Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0631900 | XP_024638897.1 | 97.619 | 294 | 4 | 2 | 1 | 291 | 1 | 294 | 0.0 | 582 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0631900 | sp|Q93VV0|ZDHC6_ARATH | 68.683 | 281 | 86 | 1 | 13 | 291 | 5 | 285 | 2.30e-137 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0631900 | A0A072UT43 | 97.619 | 294 | 4 | 2 | 1 | 291 | 1 | 294 | 0.0 | 582 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0631900 | -0.802753 | 4.831401e-49 | -8.615850e-47 |
| Msa0014970 | Msa0631900 | -0.802352 | 5.842769e-49 | -8.615850e-47 |
| Msa0016380 | Msa0631900 | -0.805052 | 1.607627e-49 | -8.615850e-47 |
| Msa0027030 | Msa0631900 | -0.803310 | 3.706315e-49 | -8.615850e-47 |
| Msa0034050 | Msa0631900 | -0.803949 | 2.730470e-49 | -8.615850e-47 |
| Msa0034100 | Msa0631900 | -0.841075 | 5.918509e-58 | -8.615850e-47 |
| Msa0041780 | Msa0631900 | -0.804165 | 2.462891e-49 | -8.615850e-47 |
| Msa0042240 | Msa0631900 | -0.809001 | 2.347817e-50 | -8.615850e-47 |
| Msa0056230 | Msa0631900 | -0.805746 | 1.150080e-49 | -8.615850e-47 |
| Msa0074220 | Msa0631900 | -0.800035 | 1.740912e-48 | -8.615850e-47 |
| Msa0078160 | Msa0631900 | -0.802911 | 4.479964e-49 | -8.615850e-47 |
| Msa0078170 | Msa0631900 | -0.800893 | 1.163910e-48 | -8.615850e-47 |
| Msa0081290 | Msa0631900 | -0.803857 | 2.853267e-49 | -8.615850e-47 |
| Msa0081790 | Msa0631900 | -0.818898 | 1.541630e-52 | -8.615850e-47 |
| Msa0086620 | Msa0631900 | -0.803251 | 3.810414e-49 | -8.615850e-47 |
| Msa0089470 | Msa0631900 | -0.818626 | 1.777255e-52 | -8.615850e-47 |
| Msa0094900 | Msa0631900 | -0.808520 | 2.974842e-50 | -8.615850e-47 |
| Msa0108500 | Msa0631900 | -0.802977 | 4.341821e-49 | -8.615850e-47 |
| Msa0110240 | Msa0631900 | 0.801052 | 1.079844e-48 | -8.615850e-47 |
| Msa0608940 | Msa0631900 | -0.801823 | 7.506369e-49 | -8.615850e-47 |
| Msa0612880 | Msa0631900 | -0.801494 | 8.768089e-49 | -8.615850e-47 |
| Msa0619690 | Msa0631900 | -0.808430 | 3.108807e-50 | -8.615850e-47 |
| Msa0631900 | Msa0634900 | -0.801979 | 6.971865e-49 | -8.615850e-47 |
| Msa0631900 | Msa0659020 | -0.817249 | 3.636915e-52 | -8.615850e-47 |
| Msa0631900 | Msa0663580 | -0.807638 | 4.583718e-50 | -8.615850e-47 |
| Msa0631900 | Msa0670740 | 0.905862 | 2.740179e-80 | -8.615850e-47 |
| Msa0631900 | Msa0673940 | 0.816807 | 4.570056e-52 | -8.615850e-47 |
| Msa0631900 | Msa0674680 | -0.802153 | 6.421142e-49 | -8.615850e-47 |
| Msa0631900 | Msa0685390 | -0.807784 | 4.267556e-50 | -8.615850e-47 |
| Msa0631900 | Msa0685610 | 0.829606 | 4.686779e-55 | -8.615850e-47 |
| Msa0631900 | Msa0688880 | -0.819343 | 1.220456e-52 | -8.615850e-47 |
| Msa0631900 | Msa0691740 | -0.808294 | 3.323552e-50 | -8.615850e-47 |
| Msa0631900 | Msa0698110 | 0.800737 | 1.252432e-48 | -8.615850e-47 |
| Msa0631900 | Msa0702020 | -0.806055 | 9.905177e-50 | -8.615850e-47 |
| Msa0631900 | Msa0702360 | -0.821402 | 4.115975e-53 | -8.615850e-47 |
| Msa0631900 | Msa0702560 | -0.820349 | 7.187945e-53 | -8.615850e-47 |
| Msa0631900 | Msa0714060 | -0.808191 | 3.496329e-50 | -8.615850e-47 |
| Msa0631900 | Msa0714200 | -0.805327 | 1.408163e-49 | -8.615850e-47 |
| Msa0631900 | Msa0730250 | -0.807826 | 4.180473e-50 | -8.615850e-47 |
| Msa0631900 | Msa0733240 | -0.812675 | 3.763298e-51 | -8.615850e-47 |
| Msa0631900 | Msa0756440 | -0.810832 | 9.473610e-51 | -8.615850e-47 |
| Msa0631900 | Msa0756670 | -0.800799 | 1.216352e-48 | -8.615850e-47 |
| Msa0631900 | Msa0774360 | -0.824109 | 9.643014e-54 | -8.615850e-47 |
| Msa0631900 | Msa0797980 | -0.801251 | 9.832033e-49 | -8.615850e-47 |
| Msa0631900 | Msa0812020 | -0.828029 | 1.128300e-54 | -8.615850e-47 |
| Msa0631900 | Msa0834200 | -0.813011 | 3.176264e-51 | -8.615850e-47 |
| Msa0631900 | Msa0835550 | -0.809770 | 1.605299e-50 | -8.615850e-47 |
| Msa0631900 | Msa0849290 | -0.804243 | 2.371799e-49 | -8.615850e-47 |
| Msa0631900 | Msa0852090 | -0.836088 | 1.148512e-56 | -8.615850e-47 |
| Msa0631900 | Msa0868040 | -0.807403 | 5.142785e-50 | -8.615850e-47 |
| Msa0631900 | Msa0871420 | 0.805533 | 1.274972e-49 | -8.615850e-47 |
| Msa0631900 | Msa0884840 | -0.806879 | 6.639468e-50 | -8.615850e-47 |
| Msa0631900 | Msa0902340 | 0.801131 | 1.040782e-48 | -8.615850e-47 |
| Msa0631900 | Msa0925630 | -0.804413 | 2.186620e-49 | -8.615850e-47 |
| Msa0631900 | Msa0936630 | 0.806193 | 9.263923e-50 | -8.615850e-47 |
| Msa0631900 | Msa0941150 | -0.801502 | 8.735767e-49 | -8.615850e-47 |
| Msa0631900 | Msa0967900 | -0.800895 | 1.162688e-48 | -8.615850e-47 |
| Msa0631900 | Msa0970100 | 0.809443 | 1.887585e-50 | -8.615850e-47 |
| Msa0631900 | Msa0984820 | -0.804816 | 1.801698e-49 | -8.615850e-47 |
| Msa0631900 | Msa1010470 | -0.804044 | 2.609594e-49 | -8.615850e-47 |
| Msa0631900 | Msa1026490 | 0.802967 | 4.363153e-49 | -8.615850e-47 |
| Msa0631900 | Msa1026710 | 0.819325 | 1.232613e-52 | -8.615850e-47 |
| Msa0631900 | Msa1031530 | -0.814384 | 1.583723e-51 | -8.615850e-47 |
| Msa0631900 | Msa1033460 | -0.807894 | 4.044667e-50 | -8.615850e-47 |
| Msa0631900 | Msa1036020 | 0.807263 | 5.505963e-50 | -8.615850e-47 |
| Msa0631900 | Msa1038040 | -0.802423 | 5.649225e-49 | -8.615850e-47 |
| Msa0631900 | Msa1070630 | -0.807664 | 4.525351e-50 | -8.615850e-47 |
| Msa0631900 | Msa1072640 | -0.802986 | 4.323158e-49 | -8.615850e-47 |
| Msa0631900 | Msa1073140 | -0.807089 | 5.992981e-50 | -8.615850e-47 |
| Msa0631900 | Msa1078590 | -0.800657 | 1.300467e-48 | -8.615850e-47 |
| Msa0631900 | Msa1078600 | -0.808751 | 2.654657e-50 | -8.615850e-47 |
| Msa0631900 | Msa1078760 | -0.801124 | 1.043921e-48 | -8.615850e-47 |
| Msa0631900 | Msa1078770 | -0.803209 | 3.887346e-49 | -8.615850e-47 |
| Msa0631900 | Msa1085560 | 0.800433 | 1.444620e-48 | -8.615850e-47 |
| Msa0631900 | Msa1093190 | -0.822246 | 2.624413e-53 | -8.615850e-47 |
| Msa0631900 | Msa1101610 | -0.803932 | 2.753609e-49 | -8.615850e-47 |
| Msa0631900 | Msa1111650 | 0.808925 | 2.437123e-50 | -8.615850e-47 |
| Msa0631900 | Msa1122550 | 0.804704 | 1.901468e-49 | -8.615850e-47 |
| Msa0631900 | Msa1136770 | -0.807055 | 6.093322e-50 | -8.615850e-47 |
| Msa0631900 | Msa1146980 | 0.806518 | 7.910644e-50 | -8.615850e-47 |
| Msa0631900 | Msa1158450 | -0.800012 | 1.759687e-48 | -8.615850e-47 |
| Msa0631900 | Msa1160470 | -0.807396 | 5.158623e-50 | -8.615850e-47 |
| Msa0631900 | Msa1163340 | 0.814623 | 1.402008e-51 | -8.615850e-47 |
| Msa0631900 | Msa1182400 | -0.808282 | 3.344162e-50 | -8.615850e-47 |
| Msa0631900 | Msa1182530 | -0.820985 | 5.133854e-53 | -8.615850e-47 |
| Msa0631900 | Msa1200360 | 0.808644 | 2.798238e-50 | -8.615850e-47 |
| Msa0631900 | Msa1202220 | -0.816646 | 4.968141e-52 | -8.615850e-47 |
| Msa0631900 | Msa1205270 | -0.815328 | 9.778530e-52 | -8.615850e-47 |
| Msa0631900 | Msa1224820 | -0.820676 | 6.046518e-53 | -8.615850e-47 |
| Msa0631900 | Msa1230190 | -0.805342 | 1.398104e-49 | -8.615850e-47 |
| Msa0631900 | Msa1240240 | -0.802255 | 6.118146e-49 | -8.615850e-47 |
