AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0178440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178440 MtrunA17_Chr1g0208221 98.031 254 5 0 1 254 1 254 0.0 512
Msa0178440 MtrunA17_Chr1g0208201 70.472 254 67 1 7 252 80 333 5.38e-124 355
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178440 AT4G35220.1 79.574 235 46 1 20 252 37 271 1.37e-139 393
Msa0178440 AT4G34180.1 68.966 232 71 1 23 253 24 255 7.99e-117 335
Msa0178440 AT1G44542.1 68.722 227 70 1 28 253 45 271 6.74e-115 330

Find 82 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGCAAACATTGCCTTAT+TGG 0.080684 1_4:-65730926 None:intergenic
CACCATTGCGGCAATTTATT+TGG 0.156294 1_4:-65730812 None:intergenic
TTGCCGCAATGGTGTCTTTA+TGG 0.169887 1_4:+65730821 Msa0178440:three_prime_UTR
CTGGGACATCATCAAGTTTC+AGG 0.182140 1_4:-65730393 None:intergenic
CAGTCCATTGCTTACCTCTT+AGG 0.209663 1_4:+65730428 Msa0178440:CDS
ATGCATTCTAATCAAGTATT+AGG 0.250536 1_4:+65730480 Msa0178440:CDS
TGCTTACCTCTTAGGTTGGC+TGG 0.313330 1_4:+65730436 Msa0178440:CDS
GTCTCAAAAGCTGGCATGTC+TGG 0.322806 1_4:-65726159 None:intergenic
ATATTACACTTTAACTTTAG+TGG 0.330864 1_4:+65730859 Msa0178440:three_prime_UTR
TTCCATTGTCGTATACTTCC+CGG 0.343600 1_4:-65726107 None:intergenic
AATAAACAAACACTCCAATA+AGG 0.369224 1_4:+65730912 Msa0178440:three_prime_UTR
CCAAGAGATTCTAATATAAC+TGG 0.371707 1_4:+65726494 Msa0178440:CDS
ACAAACAATGAGCGTATGTT+TGG 0.387643 1_4:+65731024 Msa0178440:three_prime_UTR
CTCGACTTGCACGTCCTCAA+TGG 0.395006 1_4:+65726345 Msa0178440:CDS
ACCTGTCGGTATTCAATGTT+CGG 0.395211 1_4:-65727596 None:intergenic
GTTTGCATTGCAATTTCCTA+TGG 0.401184 1_4:+65730939 Msa0178440:three_prime_UTR
TTCGATCATTACTTCGATGC+TGG 0.405597 1_4:+65726306 Msa0178440:CDS
AACACTGATATTAAACTTGT+TGG 0.407040 1_4:+65728218 Msa0178440:CDS
GAGTACACGCTTTACACCTC+TGG 0.430957 1_4:-65727571 None:intergenic
CCATTGCTTACCTCTTAGGT+TGG 0.432052 1_4:+65730432 Msa0178440:CDS
CCAGTTATATTAGAATCTCT+TGG 0.437156 1_4:-65726494 None:intergenic
TTGATTAGAATGCATCGTAT+TGG 0.437438 1_4:-65730472 None:intergenic
ATGAAGCTTCCAACTCATAC+TGG 0.440868 1_4:+65726255 Msa0178440:CDS
GGCAATTTATTTGGTTCGAC+AGG 0.456557 1_4:-65730803 None:intergenic
TGAGCGTATGTTTGGTTTGG+TGG 0.459520 1_4:+65731032 Msa0178440:three_prime_UTR
AATCATAAGAAGCAACAGAT+AGG 0.460354 1_4:-65729346 None:intergenic
CTTAGGTTGGCTGGTGCTGA+GGG 0.467458 1_4:+65730445 Msa0178440:CDS
CAATGAGCGTATGTTTGGTT+TGG 0.471717 1_4:+65731029 Msa0178440:three_prime_UTR
CTTCCCGGCGAGGAGGGATA+AGG 0.477141 1_4:-65726092 None:intergenic
CAGTGCTGTCTCAGAATCCA+TGG 0.480149 1_4:+65730685 Msa0178440:three_prime_UTR
TTGCTTGCTTATATGAGTAC+TGG 0.489080 1_4:-65725951 None:intergenic
TGGACTGAATATAATCCTGC+TGG 0.490321 1_4:-65730412 None:intergenic
GGTACTCATGTTGATGCTCC+TGG 0.490330 1_4:+65726276 Msa0178440:CDS
GCCGCCGTTCACCGCCGTTA+CGG 0.494137 1_4:-65726064 None:intergenic
TCTTAGGTTGGCTGGTGCTG+AGG 0.495320 1_4:+65730444 Msa0178440:CDS
TAACCTTATCCCTCCTCGCC+GGG 0.497045 1_4:+65726089 Msa0178440:CDS
GGTAGTAGCGTTAGCCTTGG+TGG 0.508800 1_4:+65726032 Msa0178440:CDS
TCAGCACCAGCCAACCTAAG+AGG 0.516231 1_4:-65730442 None:intergenic
GGAACATCAACTAATAGAGC+AGG 0.518734 1_4:-65726473 None:intergenic
GTATGTATGTTTAGAGCAAG+AGG 0.527028 1_4:+65730729 Msa0178440:three_prime_UTR
CATTTCAGAGTTATTAGCGA+TGG 0.534072 1_4:-65726235 None:intergenic
CTCAGAATCCATGGGAGGAG+TGG 0.542287 1_4:+65730694 Msa0178440:three_prime_UTR
GAATTTGACTCGAGCTATGT+GGG 0.544572 1_4:+65728161 Msa0178440:CDS
CCATCTTTAGTCTCAAAAGC+TGG 0.545793 1_4:-65726168 None:intergenic
AACCAAATAAATTGCCGCAA+TGG 0.546249 1_4:+65730810 Msa0178440:three_prime_UTR
TAATGATCGAAGACATGTCC+AGG 0.547630 1_4:-65726294 None:intergenic
ATAACCTTATCCCTCCTCGC+CGG 0.552149 1_4:+65726088 Msa0178440:CDS
TGGAGTTTACAAAATTCCAT+AGG 0.554371 1_4:-65730955 None:intergenic
AAACTTGATGATGTCCCAGC+AGG 0.554591 1_4:+65730397 Msa0178440:CDS
TAGGCGGCTTATGTTTCAGA+AGG 0.554622 1_4:+65728139 Msa0178440:intron
