AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0014970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0014970 MtrunA17_Chr1g0165651 98.739 952 11 1 3 954 4 954 0.0 1942
Msa0014970 MtrunA17_Chr7g0257921 35.139 683 372 17 256 928 13 634 1.08e-107 347
Msa0014970 MtrunA17_Chr5g0400101 34.989 463 261 15 472 925 470 901 2.78e-56 212
Msa0014970 MtrunA17_Chr5g0422511 31.081 444 240 12 490 911 330 729 9.94e-40 158
Msa0014970 MtrunA17_Chr7g0228141 28.274 481 259 12 447 905 336 752 3.07e-36 147
Msa0014970 MtrunA17_Chr5g0394941 29.106 481 259 18 469 923 385 809 3.89e-36 147
Msa0014970 MtrunA17_Chr2g0304151 29.019 479 259 17 470 923 387 809 7.73e-36 147
Msa0014970 MtrunA17_Chr8g0343741 25.461 597 291 22 486 950 707 1281 7.29e-30 128
Msa0014970 MtrunA17_Chr2g0334291 27.811 507 235 16 524 922 1578 2061 7.31e-30 128
Msa0014970 MtrunA17_Chr1g0173701 32.812 256 148 7 664 911 111 350 1.73e-26 113
Msa0014970 MtrunA17_Chr5g0433321 33.663 303 168 10 630 919 557 839 9.60e-26 114
Msa0014970 MtrunA17_Chr8g0375181 33.333 294 166 10 630 911 631 906 2.30e-25 114
Msa0014970 MtrunA17_Chr3g0109551 31.293 294 173 9 630 911 614 890 4.24e-25 112
Msa0014970 MtrunA17_Chr3g0109541 31.447 318 186 11 607 911 557 855 8.59e-25 111
Msa0014970 MtrunA17_Chr5g0433371 32.667 300 175 10 630 919 581 863 2.34e-24 110
Msa0014970 MtrunA17_Chr5g0433471 32.237 304 172 10 630 919 579 862 5.16e-24 108
Msa0014970 MtrunA17_Chr8g0375151 31.399 293 170 11 630 911 526 798 5.32e-23 106
Msa0014970 MtrunA17_Chr5g0433421 32.660 297 164 11 630 911 664 939 5.85e-23 105
Msa0014970 MtrunA17_Chr5g0433361 31.864 295 160 13 630 911 559 825 7.82e-21 98.6
Msa0014970 MtrunA17_Chr3g0094211 28.053 303 190 9 630 921 547 832 4.17e-20 96.7
Msa0014970 MtrunA17_Chr8g0375191 30.795 302 173 12 623 911 551 829 7.36e-20 96.3
Msa0014970 MtrunA17_Chr5g0433511 29.070 258 153 10 630 875 598 837 6.34e-12 69.7
Msa0014970 MtrunA17_Chr5g0433331 36.735 98 58 1 826 919 8 105 1.69e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0014970 AT5G35970.1 75.654 879 199 4 75 953 97 960 0.0 1349
Msa0014970 AT2G03270.1 34.453 685 375 16 256 928 7 629 3.13e-110 354
Msa0014970 AT5G47010.1 35.332 467 254 15 472 925 482 913 3.18e-57 215
Msa0014970 AT4G15570.3 30.297 472 250 17 489 933 337 756 9.37e-39 156
Msa0014970 AT4G15570.1 30.297 472 250 17 489 933 337 756 9.37e-39 156
Msa0014970 AT4G15570.2 30.297 472 250 17 489 933 248 667 1.27e-38 155
Msa0014970 AT4G15570.4 30.297 472 250 17 489 933 248 667 1.27e-38 155
Msa0014970 AT1G08840.1 28.942 463 256 12 473 925 882 1281 1.16e-37 154
Msa0014970 AT1G08840.4 28.942 463 256 12 473 925 914 1313 1.24e-37 154
Msa0014970 AT1G08840.2 28.942 463 256 12 473 925 901 1300 1.33e-37 153
Msa0014970 AT1G08840.3 28.942 463 256 12 473 925 917 1316 1.34e-37 153
Msa0014970 AT1G05460.2 29.556 450 244 16 493 921 412 809 1.87e-32 136
Msa0014970 AT1G05460.1 29.556 450 244 16 493 921 412 809 2.49e-32 136
Msa0014970 AT2G19120.1 32.440 336 190 12 633 952 753 1067 8.99e-30 128
Msa0014970 AT1G16800.3 27.778 504 219 19 525 911 1429 1904 6.04e-27 119
Msa0014970 AT1G16800.2 27.778 504 219 19 525 911 1499 1974 6.48e-27 119
Msa0014970 AT1G16800.1 27.778 504 219 19 525 911 1387 1862 6.94e-27 119
Msa0014970 AT4G30100.2 26.654 544 255 20 496 911 660 1187 3.89e-26 116
Msa0014970 AT4G30100.1 26.654 544 255 20 496 911 660 1187 3.89e-26 116
Msa0014970 AT5G52090.1 27.424 361 240 9 559 911 270 616 4.47e-26 115
Msa0014970 AT5G37150.1 30.743 296 172 10 630 911 503 779 8.17e-25 112
Msa0014970 AT5G37140.1 30.128 312 183 11 630 928 361 650 4.34e-23 105
Msa0014970 AT1G65780.1 32.459 305 181 8 626 919 536 826 7.24e-23 105
Msa0014970 AT1G65810.1 30.952 336 195 12 600 919 497 811 1.52e-22 104
Msa0014970 AT1G65810.2 30.952 336 195 12 600 919 497 811 1.64e-22 104
Msa0014970 AT1G65810.3 30.952 336 195 12 600 919 497 811 2.09e-22 104
Msa0014970 AT5G37030.1 27.174 460 259 19 473 912 198 601 2.93e-22 103
Msa0014970 AT4G05540.1 30.068 296 174 10 630 911 407 683 1.22e-21 101
Msa0014970 AT5G37165.1 26.207 290 194 5 630 911 89 366 2.16e-21 98.6

Find 212 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACTTTCTCTAAACTATT+TGG 0.122471 1_1:-23990347 Msa0014970:CDS
GTCGAAACCGATTGAGTTCT+TGG 0.178361 1_1:-23990870 Msa0014970:CDS
GAATCCAATGTTACCTTCTA+TGG 0.206751 1_1:-23987342 Msa0014970:CDS
CATTGCTGTTTGTGATGTTT+TGG 0.239615 1_1:+23992359 None:intergenic
CTTAAGGAGCTTGCAAATTC+AGG 0.240723 1_1:-23991869 Msa0014970:intron
CCCCTCAAACAATTGCTTAT+AGG 0.261799 1_1:+23987273 None:intergenic
ATACTCATGCATGAAAATTA+TGG 0.288033 1_1:-23987152 Msa0014970:three_prime_UTR
TGCTGAGTTACTTGAAGATT+TGG 0.290589 1_1:-23992125 Msa0014970:CDS
ATGCATAACACTTGCATCTA+TGG 0.290906 1_1:+23987062 None:intergenic
AGAAGAATAGTTTGGTAGAT+TGG 0.291762 1_1:-23989744 Msa0014970:CDS
TCTGTTGTTGCAACTCTATT+CGG 0.305233 1_1:-23989793 Msa0014970:CDS
TGAAGATGATGAAGCTAGTT+TGG 0.307407 1_1:+23992465 None:intergenic
TGAGAAGTTCTGACATGTTT+TGG 0.312836 1_1:+23990972 None:intergenic
CAATGCAGCTGTTGATAATA+TGG 0.324332 1_1:-23989521 Msa0014970:CDS
CAGCGTTTCGCCTGCAATAT+AGG 0.325159 1_1:+23989100 None:intergenic
CTAGCTTCATCATCTTCATT+TGG 0.327143 1_1:-23992460 Msa0014970:CDS
GGGAAAGTCGCTAAAGAAAA+AGG 0.330531 1_1:-23989275 Msa0014970:CDS
AAGTGTTATGCATGATACTA+TGG 0.335856 1_1:-23987052 Msa0014970:three_prime_UTR
CCCTACCAAAGTGTCGAATA+TGG 0.337657 1_1:+23987414 None:intergenic
GCGAAACGCTGCATTCTTGC+TGG 0.342576 1_1:-23989088 Msa0014970:CDS
ATAATTACCAGCATAAATTA+AGG 0.344105 1_1:+23988189 None:intergenic
AAGGCATTAGAAGGTGGTTT+AGG 0.346964 1_1:-23989028 Msa0014970:CDS
CACTCTTTCACCCGGAGAAA+TGG 0.354961 1_1:-23990492 Msa0014970:CDS
GACTGAACTACAATAGCATT+TGG 0.358638 1_1:+23987941 None:intergenic
CCAACATCTTTCCAACCAAT+AGG 0.360681 1_1:+23992208 None:intergenic
AGCATTTAGCTTTCGAATCA+TGG 0.361465 1_1:+23989180 None:intergenic
GTTGCAACAACAGAAATTGA+TGG 0.369280 1_1:+23989802 None:intergenic
TCGGAAGCATCATCTTGTTT+AGG 0.371391 1_1:+23990896 None:intergenic
TATTGAAAGGGATGTTGAAT+TGG 0.371567 1_1:-23990948 Msa0014970:CDS
GTTGAAAAGCTTTCAAATGT+TGG 0.374768 1_1:-23989499 Msa0014970:CDS
ACTTCAGTACCGGCAGCTTC+AGG 0.378086 1_1:+23987869 None:intergenic
AACCCTCCTCCAAAACTATC+TGG 0.381690 1_1:+23987377 None:intergenic
TTGCTGGATTCCTATATTGC+AGG 0.383652 1_1:-23989110 Msa0014970:CDS