| Msa0631900 | Msa1243630 | -0.802212 | 6.243570e-49 | -8.615850e-47 |
| Msa0631900 | Msa1244220 | -0.800052 | 1.726605e-48 | -8.615850e-47 |
| Msa0631900 | Msa1253270 | 0.821196 | 4.591009e-53 | -8.615850e-47 |
| Msa0631900 | Msa1253300 | 0.801604 | 8.325271e-49 | -8.615850e-47 |
| Msa0631900 | Msa1255030 | -0.822772 | 1.981138e-53 | -8.615850e-47 |
| Msa0631900 | Msa1266120 | -0.800073 | 1.710396e-48 | -8.615850e-47 |
| Msa0631900 | Msa1272770 | -0.812085 | 5.061840e-51 | -8.615850e-47 |
| Msa0631900 | Msa1286860 | -0.817145 | 3.837846e-52 | -8.615850e-47 |
| Msa0631900 | Msa1286950 | -0.848000 | 8.098908e-60 | -8.615850e-47 |
| Msa0631900 | Msa1288970 | -0.818361 | 2.040347e-52 | -8.615850e-47 |
| Msa0631900 | Msa1295210 | -0.818705 | 1.705410e-52 | -8.615850e-47 |
| Msa0631900 | Msa1295220 | -0.801654 | 8.130524e-49 | -8.615850e-47 |
| Msa0631900 | Msa1297220 | -0.822815 | 1.936174e-53 | -8.615850e-47 |
| Msa0631900 | Msa1319230 | -0.844205 | 8.731870e-59 | -8.615850e-47 |
| Msa0631900 | Msa1320660 | -0.835065 | 2.083928e-56 | -8.615850e-47 |
| Msa0631900 | Msa1323260 | -0.802578 | 5.250402e-49 | -8.615850e-47 |
| Msa0631900 | Msa1329360 | 0.805578 | 1.247833e-49 | -8.615850e-47 |
| Msa0631900 | Msa1343450 | -0.830725 | 2.497832e-55 | -8.615850e-47 |
| Msa0631900 | Msa1347610 | 0.804013 | 2.647794e-49 | -8.615850e-47 |
| Msa0631900 | Msa1352600 | -0.807762 | 4.315164e-50 | -8.615850e-47 |
| Msa0631900 | Msa1352630 | -0.819972 | 8.770613e-53 | -8.615850e-47 |
| Msa0631900 | Msa1370270 | -0.815506 | 8.928310e-52 | -8.615850e-47 |
| Msa0631900 | Msa1379940 | 0.819776 | 9.721547e-53 | -8.615850e-47 |
| Msa0631900 | Msa1388270 | -0.807812 | 4.210073e-50 | -8.615850e-47 |
| Msa0631900 | Msa1392570 | -0.827831 | 1.258915e-54 | -8.615850e-47 |
| Msa0631900 | Msa1398150 | -0.803348 | 3.638196e-49 | -8.615850e-47 |
| Msa0631900 | Msa1400240 | -0.801188 | 1.012812e-48 | -8.615850e-47 |
| Msa0631900 | Msa1400290 | -0.813204 | 2.881672e-51 | -8.615850e-47 |
| Msa0631900 | Msa1409060 | 0.806608 | 7.574278e-50 | -8.615850e-47 |
| Msa0631900 | Msa1412740 | -0.801744 | 7.793241e-49 | -8.615850e-47 |
| Msa0631900 | Msa1414000 | -0.810571 | 1.078846e-50 | -8.615850e-47 |
| Msa0631900 | Msa1427600 | -0.832090 | 1.152332e-55 | -8.615850e-47 |
| Msa0631900 | Msa1429810 | 0.801685 | 8.011326e-49 | -8.615850e-47 |
| Msa0631900 | Msa1432250 | -0.803816 | 2.910553e-49 | -8.615850e-47 |
| Msa0631900 | Msa1434700 | 0.801171 | 1.020941e-48 | -8.615850e-47 |
| Msa0631900 | Msa1442070 | -0.835587 | 1.538799e-56 | -8.615850e-47 |
| Msa0631900 | Msa1450630 | -0.815641 | 8.332251e-52 | -8.615850e-47 |
| Msa0631900 | Msa1450850 | -0.808588 | 2.877330e-50 | -8.615850e-47 |
| Msa0631900 | Msa1459630 | -0.809101 | 2.234517e-50 | -8.615850e-47 |
| Msa0128110 | Msa0631900 | -0.837305 | 5.623203e-57 | -8.615850e-47 |
| Msa0131090 | Msa0631900 | -0.809392 | 1.935522e-50 | -8.615850e-47 |
| Msa0132080 | Msa0631900 | -0.802127 | 6.502087e-49 | -8.615850e-47 |
| Msa0136180 | Msa0631900 | -0.826470 | 2.666281e-54 | -8.615850e-47 |
| Msa0140870 | Msa0631900 | -0.801958 | 7.042857e-49 | -8.615850e-47 |
| Msa0174590 | Msa0631900 | 0.802984 | 4.327455e-49 | -8.615850e-47 |
| Msa0178440 | Msa0631900 | -0.821803 | 3.324343e-53 | -8.615850e-47 |
| Msa0186380 | Msa0631900 | -0.810604 | 1.061242e-50 | -8.615850e-47 |
| Msa0194750 | Msa0631900 | -0.811578 | 6.528366e-51 | -8.615850e-47 |
| Msa0208040 | Msa0631900 | -0.800429 | 1.447147e-48 | -8.615850e-47 |
| Msa0208710 | Msa0631900 | -0.807321 | 5.352480e-50 | -8.615850e-47 |
| Msa0209370 | Msa0631900 | -0.815757 | 7.848912e-52 | -8.615850e-47 |
| Msa0219840 | Msa0631900 | 0.804261 | 2.352083e-49 | -8.615850e-47 |
| Msa0221460 | Msa0631900 | -0.825675 | 4.119399e-54 | -8.615850e-47 |
| Msa0227970 | Msa0631900 | -0.803688 | 3.094170e-49 | -8.615850e-47 |
| Msa0236690 | Msa0631900 | -0.803307 | 3.711063e-49 | -8.615850e-47 |
| Msa0371350 | Msa0631900 | -0.805135 | 1.544787e-49 | -8.615850e-47 |
| Msa0372100 | Msa0631900 | 0.804667 | 1.935143e-49 | -8.615850e-47 |
| Msa0372990 | Msa0631900 | -0.804697 | 1.907229e-49 | -8.615850e-47 |
| Msa0384150 | Msa0631900 | -0.807805 | 4.224334e-50 | -8.615850e-47 |
| Msa0385870 | Msa0631900 | -0.805736 | 1.155697e-49 | -8.615850e-47 |
| Msa0387740 | Msa0631900 | -0.803756 | 2.994109e-49 | -8.615850e-47 |
| Msa0428330 | Msa0631900 | -0.817041 | 4.049967e-52 | -8.615850e-47 |
| Msa0434820 | Msa0631900 | -0.818522 | 1.875597e-52 | -8.615850e-47 |
| Msa0438680 | Msa0631900 | -0.805673 | 1.191426e-49 | -8.615850e-47 |
| Msa0447830 | Msa0631900 | -0.807832 | 4.169242e-50 | -8.615850e-47 |
| Msa0478730 | Msa0631900 | -0.808857 | 2.519960e-50 | -8.615850e-47 |
| Msa0240590 | Msa0631900 | -0.800352 | 1.500438e-48 | -8.615850e-47 |
| Msa0244820 | Msa0631900 | -0.823793 | 1.143659e-53 | -8.615850e-47 |
| Msa0266140 | Msa0631900 | -0.817311 | 3.522473e-52 | -8.615850e-47 |
| Msa0267450 | Msa0631900 | -0.801243 | 9.872965e-49 | -8.615850e-47 |
| Msa0279810 | Msa0631900 | 0.800643 | 1.308700e-48 | -8.615850e-47 |
| Msa0300670 | Msa0631900 | -0.822482 | 2.313614e-53 | -8.615850e-47 |
| Msa0304060 | Msa0631900 | -0.819296 | 1.251488e-52 | -8.615850e-47 |
| Msa0304350 | Msa0631900 | -0.800547 | 1.369058e-48 | -8.615850e-47 |
| Msa0309490 | Msa0631900 | -0.813505 | 2.474327e-51 | -8.615850e-47 |
| Msa0337760 | Msa0631900 | -0.826912 | 2.091201e-54 | -8.615850e-47 |
| Msa0340830 | Msa0631900 | -0.801847 | 7.421688e-49 | -8.615850e-47 |
| Msa0340870 | Msa0631900 | -0.803749 | 3.004305e-49 | -8.615850e-47 |
| Msa0483090 | Msa0631900 | -0.819534 | 1.104484e-52 | -8.615850e-47 |
| Msa0521580 | Msa0631900 | 0.806498 | 7.988459e-50 | -8.615850e-47 |
| Msa0522810 | Msa0631900 | -0.819787 | 9.665448e-53 | -8.615850e-47 |
| Msa0523400 | Msa0631900 | -0.810923 | 9.054955e-51 | -8.615850e-47 |
| Msa0526150 | Msa0631900 | 0.802941 | 4.417564e-49 | -8.615850e-47 |
| Msa0541880 | Msa0631900 | 0.813315 | 2.724286e-51 | -8.615850e-47 |
| Msa0541940 | Msa0631900 | 0.817878 | 2.623507e-52 | -8.615850e-47 |
| Msa0566090 | Msa0631900 | -0.800764 | 1.236636e-48 | -8.615850e-47 |
| Msa0568460 | Msa0631900 | -0.807804 | 4.225674e-50 | -8.615850e-47 |
| Msa0572360 | Msa0631900 | 0.805371 | 1.378721e-49 | -8.615850e-47 |
| Msa0585720 | Msa0631900 | -0.803270 | 3.776253e-49 | -8.615850e-47 |
| Msa0591890 | Msa0631900 | 0.911460 | 5.930202e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0631900 | MtrunA17_Chr4g0009911 | 97.619 | 294 | 4 | 2 | 1 | 291 | 1 | 294 | 0.0 | 582 |
| Msa0631900 | MtrunA17_Chr1g0199411 | 48.519 | 270 | 128 | 5 | 17 | 282 | 11 | 273 | 8.25e-85 | 255 |
| Msa0631900 | MtrunA17_Chr7g0276121 | 32.273 | 220 | 116 | 7 | 70 | 270 | 80 | 285 | 1.71e-28 | 111 |
| Msa0631900 | MtrunA17_Chr4g0011001 | 32.083 | 240 | 139 | 6 | 44 | 270 | 54 | 282 | 3.05e-27 | 107 |
| Msa0631900 | MtrunA17_Chr1g0201631 | 31.313 | 198 | 110 | 6 | 51 | 225 | 67 | 261 | 3.59e-22 | 95.5 |