TTTGAGACTAAAGATGGTAT+CGG 0.559563 1_4:+65726174 Msa0178440:CDS
ATGATGATCCACTCCTCCCA+TGG 0.559584 1_4:-65730702 None:intergenic
CGTATACTTCCCGGCGAGGA+GGG 0.566543 1_4:-65726098 None:intergenic
TCGTATACTTCCCGGCGAGG+AGG 0.574729 1_4:-65726099 None:intergenic
GGAATTTGACTCGAGCTATG+TGG 0.575810 1_4:+65728160 Msa0178440:CDS
ATCTCCGTAACGGCGGTGAA+CGG 0.576262 1_4:+65726060 Msa0178440:CDS
TGTGAAATTCGAGGCACAGA+TGG 0.579249 1_4:-65730975 None:intergenic
AGTACACGCTTTACACCTCT+GGG 0.579818 1_4:-65727570 None:intergenic
GGACTGAATATAATCCTGCT+GGG 0.585452 1_4:-65730411 None:intergenic
TCCGAACATTGAATACCGAC+AGG 0.592325 1_4:+65727595 Msa0178440:CDS
ACATGAGTACCAGTATGAGT+TGG 0.596387 1_4:-65726264 None:intergenic
TCCGTAACGGCGGTGAACGG+CGG 0.613340 1_4:+65726063 Msa0178440:CDS
TATGTGGGATTCACTGTGGA+TGG 0.615993 1_4:+65728176 Msa0178440:CDS
AGCGGTAGTAGCGTTAGCCT+TGG 0.620390 1_4:+65726029 Msa0178440:CDS
GAAGATGAAACAAACCATTG+AGG 0.623787 1_4:-65726359 None:intergenic
GAATCTTCGATATCACTCAC+AGG 0.624678 1_4:+65726130 Msa0178440:CDS
ATGGTATCGGTCAATTCTTG+TGG 0.629228 1_4:+65726187 Msa0178440:CDS
TCGAAATATGAAGTATCAAG+CGG 0.632220 1_4:+65726011 Msa0178440:exon
AGTGCTGTCTCAGAATCCAT+GGG 0.635648 1_4:+65730686 Msa0178440:three_prime_UTR
CGCCGGGAAGTATACGACAA+TGG 0.637447 1_4:+65726105 Msa0178440:CDS
CCAACCTAAGAGGTAAGCAA+TGG 0.639046 1_4:-65730432 None:intergenic
GGATGGCGCAAAGTGGCTAG+TGG 0.640794 1_4:+65728193 Msa0178440:CDS
GAACATCAACTAATAGAGCA+GGG 0.644133 1_4:-65726472 None:intergenic
GGTGGTTACAATCTCCGTAA+CGG 0.645027 1_4:+65726050 Msa0178440:CDS
TCACTGTGGATGGCGCAAAG+TGG 0.674320 1_4:+65728186 Msa0178440:CDS
TTGTCGTATACTTCCCGGCG+AGG 0.682285 1_4:-65726102 None:intergenic
GCTGTCTCAGAATCCATGGG+AGG 0.707249 1_4:+65730689 Msa0178440:three_prime_UTR
GAGCTATGTGGGATTCACTG+TGG 0.716645 1_4:+65728172 Msa0178440:CDS
GGTTACAATCTCCGTAACGG+CGG 0.716921 1_4:+65726053 Msa0178440:CDS
TACGGAGATTGTAACCACCA+AGG 0.724247 1_4:-65726046 None:intergenic
GCTCCATAAAGACACCATTG+CGG 0.736681 1_4:-65730824 None:intergenic
AAGTCATTAAATATTCCCAG+AGG 0.764509 1_4:+65727555 Msa0178440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACATTTAATTATGATTTA+TGG + chr1_4:65727980-65727999 Msa0178440:intron 10.0%
!! AACATTTAATTATGATTTAT+GGG + chr1_4:65727981-65728000 Msa0178440:intron 10.0%
!!! TTTGGTTTAATTTCATATTT+AGG + chr1_4:65726556-65726575 Msa0178440:intron 15.0%
!! ACAACATTAATAATTAATGT+GGG + chr1_4:65726908-65726927 Msa0178440:intron 15.0%
!!! TACATTTTTGCTTATAATTT+AGG + chr1_4:65727254-65727273 Msa0178440:intron 15.0%
!! ATAACATATTTAATCAATTC+TGG - chr1_4:65727308-65727327 None:intergenic 15.0%
!!! AATCAATTGTTATTTTGATT+TGG + chr1_4:65727442-65727461 Msa0178440:intron 15.0%
!! TATTAGATGAAGATAATATT+TGG + chr1_4:65728402-65728421 Msa0178440:intron 15.0%
!! AATTGAAGATATTTATAACT+AGG - chr1_4:65728686-65728705 None:intergenic 15.0%
!! AATTGAAAGAGAAAAAAATT+GGG - chr1_4:65729259-65729278 None:intergenic 15.0%
!!! TTCAATTCTTAACATTTTTT+TGG + chr1_4:65729272-65729291 Msa0178440:intron 15.0%
!!! AATTAGTTTTAAGTCAAAAA+GGG - chr1_4:65729481-65729500 None:intergenic 15.0%
!!! AAATTGATTTTGATGTATTT+AGG + chr1_4:65729726-65729745 Msa0178440:intron 15.0%
!! AAAAATAAAAAAAATGCAAC+AGG - chr1_4:65730541-65730560 None:intergenic 15.0%
!!! ATAGCTTCTGATAATTTTTT+TGG + chr1_4:65726538-65726557 Msa0178440:intron 20.0%
!! CTTATAGAAATAAGTTATGT+TGG - chr1_4:65726641-65726660 None:intergenic 20.0%
!!! GTTTGACTTTATTTTATCTT+TGG + chr1_4:65726708-65726727 Msa0178440:intron 20.0%
!!! TATCTTTGGTAATAGAAATA+AGG + chr1_4:65726722-65726741 Msa0178440:intron 20.0%
!! AAGATGATCATTATAATTAG+GGG - chr1_4:65726885-65726904 None:intergenic 20.0%
!! GAAGATGATCATTATAATTA+GGG - chr1_4:65726886-65726905 None:intergenic 20.0%
!! AGAAGATGATCATTATAATT+AGG - chr1_4:65726887-65726906 None:intergenic 20.0%
!! CACAACATTAATAATTAATG+TGG + chr1_4:65726907-65726926 Msa0178440:intron 20.0%
!! CAACATTAATAATTAATGTG+GGG + chr1_4:65726909-65726928 Msa0178440:intron 20.0%