GGGATCGGCTGCTCCGGTAT+TGG 0.385776 1_1:+23989201 None:intergenic
TTTGGAGGAGGGTTTGGACT+TGG 0.385868 1_1:-23987368 Msa0014970:CDS
CAACATCTTTCCAACCAATA+GGG 0.389485 1_1:+23992209 None:intergenic
AGAGGAAGAAATCTGATCTA+AGG 0.393500 1_1:-23989366 Msa0014970:CDS
ATAGGAACAGCATTCAAATA+AGG 0.395012 1_1:+23992043 None:intergenic
GAAGAATAGTTTGGTAGATT+GGG 0.397230 1_1:-23989743 Msa0014970:CDS
CACGTAGAACCAGATAGTTT+TGG 0.398663 1_1:-23987386 Msa0014970:CDS
AACAGTAGCATCAAAGTCCT+TGG 0.404986 1_1:-23989434 Msa0014970:CDS
GGAATAAATATTGTTCGAGT+TGG 0.408855 1_1:-23989478 Msa0014970:CDS
AAAACTCCTTGGACACTCTT+AGG 0.412479 1_1:+23991049 None:intergenic
ACAACTGGTGTCATGAGTTC+AGG 0.413264 1_1:+23987009 None:intergenic
AGGCAATTGAACCGTCTTGC+TGG 0.414062 1_1:-23989126 Msa0014970:CDS
CACATAGTTCTTGCTGAGGC+TGG 0.415148 1_1:+23990837 None:intergenic
ACGTGAGAGTATGAAATCTA+TGG 0.416536 1_1:-23992164 Msa0014970:CDS
GTAAAGGTTTGGTTGAAGAT+TGG 0.417519 1_1:-23991916 Msa0014970:CDS
TTCCCAACTGTTTCAGAAGT+TGG 0.421180 1_1:+23989293 None:intergenic
ATGGCTTGAGAAGAATAGTT+TGG 0.421263 1_1:-23989752 Msa0014970:CDS
AGTTGAACTTGAGCAACATA+TGG 0.426082 1_1:+23987917 None:intergenic
AGATATGCAGAGTAAAGGTT+TGG 0.428977 1_1:-23991927 Msa0014970:CDS
TTCTGAAATGAAACAAAGAA+TGG 0.429448 1_1:-23992098 Msa0014970:CDS
GTGCGCATTGATCGTATTCA+AGG 0.431412 1_1:-23990317 Msa0014970:CDS
GAATGATGCCATTGCAAGTT+GGG 0.434868 1_1:-23988930 Msa0014970:CDS
TCAGTCTTGGAAATTGCTTA+AGG 0.436272 1_1:-23991885 Msa0014970:CDS
TATTATTTGCTTGAGTAAAC+CGG 0.436762 1_1:+23989591 None:intergenic
CAGCAGAGAGCAATTGCGTT+AGG 0.442940 1_1:-23989670 Msa0014970:CDS
CTTCTCGTGCATGAGAATAT+AGG 0.443297 1_1:-23992235 Msa0014970:CDS
CATCTAGATCAGGCTGGAAC+AGG 0.444736 1_1:-23988262 Msa0014970:CDS
GAATAAGAAGAGGCCACTAT+TGG 0.445426 1_1:-23989644 Msa0014970:CDS
CAAGGAGTTGTGGAAAATCT+AGG 0.450398 1_1:-23990419 Msa0014970:CDS
GATAGAAATCAGTACCTCAT+AGG 0.456201 1_1:+23990277 None:intergenic
CTGGTGTTATTCAAGATTGA+AGG 0.459300 1_1:-23990536 Msa0014970:CDS
ATCCAAGGACCTCCCGGTAC+AGG 0.464985 1_1:-23989619 Msa0014970:CDS
GCCTATAAGCAATTGTTTGA+GGG 0.466799 1_1:-23987274 Msa0014970:three_prime_UTR
TTGGGAGCTGTAGGATTCCT+TGG 0.468710 1_1:-23987545 Msa0014970:CDS
CTTCAAGATATGCAGAGTAA+AGG 0.468784 1_1:-23991932 Msa0014970:CDS
CATATTATCAACAGCTGCAT+TGG 0.469527 1_1:+23989522 None:intergenic
TTGCAACACTAATCCATAGA+AGG 0.470626 1_1:+23987329 None:intergenic
TGCCTATAAGCAATTGTTTG+AGG 0.471982 1_1:-23987275 Msa0014970:three_prime_UTR
CCAAATAGTTTAGAGAAAGT+AGG 0.472362 1_1:+23990347 None:intergenic
GAGTTTAATACCTTAACAAA+AGG 0.472809 1_1:+23988836 None:intergenic
CATTGATCGTATTCAAGGAT+TGG 0.479648 1_1:-23990312 Msa0014970:CDS
TTCTTGCATGCAAGGAGTTG+TGG 0.480322 1_1:-23990429 Msa0014970:CDS
TGCCTGTACCGGGAGGTCCT+TGG 0.481597 1_1:+23989617 None:intergenic
CATTGCAAGTTGGGCTTCGA+AGG 0.482049 1_1:-23988921 Msa0014970:CDS
CGCATTTACAATTTCTCCCA+AGG 0.484487 1_1:+23989417 None:intergenic
GTTCTTGCTGAGGCTGGCTA+TGG 0.485427 1_1:+23990843 None:intergenic
AGGGATGATTCATTAGCTGC+AGG 0.486808 1_1:-23989322 Msa0014970:CDS
ACTGAACTACAATAGCATTT+GGG 0.487577 1_1:+23987942 None:intergenic
TGAAGTTCTATCTAGTGCTC+AGG 0.488890 1_1:-23989236 Msa0014970:CDS
AAGATCTAAGACAATGTTTG+AGG 0.490016 1_1:-23989342 Msa0014970:CDS
TCTGAAATGAAACAAAGAAT+GGG 0.491088 1_1:-23992097 Msa0014970:CDS
AAAATATCACAGGAGCTAGT+TGG 0.492157 1_1:+23989056 None:intergenic
TCTCACACAAACCATTTCTC+CGG 0.493829 1_1:+23990481 None:intergenic
GCATTTAGCTTTCGAATCAT+GGG 0.496716 1_1:+23989181 None:intergenic
AATCATGGGATCGGCTGCTC+CGG 0.497771 1_1:+23989195 None:intergenic
GTTGAACTTGAGCAACATAT+GGG 0.498421 1_1:+23987918 None:intergenic
CGCCAACTTCTGAAACAGTT+GGG 0.498428 1_1:-23989295 Msa0014970:CDS
CTCAATCGGTTTCGACGGAT+CGG 0.498763 1_1:+23990877 None:intergenic
AACCCTTTCACCTTGTTCCA+CGG 0.498978 1_1:+23989561 None:intergenic
ATCGGCTGCTCCGGTATTGG+TGG 0.499889 1_1:+23989204 None:intergenic
TGATGTTGTTGCAGCCTACA+TGG 0.499973 1_1:-23988357 Msa0014970:intron
TAAACCGGTCTTGCCTGTAC+CGG 0.501079 1_1:+23989606 None:intergenic
ATTCTTGTTCATATTCTCAA+AGG 0.503307 1_1:+23992258 None:intergenic
GTTGTGCTTGCCACCAATAC+CGG 0.504279 1_1:-23989214 Msa0014970:CDS
CGCCGTGGAACAAGGTGAAA+GGG 0.506862 1_1:-23989563 Msa0014970:CDS
CTCGACACTCGAATGCCGTA+TGG 0.508684 1_1:-23988310 Msa0014970:CDS
ATGCTTGCGCGCTCTTGTGA+TGG 0.509880 1_1:+23987499 None:intergenic
TGTCATAGATGAAGCTGGAC+AGG 0.510157 1_1:-23989146 Msa0014970:CDS
TAGGTACGATCAAACACATT+GGG 0.510293 1_1:-23987563 Msa0014970:CDS
AATGCTGTTCCTATGCCACT+TGG 0.510987 1_1:-23992034 Msa0014970:CDS
ACAGTAGCATCAAAGTCCTT+GGG 0.511117 1_1:-23989433 Msa0014970:CDS
GGCTGATACACTTACCTATG+AGG 0.511446 1_1:-23990291 Msa0014970:intron
GCCATATTCGACACTTTGGT+AGG 0.513271 1_1:-23987415 Msa0014970:CDS
CAGAACTTCTCAATATTGAA+AGG 0.513339 1_1:-23990961 Msa0014970:CDS
TGTCCATTCCTAAAACTCCT+TGG 0.515753 1_1:+23991038 None:intergenic
AATGCCATCAGTACCTCTAC+AGG 0.516644 1_1:-23990797 Msa0014970:intron
ATGAGAAAAGACAGTCTTGG+AGG 0.517016 1_1:+23988874 None:intergenic
CCTATTGGTTGGAAAGATGT+TGG 0.517318 1_1:-23992208 Msa0014970:CDS
CCTCCCGGTACAGGCAAGAC+CGG 0.518071 1_1:-23989610 Msa0014970:CDS
AGGATTGGGAGGAATGCATC+TGG 0.522459 1_1:-23990555 Msa0014970:CDS
GTCTCATGTTACAATTATTG+TGG 0.524185 1_1:+23987119 None:intergenic
ATTGGCGTCAAACTCAGTCT+TGG 0.527994 1_1:-23991898 Msa0014970:CDS
TGGCTAACCAAGAACTCAAT+CGG 0.529869 1_1:+23990863 None:intergenic
AGAACTTCTCAATATTGAAA+GGG 0.529997 1_1:-23990960 Msa0014970:CDS
TTCTTGTTCATATTCTCAAA+GGG 0.531283 1_1:+23992259 None:intergenic
TTGCGAAGAGCATCTAGATC+AGG 0.532387 1_1:-23988272 Msa0014970:CDS
GACGGGGTTCCTGAAGCTGC+CGG 0.532397 1_1:-23987878 Msa0014970:CDS
CTCACACAAACCATTTCTCC+GGG 0.532657 1_1:+23990482 None:intergenic
CCGTATGGAAGTCTATCAAT+TGG 0.532960 1_1:-23988295 Msa0014970:CDS
ATGCGCCATATTCGACACTT+TGG 0.533794 1_1:-23987419 Msa0014970:CDS
TGGGCTTCGAAGGAGATGTA+TGG 0.534352 1_1:-23988911 Msa0014970:CDS
GTTACAACTTCTTGCATGCA+AGG 0.534893 1_1:-23990437 Msa0014970:CDS
GTTCAATTGCAGCTCAGCAC+AGG 0.536033 1_1:-23991096 Msa0014970:intron
TTTAGGAATGGACAGAGAAA+GGG 0.536782 1_1:-23991029 Msa0014970:CDS
GCGCCGTGGAACAAGGTGAA+AGG 0.540009 1_1:-23989564 Msa0014970:CDS
CTTCGAAGCCCAACTTGCAA+TGG 0.540846 1_1:+23988922 None:intergenic
GGTCCTTGGATAACCAATAG+TGG 0.541765 1_1:+23989631 None:intergenic