| Msa0631900 | MtrunA17_Chr7g0255151 | 30.081 | 246 | 120 | 10 | 45 | 260 | 84 | 307 | 1.33e-21 | 94.0 |
| Msa0631900 | MtrunA17_Chr6g0464751 | 31.343 | 201 | 108 | 7 | 51 | 225 | 67 | 263 | 2.11e-20 | 90.5 |
| Msa0631900 | MtrunA17_Chr6g0462021 | 29.167 | 192 | 107 | 5 | 76 | 256 | 123 | 296 | 4.03e-19 | 87.0 |
| Msa0631900 | MtrunA17_Chr3g0131931 | 27.189 | 217 | 111 | 6 | 73 | 260 | 103 | 301 | 1.19e-17 | 82.4 |
| Msa0631900 | MtrunA17_Chr7g0255161 | 27.197 | 239 | 126 | 9 | 75 | 291 | 67 | 279 | 1.29e-16 | 79.0 |
| Msa0631900 | MtrunA17_Chr5g0406311 | 29.189 | 185 | 111 | 5 | 105 | 283 | 170 | 340 | 6.66e-16 | 77.0 |
| Msa0631900 | MtrunA17_Chr1g0163561 | 32.692 | 156 | 80 | 3 | 12 | 167 | 85 | 215 | 7.90e-16 | 76.6 |
| Msa0631900 | MtrunA17_Chr7g0273371 | 27.500 | 240 | 137 | 7 | 22 | 235 | 86 | 314 | 1.12e-15 | 76.6 |
| Msa0631900 | MtrunA17_Chr4g0037991 | 46.479 | 71 | 35 | 1 | 100 | 167 | 163 | 233 | 5.12e-15 | 74.3 |
| Msa0631900 | MtrunA17_Chr4g0064931 | 26.482 | 253 | 156 | 8 | 22 | 256 | 293 | 533 | 7.43e-15 | 74.7 |
| Msa0631900 | MtrunA17_Chr4g0038841 | 30.065 | 153 | 95 | 4 | 99 | 239 | 177 | 329 | 6.67e-14 | 72.0 |
| Msa0631900 | MtrunA17_Chr7g0251761 | 31.847 | 157 | 92 | 5 | 104 | 256 | 151 | 296 | 2.53e-13 | 69.7 |
| Msa0631900 | MtrunA17_Chr4g0049351 | 46.154 | 65 | 35 | 0 | 103 | 167 | 362 | 426 | 3.50e-13 | 69.7 |
| Msa0631900 | MtrunA17_Chr1g0193941 | 28.025 | 157 | 97 | 3 | 84 | 228 | 141 | 293 | 5.10e-13 | 68.9 |
| Msa0631900 | MtrunA17_Chr4g0042821 | 29.670 | 182 | 109 | 6 | 104 | 266 | 180 | 361 | 1.30e-12 | 67.8 |
| Msa0631900 | MtrunA17_Chr1g0211231 | 27.602 | 221 | 124 | 8 | 44 | 256 | 333 | 525 | 4.13e-12 | 66.2 |
| Msa0631900 | MtrunA17_Chr1g0211241 | 26.772 | 254 | 163 | 7 | 12 | 256 | 371 | 610 | 2.91e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0631900 | AT3G09320.1 | 68.683 | 281 | 86 | 1 | 13 | 291 | 5 | 285 | 2.34e-138 | 392 |
| Msa0631900 | AT5G04270.1 | 51.969 | 254 | 114 | 3 | 16 | 267 | 7 | 254 | 1.97e-81 | 247 |
| Msa0631900 | AT4G22750.1 | 34.529 | 223 | 119 | 6 | 57 | 266 | 62 | 270 | 5.26e-31 | 118 |
| Msa0631900 | AT4G00840.1 | 29.930 | 284 | 166 | 9 | 22 | 283 | 17 | 289 | 1.07e-29 | 114 |
| Msa0631900 | AT3G60800.1 | 32.917 | 240 | 131 | 8 | 44 | 266 | 54 | 280 | 2.06e-28 | 111 |
| Msa0631900 | AT4G00840.2 | 42.593 | 108 | 57 | 3 | 44 | 146 | 47 | 154 | 1.90e-22 | 93.2 |
| Msa0631900 | AT5G50020.3 | 33.166 | 199 | 105 | 7 | 51 | 225 | 66 | 260 | 3.80e-22 | 95.9 |
| Msa0631900 | AT5G50020.2 | 33.166 | 199 | 105 | 7 | 51 | 225 | 96 | 290 | 4.96e-22 | 95.5 |
| Msa0631900 | AT3G56930.1 | 31.579 | 190 | 102 | 6 | 75 | 256 | 123 | 292 | 1.50e-21 | 94.4 |
| Msa0631900 | AT4G24630.1 | 29.046 | 241 | 134 | 8 | 12 | 222 | 24 | 257 | 5.21e-20 | 89.7 |
| Msa0631900 | AT5G41060.2 | 25.000 | 264 | 152 | 10 | 20 | 256 | 34 | 278 | 5.35e-19 | 86.7 |
| Msa0631900 | AT5G41060.1 | 25.000 | 264 | 152 | 10 | 20 | 256 | 49 | 293 | 6.05e-19 | 86.7 |
| Msa0631900 | AT5G41060.3 | 27.468 | 233 | 123 | 10 | 51 | 256 | 13 | 226 | 7.07e-19 | 85.9 |
| Msa0631900 | AT5G41060.4 | 27.468 | 233 | 123 | 10 | 51 | 256 | 13 | 226 | 7.07e-19 | 85.9 |
| Msa0631900 | AT5G05070.1 | 26.394 | 269 | 153 | 9 | 20 | 260 | 66 | 317 | 1.38e-18 | 85.5 |
| Msa0631900 | AT5G50020.1 | 32.161 | 199 | 100 | 8 | 51 | 225 | 66 | 253 | 9.07e-18 | 83.2 |
| Msa0631900 | AT3G48760.1 | 28.111 | 217 | 109 | 9 | 73 | 260 | 110 | 308 | 2.97e-17 | 82.0 |
| Msa0631900 | AT2G40990.1 | 29.032 | 186 | 101 | 7 | 75 | 252 | 137 | 299 | 6.47e-17 | 80.9 |
| Msa0631900 | AT3G26935.1 | 30.256 | 195 | 109 | 7 | 54 | 225 | 83 | 273 | 7.95e-17 | 80.5 |
| Msa0631900 | AT3G56920.1 | 27.984 | 243 | 130 | 9 | 45 | 260 | 64 | 288 | 1.31e-16 | 79.3 |
| Msa0631900 | AT3G51390.2 | 28.302 | 212 | 139 | 4 | 74 | 285 | 133 | 331 | 7.25e-16 | 77.0 |
| Msa0631900 | AT3G51390.1 | 29.282 | 181 | 120 | 3 | 105 | 285 | 164 | 336 | 7.76e-16 | 77.0 |
| Msa0631900 | AT3G04970.3 | 30.918 | 207 | 105 | 8 | 57 | 235 | 31 | 227 | 1.96e-15 | 75.5 |
| Msa0631900 | AT2G14255.1 | 28.405 | 257 | 157 | 8 | 16 | 256 | 275 | 520 | 2.16e-15 | 76.6 |
| Msa0631900 | AT3G18620.1 | 36.538 | 104 | 55 | 2 | 104 | 196 | 149 | 252 | 2.21e-15 | 75.9 |
| Msa0631900 | AT3G04970.1 | 30.918 | 207 | 105 | 8 | 57 | 235 | 118 | 314 | 5.20e-15 | 75.1 |
| Msa0631900 | AT3G56930.2 | 32.000 | 150 | 63 | 4 | 75 | 224 | 123 | 233 | 1.92e-14 | 73.6 |
| Msa0631900 | AT3G04970.2 | 31.383 | 188 | 101 | 7 | 58 | 222 | 119 | 301 | 2.50e-14 | 72.4 |
| Msa0631900 | AT1G69420.1 | 31.579 | 152 | 92 | 3 | 104 | 243 | 164 | 315 | 4.27e-13 | 69.7 |
| Msa0631900 | AT1G69420.2 | 31.579 | 152 | 92 | 3 | 104 | 243 | 164 | 315 | 4.27e-13 | 69.7 |
| Msa0631900 | AT5G20350.1 | 30.846 | 201 | 116 | 7 | 73 | 256 | 334 | 528 | 5.89e-13 | 69.3 |
| Msa0631900 | AT3G22180.1 | 25.000 | 192 | 121 | 5 | 63 | 242 | 143 | 323 | 2.63e-11 | 64.3 |
| Msa0631900 | AT4G15080.2 | 29.586 | 169 | 96 | 5 | 93 | 242 | 161 | 325 | 4.03e-11 | 63.9 |
| Msa0631900 | AT4G15080.1 | 29.586 | 169 | 96 | 5 | 93 | 242 | 161 | 325 | 4.03e-11 | 63.9 |
Find 84 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCAGTCTTGTTAGGTTT+TGG | 0.177454 | 4_3:-15332763 | Msa0631900:three_prime_UTR |
| GGTTGTTTCTGGGCTCTTAC+TGG | 0.218961 | 4_3:-15334203 | Msa0631900:CDS |
| CGGCTTCGCGTTCTCGTTTC+CGG | 0.221292 | 4_3:-15337343 | Msa0631900:CDS |
| CACAGCCAGCTAAGGATATT+TGG | 0.270678 | 4_3:+15333144 | None:intergenic |
| GCTTATAGTGAGAGCACTTT+TGG | 0.276496 | 4_3:+15334819 | None:intergenic |
| ACACATAATGATATAGTTAA+AGG | 0.276995 | 4_3:+15334178 | None:intergenic |
| CCCCATCTTCCAGTCTTGTT+AGG | 0.286556 | 4_3:-15332769 | Msa0631900:three_prime_UTR |
| GATGAAATGACGACGGTTAC+CGG | 0.290148 | 4_3:+15337324 | None:intergenic |
| CTGCTTCGCTTTCTCGATCA+TGG | 0.338698 | 4_3:+15337380 | None:intergenic |
| GTCTTCATTGATAGATGGTT+TGG | 0.345555 | 4_3:-15337270 | Msa0631900:CDS |
| ACCTAAGTCCAGAACCTATA+TGG | 0.351878 | 4_3:+15333109 | None:intergenic |
| CCTAATCTATGTCTAACAAA+TGG | 0.360201 | 4_3:+15332808 | None:intergenic |
| TTGCGTTTGATTTCATGAAT+AGG | 0.366006 | 4_3:+15337102 | None:intergenic |
| GTAAGGATCACCATTGCATT+TGG | 0.377803 | 4_3:-15334669 | Msa0631900:intron |
| ACAACGGCGTTTATGATTCC+AGG | 0.389406 | 4_3:+15337234 | None:intergenic |
| TCTTCGTCTTCATTGATAGA+TGG | 0.393150 | 4_3:-15337275 | Msa0631900:CDS |
| CTCCCCGTGCACATCATTGC+CGG | 0.397317 | 4_3:-15334796 | Msa0631900:CDS |
| ACAGCAAGCCATATAGGTTC+TGG | 0.412789 | 4_3:-15333117 | Msa0631900:CDS |
| CCATTTGTTAGACATAGATT+AGG | 0.423448 | 4_3:-15332808 | Msa0631900:three_prime_UTR |
| AAGCAGCAACGCGGCGGCGG+CGG | 0.424579 | 4_3:-15337363 | Msa0631900:CDS |
| TCCCCGTGCACATCATTGCC+GGG | 0.424676 | 4_3:-15334795 | Msa0631900:CDS |
| TCATACGGGCCAAGGTCATA+TGG | 0.430628 | 4_3:+15333958 | None:intergenic |
| TGGGACCAAATATCCTTAGC+TGG | 0.447899 | 4_3:-15333149 | Msa0631900:CDS |
| ACATCAGGCGTATACGTAGA+AGG | 0.449279 | 4_3:+15337141 | None:intergenic |
