACAATACAGATCGCCT+TGG - chr4_2:57903865-57903884 None:intergenic 35.0%
AGAATGATTGAACAAGGGAT+CGG - chr4_2:57902220-57902239 None:intergenic 35.0%
GGTAACAGAATGATTGAACA+AGG - chr4_2:57902226-57902245 None:intergenic 35.0%
AATAAGAACCTGTAAGAAGG+TGG - chr4_2:57902348-57902367 None:intergenic 35.0%
TTGAAACAAGTCAAAAGGAG+AGG - chr4_2:57902373-57902392 None:intergenic 35.0%
! TGTTTGGCCACATGAAATTT+TGG + chr4_2:57902405-57902424 Msa0610190:intron 35.0%
CATTTAGTACTACCAAGTCT+AGG - chr4_2:57902452-57902471 None:intergenic 35.0%
ACAGTTAGTGTAGAAGTTGT+TGG + chr4_2:57902507-57902526 Msa0610190:intron 35.0%
CAGTTAGTGTAGAAGTTGTT+GGG + chr4_2:57902508-57902527 Msa0610190:intron 35.0%
TCAAGAGGTTTAAATGGCAT+TGG + chr4_2:57902688-57902707 Msa0610190:CDS 35.0%
CTGAATTGCTGGAATTACAA+TGG - chr4_2:57902719-57902738 None:intergenic 35.0%
!! GGAAACCTTGGAAGTATTAT+TGG + chr4_2:57902805-57902824 Msa0610190:CDS 35.0%
!! AACCTTGGAAGTATTATTGG+TGG + chr4_2:57902808-57902827 Msa0610190:CDS 35.0%
CAATCTTTGGTATATCTGGT+TGG + chr4_2:57902860-57902879 Msa0610190:CDS 35.0%
! TTGGAGAATAGCTTTTCATC+TGG + chr4_2:57902879-57902898 Msa0610190:CDS 35.0%
ATGGTACAACAGCAATTCTT+TGG + chr4_2:57903157-57903176 Msa0610190:CDS 35.0%
AACATTATTCTCCCAGTGTT+TGG - chr4_2:57903258-57903277 None:intergenic 35.0%
!!! TGGTCTGGTTTTAGTTATCA+TGG + chr4_2:57903365-57903384 Msa0610190:CDS 35.0%
!!! GGTCTGGTTTTAGTTATCAT+GGG + chr4_2:57903366-57903385 Msa0610190:CDS 35.0%
! AGTACATACTTGTTAGTTGC+CGG - chr4_2:57903414-57903433 None:intergenic 35.0%
AAATAGTTCCTGAGAAGTCT+CGG + chr4_2:57903673-57903692 Msa0610190:CDS 35.0%
CCTATCTGTTTCGATTTCAA+CGG - chr4_2:57903823-57903842 None:intergenic 35.0%
CGTTGAAATCGAAACAGATA+GGG + chr4_2:57903821-57903840 Msa0610190:CDS 35.0%
AAAAACAATACAGATCGCCT+TGG - chr4_2:57903865-57903884 None:intergenic 35.0%
CCAACTTCTTTGTATACTCC+TGG - chr4_2:57902149-57902168 None:intergenic 40.0%
! CCAGGAGTATACAAAGAAGT+TGG + chr4_2:57902146-57902165 Msa0610190:CDS 40.0%
TCAATCATTCTGTTACCCTC+TGG + chr4_2:57902229-57902248 Msa0610190:CDS 40.0%
!! TTGCTCTAGGTGCTTTTCTT+TGG + chr4_2:57902291-57902310 Msa0610190:CDS 40.0%
!! TGCTCTAGGTGCTTTTCTTT+GGG + chr4_2:57902292-57902311 Msa0610190:CDS 40.0%
! CATTCACTATTAGCTCTCAC+TGG - chr4_2:57902574-57902593 None:intergenic 40.0%
!! GATTAGGTGGCATTTTCAAG+AGG + chr4_2:57902673-57902692 Msa0610190:intron 40.0%
CTACAACTAACAGGAAACCT+TGG + chr4_2:57902793-57902812 Msa0610190:CDS 40.0%