AAAGAGTGGTAGGTGGCAAT+CGG 0.542226 1_1:+23990507 None:intergenic
CTCAGCACAGGGCAGTTGCA+AGG 0.542941 1_1:-23991084 Msa0014970:CDS
GAGCTGCAACTCTGCATGAA+GGG 0.544095 1_1:-23988988 Msa0014970:CDS
GAGAATATAGGTGACCCTAT+TGG 0.545405 1_1:-23992223 Msa0014970:CDS
AGAGCTGCAACTCTGCATGA+AGG 0.548566 1_1:-23988989 Msa0014970:CDS
AAGATGAGAAAAGACAGTCT+TGG 0.548973 1_1:+23988871 None:intergenic
TGTTGAATTGGAGTTTACTC+AGG 0.549406 1_1:-23990936 Msa0014970:CDS
CCTATAAGCAATTGTTTGAG+GGG 0.551618 1_1:-23987273 Msa0014970:three_prime_UTR
AAACCGGTCTTGCCTGTACC+GGG 0.552229 1_1:+23989607 None:intergenic
ACAGGCTCGTTGTATAATGA+AGG 0.558434 1_1:-23988244 Msa0014970:CDS
TAGCTTTCGAATCATGGGAT+CGG 0.559505 1_1:+23989186 None:intergenic
ACGCCAACTTCTGAAACAGT+TGG 0.559556 1_1:-23989296 Msa0014970:CDS
ACTTCAAGACCAAGTGGCAT+AGG 0.563752 1_1:+23992025 None:intergenic
AGATCTAAGACAATGTTTGA+GGG 0.563780 1_1:-23989341 Msa0014970:CDS
CCACCTACCACTCTTTCACC+CGG 0.565373 1_1:-23990500 Msa0014970:CDS
TTGCAACTCTATTCGGCGAA+GGG 0.566204 1_1:-23989786 Msa0014970:CDS
GTTGCAACTCTATTCGGCGA+AGG 0.568653 1_1:-23989787 Msa0014970:CDS
ATAACATGCGCCGTGGAACA+AGG 0.575282 1_1:-23989571 Msa0014970:CDS
TTGGTTATCCAAGGACCTCC+CGG 0.575336 1_1:-23989625 Msa0014970:CDS
GATGGCATTTAAATTACAGA+TGG 0.575768 1_1:+23990811 None:intergenic
GAGGATGCTGTTGACAAAGA+AGG 0.575847 1_1:+23992641 None:intergenic
TCAAACACATTGGGAGCTGT+AGG 0.575959 1_1:-23987554 Msa0014970:CDS
ACCTTGAAAACTATCAATTG+TGG 0.580698 1_1:+23987844 None:intergenic
AATTGTGGAAACTTCAGTAC+CGG 0.581431 1_1:+23987859 None:intergenic
ATATAGGTGACCCTATTGGT+TGG 0.581563 1_1:-23992219 Msa0014970:CDS
TTGGTTGTCATAGATGAAGC+TGG 0.583914 1_1:-23989151 Msa0014970:CDS
GGGTCAAAGTGTTACAGCAA+AGG 0.584641 1_1:-23991009 Msa0014970:CDS
CGTTAGGTTTGAATAAGAAG+AGG 0.584662 1_1:-23989654 Msa0014970:CDS
CATTTCTCCGGGTGAAAGAG+TGG 0.585965 1_1:+23990493 None:intergenic
TTGCAATGGCATCATTCATA+CGG 0.586486 1_1:+23988936 None:intergenic
ACACAGCCTAAGAGTGTCCA+AGG 0.588984 1_1:-23991055 Msa0014970:CDS
TAATCCATAGAAGGTAACAT+TGG 0.591798 1_1:+23987338 None:intergenic
TATGGCGCATAAGTCTTGCT+AGG 0.591965 1_1:+23987432 None:intergenic
TGAATTGGAGTTTACTCAGG+AGG 0.593494 1_1:-23990933 Msa0014970:CDS
GCCTTTCTAGAAAATATCAC+AGG 0.593978 1_1:+23989046 None:intergenic
CCATATTCGACACTTTGGTA+GGG 0.594215 1_1:-23987414 Msa0014970:CDS
TGAATGATGCCATTGCAAGT+TGG 0.596245 1_1:-23988931 Msa0014970:CDS
TCTAGAAAGGCATTAGAAGG+TGG 0.596468 1_1:-23989034 Msa0014970:CDS
TTCAATTGCAGCTCAGCACA+GGG 0.597992 1_1:-23991095 Msa0014970:intron
TTATCAACAGCTGCATTGGT+AGG 0.599783 1_1:+23989526 None:intergenic
CACAAACAGCAATGAAACAA+AGG 0.600512 1_1:-23992350 Msa0014970:CDS
GGGCACTGTGTTATCCATGT+AGG 0.602151 1_1:+23988343 None:intergenic
GCGAAGGGGAAGATGCTGCA+TGG 0.603321 1_1:-23989771 Msa0014970:CDS
ACATCAACTTGCTTCTTCTG+TGG 0.603336 1_1:-23992505 Msa0014970:CDS
AATACCTGTAGAGGTACTGA+TGG 0.603865 1_1:+23990793 None:intergenic
AGTGGTTAAGTATATAAGCA+TGG 0.604206 1_1:+23992592 None:intergenic
GTGTCACATAGTTCTTGCTG+AGG 0.609780 1_1:+23990833 None:intergenic
AGTGTTATGCATGATACTAT+GGG 0.610221 1_1:-23987051 Msa0014970:three_prime_UTR
CGAGTGTCGAGCAGTAGCAG+AGG 0.610368 1_1:+23988322 None:intergenic
GAGTGGTAGGTGGCAATCGG+TGG 0.614362 1_1:+23990510 None:intergenic
TCTCCGGGTGAAAGAGTGGT+AGG 0.619341 1_1:+23990497 None:intergenic
AGGCCACTATTGGTTATCCA+AGG 0.620754 1_1:-23989634 Msa0014970:CDS
TGATTCTTCTGCTATCGCCA+AGG 0.623622 1_1:+23987528 None:intergenic
TGCAACTCTATTCGGCGAAG+GGG 0.630223 1_1:-23989785 Msa0014970:CDS
GTCTTGCTAGGAACGTGTTG+TGG 0.630547 1_1:+23987444 None:intergenic
TCTCTGCTGAGATTTATCAA+AGG 0.633256 1_1:+23989684 None:intergenic
AAGAACTCAATCGGTTTCGA+CGG 0.634115 1_1:+23990872 None:intergenic
GAGTGTCGAGCAGTAGCAGA+GGG 0.637423 1_1:+23988323 None:intergenic
TGTGAGAACATGTGACAGCA+AGG 0.642149 1_1:-23990465 Msa0014970:CDS
CCAATTGATAGACTTCCATA+CGG 0.644576 1_1:+23988295 None:intergenic
GCAAATAATAACATGCGCCG+TGG 0.645010 1_1:-23989578 Msa0014970:CDS
GTAAAAGAGAATACCTGTAG+AGG 0.649202 1_1:+23990784 None:intergenic
GAAGAGCATCTAGATCAGGC+TGG 0.650620 1_1:-23988268 Msa0014970:CDS
ATGGCGTGACTCTAAAGCAA+CGG 0.651052 1_1:+23990376 None:intergenic
CAAGTAACTTCAAGACCAAG+TGG 0.651955 1_1:+23992019 None:intergenic
ATAGGTACGATCAAACACAT+TGG 0.652032 1_1:-23987564 Msa0014970:intron
ATGAAGGGATTCTCACCACT+AGG 0.660150 1_1:-23988973 Msa0014970:CDS
AATATAGGAATCCAGCAAGA+CGG 0.662472 1_1:+23989115 None:intergenic
GCTTCGAAGGAGATGTATGG+AGG 0.667867 1_1:-23988908 Msa0014970:CDS
TGAATAACAAACGTAAGACC+TGG 0.668047 1_1:+23992073 None:intergenic
ATGAAACAAAGAATGGGACC+AGG 0.673070 1_1:-23992091 Msa0014970:CDS
GTGGAAAATCTAGGTGACGA+TGG 0.673584 1_1:-23990410 Msa0014970:CDS
GTATTGTGTCGTTAACCTAG+TGG 0.677271 1_1:+23988958 None:intergenic
GTTGCTTTAGAGTCACGCCA+TGG 0.679288 1_1:-23990374 Msa0014970:CDS
TTGAACTTGAGCAACATATG+GGG 0.689568 1_1:+23987919 None:intergenic
TTTGAGGGACATGCTTGACG+GGG 0.689897 1_1:-23987894 Msa0014970:CDS
TAGTGTTGCAAGTGTGACAG+TGG 0.691939 1_1:-23987317 Msa0014970:three_prime_UTR
CCGGGTGAAAGAGTGGTAGG+TGG 0.693784 1_1:+23990500 None:intergenic
GTGTTATGCATGATACTATG+GGG 0.698502 1_1:-23987050 Msa0014970:three_prime_UTR
CCGGTCTTGCCTGTACCGGG+AGG 0.700623 1_1:+23989610 None:intergenic
TAGAGAAAGTAGGATCACCA+TGG 0.723561 1_1:+23990357 None:intergenic
GTGAGAACATGTGACAGCAA+GGG 0.734905 1_1:-23990464 Msa0014970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GGATTTATATTTTTTTTTTT+GGG - chr1_1:23992431-23992450 Msa0014970:CDS 10.0%
!!! GATTTATATTTTTTTTTTTG+GGG - chr1_1:23992432-23992451 Msa0014970:CDS 10.0%
!!! ATTTATATTTTTTTTTTTGG+GGG - chr1_1:23992433-23992452 Msa0014970:CDS 10.0%
!!! TTTTAGATTTTTTTTGTTCA+TGG + chr1_1:23987067-23987086 None:intergenic 15.0%
!! TTTATTTGTTTATCTAAAGA+TGG - chr1_1:23988072-23988091 Msa0014970:intron 15.0%
!! TTCAAAGTAAAATAGAATTT+GGG + chr1_1:23988398-23988417 None:intergenic 15.0%
!! TTTCAAAGTAAAATAGAATT+TGG + chr1_1:23988399-23988418 None:intergenic 15.0%
!!! ACTTATTTTTATTAGATGAA+TGG - chr1_1:23991291-23991310 Msa0014970:intron 15.0%
!! TAAAAATATTTATCATCGTT+TGG - chr1_1:23992034-23992053 Msa0014970:CDS 15.0%
!!! GGGATTTATATTTTTTTTTT+TGG - chr1_1:23992430-23992449 Msa0014970:CDS 15.0%
!!! TTTATATTTTTTTTTTTGGG+GGG - chr1_1:23992434-23992453 Msa0014970:CDS 15.0%