| CGGTGCTTTGCAGTGGACTT+TGG | 0.450312 | 4_3:-15333031 | Msa0631900:intron |
| CTCGGGTATATGCAGCAAAC+AGG | 0.454202 | 4_3:+15332882 | None:intergenic |
| GGCTCATCAAGGTGCTGTAA+AGG | 0.454390 | 4_3:-15332680 | Msa0631900:three_prime_UTR |
| GCCATATAGGTTCTGGACTT+AGG | 0.455513 | 4_3:-15333110 | Msa0631900:CDS |
| GCGAAGCAGCAACGCGGCGG+CGG | 0.458234 | 4_3:-15337366 | Msa0631900:CDS |
| CACATAATGATATAGTTAAA+GGG | 0.461586 | 4_3:+15334179 | None:intergenic |
| CTAATCTATGTCTAACAAAT+GGG | 0.465517 | 4_3:+15332809 | None:intergenic |
| ATAGTATTATCTTCAACATC+AGG | 0.471334 | 4_3:+15337126 | None:intergenic |
| GCTCATCAAGGTGCTGTAAA+GGG | 0.476781 | 4_3:-15332679 | Msa0631900:three_prime_UTR |
| TGGCCAACAGCAAGCCATAT+AGG | 0.481073 | 4_3:-15333123 | Msa0631900:CDS |
| ATGAAGGAGTGAGAGCTTTG+TGG | 0.484159 | 4_3:-15334014 | Msa0631900:CDS |
| ACCTAACAAGACTGGAAGAT+GGG | 0.488347 | 4_3:+15332768 | None:intergenic |
| TAGTGAGATCATAGACGGTT+CGG | 0.494795 | 4_3:+15333085 | None:intergenic |
| TTGTGTTGGCAGTATTATGA+AGG | 0.498389 | 4_3:-15334030 | Msa0631900:intron |
| AGCTTTGTGGCTTCAAGAGA+AGG | 0.500113 | 4_3:-15334001 | Msa0631900:CDS |
| GTTGGTAGTCTAGCTTATGA+TGG | 0.500150 | 4_3:-15334354 | Msa0631900:CDS |
| GTGAGCAGGGTGGAGATTTG+AGG | 0.510803 | 4_3:-15334847 | Msa0631900:intron |
| CATCCAAAACCTAACAAGAC+TGG | 0.516170 | 4_3:+15332760 | None:intergenic |
| TATACATTACATAATTGCCT+CGG | 0.517321 | 4_3:+15332864 | None:intergenic |
| ACCCCGGCAATGATGTGCAC+GGG | 0.519740 | 4_3:+15334793 | None:intergenic |
| TCAAATTCTCATACGGGCCA+AGG | 0.521925 | 4_3:+15333950 | None:intergenic |
| ACATAACAATACCACGATAG+AGG | 0.522922 | 4_3:-15334125 | Msa0631900:intron |
| ACAGATGTCAAATTCTCATA+CGG | 0.523145 | 4_3:+15333943 | None:intergenic |
| ATACATTACATAATTGCCTC+GGG | 0.528147 | 4_3:+15332865 | None:intergenic |
| CTGTTGGCCACAGCCAGCTA+AGG | 0.531280 | 4_3:+15333136 | None:intergenic |
| TACGTAGAAGGAACCCGACC+CGG | 0.535528 | 4_3:+15337153 | None:intergenic |
| CAAATATCCTTAGCTGGCTG+TGG | 0.549591 | 4_3:-15333143 | Msa0631900:CDS |
| TGTGGCTTCAAGAGAAGGGT+GGG | 0.551105 | 4_3:-15333996 | Msa0631900:CDS |
| GATTGCCTGCATTTACTCCA+TGG | 0.552216 | 4_3:-15334584 | Msa0631900:intron |
| TTGGATGAAATGTGCTGTCA+AGG | 0.554984 | 4_3:-15332599 | Msa0631900:three_prime_UTR |
| AAAGCGAAGCAGCAACGCGG+CGG | 0.560120 | 4_3:-15337369 | Msa0631900:CDS |
| AACCTAACAAGACTGGAAGA+TGG | 0.560773 | 4_3:+15332767 | None:intergenic |
| TATAAACATCCATATGACCT+TGG | 0.564631 | 4_3:-15333967 | Msa0631900:CDS |
| AGAAGGAACCCGACCCGGAT+CGG | 0.567706 | 4_3:+15337158 | None:intergenic |
| ACCGTCTATGATCTCACTAA+AGG | 0.568962 | 4_3:-15333081 | Msa0631900:CDS |
| TAAAAGATGTGTTCTACGAA+TGG | 0.569266 | 4_3:-15334768 | Msa0631900:intron |
| TATTCATGAAATCAAACGCA+AGG | 0.586968 | 4_3:-15337100 | Msa0631900:intron |
| AACCCCGGCAATGATGTGCA+CGG | 0.588357 | 4_3:+15334792 | None:intergenic |
| GCTTTGTGGCTTCAAGAGAA+GGG | 0.589103 | 4_3:-15334000 | Msa0631900:CDS |
| GAACCTATATGGCTTGCTGT+TGG | 0.590025 | 4_3:+15333120 | None:intergenic |
| ACCTTTAGTGAGATCATAGA+CGG | 0.591266 | 4_3:+15333080 | None:intergenic |
| CCCCGTGCACATCATTGCCG+GGG | 0.592790 | 4_3:-15334794 | Msa0631900:CDS |
| CAGATGTCAAATTCTCATAC+GGG | 0.593509 | 4_3:+15333944 | None:intergenic |
| ATTTGGATAAATAACTGTGT+CGG | 0.599774 | 4_3:-15334652 | Msa0631900:CDS |
| AACACACATGAAAGCGATGA+CGG | 0.601760 | 4_3:+15337206 | None:intergenic |
| AGTTATTTATCCAAATGCAA+TGG | 0.610149 | 4_3:+15334659 | None:intergenic |
| TTGTGGCTTCAAGAGAAGGG+TGG | 0.610405 | 4_3:-15333997 | Msa0631900:CDS |
| ACATACCATGGAGTAAATGC+AGG | 0.612415 | 4_3:+15334579 | None:intergenic |
| CCCCGGCAATGATGTGCACG+GGG | 0.613681 | 4_3:+15334794 | None:intergenic |
| CCTAACAAGACTGGAAGATG+GGG | 0.614821 | 4_3:+15332769 | None:intergenic |
| CAAGACTGGAAGATGGGGAA+AGG | 0.623644 | 4_3:+15332774 | None:intergenic |
| TGGATGAAATGTGCTGTCAA+GGG | 0.628605 | 4_3:-15332598 | Msa0631900:three_prime_UTR |
| GCATGTCATAACCTCTATCG+TGG | 0.648544 | 4_3:+15334114 | None:intergenic |
| CTGTTTGCTGCATATACCCG+AGG | 0.662259 | 4_3:-15332881 | Msa0631900:three_prime_UTR |
| CGGCAATGATGTGCACGGGG+AGG | 0.663843 | 4_3:+15334797 | None:intergenic |
| ATCAATGAAGACGAAGACGG+TGG | 0.672230 | 4_3:+15337281 | None:intergenic |
| TCTATCAATGAAGACGAAGA+CGG | 0.675758 | 4_3:+15337278 | None:intergenic |
| AGCGATGACGGTGAAAACAA+CGG | 0.687250 | 4_3:+15337218 | None:intergenic |
| GAGAAAGCGAAGCAGCAACG+CGG | 0.693256 | 4_3:-15337372 | Msa0631900:CDS |
| AGCGATTGATGAAATGACGA+CGG | 0.729992 | 4_3:+15337317 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTCTTTTTTGTTTTAATT+TGG | - | chr4_3:15332781-15332800 | Msa0631900:three_prime_UTR | 15.0% |
| !! | ATAAATAAATATTGTGTACT+AGG | + | chr4_3:15334695-15334714 | None:intergenic | 15.0% |
| !!! | ATCTTTTTTGAATAAACATT+TGG | - | chr4_3:15336020-15336039 | Msa0631900:intron | 15.0% |
| !!! | TATTTTATGTATCTTGTAAT+TGG | - | chr4_3:15337170-15337189 | Msa0631900:CDS | 15.0% |
| !!! | TATTTTATGTATCTTGTAAT+TGG | - | chr4_3:15337170-15337189 | Msa0631900:CDS | 15.0% |
| !!! | TTTTGCATTGTTATGAATAT+TGG | - | chr4_3:15332725-15332744 | Msa0631900:three_prime_UTR | 20.0% |
| !! | TTTGCATTGTTATGAATATT+GGG | - | chr4_3:15332726-15332745 | Msa0631900:three_prime_UTR | 20.0% |
| !!! | TGGATTTTTCTTGTTTAAAT+TGG | - | chr4_3:15332801-15332820 | Msa0631900:three_prime_UTR | 20.0% |
| !!! | GGATTTTTCTTGTTTAAATT+GGG | - | chr4_3:15332802-15332821 | Msa0631900:three_prime_UTR | 20.0% |
| !!! | GATTTTTCTTGTTTAAATTG+GGG | - | chr4_3:15332803-15332822 | Msa0631900:three_prime_UTR | 20.0% |
| !! | AAAAAAAACATCATGATAGT+GGG | + | chr4_3:15333597-15333616 | None:intergenic | 20.0% |
| !! | AAAAAAAAACATCATGATAG+TGG | + | chr4_3:15333598-15333617 | None:intergenic | 20.0% |
| !! | TCTACAATATTAAGAATTAG+AGG | + | chr4_3:15333674-15333693 | None:intergenic | 20.0% |
| !! | GAAAATGATTTCAATATGTT+TGG | - | chr4_3:15334412-15334431 | Msa0631900:intron | 20.0% |
| !! | AACAAGTAAAATTAATCCAA+TGG | - | chr4_3:15334763-15334782 | Msa0631900:intron | 20.0% |
| !! | TAAAATAAACAAACATACCA+TGG | + | chr4_3:15335224-15335243 | None:intergenic | 20.0% |
| !! | AAATTGTTTACTTTACTGAA+GGG | + | chr4_3:15335536-15335555 | None:intergenic | 20.0% |
| !! | AAAATTGTTTACTTTACTGA+AGG | + | chr4_3:15335537-15335556 | None:intergenic | 20.0% |
| !! | CACATAATGATATAGTTAAA+GGG | + | chr4_3:15335612-15335631 | None:intergenic | 20.0% |
| !! | ACACATAATGATATAGTTAA+AGG | + | chr4_3:15335613-15335632 | None:intergenic | 20.0% |
| !!! | ATATCATTATGTGTTCTTTT+AGG | - | chr4_3:15335619-15335638 | Msa0631900:intron | 20.0% |
| !!! | TTTTTCTTTCTTCTTTCATT+TGG | - | chr4_3:15335994-15336013 | Msa0631900:intron | 20.0% |
| !! | TTTCTTTATGCAAACATAAA+TGG | + | chr4_3:15336273-15336292 | None:intergenic | 20.0% |
| !! | ATGTAAAAAAATTACATCGT+TGG | + | chr4_3:15336324-15336343 | None:intergenic | 20.0% |
| !!! | TCAATCATTAGAATTTTCAA+TGG | - | chr4_3:15336512-15336531 | Msa0631900:intron | 20.0% |
| !! | AAAAAAGAAGTTGAAGAAAA+GGG | + | chr4_3:15336541-15336560 | None:intergenic | 20.0% |