GACCACCAATAATACTTCCA+AGG - chr4_2:57902813-57902832 None:intergenic 40.0%
CTAGCCTCAACATCAATCTT+TGG + chr4_2:57902847-57902866 Msa0610190:CDS 40.0%
CAAATGACAAACCTGACCAT+GGG - chr4_2:57903104-57903123 None:intergenic 40.0%
! GTTTGTCATTTGCCACTCTT+TGG + chr4_2:57903112-57903131 Msa0610190:CDS 40.0%
GAACTAATAGGCTTCTCACA+TGG + chr4_2:57903138-57903157 Msa0610190:CDS 40.0%
GCTTCATTTGGGTCTTTGTT+TGG + chr4_2:57903198-57903217 Msa0610190:CDS 40.0%
! TCATTTGGGTCTTTGTTTGG+AGG + chr4_2:57903201-57903220 Msa0610190:CDS 40.0%
! TCTTTGTTTGGAGGATGGTT+CGG + chr4_2:57903210-57903229 Msa0610190:CDS 40.0%
TCGGAGATTACTTATCCCTA+AGG + chr4_2:57903229-57903248 Msa0610190:CDS 40.0%
TAAAACCAGACCATGCATGA+AGG - chr4_2:57903358-57903377 None:intergenic 40.0%
TCGGACAGCTATATATGCTT+TGG + chr4_2:57903692-57903711 Msa0610190:CDS 40.0%
TCCTCCTGTTGTTGGATTAT+TGG + chr4_2:57903749-57903768 Msa0610190:CDS 40.0%
TGTGCCAATAATCCAACAAC+AGG - chr4_2:57903756-57903775 None:intergenic 40.0%
!!! TCAGAAGATCCTTTTGGAAC+TGG - chr4_2:57903798-57903817 None:intergenic 40.0%
! ACGGAATCAGAAGATCCTTT+TGG - chr4_2:57903804-57903823 None:intergenic 40.0%
CCGTTGAAATCGAAACAGAT+AGG + chr4_2:57903820-57903839 Msa0610190:CDS 40.0%
! ATGCAGACACAAAGTGTCAA+AGG - chr4_2:57903894-57903913 None:intergenic 40.0%
AGCAAGAATGGTTGCATTAG+AGG + chr4_2:57903956-57903975 Msa0610190:CDS 40.0%
ATCAGAAATGCAGCAACTAG+AGG + chr4_2:57903980-57903999 Msa0610190:CDS 40.0%
AACTCTATGTTCTCTTCCCT+TGG - chr4_2:57904113-57904132 None:intergenic 40.0%
!!! ACGAGAAAGTTTTGTTGTCC+CGG + chr4_2:57904144-57904163 Msa0610190:CDS 40.0%
CCAACTTCTTTGTATACTCC+TGG - chr4_2:57902149-57902168 None:intergenic 40.0%
! CCAGGAGTATACAAAGAAGT+TGG + chr4_2:57902146-57902165 Msa0610190:CDS 40.0%
TCAATCATTCTGTTACCCTC+TGG + chr4_2:57902229-57902248 Msa0610190:CDS 40.0%
!! TTGCTCTAGGTGCTTTTCTT+TGG + chr4_2:57902291-57902310 Msa0610190:CDS 40.0%
!! TGCTCTAGGTGCTTTTCTTT+GGG + chr4_2:57902292-57902311 Msa0610190:CDS 40.0%
! CATTCACTATTAGCTCTCAC+TGG - chr4_2:57902574-57902593 None:intergenic 40.0%
!! GATTAGGTGGCATTTTCAAG+AGG + chr4_2:57902673-57902692 Msa0610190:intron 40.0%
CTACAACTAACAGGAAACCT+TGG + chr4_2:57902793-57902812 Msa0610190:CDS 40.0%
GACCACCAATAATACTTCCA+AGG - chr4_2:57902813-57902832 None:intergenic 40.0%
CTAGCCTCAACATCAATCTT+TGG + chr4_2:57902847-57902866 Msa0610190:CDS 40.0%
CAAATGACAAACCTGACCAT+GGG - chr4_2:57903104-57903123 None:intergenic 40.0%