!! TTCCAAAAAAAATTCAGTAA+TGG - chr1_1:23987150-23987169 Msa0014970:three_prime_UTR 20.0%
!!! TTCCATTACTGAATTTTTTT+TGG + chr1_1:23987155-23987174 None:intergenic 20.0%
!! ATAATCTCTAATAAGCTAAT+AGG + chr1_1:23987860-23987879 None:intergenic 20.0%
!! TACTAAAACAACATCAATAA+AGG - chr1_1:23988166-23988185 Msa0014970:intron 20.0%
!!! TTCACATCTTATATTTTTGT+TGG + chr1_1:23988505-23988524 None:intergenic 20.0%
!!! CATTTATGAACTTTTTAAAC+AGG - chr1_1:23989108-23989127 Msa0014970:CDS 20.0%
!!! TTATGTAAGTTGAAATTAAG+AGG - chr1_1:23989501-23989520 Msa0014970:CDS 20.0%
!! AAACTAAATTTATGCCAAAT+AGG + chr1_1:23989614-23989633 None:intergenic 20.0%
!! GAAAAATAATTAGCTCATAT+GGG + chr1_1:23989637-23989656 None:intergenic 20.0%
!! AGAAAAATAATTAGCTCATA+TGG + chr1_1:23989638-23989657 None:intergenic 20.0%
!!! CTTTTGTTATAGAAATAACT+TGG + chr1_1:23990973-23990992 None:intergenic 20.0%
!! TCAAATAAACCAATTCAAAT+AGG - chr1_1:23991135-23991154 Msa0014970:intron 20.0%
!! AAGTACATGTAGTATATATA+TGG + chr1_1:23991263-23991282 None:intergenic 20.0%
!! ATAATTACCAGCATAAATTA+AGG + chr1_1:23991497-23991516 None:intergenic 20.0%
!! AAAAGGAAAAACAAAGATAA+AGG + chr1_1:23991550-23991569 None:intergenic 20.0%
!!! ATGCAATAATTTCTTTTTCT+TGG + chr1_1:23991583-23991602 None:intergenic 20.0%
!!! GTTTCAACAAATTTTTTACT+TGG - chr1_1:23991923-23991942 Msa0014970:CDS 20.0%
!!! TACTTGGTGAAAAAATAAAA+TGG - chr1_1:23991939-23991958 Msa0014970:CDS 20.0%
!!! ACTTGGTGAAAAAATAAAAT+GGG - chr1_1:23991940-23991959 Msa0014970:CDS 20.0%
!!! TAGATTTTTTTTGTTCATGG+AGG + chr1_1:23987064-23987083 None:intergenic 25.0%
!!! CAGTTTTTGTTATTCAATAG+TGG + chr1_1:23987112-23987131 None:intergenic 25.0%
! TTCTTGTTCATATTCTCAAA+GGG + chr1_1:23987427-23987446 None:intergenic 25.0%
! ATTCTTGTTCATATTCTCAA+AGG + chr1_1:23987428-23987447 None:intergenic 25.0%
!!! TTCTGAAATGAAACAAAGAA+TGG - chr1_1:23987585-23987604 Msa0014970:intron 25.0%
!! TCTGAAATGAAACAAAGAAT+GGG - chr1_1:23987586-23987605 Msa0014970:intron 25.0%
! TGAAAATGATCAAAAAGAGT+AGG + chr1_1:23987712-23987731 None:intergenic 25.0%
! AATCACTTGTAAGATTGTTT+AGG - chr1_1:23987890-23987909 Msa0014970:CDS 25.0%
! AACAACATCAATAAAGGTTA+AGG - chr1_1:23988172-23988191 Msa0014970:intron 25.0%
!!! TTTTGAAAGATGTTACAAAG+TGG - chr1_1:23988253-23988272 Msa0014970:CDS 25.0%
!! TTACAAAGTGGTTTTTGATA+TGG - chr1_1:23988265-23988284 Msa0014970:CDS 25.0%
!! TGGTTTTTGATATGGATATA+AGG - chr1_1:23988273-23988292 Msa0014970:CDS 25.0%
!! TATGGATATAAGGATTTTCA+AGG - chr1_1:23988283-23988302 Msa0014970:CDS 25.0%
! AGAACTTCTCAATATTGAAA+GGG - chr1_1:23988723-23988742 Msa0014970:intron 25.0%
! TAATTATAAATGTGATCCAG+TGG - chr1_1:23988931-23988950 Msa0014970:CDS 25.0%
!!! CTTTTTAAGTTACACAGAAT+TGG + chr1_1:23989078-23989097 None:intergenic 25.0%
! AAGTTCATAAATGATCATAG+AGG + chr1_1:23989101-23989120 None:intergenic 25.0%
!! ATGAACTTTTTAAACAGGAT+TGG - chr1_1:23989113-23989132 Msa0014970:CDS 25.0%
!! TGAACTTTTTAAACAGGATT+GGG - chr1_1:23989114-23989133 Msa0014970:CDS 25.0%
!! ATTACAGCAACAAAATGTTT+TGG + chr1_1:23989453-23989472 None:intergenic 25.0%
! AATAGGTGAAGTTATATTGA+TGG + chr1_1:23989597-23989616 None:intergenic 25.0%
! TCAATATAACTTCACCTATT+TGG - chr1_1:23989597-23989616 Msa0014970:CDS 25.0%
! ATACGAACATGAATCTTATT+TGG + chr1_1:23989765-23989784 None:intergenic 25.0%
!! GAAAAAACAAATGGAGTATT+AGG - chr1_1:23989968-23989987 Msa0014970:intron 25.0%
! TATTATTTGCTTGAGTAAAC+CGG + chr1_1:23990095-23990114 None:intergenic 25.0%
! GAGTTTAATACCTTAACAAA+AGG + chr1_1:23990850-23990869 None:intergenic 25.0%
! TTTAGAGATGTAACTCAAAA+TGG - chr1_1:23991179-23991198 Msa0014970:intron 25.0%
!! GTATTTTCCTTAATTTATGC+TGG - chr1_1:23991487-23991506 Msa0014970:intron 25.0%
! TTCTTGGATCAAAGAATAAA+AGG + chr1_1:23991567-23991586 None:intergenic 25.0%
! AAGAAATTATTGCATTCCAT+TGG - chr1_1:23991588-23991607 Msa0014970:intron 25.0%
! AATTTCAGATTCAAATTGAC+AGG + chr1_1:23991711-23991730 None:intergenic 25.0%
!! TCAATTTGAATCTGAAATTC+AGG - chr1_1:23991712-23991731 Msa0014970:intron 25.0%
!! TGATGCTGTAATTTTATCAA+TGG - chr1_1:23991870-23991889 Msa0014970:CDS 25.0%
!!! TAAAAAATTTGTTGAAACCG+TGG + chr1_1:23991921-23991940 None:intergenic 25.0%
! AACAGAGAAAATCAAGTATA+GGG + chr1_1:23991983-23992002 None:intergenic 25.0%
! AAACAGAGAAAATCAAGTAT+AGG + chr1_1:23991984-23992003 None:intergenic 25.0%
! ATACTCATGCATGAAAATTA+TGG - chr1_1:23992531-23992550 Msa0014970:exon 25.0%
AGTGGTTAAGTATATAAGCA+TGG + chr1_1:23987094-23987113 None:intergenic 30.0%
!! AAGCTAGTTTGGATTTTGAT+GGG + chr1_1:23987210-23987229 None:intergenic 30.0%
ATAGGAACAGCATTCAAATA+AGG + chr1_1:23987643-23987662 None:intergenic 30.0%
TCAATAAAGGTTAAGGACTA+AGG - chr1_1:23988179-23988198 Msa0014970:intron 30.0%
TTAAGGACTAAGGATATGTT+TGG - chr1_1:23988189-23988208 Msa0014970:intron 30.0%
CAGAACTTCTCAATATTGAA+AGG - chr1_1:23988722-23988741 Msa0014970:intron 30.0%
TATTGAAAGGGATGTTGAAT+TGG - chr1_1:23988735-23988754 Msa0014970:intron 30.0%
GATGGCATTTAAATTACAGA+TGG + chr1_1:23988875-23988894 None:intergenic 30.0%
ATTAGAACATATACATCCAC+TGG + chr1_1:23988950-23988969 None:intergenic 30.0%
CCAAATAGTTTAGAGAAAGT+AGG + chr1_1:23989339-23989358 None:intergenic 30.0%
CCTACTTTCTCTAAACTATT+TGG - chr1_1:23989336-23989355 Msa0014970:CDS 30.0%
ACAATAATGATGAACAGAAG+CGG + chr1_1:23989560-23989579 None:intergenic 30.0%
CTTATTTGAACTGCAATACA+TGG + chr1_1:23989690-23989709 None:intergenic 30.0%
!!! ATTTTTCTGAAGCAGCATTA+GGG + chr1_1:23989843-23989862 None:intergenic 30.0%
AGAAGAATAGTTTGGTAGAT+TGG - chr1_1:23989939-23989958 Msa0014970:intron 30.0%
GAAGAATAGTTTGGTAGATT+GGG - chr1_1:23989940-23989959 Msa0014970:intron 30.0%
TGGGAAGAAGAAAAAACAAA+TGG - chr1_1:23989959-23989978 Msa0014970:intron 30.0%
GTTGAAAAGCTTTCAAATGT+TGG - chr1_1:23990184-23990203 Msa0014970:intron 30.0%
GGAATAAATATTGTTCGAGT+TGG - chr1_1:23990205-23990224 Msa0014970:intron 30.0%
!!! TACTGTTTTTGATATACGAG+CGG + chr1_1:23990236-23990255 None:intergenic 30.0%
! AAGATCTAAGACAATGTTTG+AGG - chr1_1:23990341-23990360 Msa0014970:CDS 30.0%
! AGATCTAAGACAATGTTTGA+GGG - chr1_1:23990342-23990361 Msa0014970:CDS 30.0%
!! AAAGCTAAATGCTTTTGACT+TGG - chr1_1:23990513-23990532 Msa0014970:CDS 30.0%
!! TCCTGTGATATTTTCTAGAA+AGG - chr1_1:23990636-23990655 Msa0014970:intron 30.0%
!!! TTTTCTAGAAAGGCATTAGA+AGG - chr1_1:23990646-23990665 Msa0014970:intron 30.0%