!! AACATTAATAATTAATGTGG+GGG + chr1_4:65726910-65726929 Msa0178440:intron 20.0%
!! AAAAATGTACATAAATGCAT+TGG - chr1_4:65727243-65727262 None:intergenic 20.0%
!!! AATTCTTTGAAAGTTTTCTA+TGG - chr1_4:65727360-65727379 None:intergenic 20.0%
!! TGAGAAAGTTTGATTAAAAT+AGG - chr1_4:65727385-65727404 None:intergenic 20.0%
!! TATAAAAGACACTGAAATTT+GGG - chr1_4:65727412-65727431 None:intergenic 20.0%
!! CATAAAATCTAATATCTTTG+TGG - chr1_4:65728861-65728880 None:intergenic 20.0%
!!! TAGGCATAATTTTATTTTCT+TGG + chr1_4:65728905-65728924 Msa0178440:intron 20.0%
!! GAGTTATTCTAAATCTTATT+AGG + chr1_4:65729061-65729080 Msa0178440:intron 20.0%
!!! TTCACCATTTCATTTTTTAT+TGG + chr1_4:65729095-65729114 Msa0178440:intron 20.0%
!! GAATCCAATAAAAAATGAAA+TGG - chr1_4:65729102-65729121 None:intergenic 20.0%
!! TATTGGATTCAAGATTATAA+TGG + chr1_4:65729112-65729131 Msa0178440:intron 20.0%
!! ATTGAAAGAGAAAAAAATTG+GGG - chr1_4:65729258-65729277 None:intergenic 20.0%
!! GAATTGAAAGAGAAAAAAAT+TGG - chr1_4:65729260-65729279 None:intergenic 20.0%
!!! CAATTAGTTTTAAGTCAAAA+AGG - chr1_4:65729482-65729501 None:intergenic 20.0%
!!! AAAGATATTTTCGAATTTGT+TGG + chr1_4:65730202-65730221 Msa0178440:intron 20.0%
!!! TTTAAATTTCTGGTCTTTAA+AGG + chr1_4:65730558-65730577 Msa0178440:intron 20.0%
!!! TTAAATTTCTGGTCTTTAAA+GGG + chr1_4:65730559-65730578 Msa0178440:intron 20.0%
!! TGAAAAGAATCAAATTCTTT+CGG - chr1_4:65730624-65730643 None:intergenic 20.0%
!!! ATATTACACTTTAACTTTAG+TGG + chr1_4:65730859-65730878 Msa0178440:three_prime_UTR 20.0%
!! TTGTTTATGTGATATTTTGC+AGG + chr1_4:65726449-65726468 Msa0178440:intron 25.0%
!!! TATTTAGGACATGTTTTGAT+TGG + chr1_4:65726571-65726590 Msa0178440:intron 25.0%
! ACATAAACAATTACTCATTC+TGG + chr1_4:65726748-65726767 Msa0178440:intron 25.0%
! GTGTTTATCATATACTACTT+AGG - chr1_4:65727280-65727299 None:intergenic 25.0%
! TAAATATGTTATACTGTACG+AGG + chr1_4:65727316-65727335 Msa0178440:intron 25.0%
! GTATAAAAGACACTGAAATT+TGG - chr1_4:65727413-65727432 None:intergenic 25.0%
!!! TTTGATTTGGAAAAACTAGA+AGG + chr1_4:65727455-65727474 Msa0178440:intron 25.0%
! ATATCACAAGTTAACTGAAT+TGG + chr1_4:65727629-65727648 Msa0178440:intron 25.0%
! TGTATTCATATTCTTTGTAC+TGG + chr1_4:65727885-65727904 Msa0178440:intron 25.0%
! CAATGTAGCATATTAAAGTT+GGG + chr1_4:65727939-65727958 Msa0178440:intron 25.0%
! AATGTAGCATATTAAAGTTG+GGG + chr1_4:65727940-65727959 Msa0178440:intron 25.0%
! AACACTGATATTAAACTTGT+TGG + chr1_4:65728218-65728237 Msa0178440:CDS 25.0%
!! TTCAATTGAATGAGTTGAAT+AGG + chr1_4:65728886-65728905 Msa0178440:intron 25.0%
!!! TTTTATTTTCTTGGTGAACA+TGG + chr1_4:65728914-65728933 Msa0178440:intron 25.0%
!! ATAAATAATGGAATAGAGAG+AGG - chr1_4:65728989-65729008 None:intergenic 25.0%
! TCCATTATTTATTTGCAACT+TGG + chr1_4:65728997-65729016 Msa0178440:intron 25.0%
! TCCAAGTTGCAAATAAATAA+TGG - chr1_4:65729001-65729020 None:intergenic 25.0%
! TCTAAATCTTATTAGGTAAC+TGG + chr1_4:65729068-65729087 Msa0178440:intron 25.0%
! TTATTTATGTGATGTCATGT+AGG + chr1_4:65729314-65729333 Msa0178440:intron 25.0%
!!! TAATTTTCACTTTTCAGTGT+TGG + chr1_4:65729584-65729603 Msa0178440:intron 25.0%
! TTGAGTGTAAAAATCACATT+TGG - chr1_4:65729817-65729836 None:intergenic 25.0%
! AATGTTAAGTGGTTTATGTT+CGG - chr1_4:65729874-65729893 None:intergenic 25.0%
! ATCATATCCAATTGTCAAAT+TGG + chr1_4:65730022-65730041 Msa0178440:intron 25.0%
! ATGCATTCTAATCAAGTATT+AGG + chr1_4:65730480-65730499 Msa0178440:CDS 25.0%
! AATAAACAAACACTCCAATA+AGG + chr1_4:65730912-65730931 Msa0178440:three_prime_UTR 25.0%
! TCGAAATATGAAGTATCAAG+CGG + chr1_4:65726011-65726030 Msa0178440:exon 30.0%
! TTTGAGACTAAAGATGGTAT+CGG + chr1_4:65726174-65726193 Msa0178440:CDS 30.0%
CCAGTTATATTAGAATCTCT+TGG - chr1_4:65726497-65726516 None:intergenic 30.0%
CCAAGAGATTCTAATATAAC+TGG + chr1_4:65726494-65726513 Msa0178440:CDS 30.0%
ACCTACTTTCACACTTATTA+AGG + chr1_4:65726791-65726810 Msa0178440:intron 30.0%
TCCTTAATAAGTGTGAAAGT+AGG - chr1_4:65726795-65726814 None:intergenic 30.0%