! GTTTGTCATTTGCCACTCTT+TGG + chr4_2:57903112-57903131 Msa0610190:CDS 40.0%
GAACTAATAGGCTTCTCACA+TGG + chr4_2:57903138-57903157 Msa0610190:CDS 40.0%
GCTTCATTTGGGTCTTTGTT+TGG + chr4_2:57903198-57903217 Msa0610190:CDS 40.0%
! TCATTTGGGTCTTTGTTTGG+AGG + chr4_2:57903201-57903220 Msa0610190:CDS 40.0%
! TCTTTGTTTGGAGGATGGTT+CGG + chr4_2:57903210-57903229 Msa0610190:CDS 40.0%
TCGGAGATTACTTATCCCTA+AGG + chr4_2:57903229-57903248 Msa0610190:CDS 40.0%
TAAAACCAGACCATGCATGA+AGG - chr4_2:57903358-57903377 None:intergenic 40.0%
TCGGACAGCTATATATGCTT+TGG + chr4_2:57903692-57903711 Msa0610190:CDS 40.0%
TCCTCCTGTTGTTGGATTAT+TGG + chr4_2:57903749-57903768 Msa0610190:CDS 40.0%
TGTGCCAATAATCCAACAAC+AGG - chr4_2:57903756-57903775 None:intergenic 40.0%
!!! TCAGAAGATCCTTTTGGAAC+TGG - chr4_2:57903798-57903817 None:intergenic 40.0%
! ACGGAATCAGAAGATCCTTT+TGG - chr4_2:57903804-57903823 None:intergenic 40.0%
CCGTTGAAATCGAAACAGAT+AGG + chr4_2:57903820-57903839 Msa0610190:CDS 40.0%
! ATGCAGACACAAAGTGTCAA+AGG - chr4_2:57903894-57903913 None:intergenic 40.0%
AGCAAGAATGGTTGCATTAG+AGG + chr4_2:57903956-57903975 Msa0610190:CDS 40.0%
ATCAGAAATGCAGCAACTAG+AGG + chr4_2:57903980-57903999 Msa0610190:CDS 40.0%
AACTCTATGTTCTCTTCCCT+TGG - chr4_2:57904113-57904132 None:intergenic 40.0%
!!! ACGAGAAAGTTTTGTTGTCC+CGG + chr4_2:57904144-57904163 Msa0610190:CDS 40.0%
AAGGGATCGGAAAAGAGTGA+GGG - chr4_2:57902207-57902226 None:intergenic 45.0%
CGTGCACATGTTATTGCTCT+AGG + chr4_2:57902278-57902297 Msa0610190:CDS 45.0%
AAGAACCTGTAAGAAGGTGG+AGG - chr4_2:57902345-57902364 None:intergenic 45.0%
TTCTACACTAACTGTCCCCA+TGG - chr4_2:57902502-57902521 None:intergenic 45.0%
GCAACTAGAGACTGAATTGC+TGG - chr4_2:57902730-57902749 None:intergenic 45.0%
TTTGGGTGGCTACAACTAAC+AGG + chr4_2:57902784-57902803 Msa0610190:CDS 45.0%
! ATTGTGGCTCAGGGAGTTTT+CGG + chr4_2:57903072-57903091 Msa0610190:CDS 45.0%
! GAGTTTTCGGATCATTCCCA+TGG + chr4_2:57903085-57903104 Msa0610190:CDS 45.0%
GCAAATGACAAACCTGACCA+TGG - chr4_2:57903105-57903124 None:intergenic 45.0%
! TTGGGTCTTTGTTTGGAGGA+TGG + chr4_2:57903205-57903224 Msa0610190:CDS 45.0%
TCCCTAAGGTTACCAAACAC+TGG + chr4_2:57903243-57903262 Msa0610190:CDS 45.0%
! CCCAGTGTTTGGTAACCTTA+GGG - chr4_2:57903247-57903266 None:intergenic 45.0%
CCCTAAGGTTACCAAACACT+GGG + chr4_2:57903244-57903263 Msa0610190:CDS 45.0%