AGAGAATGGAGATATCAATT+AGG + chr1_1:23990872-23990891 None:intergenic 30.0%
AAGGCTTCTATTTACATCTT+AGG - chr1_1:23990902-23990921 Msa0014970:CDS 30.0%
! TTTTCATAAGCTATCTACGA+GGG - chr1_1:23991012-23991031 Msa0014970:CDS 30.0%
AAACAAGGACCTATTTGAAT+TGG + chr1_1:23991147-23991166 None:intergenic 30.0%
AAACTCCTCTAGTTAAAACA+AGG + chr1_1:23991162-23991181 None:intergenic 30.0%
! TCCATTGGATATTGTAGTTT+TGG - chr1_1:23991603-23991622 Msa0014970:intron 30.0%
TCCAAAACTACAATATCCAA+TGG + chr1_1:23991607-23991626 None:intergenic 30.0%
GAAAATTCTTATGTCAGCAA+AGG + chr1_1:23991689-23991708 None:intergenic 30.0%
ACTGAACTACAATAGCATTT+GGG + chr1_1:23991744-23991763 None:intergenic 30.0%
!! TCCACAATTGATAGTTTTCA+AGG - chr1_1:23991838-23991857 Msa0014970:intron 30.0%
ACCTTGAAAACTATCAATTG+TGG + chr1_1:23991842-23991861 None:intergenic 30.0%
!! CAATTGATAGTTTTCAAGGT+CGG - chr1_1:23991842-23991861 Msa0014970:intron 30.0%
!! AATTGATAGTTTTCAAGGTC+GGG - chr1_1:23991843-23991862 Msa0014970:intron 30.0%
TAATCCATAGAAGGTAACAT+TGG + chr1_1:23992348-23992367 None:intergenic 30.0%
GTCTCATGTTACAATTATTG+TGG + chr1_1:23992567-23992586 None:intergenic 30.0%
AAGTGTTATGCATGATACTA+TGG - chr1_1:23992631-23992650 Msa0014970:five_prime_UTR 30.0%
AGTGTTATGCATGATACTAT+GGG - chr1_1:23992632-23992651 Msa0014970:five_prime_UTR 30.0%
ATGGGGTAAAAATTGTTTGA+TGG - chr1_1:23992650-23992669 Msa0014970:five_prime_UTR 30.0%
!! GAAGCTAGTTTGGATTTTGA+TGG + chr1_1:23987211-23987230 None:intergenic 35.0%
TGAAGATGATGAAGCTAGTT+TGG + chr1_1:23987221-23987240 None:intergenic 35.0%
CTAGCTTCATCATCTTCATT+TGG - chr1_1:23987223-23987242 Msa0014970:three_prime_UTR 35.0%
!! TTGTGATGTTTTGGACTACA+CGG + chr1_1:23987318-23987337 None:intergenic 35.0%
!!! CATTGCTGTTTGTGATGTTT+TGG + chr1_1:23987327-23987346 None:intergenic 35.0%
CACAAACAGCAATGAAACAA+AGG - chr1_1:23987333-23987352 Msa0014970:exon 35.0%
! TCTCCTTCTTCTTCTTTTTG+TGG + chr1_1:23987368-23987387 None:intergenic 35.0%
CAACATCTTTCCAACCAATA+GGG + chr1_1:23987477-23987496 None:intergenic 35.0%
! TTGGAAAAAGTGTAGTGAGT+TGG - chr1_1:23987494-23987513 Msa0014970:CDS 35.0%
! ACGTGAGAGTATGAAATCTA+TGG - chr1_1:23987519-23987538 Msa0014970:CDS 35.0%
TGCTGAGTTACTTGAAGATT+TGG - chr1_1:23987558-23987577 Msa0014970:CDS 35.0%
TGAATAACAAACGTAAGACC+TGG + chr1_1:23987613-23987632 None:intergenic 35.0%
CTTCAAGATATGCAGAGTAA+AGG - chr1_1:23987751-23987770 Msa0014970:intron 35.0%
AGATATGCAGAGTAAAGGTT+TGG - chr1_1:23987756-23987775 Msa0014970:intron 35.0%
! GTAAAGGTTTGGTTGAAGAT+TGG - chr1_1:23987767-23987786 Msa0014970:intron 35.0%
TCAGTCTTGGAAATTGCTTA+AGG - chr1_1:23987798-23987817 Msa0014970:intron 35.0%
! ATGTCAAAGTGCTCAAAAAC+TGG + chr1_1:23988428-23988447 None:intergenic 35.0%
!! TTTTAGGAATGGACAGAGAA+AGG - chr1_1:23988653-23988672 Msa0014970:intron 35.0%
TTTAGGAATGGACAGAGAAA+GGG - chr1_1:23988654-23988673 Msa0014970:intron 35.0%
!! GAGAAGTTCTGACATGTTTT+GGG + chr1_1:23988713-23988732 None:intergenic 35.0%
!! TGAGAAGTTCTGACATGTTT+TGG + chr1_1:23988714-23988733 None:intergenic 35.0%
TGTTGAATTGGAGTTTACTC+AGG - chr1_1:23988747-23988766 Msa0014970:intron 35.0%
GTAAAAGAGAATACCTGTAG+AGG + chr1_1:23988902-23988921 None:intergenic 35.0%
! ACTTTTTAAACAGGATTGGG+AGG - chr1_1:23989117-23989136 Msa0014970:CDS 35.0%
!! CTGGTGTTATTCAAGATTGA+AGG - chr1_1:23989147-23989166 Msa0014970:CDS 35.0%
CATTGATCGTATTCAAGGAT+TGG - chr1_1:23989371-23989390 Msa0014970:CDS 35.0%
GATAGAAATCAGTACCTCAT+AGG + chr1_1:23989409-23989428 None:intergenic 35.0%
! AGGTTTTCTCTAGTCAAATG+AGG - chr1_1:23989521-23989540 Msa0014970:CDS 35.0%
! GGTTTTCTCTAGTCAAATGA+GGG - chr1_1:23989522-23989541 Msa0014970:CDS 35.0%
!!! CATTTTTCTGAAGCAGCATT+AGG + chr1_1:23989844-23989863 None:intergenic 35.0%
! CTAATGCTGCTTCAGAAAAA+TGG - chr1_1:23989842-23989861 Msa0014970:CDS 35.0%
GTTGCAACAACAGAAATTGA+TGG + chr1_1:23989884-23989903 None:intergenic 35.0%
TCTGTTGTTGCAACTCTATT+CGG - chr1_1:23989890-23989909 Msa0014970:intron 35.0%
ATGGCTTGAGAAGAATAGTT+TGG - chr1_1:23989931-23989950 Msa0014970:intron 35.0%
TCTCTGCTGAGATTTATCAA+AGG + chr1_1:23990002-23990021 None:intergenic 35.0%
CGTTAGGTTTGAATAAGAAG+AGG - chr1_1:23990029-23990048 Msa0014970:intron 35.0%
CATATTATCAACAGCTGCAT+TGG + chr1_1:23990164-23990183 None:intergenic 35.0%
!! CAATGCAGCTGTTGATAATA+TGG - chr1_1:23990162-23990181 Msa0014970:intron 35.0%
!!! ACTGTTTTTGATATACGAGC+GGG + chr1_1:23990235-23990254 None:intergenic 35.0%
AGAGGAAGAAATCTGATCTA+AGG - chr1_1:23990317-23990336 Msa0014970:CDS 35.0%
!! GCATTTAGCTTTCGAATCAT+GGG + chr1_1:23990505-23990524 None:intergenic 35.0%
!! AGCATTTAGCTTTCGAATCA+TGG + chr1_1:23990506-23990525 None:intergenic 35.0%
AATATAGGAATCCAGCAAGA+CGG + chr1_1:23990571-23990590 None:intergenic 35.0%
AAAATATCACAGGAGCTAGT+TGG + chr1_1:23990630-23990649 None:intergenic 35.0%
! GCCTTTCTAGAAAATATCAC+AGG + chr1_1:23990640-23990659 None:intergenic 35.0%
TTGCAATGGCATCATTCATA+CGG + chr1_1:23990750-23990769 None:intergenic 35.0%
AAGATGAGAAAAGACAGTCT+TGG + chr1_1:23990815-23990834 None:intergenic 35.0%
! TGTCTTTTCTCATCTTCTTG+TGG - chr1_1:23990819-23990838 Msa0014970:CDS 35.0%
!! TTTACATCTTAGGCCTTGTT+TGG - chr1_1:23990912-23990931 Msa0014970:CDS 35.0%
TTAAGCTGCTTATCCAAACA+AGG + chr1_1:23990928-23990947 None:intergenic 35.0%
! GTTTTCATAAGCTATCTACG+AGG - chr1_1:23991011-23991030 Msa0014970:CDS 35.0%
!!! TAGGTCCTTGTTTTAACTAG+AGG - chr1_1:23991154-23991173 Msa0014970:intron 35.0%
CCAATTGATAGACTTCCATA+CGG + chr1_1:23991391-23991410 None:intergenic 35.0%
GACTGAACTACAATAGCATT+TGG + chr1_1:23991745-23991764 None:intergenic 35.0%
TTGAACTTGAGCAACATATG+GGG + chr1_1:23991767-23991786 None:intergenic 35.0%
GTTGAACTTGAGCAACATAT+GGG + chr1_1:23991768-23991787 None:intergenic 35.0%
AGTTGAACTTGAGCAACATA+TGG + chr1_1:23991769-23991788 None:intergenic 35.0%
! TTGCTCAAGTTCAACTTTTG+AGG - chr1_1:23991773-23991792 Msa0014970:intron 35.0%
! TGCTCAAGTTCAACTTTTGA+GGG - chr1_1:23991774-23991793 Msa0014970:intron 35.0%
AATTGTGGAAACTTCAGTAC+CGG + chr1_1:23991827-23991846 None:intergenic 35.0%
TGCTCGTGAACTAACATAAT+TGG - chr1_1:23992060-23992079 Msa0014970:CDS 35.0%
ATAGGTACGATCAAACACAT+TGG - chr1_1:23992119-23992138 Msa0014970:CDS 35.0%
TAGGTACGATCAAACACATT+GGG - chr1_1:23992120-23992139 Msa0014970:CDS 35.0%