TTCACACTTATTAAGGATGA+CGG + chr1_4:65726798-65726817 Msa0178440:intron 30.0%
!! TTCATTGTATTAGCTTTGAG+CGG + chr1_4:65727030-65727049 Msa0178440:intron 30.0%
AAGTCATTAAATATTCCCAG+AGG + chr1_4:65727555-65727574 Msa0178440:CDS 30.0%
!! ACAAACACATAATTGGTCTT+TGG - chr1_4:65727801-65727820 None:intergenic 30.0%
AGTTGAGACAAACACATAAT+TGG - chr1_4:65727808-65727827 None:intergenic 30.0%
TACATTCAGATAACACATAC+AGG - chr1_4:65727859-65727878 None:intergenic 30.0%
GCAATGTAGCATATTAAAGT+TGG + chr1_4:65727938-65727957 Msa0178440:intron 30.0%
ACAAGCTTCAGTTTCTAATT+AGG - chr1_4:65728111-65728130 None:intergenic 30.0%
!! CTGATATTAAACTTGTTGGT+AGG + chr1_4:65728222-65728241 Msa0178440:intron 30.0%
AAATGTCGGAATAAATGTCA+CGG - chr1_4:65728283-65728302 None:intergenic 30.0%
TACAAATGCAAAACTAGACA+CGG - chr1_4:65728310-65728329 None:intergenic 30.0%
!! CGCTTTATACATTGTTTTTC+TGG + chr1_4:65728338-65728357 Msa0178440:intron 30.0%
ATTCATAAGTGCAACTAATC+AGG - chr1_4:65728496-65728515 None:intergenic 30.0%
TTAGTTGCACTTATGAATAG+TGG + chr1_4:65728498-65728517 Msa0178440:intron 30.0%
! AGAGAACATCTAAAACACAA+CGG - chr1_4:65728589-65728608 None:intergenic 30.0%
! ATGTTCTCTCTGATTTTTGT+TGG + chr1_4:65728600-65728619 Msa0178440:intron 30.0%
TAAGTCAAAGTTTAGGGAAA+CGG - chr1_4:65728766-65728785 None:intergenic 30.0%
AGTAGTAGTATGGTCATAAA+AGG - chr1_4:65729182-65729201 None:intergenic 30.0%
!!! TTTTTTTGGCTCAATTTTGC+TGG + chr1_4:65729286-65729305 Msa0178440:intron 30.0%
AATCATAAGAAGCAACAGAT+AGG - chr1_4:65729349-65729368 None:intergenic 30.0%
TTTAAAAACACAAGGTGAGA+TGG - chr1_4:65729380-65729399 None:intergenic 30.0%
!! ACCTTGTGTTTTTAAAAGAC+AGG + chr1_4:65729384-65729403 Msa0178440:CDS 30.0%
!! CCTTGTGTTTTTAAAAGACA+GGG + chr1_4:65729385-65729404 Msa0178440:CDS 30.0%
!! GTTTTAAGTCAAAAAGGGTA+GGG - chr1_4:65729476-65729495 None:intergenic 30.0%
!!! AGTTTTAAGTCAAAAAGGGT+AGG - chr1_4:65729477-65729496 None:intergenic 30.0%
TAATTGCATCTCAATTCTCA+AGG + chr1_4:65729496-65729515 Msa0178440:intron 30.0%
AAGAAAAATCCCAGGTTTAT+TGG - chr1_4:65729548-65729567 None:intergenic 30.0%
GATTAACAAAGAAAAATCCC+AGG - chr1_4:65729556-65729575 None:intergenic 30.0%
!!! AGTGTTGGTATCATTTGTTT+TGG + chr1_4:65729599-65729618 Msa0178440:intron 30.0%
! TTTAAAGTTCCATACACAAC+TGG + chr1_4:65729626-65729645 Msa0178440:intron 30.0%
TTAAAGTTCCATACACAACT+GGG + chr1_4:65729627-65729646 Msa0178440:intron 30.0%
TTTGTAACCATGAACATCAT+AGG + chr1_4:65729676-65729695 Msa0178440:intron 30.0%
TTGTAACCATGAACATCATA+GGG + chr1_4:65729677-65729696 Msa0178440:intron 30.0%
! AAAGTGAGTTGAATGTTAAG+TGG - chr1_4:65729885-65729904 None:intergenic 30.0%
ACACTTACCAATTTGACAAT+TGG - chr1_4:65730032-65730051 None:intergenic 30.0%
CAAACAAAACATCAATGAAC+TGG - chr1_4:65730109-65730128 None:intergenic 30.0%
TTGTTCCTTTGGATAATTGA+AGG + chr1_4:65730266-65730285 Msa0178440:intron 30.0%
TTGATTAGAATGCATCGTAT+TGG - chr1_4:65730475-65730494 None:intergenic 30.0%
TGGAGTTTACAAAATTCCAT+AGG - chr1_4:65730958-65730977 None:intergenic 30.0%
! ACAGAATTTTGTGAAATTCG+AGG - chr1_4:65730987-65731006 None:intergenic 30.0%
TTGCTTGCTTATATGAGTAC+TGG - chr1_4:65725954-65725973 None:intergenic 35.0%
! CTTCCAAAAAGCATGAAGAA+CGG + chr1_4:65726210-65726229 Msa0178440:CDS 35.0%
CATTTCAGAGTTATTAGCGA+TGG - chr1_4:65726238-65726257 None:intergenic 35.0%
GAAGATGAAACAAACCATTG+AGG - chr1_4:65726362-65726381 None:intergenic 35.0%
GAACATCAACTAATAGAGCA+GGG - chr1_4:65726475-65726494 None:intergenic 35.0%
TAAATACTTGCGAGACTGTT+TGG + chr1_4:65726606-65726625 Msa0178440:intron 35.0%
TGAAAATTCCGCCTTAATTG+TGG + chr1_4:65726948-65726967 Msa0178440:intron 35.0%
GCTCAAAGCTAATACAATGA+AGG - chr1_4:65727031-65727050 None:intergenic 35.0%
!! TCATTGTATTAGCTTTGAGC+GGG + chr1_4:65727031-65727050 Msa0178440:intron 35.0%
CTTGATAAGAGTTTGCAAAG+AGG + chr1_4:65727086-65727105 Msa0178440:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr1_4:65727133-65727152 None:intergenic 35.0%