! TCCCAGTGTTTGGTAACCTT+AGG - chr4_2:57903248-57903267 None:intergenic 45.0%
TGCTAAAGGAACAGCTGAAC+CGG - chr4_2:57903295-57903314 None:intergenic 45.0%
AGGCAGCATTAACAGCAGAA+CGG - chr4_2:57903319-57903338 None:intergenic 45.0%
!! TCATGGGATTTGCTACATCC+TGG + chr4_2:57903382-57903401 Msa0610190:CDS 45.0%
TCATTTGCTCCTCCTGTTGT+TGG + chr4_2:57903741-57903760 Msa0610190:CDS 45.0%
GCCAATAATCCAACAACAGG+AGG - chr4_2:57903753-57903772 None:intergenic 45.0%
GGCTATAGACCAGTTCCAAA+AGG + chr4_2:57903786-57903805 Msa0610190:CDS 45.0%
AGACAGAGATCGAGCAAGAA+TGG + chr4_2:57903944-57903963 Msa0610190:CDS 45.0%
AGAAATGCAGCAACTAGAGG+TGG + chr4_2:57903983-57904002 Msa0610190:CDS 45.0%
AAGGGATCGGAAAAGAGTGA+GGG - chr4_2:57902207-57902226 None:intergenic 45.0%
CGTGCACATGTTATTGCTCT+AGG + chr4_2:57902278-57902297 Msa0610190:CDS 45.0%
AAGAACCTGTAAGAAGGTGG+AGG - chr4_2:57902345-57902364 None:intergenic 45.0%
TTCTACACTAACTGTCCCCA+TGG - chr4_2:57902502-57902521 None:intergenic 45.0%
GCAACTAGAGACTGAATTGC+TGG - chr4_2:57902730-57902749 None:intergenic 45.0%
TTTGGGTGGCTACAACTAAC+AGG + chr4_2:57902784-57902803 Msa0610190:CDS 45.0%
! ATTGTGGCTCAGGGAGTTTT+CGG + chr4_2:57903072-57903091 Msa0610190:CDS 45.0%
! GAGTTTTCGGATCATTCCCA+TGG + chr4_2:57903085-57903104 Msa0610190:CDS 45.0%
GCAAATGACAAACCTGACCA+TGG - chr4_2:57903105-57903124 None:intergenic 45.0%
! TTGGGTCTTTGTTTGGAGGA+TGG + chr4_2:57903205-57903224 Msa0610190:CDS 45.0%
TCCCTAAGGTTACCAAACAC+TGG + chr4_2:57903243-57903262 Msa0610190:CDS 45.0%
! CCCAGTGTTTGGTAACCTTA+GGG - chr4_2:57903247-57903266 None:intergenic 45.0%
CCCTAAGGTTACCAAACACT+GGG + chr4_2:57903244-57903263 Msa0610190:CDS 45.0%
! TCCCAGTGTTTGGTAACCTT+AGG - chr4_2:57903248-57903267 None:intergenic 45.0%
TGCTAAAGGAACAGCTGAAC+CGG - chr4_2:57903295-57903314 None:intergenic 45.0%
AGGCAGCATTAACAGCAGAA+CGG - chr4_2:57903319-57903338 None:intergenic 45.0%
!! TCATGGGATTTGCTACATCC+TGG + chr4_2:57903382-57903401 Msa0610190:CDS 45.0%
TCATTTGCTCCTCCTGTTGT+TGG + chr4_2:57903741-57903760 Msa0610190:CDS 45.0%
GCCAATAATCCAACAACAGG+AGG - chr4_2:57903753-57903772 None:intergenic 45.0%
GGCTATAGACCAGTTCCAAA+AGG + chr4_2:57903786-57903805 Msa0610190:CDS 45.0%
AGACAGAGATCGAGCAAGAA+TGG + chr4_2:57903944-57903963 Msa0610190:CDS 45.0%
AGAAATGCAGCAACTAGAGG+TGG + chr4_2:57903983-57904002 Msa0610190:CDS 45.0%
GAAGGCAGAGACGTTGACAT+TGG + chr4_2:57902073-57902092 Msa0610190:CDS 50.0%