GAATCCAATGTTACCTTCTA+TGG - chr1_1:23992341-23992360 Msa0014970:CDS 35.0%
TTGCAACACTAATCCATAGA+AGG + chr1_1:23992357-23992376 None:intergenic 35.0%
TGCCTATAAGCAATTGTTTG+AGG - chr1_1:23992408-23992427 Msa0014970:CDS 35.0%
GCCTATAAGCAATTGTTTGA+GGG - chr1_1:23992409-23992428 Msa0014970:CDS 35.0%
CCTATAAGCAATTGTTTGAG+GGG - chr1_1:23992410-23992429 Msa0014970:CDS 35.0%
ATGCATAACACTTGCATCTA+TGG + chr1_1:23992624-23992643 None:intergenic 35.0%
GTGTTATGCATGATACTATG+GGG - chr1_1:23992633-23992652 Msa0014970:five_prime_UTR 35.0%
! ACATCAACTTGCTTCTTCTG+TGG - chr1_1:23987178-23987197 Msa0014970:three_prime_UTR 40.0%
! CTTCTTCTTTTTGTGGTGCT+TGG + chr1_1:23987361-23987380 None:intergenic 40.0%
GCACCACAAAAAGAAGAAGA+AGG - chr1_1:23987362-23987381 Msa0014970:CDS 40.0%
CTTCTCGTGCATGAGAATAT+AGG - chr1_1:23987448-23987467 Msa0014970:CDS 40.0%
GAGAATATAGGTGACCCTAT+TGG - chr1_1:23987460-23987479 Msa0014970:CDS 40.0%
ATATAGGTGACCCTATTGGT+TGG - chr1_1:23987464-23987483 Msa0014970:CDS 40.0%
CCAACATCTTTCCAACCAAT+AGG + chr1_1:23987478-23987497 None:intergenic 40.0%
! CCTATTGGTTGGAAAGATGT+TGG - chr1_1:23987475-23987494 Msa0014970:CDS 40.0%
ATGAAACAAAGAATGGGACC+AGG - chr1_1:23987592-23987611 Msa0014970:intron 40.0%
CAAGTAACTTCAAGACCAAG+TGG + chr1_1:23987667-23987686 None:intergenic 40.0%
CTTAAGGAGCTTGCAAATTC+AGG - chr1_1:23987814-23987833 Msa0014970:CDS 40.0%
ATTGAAGAGGGCAAACGAAT+AGG + chr1_1:23988365-23988384 None:intergenic 40.0%
GGTTTGAATGCGATTGAAGA+GGG + chr1_1:23988377-23988396 None:intergenic 40.0%
CATCGCGATAAGATTGAGAA+TGG - chr1_1:23988565-23988584 Msa0014970:intron 40.0%
AAAACTCCTTGGACACTCTT+AGG + chr1_1:23988637-23988656 None:intergenic 40.0%
!!! AAGAGTGTCCAAGGAGTTTT+AGG - chr1_1:23988637-23988656 Msa0014970:intron 40.0%
!!! TGTCCAAGGAGTTTTAGGAA+TGG - chr1_1:23988642-23988661 Msa0014970:intron 40.0%
TGTCCATTCCTAAAACTCCT+TGG + chr1_1:23988648-23988667 None:intergenic 40.0%
TGAATTGGAGTTTACTCAGG+AGG - chr1_1:23988750-23988769 Msa0014970:intron 40.0%
!! TCGGAAGCATCATCTTGTTT+AGG + chr1_1:23988790-23988809 None:intergenic 40.0%
! AAGAACTCAATCGGTTTCGA+CGG + chr1_1:23988814-23988833 None:intergenic 40.0%
TGGCTAACCAAGAACTCAAT+CGG + chr1_1:23988823-23988842 None:intergenic 40.0%
!! AATACCTGTAGAGGTACTGA+TGG + chr1_1:23988893-23988912 None:intergenic 40.0%
TCTCACACAAACCATTTCTC+CGG + chr1_1:23989205-23989224 None:intergenic 40.0%
GTTACAACTTCTTGCATGCA+AGG - chr1_1:23989246-23989265 Msa0014970:CDS 40.0%
CAAGGAGTTGTGGAAAATCT+AGG - chr1_1:23989264-23989283 Msa0014970:CDS 40.0%
TAGAGAAAGTAGGATCACCA+TGG + chr1_1:23989329-23989348 None:intergenic 40.0%
GAATAAGAAGAGGCCACTAT+TGG - chr1_1:23990039-23990058 Msa0014970:intron 40.0%
! TTATCAACAGCTGCATTGGT+AGG + chr1_1:23990160-23990179 None:intergenic 40.0%
AACAGTAGCATCAAAGTCCT+TGG - chr1_1:23990249-23990268 Msa0014970:intron 40.0%
ACAGTAGCATCAAAGTCCTT+GGG - chr1_1:23990250-23990269 Msa0014970:intron 40.0%
CGCATTTACAATTTCTCCCA+AGG + chr1_1:23990269-23990288 None:intergenic 40.0%
TTCCCAACTGTTTCAGAAGT+TGG + chr1_1:23990393-23990412 None:intergenic 40.0%
GGGAAAGTCGCTAAAGAAAA+AGG - chr1_1:23990408-23990427 Msa0014970:CDS 40.0%
TGAAGTTCTATCTAGTGCTC+AGG - chr1_1:23990447-23990466 Msa0014970:CDS 40.0%
TAGCTTTCGAATCATGGGAT+CGG + chr1_1:23990500-23990519 None:intergenic 40.0%
TTGGTTGTCATAGATGAAGC+TGG - chr1_1:23990532-23990551 Msa0014970:CDS 40.0%
TTGCTGGATTCCTATATTGC+AGG - chr1_1:23990573-23990592 Msa0014970:intron 40.0%
!! TCTAGAAAGGCATTAGAAGG+TGG - chr1_1:23990649-23990668 Msa0014970:intron 40.0%
! AAGGCATTAGAAGGTGGTTT+AGG - chr1_1:23990655-23990674 Msa0014970:intron 40.0%
! GTATTGTGTCGTTAACCTAG+TGG + chr1_1:23990728-23990747 None:intergenic 40.0%
TGAATGATGCCATTGCAAGT+TGG - chr1_1:23990752-23990771 Msa0014970:intron 40.0%
GAATGATGCCATTGCAAGTT+GGG - chr1_1:23990753-23990772 Msa0014970:intron 40.0%
ATGAGAAAAGACAGTCTTGG+AGG + chr1_1:23990812-23990831 None:intergenic 40.0%
! TGTGGACTCTCCTTTTGTTA+AGG - chr1_1:23990837-23990856 Msa0014970:CDS 40.0%
TAAGCACTTGTGAGACTGTT+CGG + chr1_1:23991100-23991119 None:intergenic 40.0%
CCGTATGGAAGTCTATCAAT+TGG - chr1_1:23991388-23991407 Msa0014970:intron 40.0%
ACAGGCTCGTTGTATAATGA+AGG - chr1_1:23991439-23991458 Msa0014970:intron 40.0%
GAATCCAAACTCTACAACCA+CGG - chr1_1:23991901-23991920 Msa0014970:CDS 40.0%
CCATATTCGACACTTTGGTA+GGG - chr1_1:23992269-23992288 Msa0014970:CDS 40.0%
! CACGTAGAACCAGATAGTTT+TGG - chr1_1:23992297-23992316 Msa0014970:CDS 40.0%
!!! GTAGAACCAGATAGTTTTGG+AGG - chr1_1:23992300-23992319 Msa0014970:CDS 40.0%
!!! AACCAGATAGTTTTGGAGGA+GGG - chr1_1:23992304-23992323 Msa0014970:CDS 40.0%
CCCCTCAAACAATTGCTTAT+AGG + chr1_1:23992413-23992432 None:intergenic 40.0%
!! TTTGGGGGGTATTCATAAAC+TGG - chr1_1:23992448-23992467 Msa0014970:CDS 40.0%
GAGGATGCTGTTGACAAAGA+AGG + chr1_1:23987045-23987064 None:intergenic 45.0%
AATGCTGTTCCTATGCCACT+TGG - chr1_1:23987649-23987668 Msa0014970:intron 45.0%
ACTTCAAGACCAAGTGGCAT+AGG + chr1_1:23987661-23987680 None:intergenic 45.0%
ATTGGCGTCAAACTCAGTCT+TGG - chr1_1:23987785-23987804 Msa0014970:intron 45.0%
GGGTTTGAATGCGATTGAAG+AGG + chr1_1:23988378-23988397 None:intergenic 45.0%
TTCAATTGCAGCTCAGCACA+GGG - chr1_1:23988588-23988607 Msa0014970:intron 45.0%
! GGGTCAAAGTGTTACAGCAA+AGG - chr1_1:23988674-23988693 Msa0014970:intron 45.0%
GTCGAAACCGATTGAGTTCT+TGG - chr1_1:23988813-23988832 Msa0014970:intron 45.0%
GTGTCACATAGTTCTTGCTG+AGG + chr1_1:23988853-23988872 None:intergenic 45.0%
AATGCCATCAGTACCTCTAC+AGG - chr1_1:23988886-23988905 Msa0014970:CDS 45.0%
AAAGAGTGGTAGGTGGCAAT+CGG + chr1_1:23989179-23989198 None:intergenic 45.0%
CTCACACAAACCATTTCTCC+GGG + chr1_1:23989204-23989223 None:intergenic 45.0%
TGTGAGAACATGTGACAGCA+AGG - chr1_1:23989218-23989237 Msa0014970:CDS 45.0%
GTGAGAACATGTGACAGCAA+GGG - chr1_1:23989219-23989238 Msa0014970:CDS 45.0%
TTCTTGCATGCAAGGAGTTG+TGG - chr1_1:23989254-23989273 Msa0014970:CDS 45.0%
GTGGAAAATCTAGGTGACGA+TGG - chr1_1:23989273-23989292 Msa0014970:CDS 45.0%
!! ATGGCGTGACTCTAAAGCAA+CGG + chr1_1:23989310-23989329 None:intergenic 45.0%
! GTGCGCATTGATCGTATTCA+AGG - chr1_1:23989366-23989385 Msa0014970:CDS 45.0%
GGCTGATACACTTACCTATG+AGG - chr1_1:23989392-23989411 Msa0014970:CDS 45.0%
ATGATGAACAGAAGCGGCAA+GGG + chr1_1:23989554-23989573 None:intergenic 45.0%
AATGATGAACAGAAGCGGCA+AGG + chr1_1:23989555-23989574 None:intergenic 45.0%