| !! | TAAAAAAGAAGTTGAAGAAA+AGG | + | chr4_3:15336542-15336561 | None:intergenic | 20.0% |
| !!! | TGTTTTGTTTATTTTTTTGC+AGG | - | chr4_3:15336613-15336632 | Msa0631900:intron | 20.0% |
| !!! | TTTATTTTTTTGCAGGTTTT+GGG | - | chr4_3:15336620-15336639 | Msa0631900:intron | 20.0% |
| !!! | TAACAAATGGGTTAAAAAAA+AGG | + | chr4_3:15336970-15336989 | None:intergenic | 20.0% |
| !! | CTAATGTACAAAAAGAAAAA+CGG | - | chr4_3:15337087-15337106 | Msa0631900:intron | 20.0% |
| !!! | TAAAATACAACTTTTCACAA+TGG | + | chr4_3:15337227-15337246 | None:intergenic | 20.0% |
| ! | ATAGTATTATCTTCAACATC+AGG | + | chr4_3:15332665-15332684 | None:intergenic | 25.0% |
| ! | AGATATGATTAATGATCCAT+TGG | - | chr4_3:15333026-15333045 | Msa0631900:intron | 25.0% |
| !!! | GATTTTTAACTAAAACACGT+CGG | + | chr4_3:15333082-15333101 | None:intergenic | 25.0% |
| !!! | TTTATGTGTGATTTGTTATG+TGG | - | chr4_3:15333209-15333228 | Msa0631900:intron | 25.0% |
| !!! | TTGTTTTTGTTGTTAATCTG+CGG | - | chr4_3:15333361-15333380 | Msa0631900:intron | 25.0% |
| ! | ATACAAACACAACAAAAAGA+AGG | + | chr4_3:15334083-15334102 | None:intergenic | 25.0% |
| !! | AAACTAGTTAGCATTTTCTT+AGG | + | chr4_3:15334195-15334214 | None:intergenic | 25.0% |
| ! | ACTAGTTAAGGAATCAAATA+TGG | - | chr4_3:15334224-15334243 | Msa0631900:intron | 25.0% |
| ! | TATGGTAAAACTTTCTTGAA+AGG | - | chr4_3:15334242-15334261 | Msa0631900:intron | 25.0% |
| ! | TCATAGGTAATTAGGAATAT+GGG | + | chr4_3:15334371-15334390 | None:intergenic | 25.0% |
| ! | TGAGCATTAATTAGGAATAT+GGG | + | chr4_3:15334535-15334554 | None:intergenic | 25.0% |
| ! | ATGAGCATTAATTAGGAATA+TGG | + | chr4_3:15334536-15334555 | None:intergenic | 25.0% |
| ! | ATACACAATCACATGTTTAT+GGG | + | chr4_3:15334867-15334886 | None:intergenic | 25.0% |
| !!! | TTCCAGTGATGTTTTTTTTT+TGG | - | chr4_3:15334914-15334933 | Msa0631900:intron | 25.0% |
| ! | TTCCAAAAAAAAAACATCAC+TGG | + | chr4_3:15334919-15334938 | None:intergenic | 25.0% |
| !!! | TCATCAATCAAGTTTTATCT+TGG | - | chr4_3:15335058-15335077 | Msa0631900:intron | 25.0% |
| !!! | CATCAATCAAGTTTTATCTT+GGG | - | chr4_3:15335059-15335078 | Msa0631900:intron | 25.0% |
| !!! | TGACAAAAAGTGTTGTTTAT+TGG | - | chr4_3:15335094-15335113 | Msa0631900:intron | 25.0% |
| ! | AGTTATTTATCCAAATGCAA+TGG | + | chr4_3:15335132-15335151 | None:intergenic | 25.0% |
| ! | ATTTGGATAAATAACTGTGT+CGG | - | chr4_3:15335136-15335155 | Msa0631900:intron | 25.0% |
| !! | CTTCCTTTTGATATTTTTCA+TGG | - | chr4_3:15335335-15335354 | Msa0631900:intron | 25.0% |
| ! | AGACCATGAAAAATATCAAA+AGG | + | chr4_3:15335341-15335360 | None:intergenic | 25.0% |
| !!! | CATGAAATAAACTTTTTTGC+AGG | - | chr4_3:15335564-15335583 | Msa0631900:intron | 25.0% |
| ! | TGATTTCGATTTACTCAATT+AGG | - | chr4_3:15335732-15335751 | Msa0631900:intron | 25.0% |
| ! | TTCATCATGATCATATCATA+TGG | - | chr4_3:15336043-15336062 | Msa0631900:intron | 25.0% |
| ! | CAATTATCACATCAATAAGA+TGG | + | chr4_3:15336161-15336180 | None:intergenic | 25.0% |
| ! | CTTATTGATGTGATAATTGA+CGG | - | chr4_3:15336162-15336181 | Msa0631900:intron | 25.0% |
| !!! | TTCTTTTGTATTCTGAAATC+AGG | - | chr4_3:15336188-15336207 | Msa0631900:intron | 25.0% |
| !!! | ATAGTAATGTGCTATTTGAT+TGG | + | chr4_3:15336353-15336372 | None:intergenic | 25.0% |
| !!! | GTTTATTTTTTTGCAGGTTT+TGG | - | chr4_3:15336619-15336638 | Msa0631900:intron | 25.0% |
| !!! | GTTAAAAAGGCATTGAATTT+GGG | + | chr4_3:15336847-15336866 | None:intergenic | 25.0% |
| ! | TATACATTACATAATTGCCT+CGG | + | chr4_3:15336927-15336946 | None:intergenic | 25.0% |
| ! | CTAATCTATGTCTAACAAAT+GGG | + | chr4_3:15336982-15337001 | None:intergenic | 25.0% |
| !! | CGTTTTTCTTTTTGTACATT+AGG | + | chr4_3:15337089-15337108 | None:intergenic | 25.0% |
| !! | TAAGATACAACTTTTCACAA+TGG | + | chr4_3:15337144-15337163 | None:intergenic | 25.0% |
| ! | TTGCGTTTGATTTCATGAAT+AGG | + | chr4_3:15332689-15332708 | None:intergenic | 30.0% |
| TATTCATGAAATCAAACGCA+AGG | - | chr4_3:15332688-15332707 | Msa0631900:three_prime_UTR | 30.0% | |
| CATTAAGCTCGTATAAAACT+TGG | + | chr4_3:15332857-15332876 | None:intergenic | 30.0% | |
| ACGTCGGAATTATTGAATAT+CGG | + | chr4_3:15333066-15333085 | None:intergenic | 30.0% | |
| !! | TTTGTTATGTGGTGAGTTTT+TGG | - | chr4_3:15333220-15333239 | Msa0631900:intron | 30.0% |
| ! | TGTTAATGTAGTCTTGATCA+AGG | - | chr4_3:15333431-15333450 | Msa0631900:intron | 30.0% |
| ! | TATACCGCAACAATATTTTG+GGG | + | chr4_3:15333799-15333818 | None:intergenic | 30.0% |
| ! | CTATACCGCAACAATATTTT+GGG | + | chr4_3:15333800-15333819 | None:intergenic | 30.0% |
| AAAATATTGTTGCGGTATAG+CGG | - | chr4_3:15333800-15333819 | Msa0631900:intron | 30.0% | |
| CGTATTGTTTCCTTAATCTT+CGG | + | chr4_3:15333846-15333865 | None:intergenic | 30.0% | |
| AACTGATCCAAAATAAACTG+AGG | - | chr4_3:15333903-15333922 | Msa0631900:intron | 30.0% | |
| TCCAAAATAAACTGAGGTAA+TGG | - | chr4_3:15333909-15333928 | Msa0631900:intron | 30.0% | |
| ! | TATAAGTTGAGGGCATATTT+GGG | - | chr4_3:15333933-15333952 | Msa0631900:intron | 30.0% |
| TTGTTTAGTAGTGACTGTAT+TGG | + | chr4_3:15333995-15334014 | None:intergenic | 30.0% | |
| GTTGTGTTTGTATTTGAGAA+AGG | - | chr4_3:15334090-15334109 | Msa0631900:intron | 30.0% | |
| ACTAGTGAAGGAAAACAAAA+AGG | + | chr4_3:15334323-15334342 | None:intergenic | 30.0% | |
| CTCATAGGTAATTAGGAATA+TGG | + | chr4_3:15334372-15334391 | None:intergenic | 30.0% | |
| AGTCATACTCATAGGTAATT+AGG | + | chr4_3:15334379-15334398 | None:intergenic | 30.0% | |
| AACACATTAGTCATACTCAT+AGG | + | chr4_3:15334387-15334406 | None:intergenic | 30.0% | |
| TATGAGTATGACTAATGTGT+TGG | - | chr4_3:15334386-15334405 | Msa0631900:intron | 30.0% | |
| !! | TTCAATATGTTTGGTTTGAC+TGG | - | chr4_3:15334421-15334440 | Msa0631900:intron | 30.0% |
| !! | TCAATATGTTTGGTTTGACT+GGG | - | chr4_3:15334422-15334441 | Msa0631900:intron | 30.0% |
| TGGAAAAATATCAGCTTCTA+GGG | + | chr4_3:15334468-15334487 | None:intergenic | 30.0% | |
| ! | TGATATTTTTCCACAGACTA+AGG | - | chr4_3:15334475-15334494 | Msa0631900:intron | 30.0% |
| AAAAGTAAAACCTTAGTCTG+TGG | + | chr4_3:15334488-15334507 | None:intergenic | 30.0% | |
| GAATATGGGCTTAATTAACT+AGG | + | chr4_3:15334521-15334540 | None:intergenic | 30.0% | |
| TGTTATATTAAGTGAGCCAT+TGG | + | chr4_3:15334782-15334801 | None:intergenic | 30.0% | |
| GATACACAATCACATGTTTA+TGG | + | chr4_3:15334868-15334887 | None:intergenic | 30.0% | |
| ! | CACTGGAAAGTTAATTTTCA+TGG | + | chr4_3:15334902-15334921 | None:intergenic | 30.0% |
| TAAAAGATGTGTTCTACGAA+TGG | - | chr4_3:15335020-15335039 | Msa0631900:intron | 30.0% | |
| !! | AAGTTTTATCTTGGGCTTTT+TGG | - | chr4_3:15335067-15335086 | Msa0631900:intron | 30.0% |
| !! | AGTGTTGTTTATTGGTTGTA+AGG | - | chr4_3:15335102-15335121 | Msa0631900:intron | 30.0% |
| AAGGAAGAGAAAACTAAATC+AGG | + | chr4_3:15335322-15335341 | None:intergenic | 30.0% | |
| ! | TCAATGTTGCTTAACTTTGT+AGG | - | chr4_3:15335403-15335422 | Msa0631900:intron | 30.0% |