AGAGACGTTGACATTGGTGC+TGG + chr4_2:57902079-57902098 Msa0610190:CDS 50.0%
AACGCTGATCCAACTGCGTT+AGG + chr4_2:57902179-57902198 Msa0610190:CDS 50.0%
CAAGGGATCGGAAAAGAGTG+AGG - chr4_2:57902208-57902227 None:intergenic 50.0%
CTGTAAGAAGGTGGAGGAGA+TGG - chr4_2:57902339-57902358 None:intergenic 50.0%
CATCTCCTCCACCTTCTTAC+AGG + chr4_2:57902337-57902356 Msa0610190:CDS 50.0%
! TCCACCATTGATAGCAACCG+TGG + chr4_2:57902754-57902773 Msa0610190:CDS 50.0%
ACCACGGTTGCTATCAATGG+TGG - chr4_2:57902758-57902777 None:intergenic 50.0%
CACACCACGGTTGCTATCAA+TGG - chr4_2:57902761-57902780 None:intergenic 50.0%
! CATTGATAGCAACCGTGGTG+TGG + chr4_2:57902759-57902778 Msa0610190:CDS 50.0%
TTCGGATCATTCCCATGGTC+AGG + chr4_2:57903090-57903109 Msa0610190:CDS 50.0%
AACAGCAGAACGGCTGCTAA+AGG - chr4_2:57903309-57903328 None:intergenic 50.0%
AAGGCTGTGGATGGATCATC+AGG - chr4_2:57903339-57903358 None:intergenic 50.0%
TGCTACATCCTGGAATGCTC+CGG + chr4_2:57903392-57903411 Msa0610190:CDS 50.0%
ATAGCTGTCCGAGACTTCTC+AGG - chr4_2:57903684-57903703 None:intergenic 50.0%
AAATGCAGCATCACTCGCCA+AGG + chr4_2:57903845-57903864 Msa0610190:CDS 50.0%
CTCTCGGGTATGTGCAGTAA+AGG - chr4_2:57903926-57903945 None:intergenic 50.0%
TTGCTCGATCTCTGTCTCTC+GGG - chr4_2:57903941-57903960 None:intergenic 50.0%
CTTGCTCGATCTCTGTCTCT+CGG - chr4_2:57903942-57903961 None:intergenic 50.0%
GAAGGCAGAGACGTTGACAT+TGG + chr4_2:57902073-57902092 Msa0610190:CDS 50.0%
AGAGACGTTGACATTGGTGC+TGG + chr4_2:57902079-57902098 Msa0610190:CDS 50.0%
AACGCTGATCCAACTGCGTT+AGG + chr4_2:57902179-57902198 Msa0610190:CDS 50.0%
CAAGGGATCGGAAAAGAGTG+AGG - chr4_2:57902208-57902227 None:intergenic 50.0%
CTGTAAGAAGGTGGAGGAGA+TGG - chr4_2:57902339-57902358 None:intergenic 50.0%
CATCTCCTCCACCTTCTTAC+AGG + chr4_2:57902337-57902356 Msa0610190:CDS 50.0%
! TCCACCATTGATAGCAACCG+TGG + chr4_2:57902754-57902773 Msa0610190:CDS 50.0%
ACCACGGTTGCTATCAATGG+TGG - chr4_2:57902758-57902777 None:intergenic 50.0%
CACACCACGGTTGCTATCAA+TGG - chr4_2:57902761-57902780 None:intergenic 50.0%
! CATTGATAGCAACCGTGGTG+TGG + chr4_2:57902759-57902778 Msa0610190:CDS 50.0%
TTCGGATCATTCCCATGGTC+AGG + chr4_2:57903090-57903109 Msa0610190:CDS 50.0%
AACAGCAGAACGGCTGCTAA+AGG - chr4_2:57903309-57903328 None:intergenic 50.0%
AAGGCTGTGGATGGATCATC+AGG - chr4_2:57903339-57903358 None:intergenic 50.0%
TGCTACATCCTGGAATGCTC+CGG + chr4_2:57903392-57903411 Msa0610190:CDS 50.0%
ATAGCTGTCCGAGACTTCTC+AGG - chr4_2:57903684-57903703 None:intergenic 50.0%