TTGCAACTCTATTCGGCGAA+GGG - chr1_1:23989897-23989916 Msa0014970:intron 45.0%
! AGGCCACTATTGGTTATCCA+AGG - chr1_1:23990049-23990068 Msa0014970:intron 45.0%
GGTCCTTGGATAACCAATAG+TGG + chr1_1:23990055-23990074 None:intergenic 45.0%
GCAAATAATAACATGCGCCG+TGG - chr1_1:23990105-23990124 Msa0014970:intron 45.0%
AACCCTTTCACCTTGTTCCA+CGG + chr1_1:23990125-23990144 None:intergenic 45.0%
AGGGATGATTCATTAGCTGC+AGG - chr1_1:23990361-23990380 Msa0014970:CDS 45.0%
!! ACGCCAACTTCTGAAACAGT+TGG - chr1_1:23990387-23990406 Msa0014970:CDS 45.0%
!! CGCCAACTTCTGAAACAGTT+GGG - chr1_1:23990388-23990407 Msa0014970:CDS 45.0%
TGTCATAGATGAAGCTGGAC+AGG - chr1_1:23990537-23990556 Msa0014970:CDS 45.0%
ATGAAGGGATTCTCACCACT+AGG - chr1_1:23990710-23990729 Msa0014970:intron 45.0%
CCTTCACTTCACACAGAGAA+TGG + chr1_1:23990886-23990905 None:intergenic 45.0%
CCATTCTCTGTGTGAAGTGA+AGG - chr1_1:23990883-23990902 Msa0014970:CDS 45.0%
ATAAGCTATCTACGAGGGCT+TGG - chr1_1:23991017-23991036 Msa0014970:CDS 45.0%
TAAGCTATCTACGAGGGCTT+GGG - chr1_1:23991018-23991037 Msa0014970:CDS 45.0%
TGTAGGCTGCAACAACATCA+AGG + chr1_1:23991326-23991345 None:intergenic 45.0%
TGATGTTGTTGCAGCCTACA+TGG - chr1_1:23991326-23991345 Msa0014970:intron 45.0%
!! TTGCGAAGAGCATCTAGATC+AGG - chr1_1:23991411-23991430 Msa0014970:intron 45.0%
!! CTTTTGAGGGACATGCTTGA+CGG - chr1_1:23991787-23991806 Msa0014970:intron 45.0%
!! TTTTGAGGGACATGCTTGAC+GGG - chr1_1:23991788-23991807 Msa0014970:intron 45.0%
GAAACCGTGGTTGTAGAGTT+TGG + chr1_1:23991908-23991927 None:intergenic 45.0%
TCAAACACATTGGGAGCTGT+AGG - chr1_1:23992129-23992148 Msa0014970:CDS 45.0%
TGATTCTTCTGCTATCGCCA+AGG + chr1_1:23992158-23992177 None:intergenic 45.0%
TATGGCGCATAAGTCTTGCT+AGG + chr1_1:23992254-23992273 None:intergenic 45.0%
ATGCGCCATATTCGACACTT+TGG - chr1_1:23992264-23992283 Msa0014970:CDS 45.0%
GCCATATTCGACACTTTGGT+AGG - chr1_1:23992268-23992287 Msa0014970:CDS 45.0%
!! CCCTACCAAAGTGTCGAATA+TGG + chr1_1:23992272-23992291 None:intergenic 45.0%
!!! GAACCAGATAGTTTTGGAGG+AGG - chr1_1:23992303-23992322 Msa0014970:CDS 45.0%
AACCCTCCTCCAAAACTATC+TGG + chr1_1:23992309-23992328 None:intergenic 45.0%
!!! GATAGTTTTGGAGGAGGGTT+TGG - chr1_1:23992309-23992328 Msa0014970:CDS 45.0%
TAGTGTTGCAAGTGTGACAG+TGG - chr1_1:23992366-23992385 Msa0014970:CDS 45.0%
!! TTCAAAAAATATAATAAAAT+AGG - chr1_1:23992101-23992120 Msa0014970:CDS 5.0%
GTTCAATTGCAGCTCAGCAC+AGG - chr1_1:23988587-23988606 Msa0014970:intron 50.0%
!! ACACAGCCTAAGAGTGTCCA+AGG - chr1_1:23988628-23988647 Msa0014970:intron 50.0%
! CTCAATCGGTTTCGACGGAT+CGG + chr1_1:23988809-23988828 None:intergenic 50.0%
CACATAGTTCTTGCTGAGGC+TGG + chr1_1:23988849-23988868 None:intergenic 50.0%
AGGATTGGGAGGAATGCATC+TGG - chr1_1:23989128-23989147 Msa0014970:CDS 50.0%
CATTTCTCCGGGTGAAAGAG+TGG + chr1_1:23989193-23989212 None:intergenic 50.0%
CACTCTTTCACCCGGAGAAA+TGG - chr1_1:23989191-23989210 Msa0014970:CDS 50.0%
!! GTTGCTTTAGAGTCACGCCA+TGG - chr1_1:23989309-23989328 Msa0014970:CDS 50.0%
GTTGCAACTCTATTCGGCGA+AGG - chr1_1:23989896-23989915 Msa0014970:intron 50.0%
TGCAACTCTATTCGGCGAAG+GGG - chr1_1:23989898-23989917 Msa0014970:intron 50.0%
CAGCAGAGAGCAATTGCGTT+AGG - chr1_1:23990013-23990032 Msa0014970:intron 50.0%
TTGGTTATCCAAGGACCTCC+CGG - chr1_1:23990058-23990077 Msa0014970:intron 50.0%
TAAACCGGTCTTGCCTGTAC+CGG + chr1_1:23990080-23990099 None:intergenic 50.0%
ATAACATGCGCCGTGGAACA+AGG - chr1_1:23990112-23990131 Msa0014970:intron 50.0%
!! GTTTTCGCGAAGAGTGTGAG+AGG - chr1_1:23990299-23990318 Msa0014970:CDS 50.0%
GTTGTGCTTGCCACCAATAC+CGG - chr1_1:23990469-23990488 Msa0014970:CDS 50.0%
AGGCAATTGAACCGTCTTGC+TGG - chr1_1:23990557-23990576 Msa0014970:intron 50.0%
CAGCGTTTCGCCTGCAATAT+AGG + chr1_1:23990586-23990605 None:intergenic 50.0%
AGAGCTGCAACTCTGCATGA+AGG - chr1_1:23990694-23990713 Msa0014970:intron 50.0%
GAGCTGCAACTCTGCATGAA+GGG - chr1_1:23990695-23990714 Msa0014970:intron 50.0%
CTTCGAAGCCCAACTTGCAA+TGG + chr1_1:23990764-23990783 None:intergenic 50.0%
! CATTGCAAGTTGGGCTTCGA+AGG - chr1_1:23990762-23990781 Msa0014970:intron 50.0%
TGGGCTTCGAAGGAGATGTA+TGG - chr1_1:23990772-23990791 Msa0014970:intron 50.0%
GCTTCGAAGGAGATGTATGG+AGG - chr1_1:23990775-23990794 Msa0014970:intron 50.0%
AAGCTATCTACGAGGGCTTG+GGG - chr1_1:23991019-23991038 Msa0014970:CDS 50.0%
! GGGCACTGTGTTATCCATGT+AGG + chr1_1:23991343-23991362 None:intergenic 50.0%
!! GAAGAGCATCTAGATCAGGC+TGG - chr1_1:23991415-23991434 Msa0014970:intron 50.0%
CATCTAGATCAGGCTGGAAC+AGG - chr1_1:23991421-23991440 Msa0014970:intron 50.0%
TTTGAGGGACATGCTTGACG+GGG - chr1_1:23991789-23991808 Msa0014970:intron 50.0%
TTGGGAGCTGTAGGATTCCT+TGG - chr1_1:23992138-23992157 Msa0014970:CDS 50.0%
GTCTTGCTAGGAACGTGTTG+TGG + chr1_1:23992242-23992261 None:intergenic 50.0%
TTTGGAGGAGGGTTTGGACT+TGG - chr1_1:23992315-23992334 Msa0014970:CDS 50.0%
! GTTCTTGCTGAGGCTGGCTA+TGG + chr1_1:23988843-23988862 None:intergenic 55.0%
CCACCTACCACTCTTTCACC+CGG - chr1_1:23989183-23989202 Msa0014970:CDS 55.0%
TCTCCGGGTGAAAGAGTGGT+AGG + chr1_1:23989189-23989208 None:intergenic 55.0%
TTAGGGCTTCACAGTTGCGC+TGG + chr1_1:23989826-23989845 None:intergenic 55.0%
AAACCGGTCTTGCCTGTACC+GGG + chr1_1:23990079-23990098 None:intergenic 55.0%
CGCCGTGGAACAAGGTGAAA+GGG - chr1_1:23990120-23990139 Msa0014970:intron 55.0%
AATCATGGGATCGGCTGCTC+CGG + chr1_1:23990491-23990510 None:intergenic 55.0%
GCGAAACGCTGCATTCTTGC+TGG - chr1_1:23990595-23990614 Msa0014970:intron 55.0%
!! GAGTGTCGAGCAGTAGCAGA+GGG + chr1_1:23991363-23991382 None:intergenic 55.0%
CTCGACACTCGAATGCCGTA+TGG - chr1_1:23991373-23991392 Msa0014970:intron 55.0%
!! ACTTCAGTACCGGCAGCTTC+AGG + chr1_1:23991817-23991836 None:intergenic 55.0%
ATGCTTGCGCGCTCTTGTGA+TGG + chr1_1:23992187-23992206 None:intergenic 55.0%
CTCAGCACAGGGCAGTTGCA+AGG - chr1_1:23988599-23988618 Msa0014970:intron 60.0%
GAGTGGTAGGTGGCAATCGG+TGG + chr1_1:23989176-23989195 None:intergenic 60.0%
CCGGGTGAAAGAGTGGTAGG+TGG + chr1_1:23989186-23989205 None:intergenic 60.0%
GCGAAGGGGAAGATGCTGCA+TGG - chr1_1:23989912-23989931 Msa0014970:intron 60.0%
ATCCAAGGACCTCCCGGTAC+AGG - chr1_1:23990064-23990083 Msa0014970:intron 60.0%
GCGCCGTGGAACAAGGTGAA+AGG - chr1_1:23990119-23990138 Msa0014970:intron 60.0%
! ATCGGCTGCTCCGGTATTGG+TGG + chr1_1:23990482-23990501 None:intergenic 60.0%