| ! | ACTTTGTAGGTTTTACTTGT+TGG | - | chr4_3:15335416-15335435 | Msa0631900:intron | 30.0% |
| ATACACGATGAAGACAAAAA+TGG | - | chr4_3:15335458-15335477 | Msa0631900:intron | 30.0% | |
| !! | CATTATGTGTTCTTTTAGGA+TGG | - | chr4_3:15335623-15335642 | Msa0631900:intron | 30.0% |
| TGAGTAAATCGAAATCATTC+TGG | + | chr4_3:15335729-15335748 | None:intergenic | 30.0% | |
| TATAAACATCCATATGACCT+TGG | - | chr4_3:15335821-15335840 | Msa0631900:intron | 30.0% | |
| ACAGATGTCAAATTCTCATA+CGG | + | chr4_3:15335848-15335867 | None:intergenic | 30.0% | |
| AGTTCAATGAGAAAAAAGCA+GGG | + | chr4_3:15335932-15335951 | None:intergenic | 30.0% | |
| AAGTTCAATGAGAAAAAAGC+AGG | + | chr4_3:15335933-15335952 | None:intergenic | 30.0% | |
| CTCATTGAACTTCATTCATT+TGG | - | chr4_3:15335941-15335960 | Msa0631900:intron | 30.0% | |
| ! | TTTTCCTTTCTGCAATCATT+TGG | - | chr4_3:15335968-15335987 | Msa0631900:intron | 30.0% |
| AACGCTTTCAAATAATAGCT+AGG | + | chr4_3:15336113-15336132 | None:intergenic | 30.0% | |
| AACATAATTCAACTCAACTG+AGG | - | chr4_3:15336134-15336153 | Msa0631900:intron | 30.0% | |
| GTTTCACATAATCAGTTAAG+CGG | + | chr4_3:15336392-15336411 | None:intergenic | 30.0% | |
| GATACTATAATCAGATGTGA+AGG | - | chr4_3:15336430-15336449 | Msa0631900:intron | 30.0% | |
| ! | ACATCTAAGTGAAGTTTTCA+CGG | - | chr4_3:15336737-15336756 | Msa0631900:intron | 30.0% |
| !! | CGTTAAAAAGGCATTGAATT+TGG | + | chr4_3:15336848-15336867 | None:intergenic | 30.0% |
| !! | GTTGGTGATTTACGTTAAAA+AGG | + | chr4_3:15336860-15336879 | None:intergenic | 30.0% |
| ATACATTACATAATTGCCTC+GGG | + | chr4_3:15336926-15336945 | None:intergenic | 30.0% | |
| CCTAATCTATGTCTAACAAA+TGG | + | chr4_3:15336983-15337002 | None:intergenic | 30.0% | |
| ! | CCATTTGTTAGACATAGATT+AGG | - | chr4_3:15336980-15336999 | Msa0631900:intron | 30.0% |
| TCTATCAATGAAGACGAAGA+CGG | + | chr4_3:15332513-15332532 | None:intergenic | 35.0% | |
| TCTTCGTCTTCATTGATAGA+TGG | - | chr4_3:15332513-15332532 | Msa0631900:three_prime_UTR | 35.0% | |
| GTCTTCATTGATAGATGGTT+TGG | - | chr4_3:15332518-15332537 | Msa0631900:three_prime_UTR | 35.0% | |
| GATCGGTGAAAATAGCTAAA+CGG | + | chr4_3:15332616-15332635 | None:intergenic | 35.0% | |
| !! | TTTAGCTATTTTCACCGATC+CGG | - | chr4_3:15332616-15332635 | Msa0631900:three_prime_UTR | 35.0% |
| GGTCAATCAATCATAACCAA+TGG | + | chr4_3:15333045-15333064 | None:intergenic | 35.0% | |
| !!! | TTTTTGTTGTTAATCTGCGG+TGG | - | chr4_3:15333364-15333383 | Msa0631900:intron | 35.0% |
| CTTAACCTATCCAGCTAAAA+GGG | + | chr4_3:15333397-15333416 | None:intergenic | 35.0% | |
| TGGATAGGTTAAGCAATAGT+AGG | - | chr4_3:15333404-15333423 | Msa0631900:intron | 35.0% | |
| !! | TGTAGTCTTGATCAAGGTTT+TGG | - | chr4_3:15333437-15333456 | Msa0631900:intron | 35.0% |
| !! | GTAGTCTTGATCAAGGTTTT+GGG | - | chr4_3:15333438-15333457 | Msa0631900:intron | 35.0% |
| GCGGTTACTTCATAATTCTT+AGG | - | chr4_3:15333475-15333494 | Msa0631900:intron | 35.0% | |
| !! | AAAAACATCATGATAGTGGG+AGG | + | chr4_3:15333594-15333613 | None:intergenic | 35.0% |
| !! | ATACCGCAACAATATTTTGG+GGG | + | chr4_3:15333798-15333817 | None:intergenic | 35.0% |
| ! | GCTATACCGCAACAATATTT+TGG | + | chr4_3:15333801-15333820 | None:intergenic | 35.0% |
| AAATATTGTTGCGGTATAGC+GGG | - | chr4_3:15333801-15333820 | Msa0631900:intron | 35.0% | |
| ! | GCCATTACCTCAGTTTATTT+TGG | + | chr4_3:15333913-15333932 | None:intergenic | 35.0% |
| ! | AGGTAATGGCTATAAGTTGA+GGG | - | chr4_3:15333923-15333942 | Msa0631900:intron | 35.0% |
| ! | CTATAAGTTGAGGGCATATT+TGG | - | chr4_3:15333932-15333951 | Msa0631900:intron | 35.0% |
| ! | ATAAGTTGAGGGCATATTTG+GGG | - | chr4_3:15333934-15333953 | Msa0631900:intron | 35.0% |
| TTAATCTGCATGATCAACAG+TGG | + | chr4_3:15334054-15334073 | None:intergenic | 35.0% | |
| ! | ATGTCATGTGTTGATGTGTT+TGG | - | chr4_3:15334150-15334169 | Msa0631900:CDS | 35.0% |
| TAGGAATATAACGCAACAGA+AGG | + | chr4_3:15334176-15334195 | None:intergenic | 35.0% | |
| ! | AAAATGCTAACTAGTTTCCC+TGG | - | chr4_3:15334198-15334217 | Msa0631900:CDS | 35.0% |
| ! | AAATGCTAACTAGTTTCCCT+GGG | - | chr4_3:15334199-15334218 | Msa0631900:CDS | 35.0% |
| GGAAAAATATCAGCTTCTAG+GGG | + | chr4_3:15334467-15334486 | None:intergenic | 35.0% | |
| GTGGAAAAATATCAGCTTCT+AGG | + | chr4_3:15334469-15334488 | None:intergenic | 35.0% | |
| CCAGCATATGAGCATTAATT+AGG | + | chr4_3:15334543-15334562 | None:intergenic | 35.0% | |
| CCTAATTAATGCTCATATGC+TGG | - | chr4_3:15334540-15334559 | Msa0631900:intron | 35.0% | |
| !!! | TCATATGCTGGCTTTTAAAG+TGG | - | chr4_3:15334552-15334571 | Msa0631900:intron | 35.0% |
| GTAAAGATGACCTCTTTCAA+GGG | + | chr4_3:15334601-15334620 | None:intergenic | 35.0% | |
| AGTAAAGATGACCTCTTTCA+AGG | + | chr4_3:15334602-15334621 | None:intergenic | 35.0% | |
| TATCCATACCACATCAAATG+CGG | + | chr4_3:15334672-15334691 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTGGAACTGTGAGC+AGG | - | chr4_3:15334927-15334946 | Msa0631900:intron | 35.0% |
| !!! | TTTTTTTGGAACTGTGAGCA+GGG | - | chr4_3:15334928-15334947 | Msa0631900:intron | 35.0% |
| ATTTGCGTGAATGAAATCTG+TGG | - | chr4_3:15335296-15335315 | Msa0631900:intron | 35.0% | |
| !!! | ACTTTTTTGCAGGTTGTTTC+TGG | - | chr4_3:15335574-15335593 | Msa0631900:intron | 35.0% |
| !!! | CTTTTTTGCAGGTTGTTTCT+GGG | - | chr4_3:15335575-15335594 | Msa0631900:intron | 35.0% |
| ACATAACAATACCACGATAG+AGG | - | chr4_3:15335663-15335682 | Msa0631900:intron | 35.0% | |
| ACTCAATTAGGAAGTTGTGT+TGG | - | chr4_3:15335744-15335763 | Msa0631900:intron | 35.0% | |
| ! | TTGTGTTGGCAGTATTATGA+AGG | - | chr4_3:15335758-15335777 | Msa0631900:intron | 35.0% |
| CAGATGTCAAATTCTCATAC+GGG | + | chr4_3:15335847-15335866 | None:intergenic | 35.0% | |
| ATGACCAAATGATTGCAGAA+AGG | + | chr4_3:15335975-15335994 | None:intergenic | 35.0% | |
| ACCTTTAGTGAGATCATAGA+CGG | + | chr4_3:15336711-15336730 | None:intergenic | 35.0% | |
| !!! | TTGTTAGGTTTTGGATGATG+TGG | - | chr4_3:15337034-15337053 | Msa0631900:intron | 35.0% |
| !!! | TGTTAGGTTTTGGATGATGT+GGG | - | chr4_3:15337035-15337054 | Msa0631900:intron | 35.0% |
| AAAAGAAAAACGGCTCATCA+AGG | - | chr4_3:15337097-15337116 | Msa0631900:intron | 35.0% | |
| AGCGATTGATGAAATGACGA+CGG | + | chr4_3:15332474-15332493 | None:intergenic | 40.0% | |
| !! | TTTGGTCTTTTCTCTTCACC+TGG | - | chr4_3:15332536-15332555 | Msa0631900:three_prime_UTR | 40.0% |
| AACACACATGAAAGCGATGA+CGG | + | chr4_3:15332585-15332604 | None:intergenic | 40.0% | |
| !! | TTAGCTATTTTCACCGATCC+GGG | - | chr4_3:15332617-15332636 | Msa0631900:three_prime_UTR | 40.0% |
| GCTTAACCTATCCAGCTAAA+AGG | + | chr4_3:15333398-15333417 | None:intergenic | 40.0% | |
| GTGTAATTCTTGCGTTTCCT+AGG | - | chr4_3:15333622-15333641 | Msa0631900:intron | 40.0% | |
| CAACCCCCAAAATATTGTTG+CGG | - | chr4_3:15333792-15333811 | Msa0631900:intron | 40.0% | |
| ! | TTCCTTAATCTTCGGTGTAG+CGG | + | chr4_3:15333838-15333857 | None:intergenic | 40.0% |
| ! | GAGGTAATGGCTATAAGTTG+AGG | - | chr4_3:15333922-15333941 | Msa0631900:intron | 40.0% |