ACAAAACAGTTGGAAATCTG+GGG - chr1_4:65727157-65727176 None:intergenic 35.0%
CACAAAACAGTTGGAAATCT+GGG - chr1_4:65727158-65727177 None:intergenic 35.0%
TCACAAAACAGTTGGAAATC+TGG - chr1_4:65727159-65727178 None:intergenic 35.0%
GTTTAGTGTCACAAAACAGT+TGG - chr1_4:65727167-65727186 None:intergenic 35.0%
ATATGTTATACTGTACGAGG+AGG + chr1_4:65727319-65727338 Msa0178440:intron 35.0%
ATTTGGAAAAACTAGAAGGC+TGG + chr1_4:65727459-65727478 Msa0178440:intron 35.0%
AATGACTTCATAACTTCAGC+TGG - chr1_4:65727543-65727562 None:intergenic 35.0%
ATATTGTGCACATTACCTGT+CGG - chr1_4:65727613-65727632 None:intergenic 35.0%
AACTGAATTGGCACTGTTAT+AGG + chr1_4:65727641-65727660 Msa0178440:intron 35.0%
ACTGAATTGGCACTGTTATA+GGG + chr1_4:65727642-65727661 Msa0178440:intron 35.0%
TTATAGGGAGAATCACAACT+AGG + chr1_4:65727657-65727676 Msa0178440:intron 35.0%
TATAGGGAGAATCACAACTA+GGG + chr1_4:65727658-65727677 Msa0178440:intron 35.0%
ATCAGCAGAGTAGTTTGAAT+TGG - chr1_4:65727712-65727731 None:intergenic 35.0%
!! ATTGGTCTTTGGTAAATTCC+TGG - chr1_4:65727790-65727809 None:intergenic 35.0%
! ATTCTTTGTACTGGTGTCAA+TGG + chr1_4:65727894-65727913 Msa0178440:intron 35.0%
GCTACTTATCGTGAACAATA+TGG - chr1_4:65727920-65727939 None:intergenic 35.0%
ATCAAGGTCTATTTGAACAG+TGG - chr1_4:65728016-65728035 None:intergenic 35.0%
!! AGCATATAAGTGGACTATCA+AGG - chr1_4:65728032-65728051 None:intergenic 35.0%
GATCTTATCGAGCATATAAG+TGG - chr1_4:65728042-65728061 None:intergenic 35.0%
!! CTGAAGCTTGTTGAACTATT+AGG + chr1_4:65728120-65728139 Msa0178440:intron 35.0%
!! AAGCTTGTTGAACTATTAGG+CGG + chr1_4:65728123-65728142 Msa0178440:intron 35.0%
AATGTCGGAATAAATGTCAC+GGG - chr1_4:65728282-65728301 None:intergenic 35.0%
TTACAAGAGATTCCCTATAG+CGG - chr1_4:65728553-65728572 None:intergenic 35.0%
TAAAACACAACGGCATATTC+GGG - chr1_4:65728579-65728598 None:intergenic 35.0%
CTAAAACACAACGGCATATT+CGG - chr1_4:65728580-65728599 None:intergenic 35.0%
! CTGATTTTTGTTGGACTCTT+TGG + chr1_4:65728609-65728628 Msa0178440:intron 35.0%
ATACCACAGTACACATGAAA+AGG - chr1_4:65728732-65728751 None:intergenic 35.0%
! TTCCCTAAACTTTGACTTAG+CGG + chr1_4:65728767-65728786 Msa0178440:intron 35.0%
AATATCTTTGTGGTCAGTAG+TGG - chr1_4:65728851-65728870 None:intergenic 35.0%
GTCATAAAAGGAGAAGATCA+AGG - chr1_4:65729170-65729189 None:intergenic 35.0%
AGTACATCACAGTAGTAGTA+TGG - chr1_4:65729192-65729211 None:intergenic 35.0%
!! CCCTGTCTTTTAAAAACACA+AGG - chr1_4:65729388-65729407 None:intergenic 35.0%
TCTCAATTCTCAAGGTCTTT+AGG + chr1_4:65729504-65729523 Msa0178440:intron 35.0%
CTCAATTCTCAAGGTCTTTA+GGG + chr1_4:65729505-65729524 Msa0178440:intron 35.0%
ATGTTACTCTCCAATAAACC+TGG + chr1_4:65729535-65729554 Msa0178440:intron 35.0%
TGTTACTCTCCAATAAACCT+GGG + chr1_4:65729536-65729555 Msa0178440:intron 35.0%
CTGAGTTAGAATCAACTCTT+AGG - chr1_4:65729776-65729795 None:intergenic 35.0%
! CTAAGAGTTGATTCTAACTC+AGG + chr1_4:65729774-65729793 Msa0178440:intron 35.0%
! AGTGATGTCTTTTGTTCCTT+TGG + chr1_4:65730255-65730274 Msa0178440:intron 35.0%
TTCGACCTTCAATTATCCAA+AGG - chr1_4:65730274-65730293 None:intergenic 35.0%
!! AGTTCATGTCATGTTGATTC+TGG - chr1_4:65730333-65730352 None:intergenic 35.0%
CTAACTACTCCAAATACTTC+AGG + chr1_4:65730351-65730370 Msa0178440:intron 35.0%
! GAATGCTTTCCTGAAGTATT+TGG - chr1_4:65730363-65730382 None:intergenic 35.0%
! TTAGGTTATGTGCGATTTTG+AGG + chr1_4:65730498-65730517 Msa0178440:exon 35.0%
! ACAGAATTTGAAATTGCTGC+AGG + chr1_4:65730659-65730678 Msa0178440:intron 35.0%
! GTATGTATGTTTAGAGCAAG+AGG + chr1_4:65730729-65730748 Msa0178440:three_prime_UTR 35.0%
AACCAAATAAATTGCCGCAA+TGG + chr1_4:65730810-65730829 Msa0178440:three_prime_UTR 35.0%
CAATGCAAACATTGCCTTAT+TGG - chr1_4:65730929-65730948 None:intergenic 35.0%
GTTTGCATTGCAATTTCCTA+TGG + chr1_4:65730939-65730958 Msa0178440:three_prime_UTR 35.0%
ACAAACAATGAGCGTATGTT+TGG + chr1_4:65731024-65731043 Msa0178440:three_prime_UTR 35.0%
TTCCATTGTCGTATACTTCC+CGG - chr1_4:65726110-65726129 None:intergenic 40.0%