!! CGAGTGTCGAGCAGTAGCAG+AGG + chr1_1:23991364-23991383 None:intergenic 60.0%
TGCCTGTACCGGGAGGTCCT+TGG + chr1_1:23990069-23990088 None:intergenic 65.0%
CCTCCCGGTACAGGCAAGAC+CGG - chr1_1:23990073-23990092 Msa0014970:intron 65.0%
GGGATCGGCTGCTCCGGTAT+TGG + chr1_1:23990485-23990504 None:intergenic 65.0%
GACGGGGTTCCTGAAGCTGC+CGG - chr1_1:23991805-23991824 Msa0014970:intron 65.0%
CCGGTCTTGCCTGTACCGGG+AGG + chr1_1:23990076-23990095 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 23987013 23992692 23987013 ID=Msa0014970;Name=Msa0014970
chr1_1 mRNA 23987013 23992692 23987013 ID=Msa0014970-mRNA-1;Parent=Msa0014970;Name=Msa0014970-mRNA-1;_AED=0.04;_eAED=0.04;_QI=156|1|1|1|1|1|7|324|954
chr1_1 exon 23987013 23987582 23987013 ID=Msa0014970-mRNA-1:exon:8324;Parent=Msa0014970-mRNA-1
chr1_1 exon 23987814 23987971 23987814 ID=Msa0014970-mRNA-1:exon:8323;Parent=Msa0014970-mRNA-1
chr1_1 exon 23988197 23988365 23988197 ID=Msa0014970-mRNA-1:exon:8322;Parent=Msa0014970-mRNA-1
chr1_1 exon 23988847 23989878 23988847 ID=Msa0014970-mRNA-1:exon:8321;Parent=Msa0014970-mRNA-1
chr1_1 exon 23990292 23990575 23990292 ID=Msa0014970-mRNA-1:exon:8320;Parent=Msa0014970-mRNA-1
chr1_1 exon 23990798 23991106 23990798 ID=Msa0014970-mRNA-1:exon:8319;Parent=Msa0014970-mRNA-1
chr1_1 exon 23991870 23992692 23991870 ID=Msa0014970-mRNA-1:exon:8318;Parent=Msa0014970-mRNA-1
chr1_1 five_prime_UTR 23992537 23992692 23992537 ID=Msa0014970-mRNA-1:five_prime_utr;Parent=Msa0014970-mRNA-1
chr1_1 CDS 23991870 23992536 23991870 ID=Msa0014970-mRNA-1:cds;Parent=Msa0014970-mRNA-1
chr1_1 CDS 23990798 23991106 23990798 ID=Msa0014970-mRNA-1:cds;Parent=Msa0014970-mRNA-1
chr1_1 CDS 23990292 23990575 23990292 ID=Msa0014970-mRNA-1:cds;Parent=Msa0014970-mRNA-1
chr1_1 CDS 23988847 23989878 23988847 ID=Msa0014970-mRNA-1:cds;Parent=Msa0014970-mRNA-1
chr1_1 CDS 23988197 23988365 23988197 ID=Msa0014970-mRNA-1:cds;Parent=Msa0014970-mRNA-1
chr1_1 CDS 23987814 23987971 23987814 ID=Msa0014970-mRNA-1:cds;Parent=Msa0014970-mRNA-1
chr1_1 CDS 23987337 23987582 23987337 ID=Msa0014970-mRNA-1:cds;Parent=Msa0014970-mRNA-1
chr1_1 three_prime_UTR 23987013 23987336 23987013 ID=Msa0014970-mRNA-1:three_prime_utr;Parent=Msa0014970-mRNA-1
Gene Sequence

>Msa0014970

ATGGAAGCAACATCAACTTGCTTCTTCTGTGGTAGAATCCCATCAAAATCCAAACTAGCTTCATCATCTTCATTTGGATCATTTTGTTTATTAACACGCAACAATGTTACTACAATCATGTGCAAAACATCATTGAAAACACACAACCGTGTAGTCCAAAACATCACAAACAGCAATGAAACAAAGGCTCCAAGCACCACAAAAAGAAGAAGAAGGAGAAGAAAAAACGATGCAGCAGCAATAGAAATTCAACTACCCTTTGAGAATATGAACAAGAATCTTCTCGTGCATGAGAATATAGGTGACCCTATTGGTTGGAAAGATGTTGGAAAAAGTGTAGTGAGTTGGATACGTGAGAGTATGAAATCTATGGCTTTTGAGATTGCTTCTGCTGAGTTACTTGAAGATTTGGAGTTTTCTGAAATGAAACAAAGAATGGGACCAGGTCTTACGTTTGTTATTCAAGCACAACCTTATTTGAATGCTGTTCCTATGCCACTTGGTCTTGAAGTTACTTGTTTGAAAGCATGTACTCATTATCCTACTCTTTTTGATCATTTTCAAAGAGAGTTGCGTGATGTTCTTCAAGATATGCAGAGTAAAGGTTTGGTTGAAGATTGGCGTCAAACTCAGTCTTGGAAATTGCTTAAGGAGCTTGCAAATTCAGCTCAGCACAGGGCAGTTGCAAGGAATGTAACACAGCCTAAGAGTGTCCAAGGAGTTTTAGGAATGGACAGAGAAAGGGTCAAAGTGTTACAGCAAAGGATCGATGAATTCACCCAAAACATGTCAGAACTTCTCAATATTGAAAGGGATGTTGAATTGGAGTTTACTCAGGAGGAATTAGATGCTGTTCCTAAACAAGATGATGCTTCCGATCCGTCGAAACCGATTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAACTATGTGACACCATCTGTAATTTAAATGCCATCAGTACCTCTACAGGATTGGGAGGAATGCATCTGGTGTTATTCAAGATTGAAGGAAACCACCGATTGCCACCTACCACTCTTTCACCCGGAGAAATGGTTTGTGTGAGAACATGTGACAGCAAGGGTGCAGTTACAACTTCTTGCATGCAAGGAGTTGTGGAAAATCTAGGTGACGATGGCTATAGTATCACCGTTGCTTTAGAGTCACGCCATGGTGATCCTACTTTCTCTAAACTATTTGGAAAGAATGTGCGCATTGATCGTATTCAAGGATTGGCTGATACACTTACCTATGAGCGCAACTGTGAAGCCCTAATGCTGCTTCAGAAAAATGGTTTGCAAAAGAAAAATCCATCAATTTCTGTTGTTGCAACTCTATTCGGCGAAGGGGAAGATGCTGCATGGCTTGAGAAGAATAGTTTGGTAGATTGGGAAGAAGAAAAAACAAATGGAGTATTAGGAAGTGAATCCTTTGATAAATCTCAGCAGAGAGCAATTGCGTTAGGTTTGAATAAGAAGAGGCCACTATTGGTTATCCAAGGACCTCCCGGTACAGGCAAGACCGGTTTACTCAAGCAAATAATAACATGCGCCGTGGAACAAGGTGAAAGGGTTCTTGTCACAGCACCTACCAATGCAGCTGTTGATAATATGGTTGAAAAGCTTTCAAATGTTGGAATAAATATTGTTCGAGTTGGAAATCCCGCTCGTATATCAAAAACAGTAGCATCAAAGTCCTTGGGAGAAATTGTAAATGCGAAGCTTGCAAGTTTTCGCGAAGAGTGTGAGAGGAAGAAATCTGATCTAAGGAAAGATCTAAGACAATGTTTGAGGGATGATTCATTAGCTGCAGGCATACGCCAACTTCTGAAACAGTTGGGAAAGTCGCTAAAGAAAAAGGAAAAGCAGACTATTATTGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCCACCAATACCGGAGCAGCCGATCCCATGATTCGAAAGCTAAATGCTTTTGACTTGGTTGTCATAGATGAAGCTGGACAGGCAATTGAACCGTCTTGCTGGATTCCTATATTGCAGGCGAAACGCTGCATTCTTGCTGGTGATCAATGCCAACTAGCTCCTGTGATATTTTCTAGAAAGGCATTAGAAGGTGGTTTAGGAATATCGCTACTCGAGAGAGCTGCAACTCTGCATGAAGGGATTCTCACCACTAGGTTAACGACACAATACCGTATGAATGATGCCATTGCAAGTTGGGCTTCGAAGGAGATGTATGGAGGATTGTTGAAGTCCTCCAAGACTGTCTTTTCTCATCTTCTTGTGGACTCTCCTTTTGTTAAGCCTACATGGATAACACAGTGCCCTCTGCTACTGCTCGACACTCGAATGCCGTATGGAAGTCTATCAATTGGTTGCGAAGAGCATCTAGATCAGGCTGGAACAGGCTCGTTGTATAATGAAGGAGAAGCTGATATAGTTTTGCAGCATGTATTTTCCTTAATTTATGCTGGTGTTAGCCCAAATGCTATTGTAGTTCAGTCCCCATATGTTGCTCAAGTTCAACTTTTGAGGGACATGCTTGACGGGGTTCCTGAAGCTGCCGGTACTGAAGTTTCCACAATTGATAGTTTTCAAGGTCGGGAAGCTGATGCTGTAATTTTATCAATGGTACGATCAAACACATTGGGAGCTGTAGGATTCCTTGGCGATAGCAGAAGAATCAATGTTGCCATCACAAGAGCGCGCAAGCATTTAGCTGTAGTCTGTGACAGCTCAACTATATGCCACAACACGTTCCTAGCAAGACTTATGCGCCATATTCGACACTTTGGTAGGGTGAAGCACGTAGAACCAGATAGTTTTGGAGGAGGGTTTGGACTTGGCATGAATCCAATGTTACCTTCTATGGATTAG
Protein sequence

>Msa0014970

MEATSTCFFCGRIPSKSKLASSSSFGSFCLLTRNNVTTIMCKTSLKTHNRVVQNITNSNETKAPSTTKRRRRRRKNDAAAIEIQLPFENMNKNLLVHENIGDPIGWKDVGKSVVSWIRESMKSMAFEIASAELLEDLEFSEMKQRMGPGLTFVIQAQPYLNAVPMPLGLEVTCLKACTHYPTLFDHFQRELRDVLQDMQSKGLVEDWRQTQSWKLLKELANSAQHRAVARNVTQPKSVQGVLGMDRERVKVLQQRIDEFTQNMSELLNIERDVELEFTQEELDAVPKQDDASDPSKPIEFLVSHSQPQQELCDTICNLNAISTSTGLGGMHLVLFKIEGNHRLPPTTLSPGEMVCVRTCDSKGAVTTSCMQGVVENLGDDGYSITVALESRHGDPTFSKLFGKNVRIDRIQGLADTLTYERNCEALMLLQKNGLQKKNPSISVVATLFGEGEDAAWLEKNSLVDWEEEKTNGVLGSESFDKSQQRAIALGLNKKRPLLVIQGPPGTGKTGLLKQIITCAVEQGERVLVTAPTNAAVDNMVEKLSNVGINIVRVGNPARISKTVASKSLGEIVNAKLASFREECERKKSDLRKDLRQCLRDDSLAAGIRQLLKQLGKSLKKKEKQTIIEVLSSAQVVLATNTGAADPMIRKLNAFDLVVIDEAGQAIEPSCWIPILQAKRCILAGDQCQLAPVIFSRKALEGGLGISLLERAATLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSKTVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSIGCEEHLDQAGTGSLYNEGEADIVLQHVFSLIYAGVSPNAIVVQSPYVAQVQLLRDMLDGVPEAAGTEVSTIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHLAVVCDSSTICHNTFLARLMRHIRHFGRVKHVEPDSFGGGFGLGMNPMLPSMD*