| !! | GGCATATTTGGGGTTTTTAC+CGG | - | chr4_3:15333944-15333963 | Msa0631900:intron | 40.0% |
| TTACCGGAGTTTCATTGTAG+TGG | - | chr4_3:15333960-15333979 | Msa0631900:CDS | 40.0% | |
| !! | AGTGACTGTATTGGCTAGTA+TGG | + | chr4_3:15333986-15334005 | None:intergenic | 40.0% |
| ACTAAACAAACGCAGCACAA+TGG | - | chr4_3:15334006-15334025 | Msa0631900:CDS | 40.0% | |
| CTAAACAAACGCAGCACAAT+GGG | - | chr4_3:15334007-15334026 | Msa0631900:CDS | 40.0% | |
| TAAACAAACGCAGCACAATG+GGG | - | chr4_3:15334008-15334027 | Msa0631900:CDS | 40.0% | |
| ! | AATGCTAACTAGTTTCCCTG+GGG | - | chr4_3:15334200-15334219 | Msa0631900:CDS | 40.0% |
| !! | AAAGTGGACTGTCGTATATG+CGG | - | chr4_3:15334568-15334587 | Msa0631900:intron | 40.0% |
| GACAATGTTGTATACGAGTC+TGG | - | chr4_3:15334628-15334647 | Msa0631900:CDS | 40.0% | |
| TGTATACGAGTCTGGCTATA+AGG | - | chr4_3:15334636-15334655 | Msa0631900:CDS | 40.0% | |
| ATACTAACCCGCATTTGATG+TGG | - | chr4_3:15334661-15334680 | Msa0631900:CDS | 40.0% | |
| ATCCATACCACATCAAATGC+GGG | + | chr4_3:15334671-15334690 | None:intergenic | 40.0% | |
| !!! | GCTTATAGTGAGAGCACTTT+TGG | + | chr4_3:15334972-15334991 | None:intergenic | 40.0% |
| ! | GAACACATCTTTTACAACCC+CGG | + | chr4_3:15335014-15335033 | None:intergenic | 40.0% |
| GTAAGGATCACCATTGCATT+TGG | - | chr4_3:15335119-15335138 | Msa0631900:intron | 40.0% | |
| ACATACCATGGAGTAAATGC+AGG | + | chr4_3:15335212-15335231 | None:intergenic | 40.0% | |
| TCATTCACGCAAATACAACG+TGG | + | chr4_3:15335290-15335309 | None:intergenic | 40.0% | |
| ATGGTCTGTGCTAGATTTGA+TGG | - | chr4_3:15335354-15335373 | Msa0631900:intron | 40.0% | |
| !! | GTTGGTAGTCTAGCTTATGA+TGG | - | chr4_3:15335434-15335453 | Msa0631900:intron | 40.0% |
| CACGATGAAGACAAAAATGG+CGG | - | chr4_3:15335461-15335480 | Msa0631900:intron | 40.0% | |
| CAATGAGAAAAAAGCAGGGT+GGG | + | chr4_3:15335928-15335947 | None:intergenic | 40.0% | |
| TCAATGAGAAAAAAGCAGGG+TGG | + | chr4_3:15335929-15335948 | None:intergenic | 40.0% | |
| GCTGATCAGTGAAAAAGTCA+TGG | + | chr4_3:15336091-15336110 | None:intergenic | 40.0% | |
| ACCTAAGTCCAGAACCTATA+TGG | + | chr4_3:15336682-15336701 | None:intergenic | 40.0% | |
| TAGTGAGATCATAGACGGTT+CGG | + | chr4_3:15336706-15336725 | None:intergenic | 40.0% | |
| ACCGTCTATGATCTCACTAA+AGG | - | chr4_3:15336707-15336726 | Msa0631900:intron | 40.0% | |
| ACCAACAATTGCTGAAGTGT+AGG | - | chr4_3:15336874-15336893 | Msa0631900:intron | 40.0% | |
| ACCTACACTTCAGCAATTGT+TGG | + | chr4_3:15336878-15336897 | None:intergenic | 40.0% | |
| ACCTAACAAGACTGGAAGAT+GGG | + | chr4_3:15337023-15337042 | None:intergenic | 40.0% | |
| AACCTAACAAGACTGGAAGA+TGG | + | chr4_3:15337024-15337043 | None:intergenic | 40.0% | |
| !!! | CTTCCAGTCTTGTTAGGTTT+TGG | - | chr4_3:15337025-15337044 | Msa0631900:intron | 40.0% |
| CATCCAAAACCTAACAAGAC+TGG | + | chr4_3:15337031-15337050 | None:intergenic | 40.0% | |
| !!! | GTTAGGTTTTGGATGATGTG+GGG | - | chr4_3:15337036-15337055 | Msa0631900:intron | 40.0% |
| TTGGATGAAATGTGCTGTCA+AGG | - | chr4_3:15337189-15337208 | Msa0631900:intron | 40.0% | |
| TGGATGAAATGTGCTGTCAA+GGG | - | chr4_3:15337190-15337209 | Msa0631900:intron | 40.0% | |
| GATGAAATGACGACGGTTAC+CGG | + | chr4_3:15332467-15332486 | None:intergenic | 45.0% | |
| ATCAATGAAGACGAAGACGG+TGG | + | chr4_3:15332510-15332529 | None:intergenic | 45.0% | |
| ACAACGGCGTTTATGATTCC+AGG | + | chr4_3:15332557-15332576 | None:intergenic | 45.0% | |
| ! | AGCGATGACGGTGAAAACAA+CGG | + | chr4_3:15332573-15332592 | None:intergenic | 45.0% |
| ACATCAGGCGTATACGTAGA+AGG | + | chr4_3:15332650-15332669 | None:intergenic | 45.0% | |
| ATGAGCTACGACAAATCACG+TGG | - | chr4_3:15332894-15332913 | Msa0631900:three_prime_UTR | 45.0% | |
| ! | TGGAATGCTTCCCTTTTAGC+TGG | - | chr4_3:15333384-15333403 | Msa0631900:intron | 45.0% |
| !! | TGCTTCCCTTTTAGCTGGAT+AGG | - | chr4_3:15333389-15333408 | Msa0631900:intron | 45.0% |
| !!! | TGATCAAGGTTTTGGGAGCT+TGG | - | chr4_3:15333445-15333464 | Msa0631900:intron | 45.0% |
| !! | AACATCATGATAGTGGGAGG+TGG | + | chr4_3:15333591-15333610 | None:intergenic | 45.0% |
| TTGAGCGAAGACTAACACCT+AGG | + | chr4_3:15333642-15333661 | None:intergenic | 45.0% | |
| !! | CGCAACAATATTTTGGGGGT+TGG | + | chr4_3:15333794-15333813 | None:intergenic | 45.0% |
| TGGCCACTACAATGAAACTC+CGG | + | chr4_3:15333966-15333985 | None:intergenic | 45.0% | |
| CATGATCAACAGTGGCACTT+AGG | + | chr4_3:15334046-15334065 | None:intergenic | 45.0% | |
| ATTCCTTAACTAGTGCCCCA+GGG | + | chr4_3:15334218-15334237 | None:intergenic | 45.0% | |
| AACCCGCATTTGATGTGGTA+TGG | - | chr4_3:15334666-15334685 | Msa0631900:CDS | 45.0% | |
| ACTTCGTTGAACCATTCACG+TGG | - | chr4_3:15334806-15334825 | Msa0631900:CDS | 45.0% | |
| ACCATTCACGTGGCAGAAAA+AGG | - | chr4_3:15334816-15334835 | Msa0631900:CDS | 45.0% | |
| ! | TCCTTTTTCTGCCACGTGAA+TGG | + | chr4_3:15334820-15334839 | None:intergenic | 45.0% |
| GATTGCCTGCATTTACTCCA+TGG | - | chr4_3:15335204-15335223 | Msa0631900:intron | 45.0% | |
| TCACGCAAATACAACGTGGT+AGG | + | chr4_3:15335286-15335305 | None:intergenic | 45.0% | |
| GCATGTCATAACCTCTATCG+TGG | + | chr4_3:15335677-15335696 | None:intergenic | 45.0% | |
| ATGAAGGAGTGAGAGCTTTG+TGG | - | chr4_3:15335774-15335793 | Msa0631900:intron | 45.0% | |
| ! | AGCTTTGTGGCTTCAAGAGA+AGG | - | chr4_3:15335787-15335806 | Msa0631900:intron | 45.0% |
| GCTTTGTGGCTTCAAGAGAA+GGG | - | chr4_3:15335788-15335807 | Msa0631900:intron | 45.0% | |
| TCAAATTCTCATACGGGCCA+AGG | + | chr4_3:15335841-15335860 | None:intergenic | 45.0% | |
| TCAGATGTGAAGGTGACAGA+TGG | - | chr4_3:15336440-15336459 | Msa0631900:intron | 45.0% | |
| TGGGACCAAATATCCTTAGC+TGG | - | chr4_3:15336639-15336658 | Msa0631900:intron | 45.0% | |
| CACAGCCAGCTAAGGATATT+TGG | + | chr4_3:15336647-15336666 | None:intergenic | 45.0% | |
| CAAATATCCTTAGCTGGCTG+TGG | - | chr4_3:15336645-15336664 | Msa0631900:intron | 45.0% | |
| !! | GAACCTATATGGCTTGCTGT+TGG | + | chr4_3:15336671-15336690 | None:intergenic | 45.0% |
| ACAGCAAGCCATATAGGTTC+TGG | - | chr4_3:15336671-15336690 | Msa0631900:intron | 45.0% | |
| !! | GCCATATAGGTTCTGGACTT+AGG | - | chr4_3:15336678-15336697 | Msa0631900:intron | 45.0% |
| CCTAACAAGACTGGAAGATG+GGG | + | chr4_3:15337022-15337041 | None:intergenic | 45.0% | |
| !! | GCTCATCAAGGTGCTGTAAA+GGG | - | chr4_3:15337109-15337128 | Msa0631900:CDS | 45.0% |
| ! | CTATTTTCACCGATCCGGGT+CGG | - | chr4_3:15332621-15332640 | Msa0631900:three_prime_UTR | 50.0% |
| ! | TATTTTCACCGATCCGGGTC+GGG | - | chr4_3:15332622-15332641 | Msa0631900:three_prime_UTR | 50.0% |
| TTCATGAGCTGTCAGCTCAG+TGG | + | chr4_3:15333125-15333144 | None:intergenic | 50.0% | |
| !! | ATCATGATAGTGGGAGGTGG+CGG | + | chr4_3:15333588-15333607 | None:intergenic | 50.0% |
| GCGCATCAGTTGTACTCAAC+TGG | + | chr4_3:15333702-15333721 | None:intergenic | 50.0% | |
| AACTGATGCGCGCACATTTG+TGG | - | chr4_3:15333711-15333730 | Msa0631900:intron | 50.0% | |
| ! | TATTGTTGCGGTATAGCGGG+TGG | - | chr4_3:15333804-15333823 | Msa0631900:intron | 50.0% |