GAATCTTCGATATCACTCAC+AGG + chr1_4:65726130-65726149 Msa0178440:CDS 40.0%
CCATCTTTAGTCTCAAAAGC+TGG - chr1_4:65726171-65726190 None:intergenic 40.0%
!!! CCAGCTTTTGAGACTAAAGA+TGG + chr1_4:65726168-65726187 Msa0178440:CDS 40.0%
!! ATGGTATCGGTCAATTCTTG+TGG + chr1_4:65726187-65726206 Msa0178440:CDS 40.0%
! GAACCGTTCTTCATGCTTTT+TGG - chr1_4:65726216-65726235 None:intergenic 40.0%
ATGAAGCTTCCAACTCATAC+TGG + chr1_4:65726255-65726274 Msa0178440:CDS 40.0%
ACATGAGTACCAGTATGAGT+TGG - chr1_4:65726267-65726286 None:intergenic 40.0%
TAATGATCGAAGACATGTCC+AGG - chr1_4:65726297-65726316 None:intergenic 40.0%
TTCGATCATTACTTCGATGC+TGG + chr1_4:65726306-65726325 Msa0178440:CDS 40.0%
GGAACATCAACTAATAGAGC+AGG - chr1_4:65726476-65726495 None:intergenic 40.0%
!! AATTAATGTGGGGGTGTTTC+TGG + chr1_4:65726919-65726938 Msa0178440:intron 40.0%
! GAGTCTTATCTAACCGATGT+GGG - chr1_4:65727067-65727086 None:intergenic 40.0%
! AGAGTCTTATCTAACCGATG+TGG - chr1_4:65727068-65727087 None:intergenic 40.0%
GATAAGAGTTTGCAAAGAGG+AGG + chr1_4:65727089-65727108 Msa0178440:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr1_4:65727131-65727150 Msa0178440:intron 40.0%
ACCTGTCGGTATTCAATGTT+CGG - chr1_4:65727599-65727618 None:intergenic 40.0%
ATGTCACTACTTGCACTTCA+TGG - chr1_4:65727767-65727786 None:intergenic 40.0%
GTAGCATATTAAAGTTGGGG+TGG + chr1_4:65727943-65727962 Msa0178440:intron 40.0%
! GAATTTGACTCGAGCTATGT+GGG + chr1_4:65728161-65728180 Msa0178440:CDS 40.0%
! CTACATGTATGAAGCACCTA+TGG - chr1_4:65728373-65728392 None:intergenic 40.0%
GTAATCAATAGCAGTCGTAG+CGG + chr1_4:65728429-65728448 Msa0178440:intron 40.0%
! TAGCCTTTTCATGTGTACTG+TGG + chr1_4:65728726-65728745 Msa0178440:intron 40.0%
AGCCGCTAAGTCAAAGTTTA+GGG - chr1_4:65728772-65728791 None:intergenic 40.0%
!! TTTGTGGTCAGTAGTGGATA+GGG - chr1_4:65728845-65728864 None:intergenic 40.0%
AGCTATCCCTATGATGTTCA+TGG - chr1_4:65729686-65729705 None:intergenic 40.0%
GTATCTACAACGTGTGTGTT+GGG - chr1_4:65729964-65729983 None:intergenic 40.0%
AGTATCTACAACGTGTGTGT+TGG - chr1_4:65729965-65729984 None:intergenic 40.0%
! GTAGATACTAGCTCTCTCTT+TGG + chr1_4:65729976-65729995 Msa0178440:intron 40.0%
ATCTCAGTGCTTGGTTGATT+TGG + chr1_4:65730140-65730159 Msa0178440:intron 40.0%
GGACTGAATATAATCCTGCT+GGG - chr1_4:65730414-65730433 None:intergenic 40.0%
TGGACTGAATATAATCCTGC+TGG - chr1_4:65730415-65730434 None:intergenic 40.0%
AGAACTTAAAGCAGGAACTG+TGG - chr1_4:65730600-65730619 None:intergenic 40.0%
! GGCAATTTATTTGGTTCGAC+AGG - chr1_4:65730806-65730825 None:intergenic 40.0%
CACCATTGCGGCAATTTATT+TGG - chr1_4:65730815-65730834 None:intergenic 40.0%
CAATGAGCGTATGTTTGGTT+TGG + chr1_4:65731029-65731048 Msa0178440:three_prime_UTR 40.0%
TACGGAGATTGTAACCACCA+AGG - chr1_4:65726049-65726068 None:intergenic 45.0%
GGTGGTTACAATCTCCGTAA+CGG + chr1_4:65726050-65726069 Msa0178440:CDS 45.0%
ACTAGGGCACACCACAATTA+AGG - chr1_4:65726962-65726981 None:intergenic 45.0%
CAAACCAGAGGCTGCAATTT+AGG - chr1_4:65726987-65727006 None:intergenic 45.0%
!! TTGTATTAGCTTTGAGCGGG+TGG + chr1_4:65727034-65727053 Msa0178440:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - chr1_4:65727124-65727143 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + chr1_4:65727121-65727140 Msa0178440:intron 45.0%
AGTACACGCTTTACACCTCT+GGG - chr1_4:65727573-65727592 None:intergenic 45.0%
TCCGAACATTGAATACCGAC+AGG + chr1_4:65727595-65727614 Msa0178440:CDS 45.0%
AAGTGCAAGTAGTGACATCC+AGG + chr1_4:65727769-65727788 Msa0178440:intron 45.0%
TAGGCGGCTTATGTTTCAGA+AGG + chr1_4:65728139-65728158 Msa0178440:intron 45.0%
! GGAATTTGACTCGAGCTATG+TGG + chr1_4:65728160-65728179 Msa0178440:CDS 45.0%
TATGTGGGATTCACTGTGGA+TGG + chr1_4:65728176-65728195 Msa0178440:CDS 45.0%
CTAGACACGGTCACAAATGT+CGG - chr1_4:65728297-65728316 None:intergenic 45.0%
! GTATGAAGCACCTATGGAGT+CGG - chr1_4:65728367-65728386 None:intergenic 45.0%
CTTATGAATAGTGGCTGCTG+CGG + chr1_4:65728507-65728526 Msa0178440:intron 45.0%
CAGCCGCTAAGTCAAAGTTT+AGG - chr1_4:65728773-65728792 None:intergenic 45.0%