AAATGCAGCATCACTCGCCA+AGG + chr4_2:57903845-57903864 Msa0610190:CDS 50.0%
CTCTCGGGTATGTGCAGTAA+AGG - chr4_2:57903926-57903945 None:intergenic 50.0%
TTGCTCGATCTCTGTCTCTC+GGG - chr4_2:57903941-57903960 None:intergenic 50.0%
CTTGCTCGATCTCTGTCTCT+CGG - chr4_2:57903942-57903961 None:intergenic 50.0%
GCTGATGAGTCATTGCTGCC+AGG + chr4_2:57902128-57902147 Msa0610190:CDS 55.0%
GTGAGGGAACCTAACGCAGT+TGG - chr4_2:57902191-57902210 None:intergenic 55.0%
ATGTGCACGATTGTGTCGCG+TGG - chr4_2:57902267-57902286 None:intergenic 55.0%
AACTGTCCCCATGGACAGCT+GGG - chr4_2:57902493-57902512 None:intergenic 55.0%
TAACTGTCCCCATGGACAGC+TGG - chr4_2:57902494-57902513 None:intergenic 55.0%
AGCAACCGTGGTGTGGCATT+TGG + chr4_2:57902766-57902785 Msa0610190:CDS 55.0%
GCAACCGTGGTGTGGCATTT+GGG + chr4_2:57902767-57902786 Msa0610190:CDS 55.0%
CCATGCATGAAGGCTGTGGA+TGG - chr4_2:57903348-57903367 None:intergenic 55.0%
CCATCCACAGCCTTCATGCA+TGG + chr4_2:57903345-57903364 Msa0610190:CDS 55.0%
CAGACCATGCATGAAGGCTG+TGG - chr4_2:57903352-57903371 None:intergenic 55.0%
CACAGCCTTCATGCATGGTC+TGG + chr4_2:57903350-57903369 Msa0610190:CDS 55.0%
! GTTAGTTGCCGGAGCATTCC+AGG - chr4_2:57903403-57903422 None:intergenic 55.0%
GCTGATGAGTCATTGCTGCC+AGG + chr4_2:57902128-57902147 Msa0610190:CDS 55.0%
GTGAGGGAACCTAACGCAGT+TGG - chr4_2:57902191-57902210 None:intergenic 55.0%
ATGTGCACGATTGTGTCGCG+TGG - chr4_2:57902267-57902286 None:intergenic 55.0%
AACTGTCCCCATGGACAGCT+GGG - chr4_2:57902493-57902512 None:intergenic 55.0%
TAACTGTCCCCATGGACAGC+TGG - chr4_2:57902494-57902513 None:intergenic 55.0%
AGCAACCGTGGTGTGGCATT+TGG + chr4_2:57902766-57902785 Msa0610190:CDS 55.0%
GCAACCGTGGTGTGGCATTT+GGG + chr4_2:57902767-57902786 Msa0610190:CDS 55.0%
CCATGCATGAAGGCTGTGGA+TGG - chr4_2:57903348-57903367 None:intergenic 55.0%
CCATCCACAGCCTTCATGCA+TGG + chr4_2:57903345-57903364 Msa0610190:CDS 55.0%
CAGACCATGCATGAAGGCTG+TGG - chr4_2:57903352-57903371 None:intergenic 55.0%
CACAGCCTTCATGCATGGTC+TGG + chr4_2:57903350-57903369 Msa0610190:CDS 55.0%
! GTTAGTTGCCGGAGCATTCC+AGG - chr4_2:57903403-57903422 None:intergenic 55.0%
TGGCGAGGTAAGCAGCCAGA+GGG - chr4_2:57902247-57902266 None:intergenic 60.0%
GGAGATGGCGACGAGGAATG+TGG - chr4_2:57902324-57902343 None:intergenic 60.0%
ACCGTGGTGTGGCATTTGGG+TGG + chr4_2:57902770-57902789 Msa0610190:CDS 60.0%
GCCACCCAAATGCCACACCA+CGG - chr4_2:57902774-57902793 None:intergenic 60.0%