| ! | TTTCCCTGGGGCACTAGTTA+AGG | - | chr4_3:15334212-15334231 | Msa0631900:intron | 50.0% |
| GATTCCTTAACTAGTGCCCC+AGG | + | chr4_3:15334219-15334238 | None:intergenic | 50.0% | |
| ! | GTTTTCCTTCACTAGTGCCC+CGG | - | chr4_3:15334327-15334346 | Msa0631900:CDS | 50.0% |
| ! | TTTTCCTTCACTAGTGCCCC+GGG | - | chr4_3:15334328-15334347 | Msa0631900:CDS | 50.0% |
| CGGTTGTCTTCCCTTGAAAG+AGG | - | chr4_3:15334588-15334607 | Msa0631900:CDS | 50.0% | |
| !!! | TTTTGGAACTGTGAGCAGGG+TGG | - | chr4_3:15334931-15334950 | Msa0631900:intron | 50.0% |
| !! | GGTTGTTTCTGGGCTCTTAC+TGG | - | chr4_3:15335585-15335604 | Msa0631900:intron | 50.0% |
| TTGTGGCTTCAAGAGAAGGG+TGG | - | chr4_3:15335791-15335810 | Msa0631900:intron | 50.0% | |
| TGTGGCTTCAAGAGAAGGGT+GGG | - | chr4_3:15335792-15335811 | Msa0631900:intron | 50.0% | |
| TCATACGGGCCAAGGTCATA+TGG | + | chr4_3:15335833-15335852 | None:intergenic | 50.0% | |
| AGCAGGGTGGGAGAAAAAAC+AGG | + | chr4_3:15335916-15335935 | None:intergenic | 50.0% | |
| TGGCCAACAGCAAGCCATAT+AGG | - | chr4_3:15336665-15336684 | Msa0631900:intron | 50.0% | |
| ! | GTTTTCACGGTGCTTTGCAG+TGG | - | chr4_3:15336750-15336769 | Msa0631900:intron | 50.0% |
| CTCGGGTATATGCAGCAAAC+AGG | + | chr4_3:15336909-15336928 | None:intergenic | 50.0% | |
| ! | CTGTTTGCTGCATATACCCG+AGG | - | chr4_3:15336907-15336926 | Msa0631900:intron | 50.0% |
| CAAGACTGGAAGATGGGGAA+AGG | + | chr4_3:15337017-15337036 | None:intergenic | 50.0% | |
| !! | CCCCATCTTCCAGTCTTGTT+AGG | - | chr4_3:15337019-15337038 | Msa0631900:intron | 50.0% |
| !! | GGCTCATCAAGGTGCTGTAA+AGG | - | chr4_3:15337108-15337127 | Msa0631900:CDS | 50.0% |
| GAGAAAGCGAAGCAGCAACG+CGG | - | chr4_3:15332416-15332435 | Msa0631900:three_prime_UTR | 55.0% | |
| TACGTAGAAGGAACCCGACC+CGG | + | chr4_3:15332638-15332657 | None:intergenic | 55.0% | |
| TTGGGAGCTTGGCAGTGTTG+CGG | - | chr4_3:15333456-15333475 | Msa0631900:intron | 55.0% | |
| !! | AGGTGGCGGAAATCAGGTTG+CGG | + | chr4_3:15333574-15333593 | None:intergenic | 55.0% |
| ACTCTGTGGCTGCAACGTCA+AGG | + | chr4_3:15333766-15333785 | None:intergenic | 55.0% | |
| GGCCGCTACACCGAAGATTA+AGG | - | chr4_3:15333833-15333852 | Msa0631900:intron | 55.0% | |
| TTTCCTTCACTAGTGCCCCG+GGG | - | chr4_3:15334329-15334348 | Msa0631900:CDS | 55.0% | |
| TCATGCTAACTAGTGCCCCC+GGG | + | chr4_3:15334348-15334367 | None:intergenic | 55.0% | |
| GTCATGCTAACTAGTGCCCC+CGG | + | chr4_3:15334349-15334368 | None:intergenic | 55.0% | |
| GTGAGCAGGGTGGAGATTTG+AGG | - | chr4_3:15334941-15334960 | Msa0631900:intron | 55.0% | |
| AACCCCGGCAATGATGTGCA+CGG | + | chr4_3:15334999-15335018 | None:intergenic | 55.0% | |
| ! | CGGTGCTTTGCAGTGGACTT+TGG | - | chr4_3:15336757-15336776 | Msa0631900:intron | 55.0% |
| AAAGCGAAGCAGCAACGCGG+CGG | - | chr4_3:15332419-15332438 | Msa0631900:three_prime_UTR | 60.0% | |
| CGGCTTCGCGTTCTCGTTTC+CGG | - | chr4_3:15332445-15332464 | Msa0631900:three_prime_UTR | 60.0% | |
| AGAAGGAACCCGACCCGGAT+CGG | + | chr4_3:15332633-15332652 | None:intergenic | 60.0% | |
| ! | GGCGGAAATCAGGTTGCGGT+TGG | + | chr4_3:15333570-15333589 | None:intergenic | 60.0% |
| !! | AGTGGGAGGTGGCGGAAATC+AGG | + | chr4_3:15333580-15333599 | None:intergenic | 60.0% |
| ! | GGGGGTTGGCAGATACTCTG+TGG | + | chr4_3:15333780-15333799 | None:intergenic | 60.0% |
| ! | TCTTCGGTGTAGCGGCCGTA+CGG | + | chr4_3:15333830-15333849 | None:intergenic | 60.0% |
| TTCCTTCACTAGTGCCCCGG+GGG | - | chr4_3:15334330-15334349 | Msa0631900:CDS | 60.0% | |
| CATGCTAACTAGTGCCCCCG+GGG | + | chr4_3:15334347-15334366 | None:intergenic | 60.0% | |
| CTCCCCGTGCACATCATTGC+CGG | - | chr4_3:15334992-15335011 | Msa0631900:intron | 60.0% | |
| TCCCCGTGCACATCATTGCC+GGG | - | chr4_3:15334993-15335012 | Msa0631900:intron | 60.0% | |
| ACCCCGGCAATGATGTGCAC+GGG | + | chr4_3:15334998-15335017 | None:intergenic | 60.0% | |
| CTGTTGGCCACAGCCAGCTA+AGG | + | chr4_3:15336655-15336674 | None:intergenic | 60.0% | |
| !! | CGGTATAGCGGGTGGCCGTA+CGG | - | chr4_3:15333812-15333831 | Msa0631900:intron | 65.0% |
| CGGCAATGATGTGCACGGGG+AGG | + | chr4_3:15334994-15335013 | None:intergenic | 65.0% | |
| CCCCGGCAATGATGTGCACG+GGG | + | chr4_3:15334997-15335016 | None:intergenic | 65.0% | |
| CCCCGTGCACATCATTGCCG+GGG | - | chr4_3:15334994-15335013 | Msa0631900:intron | 65.0% | |
| ! | TGCCCCCGGGGCACTAGTGA+AGG | + | chr4_3:15334335-15334354 | None:intergenic | 70.0% |
| GCGAAGCAGCAACGCGGCGG+CGG | - | chr4_3:15332422-15332441 | Msa0631900:three_prime_UTR | 75.0% | |
| AAGCAGCAACGCGGCGGCGG+CGG | - | chr4_3:15332425-15332444 | Msa0631900:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 15332410 | 15337400 | 15332410 | ID=Msa0631900;Name=Msa0631900 |
| chr4_3 | mRNA | 15332410 | 15337400 | 15332410 | ID=Msa0631900-mRNA-1;Parent=Msa0631900;Name=Msa0631900-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.87|0.77|1|0.5|0.44|9|535|291 |
| chr4_3 | exon | 15332410 | 15332914 | 15332410 | ID=Msa0631900-mRNA-1:exon:4376;Parent=Msa0631900-mRNA-1 |
| chr4_3 | exon | 15333032 | 15333175 | 15333032 | ID=Msa0631900-mRNA-1:exon:4375;Parent=Msa0631900-mRNA-1 |
| chr4_3 | exon | 15333945 | 15334040 | 15333945 | ID=Msa0631900-mRNA-1:exon:4374;Parent=Msa0631900-mRNA-1 |
| chr4_3 | exon | 15334126 | 15334224 | 15334126 | ID=Msa0631900-mRNA-1:exon:4373;Parent=Msa0631900-mRNA-1 |
| chr4_3 | exon | 15334308 | 15334385 | 15334308 | ID=Msa0631900-mRNA-1:exon:4372;Parent=Msa0631900-mRNA-1 |
| chr4_3 | exon | 15334585 | 15334686 | 15334585 | ID=Msa0631900-mRNA-1:exon:4371;Parent=Msa0631900-mRNA-1 |
| chr4_3 | exon | 15334769 | 15334861 | 15334769 | ID=Msa0631900-mRNA-1:exon:4370;Parent=Msa0631900-mRNA-1 |
| chr4_3 | exon | 15337101 | 15337189 | 15337101 | ID=Msa0631900-mRNA-1:exon:4369;Parent=Msa0631900-mRNA-1 |
| chr4_3 | exon | 15337196 | 15337400 | 15337196 | ID=Msa0631900-mRNA-1:exon:4368;Parent=Msa0631900-mRNA-1 |
| chr4_3 | CDS | 15337196 | 15337400 | 15337196 | ID=Msa0631900-mRNA-1:cds;Parent=Msa0631900-mRNA-1 |
| chr4_3 | CDS | 15337101 | 15337189 | 15337101 | ID=Msa0631900-mRNA-1:cds;Parent=Msa0631900-mRNA-1 |
| chr4_3 | CDS | 15334769 | 15334861 | 15334769 | ID=Msa0631900-mRNA-1:cds;Parent=Msa0631900-mRNA-1 |
| chr4_3 | CDS | 15334585 | 15334686 | 15334585 | ID=Msa0631900-mRNA-1:cds;Parent=Msa0631900-mRNA-1 |
| chr4_3 | CDS | 15334308 | 15334385 | 15334308 | ID=Msa0631900-mRNA-1:cds;Parent=Msa0631900-mRNA-1 |
| chr4_3 | CDS | 15334126 | 15334224 | 15334126 | ID=Msa0631900-mRNA-1:cds;Parent=Msa0631900-mRNA-1 |
| chr4_3 | CDS | 15333945 | 15334040 | 15333945 | ID=Msa0631900-mRNA-1:cds;Parent=Msa0631900-mRNA-1 |
| chr4_3 | CDS | 15333062 | 15333175 | 15333062 | ID=Msa0631900-mRNA-1:cds;Parent=Msa0631900-mRNA-1 |
| chr4_3 | three_prime_UTR | 15333032 | 15333061 | 15333032 | ID=Msa0631900-mRNA-1:three_prime_utr;Parent=Msa0631900-mRNA-1 |
| chr4_3 | three_prime_UTR | 15332410 | 15332914 | 15332410 | ID=Msa0631900-mRNA-1:three_prime_utr;Parent=Msa0631900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