!! CTTTGTGGTCAGTAGTGGAT+AGG - chr1_4:65728846-65728865 None:intergenic 45.0%
AACGTGTGTGTTGGGTTATG+CGG - chr1_4:65729956-65729975 None:intergenic 45.0%
GCACATCAAATCTCAGTGCT+TGG + chr1_4:65730131-65730150 Msa0178440:intron 45.0%
CTGGGACATCATCAAGTTTC+AGG - chr1_4:65730396-65730415 None:intergenic 45.0%
!! AAACTTGATGATGTCCCAGC+AGG + chr1_4:65730397-65730416 Msa0178440:CDS 45.0%
CTTTCGGCAGAACTTAAAGC+AGG - chr1_4:65730608-65730627 None:intergenic 45.0%
AGTGCTGTCTCAGAATCCAT+GGG + chr1_4:65730686-65730705 Msa0178440:three_prime_UTR 45.0%
TTGCCGCAATGGTGTCTTTA+TGG + chr1_4:65730821-65730840 Msa0178440:three_prime_UTR 45.0%
GCTCCATAAAGACACCATTG+CGG - chr1_4:65730827-65730846 None:intergenic 45.0%
TGTGAAATTCGAGGCACAGA+TGG - chr1_4:65730978-65730997 None:intergenic 45.0%
!!! TTTTTTTATTTTTAAATTTC+TGG + chr1_4:65730548-65730567 Msa0178440:intron 5.0%
GGTTACAATCTCCGTAACGG+CGG + chr1_4:65726053-65726072 Msa0178440:CDS 50.0%
ATAACCTTATCCCTCCTCGC+CGG + chr1_4:65726088-65726107 Msa0178440:CDS 50.0%
GTCTCAAAAGCTGGCATGTC+TGG - chr1_4:65726162-65726181 None:intergenic 50.0%
GGTACTCATGTTGATGCTCC+TGG + chr1_4:65726276-65726295 Msa0178440:CDS 50.0%
AGGGCACACCACAATTAAGG+CGG - chr1_4:65726959-65726978 None:intergenic 50.0%
GGCTGCAATTTAGGCGACTA+GGG - chr1_4:65726978-65726997 None:intergenic 50.0%
AGGCTGCAATTTAGGCGACT+AGG - chr1_4:65726979-65726998 None:intergenic 50.0%
CTGCAATGAAGGCAAACCAG+AGG - chr1_4:65726999-65727018 None:intergenic 50.0%
! CTCTGGTTTGCCTTCATTGC+AGG + chr1_4:65726997-65727016 Msa0178440:intron 50.0%
GGTGTTAGAGCCTGCAATGA+AGG - chr1_4:65727010-65727029 None:intergenic 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + chr1_4:65727051-65727070 Msa0178440:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - chr1_4:65727119-65727138 None:intergenic 50.0%
GAGTACACGCTTTACACCTC+TGG - chr1_4:65727574-65727593 None:intergenic 50.0%
GAGCTATGTGGGATTCACTG+TGG + chr1_4:65728172-65728191 Msa0178440:CDS 50.0%
!! TTTCTGGACACCGACTCCAT+AGG + chr1_4:65728354-65728373 Msa0178440:intron 50.0%
! GCGCTTATGTGCCACTATAG+CGG - chr1_4:65728463-65728482 None:intergenic 50.0%
! TGGCTGCTGCGGACTAATAA+CGG + chr1_4:65728518-65728537 Msa0178440:intron 50.0%
GAGAAGATCAAGGTGCAGAG+TGG - chr1_4:65729160-65729179 None:intergenic 50.0%
CCAAAGCTCCCAGTTGTGTA+TGG - chr1_4:65729638-65729657 None:intergenic 50.0%
CCATACACAACTGGGAGCTT+TGG + chr1_4:65729635-65729654 Msa0178440:intron 50.0%
CAGTGCTGTCTCAGAATCCA+TGG + chr1_4:65730685-65730704 Msa0178440:three_prime_UTR 50.0%
ATGATGATCCACTCCTCCCA+TGG - chr1_4:65730705-65730724 None:intergenic 50.0%
! AGCGGTAGTAGCGTTAGCCT+TGG + chr1_4:65726029-65726048 Msa0178440:CDS 55.0%
!! GGTAGTAGCGTTAGCCTTGG+TGG + chr1_4:65726032-65726051 Msa0178440:CDS 55.0%
ATCTCCGTAACGGCGGTGAA+CGG + chr1_4:65726060-65726079 Msa0178440:CDS 55.0%
TAACCTTATCCCTCCTCGCC+GGG + chr1_4:65726089-65726108 Msa0178440:CDS 55.0%
TTGTCGTATACTTCCCGGCG+AGG - chr1_4:65726105-65726124 None:intergenic 55.0%
! CGCCGGGAAGTATACGACAA+TGG + chr1_4:65726105-65726124 Msa0178440:CDS 55.0%
! CTCGACTTGCACGTCCTCAA+TGG + chr1_4:65726345-65726364 Msa0178440:CDS 55.0%
GTCGCCTAAATTGCAGCCTC+TGG + chr1_4:65726980-65726999 Msa0178440:intron 55.0%
GCACTCCTCACCTTACAAGC+CGG + chr1_4:65727111-65727130 Msa0178440:intron 55.0%
TCACTGTGGATGGCGCAAAG+TGG + chr1_4:65728186-65728205 Msa0178440:CDS 55.0%
!! TAGCAGTCGTAGCGGACTAG+CGG + chr1_4:65728437-65728456 Msa0178440:intron 55.0%
ACGGCTGTAGTTGCCGCTAT+AGG + chr1_4:65728537-65728556 Msa0178440:intron 55.0%
CGGCTGTAGTTGCCGCTATA+GGG + chr1_4:65728538-65728557 Msa0178440:intron 55.0%
! CCAAAGCGCTATAGCGTAGC+AGG - chr1_4:65728804-65728823 None:intergenic 55.0%
CCTGCTACGCTATAGCGCTT+TGG + chr1_4:65728801-65728820 Msa0178440:intron 55.0%
GCTACGCTATAGCGCTTTGG+CGG + chr1_4:65728804-65728823 Msa0178440:intron 55.0%
! TAGTGGATAGGGCTGTCTGG+CGG - chr1_4:65728834-65728853 None:intergenic 55.0%
!! CAGTAGTGGATAGGGCTGTC+TGG - chr1_4:65728837-65728856 None:intergenic 55.0%