TGGCGAGGTAAGCAGCCAGA+GGG - chr4_2:57902247-57902266 None:intergenic 60.0%
GGAGATGGCGACGAGGAATG+TGG - chr4_2:57902324-57902343 None:intergenic 60.0%
ACCGTGGTGTGGCATTTGGG+TGG + chr4_2:57902770-57902789 Msa0610190:CDS 60.0%
GCCACCCAAATGCCACACCA+CGG - chr4_2:57902774-57902793 None:intergenic 60.0%
GTGGCGAGGTAAGCAGCCAG+AGG - chr4_2:57902248-57902267 None:intergenic 65.0%
CACGATTGTGTCGCGTGGCG+AGG - chr4_2:57902262-57902281 None:intergenic 65.0%
AGGTGGAGGAGATGGCGACG+AGG - chr4_2:57902331-57902350 None:intergenic 65.0%
CCATGGACAGCTGGGACAGG+GGG - chr4_2:57902485-57902504 None:intergenic 65.0%
CCCATGGACAGCTGGGACAG+GGG - chr4_2:57902486-57902505 None:intergenic 65.0%
CCCCTGTCCCAGCTGTCCAT+GGG + chr4_2:57902483-57902502 Msa0610190:intron 65.0%
CCCCATGGACAGCTGGGACA+GGG - chr4_2:57902487-57902506 None:intergenic 65.0%
CCCTGTCCCAGCTGTCCATG+GGG + chr4_2:57902484-57902503 Msa0610190:intron 65.0%
TCCCCATGGACAGCTGGGAC+AGG - chr4_2:57902488-57902507 None:intergenic 65.0%
GTGGCGAGGTAAGCAGCCAG+AGG - chr4_2:57902248-57902267 None:intergenic 65.0%
CACGATTGTGTCGCGTGGCG+AGG - chr4_2:57902262-57902281 None:intergenic 65.0%
AGGTGGAGGAGATGGCGACG+AGG - chr4_2:57902331-57902350 None:intergenic 65.0%
CCATGGACAGCTGGGACAGG+GGG - chr4_2:57902485-57902504 None:intergenic 65.0%
CCCATGGACAGCTGGGACAG+GGG - chr4_2:57902486-57902505 None:intergenic 65.0%
CCCCTGTCCCAGCTGTCCAT+GGG + chr4_2:57902483-57902502 Msa0610190:intron 65.0%
CCCCATGGACAGCTGGGACA+GGG - chr4_2:57902487-57902506 None:intergenic 65.0%
CCCTGTCCCAGCTGTCCATG+GGG + chr4_2:57902484-57902503 Msa0610190:intron 65.0%
TCCCCATGGACAGCTGGGAC+AGG - chr4_2:57902488-57902507 None:intergenic 65.0%
CCCCCTGTCCCAGCTGTCCA+TGG + chr4_2:57902482-57902501 Msa0610190:intron 70.0%
CCCCCTGTCCCAGCTGTCCA+TGG + chr4_2:57902482-57902501 Msa0610190:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 57902071 57904169 57902071 ID=Msa0610190;Name=Msa0610190
chr4_2 mRNA 57902071 57904169 57902071 ID=Msa0610190-mRNA-1;Parent=Msa0610190;Name=Msa0610190-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|514
chr4_2 exon 57902071 57902358 57902071 ID=Msa0610190-mRNA-1:exon:15073;Parent=Msa0610190-mRNA-1
chr4_2 exon 57902679 57903424 57902679 ID=Msa0610190-mRNA-1:exon:15074;Parent=Msa0610190-mRNA-1
chr4_2 exon 57903659 57904169 57903659 ID=Msa0610190-mRNA-1:exon:15075;Parent=Msa0610190-mRNA-1
chr4_2 CDS 57902071 57902358 57902071 ID=Msa0610190-mRNA-1:cds;Parent=Msa0610190-mRNA-1
chr4_2 CDS 57902679 57903424 57902679 ID=Msa0610190-mRNA-1:cds;Parent=Msa0610190-mRNA-1
chr4_2 CDS 57903659 57904169 57903659 ID=Msa0610190-mRNA-1:cds;Parent=Msa0610190-mRNA-1
Gene Sequence

>Msa0610190

ATGAAGGCAGAGACGTTGACATTGGTGCTGGTGAATCTTGCAAGTATTATGCAGAGAGCTGATGAGTCATTGCTGCCAGGAGTATACAAAGAAGTTGGTGCTGAACTTAACGCTGATCCAACTGCGTTAGGTTCCCTCACTCTTTTCCGATCCCTTGTTCAATCATTCTGTTACCCTCTGGCTGCTTACCTCGCCACGCGACACAATCGTGCACATGTTATTGCTCTAGGTGCTTTTCTTTGGGCTGCTGCCACATTCCTCGTCGCCATCTCCTCCACCTTCTTACAGGTGGCATTTTCAAGAGGTTTAAATGGCATTGGACTAGCCATTGTAATTCCAGCAATTCAGTCTCTAGTTGCTGACTCCACCATTGATAGCAACCGTGGTGTGGCATTTGGGTGGCTACAACTAACAGGAAACCTTGGAAGTATTATTGGTGGTCTTTTCTCAGTACTACTAGCCTCAACATCAATCTTTGGTATATCTGGTTGGAGAATAGCTTTTCATCTGGTTGCATTGATTAGTGTTATAGTTGGTATATTGGTACGCATCTACGCTAATGATCCACACTTTCCAAAAAATGACAACAGTTATCAAACTTCAAACCAGTCCTTTTATTCTGAAATAAAAGATTTAATAAAAGAAGCAAAAGCGGTTATAAAAATTCCATCATTTCAAATAATTGTGGCTCAGGGAGTTTTCGGATCATTCCCATGGTCAGGTTTGTCATTTGCCACTCTTTGGTTAGAACTAATAGGCTTCTCACATGGTACAACAGCAATTCTTTGGACCTTCTTTATAGTTTCTGCTTCATTTGGGTCTTTGTTTGGAGGATGGTTCGGAGATTACTTATCCCTAAGGTTACCAAACACTGGGAGAATAATGTTATCACAAATAAGTGCCGGTTCAGCTGTTCCTTTAGCAGCCGTTCTGCTGTTAATGCTGCCTGATGATCCATCCACAGCCTTCATGCATGGTCTGGTTTTAGTTATCATGGGATTTGCTACATCCTGGAATGCTCCGGCAACTAACAATCCAATATTTGCAGAAATAGTTCCTGAGAAGTCTCGGACAGCTATATATGCTTTGGATCAATCTTTCGAGTCTATATTGCAATCATTTGCTCCTCCTGTTGTTGGATTATTGGCACAAAATGTTTTTGGCTATAGACCAGTTCCAAAAGGATCTTCTGATTCCGTTGAAATCGAAACAGATAGGGAAAATGCAGCATCACTCGCCAAGGCGATCTGTATTGTTTTTGTAATTCCTTTGACACTTTGTGTCTGCATCTACTCATTCCTTTACTGCACATACCCGAGAGACAGAGATCGAGCAAGAATGGTTGCATTAGAGGAATCAGAAATGCAGCAACTAGAGGTGGAAGATTGCACAAGAGAAAAAGAAGAATATTGTGAAATTCATGTTTTAGAACCAAATGAACTGAATGGTAAAGAAATTAGCAAGATTGATGATGATTTAGATTATCCAAGGGAAGAGAACATAGAGTTAGATGATAATGACGAGAAAGTTTTGTTGTCCCGGTAG

Protein sequence

>Msa0610190

MKAETLTLVLVNLASIMQRADESLLPGVYKEVGAELNADPTALGSLTLFRSLVQSFCYPLAAYLATRHNRAHVIALGAFLWAAATFLVAISSTFLQVAFSRGLNGIGLAIVIPAIQSLVADSTIDSNRGVAFGWLQLTGNLGSIIGGLFSVLLASTSIFGISGWRIAFHLVALISVIVGILVRIYANDPHFPKNDNSYQTSNQSFYSEIKDLIKEAKAVIKIPSFQIIVAQGVFGSFPWSGLSFATLWLELIGFSHGTTAILWTFFIVSASFGSLFGGWFGDYLSLRLPNTGRIMLSQISAGSAVPLAAVLLLMLPDDPSTAFMHGLVLVIMGFATSWNAPATNNPIFAEIVPEKSRTAIYALDQSFESILQSFAPPVVGLLAQNVFGYRPVPKGSSDSVEIETDRENAASLAKAICIVFVIPLTLCVCIYSFLYCTYPRDRDRARMVALEESEMQQLEVEDCTREKEEYCEIHVLEPNELNGKEISKIDDDLDYPREENIELDDNDEKVLLSR*