TCAGCACCAGCCAACCTAAG+AGG - chr1_4:65730445-65730464 None:intergenic 55.0%
!! TCTTAGGTTGGCTGGTGCTG+AGG + chr1_4:65730444-65730463 Msa0178440:CDS 55.0%
!! CTTAGGTTGGCTGGTGCTGA+GGG + chr1_4:65730445-65730464 Msa0178440:CDS 55.0%
GCTGTCTCAGAATCCATGGG+AGG + chr1_4:65730689-65730708 Msa0178440:three_prime_UTR 55.0%
CTCAGAATCCATGGGAGGAG+TGG + chr1_4:65730694-65730713 Msa0178440:three_prime_UTR 55.0%
CGTATACTTCCCGGCGAGGA+GGG - chr1_4:65726101-65726120 None:intergenic 60.0%
TCGTATACTTCCCGGCGAGG+AGG - chr1_4:65726102-65726121 None:intergenic 60.0%
GGATGGCGCAAAGTGGCTAG+TGG + chr1_4:65728193-65728212 Msa0178440:CDS 60.0%
CGCTATAGCGCTTTGGCGGT+CGG + chr1_4:65728808-65728827 Msa0178440:intron 60.0%
TCCGTAACGGCGGTGAACGG+CGG + chr1_4:65726063-65726082 Msa0178440:CDS 65.0%
CTTCCCGGCGAGGAGGGATA+AGG - chr1_4:65726095-65726114 None:intergenic 65.0%
!! CGGACTAGCGGCCGCTATAG+TGG + chr1_4:65728449-65728468 Msa0178440:intron 65.0%
GCCGCCGTTCACCGCCGTTA+CGG - chr1_4:65726067-65726086 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 65725937 65731053 65725937 ID=Msa0178440;Name=Msa0178440
chr1_4 mRNA 65725937 65731053 65725937 ID=Msa0178440-mRNA-1;Parent=Msa0178440;Name=Msa0178440-mRNA-1;_AED=0.17;_eAED=0.17;_QI=81|1|1|1|0.83|0.71|7|391|254
chr1_4 exon 65725937 65726366 65725937 ID=Msa0178440-mRNA-1:exon:21422;Parent=Msa0178440-mRNA-1
chr1_4 exon 65726471 65726515 65726471 ID=Msa0178440-mRNA-1:exon:21423;Parent=Msa0178440-mRNA-1
chr1_4 exon 65727544 65727616 65727544 ID=Msa0178440-mRNA-1:exon:21424;Parent=Msa0178440-mRNA-1
chr1_4 exon 65728142 65728239 65728142 ID=Msa0178440-mRNA-1:exon:21425;Parent=Msa0178440-mRNA-1
chr1_4 exon 65729336 65729406 65729336 ID=Msa0178440-mRNA-1:exon:21426;Parent=Msa0178440-mRNA-1
chr1_4 exon 65730373 65730519 65730373 ID=Msa0178440-mRNA-1:exon:21427;Parent=Msa0178440-mRNA-1
chr1_4 exon 65730681 65731053 65730681 ID=Msa0178440-mRNA-1:exon:21428;Parent=Msa0178440-mRNA-1
chr1_4 five_prime_UTR 65725937 65726017 65725937 ID=Msa0178440-mRNA-1:five_prime_utr;Parent=Msa0178440-mRNA-1
chr1_4 CDS 65726018 65726366 65726018 ID=Msa0178440-mRNA-1:cds;Parent=Msa0178440-mRNA-1
chr1_4 CDS 65726471 65726515 65726471 ID=Msa0178440-mRNA-1:cds;Parent=Msa0178440-mRNA-1
chr1_4 CDS 65727544 65727616 65727544 ID=Msa0178440-mRNA-1:cds;Parent=Msa0178440-mRNA-1
chr1_4 CDS 65728142 65728239 65728142 ID=Msa0178440-mRNA-1:cds;Parent=Msa0178440-mRNA-1
chr1_4 CDS 65729336 65729406 65729336 ID=Msa0178440-mRNA-1:cds;Parent=Msa0178440-mRNA-1
chr1_4 CDS 65730373 65730501 65730373 ID=Msa0178440-mRNA-1:cds;Parent=Msa0178440-mRNA-1
chr1_4 three_prime_UTR 65730502 65730519 65730502 ID=Msa0178440-mRNA-1:three_prime_utr;Parent=Msa0178440-mRNA-1
chr1_4 three_prime_UTR 65730681 65731053 65730681 ID=Msa0178440-mRNA-1:three_prime_utr;Parent=Msa0178440-mRNA-1
Gene Sequence

>Msa0178440

ATGAAGTATCAAGCGGTAGTAGCGTTAGCCTTGGTGGTTACAATCTCCGTAACGGCGGTGAACGGCGGCGATAACCTTATCCCTCCTCGCCGGGAAGTATACGACAATGGAAGAATCTTCGATATCACTCACAGGTATCAACCAGACATGCCAGCTTTTGAGACTAAAGATGGTATCGGTCAATTCTTGTGGCTTCCAAAAAGCATGAAGAACGGTTCCATCGCTAATAACTCTGAAATGAAGCTTCCAACTCATACTGGTACTCATGTTGATGCTCCTGGACATGTCTTCGATCATTACTTCGATGCTGGATTCGATGTCGATTCTCTCGACTTGCACGTCCTCAATGGCCCTGCTCTATTAGTTGATGTTCCAAGAGATTCTAATATAACTGCTGAAGTTATGAAGTCATTAAATATTCCCAGAGGTGTAAAGCGTGTACTCTTCCGAACATTGAATACCGACAGGCGGCTTATGTTTCAGAAGGAATTTGACTCGAGCTATGTGGGATTCACTGTGGATGGCGCAAAGTGGCTAGTGGAGAACACTGATATTAAACTTGTTGGTATTGATTACCTATCTGTTGCTTCTTATGATTACTTGATTCCATCTCACCTTGTGTTTTTAAAAGACAGGGAAAGCATTCTCGTCGAAAGCCTGAAACTTGATGATGTCCCAGCAGGATTATATTCAGTCCATTGCTTACCTCTTAGGTTGGCTGGTGCTGAGGGATCACCAATACGATGCATTCTAATCAAGTATTAG

Protein sequence

>Msa0178440

MKYQAVVALALVVTISVTAVNGGDNLIPPRREVYDNGRIFDITHRYQPDMPAFETKDGIGQFLWLPKSMKNGSIANNSEMKLPTHTGTHVDAPGHVFDHYFDAGFDVDSLDLHVLNGPALLVDVPRDSNITAEVMKSLNIPRGVKRVLFRTLNTDRRLMFQKEFDSSYVGFTVDGAKWLVENTDIKLVGIDYLSVASYDYLIPSHLVFLKDRESILVESLKLDDVPAGLYSVHCLPLRLAGAEGSPIRCILIKY*