AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0568470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0568470 MtrunA17_Chr8g0383281 97.541 244 6 0 1 244 1 244 4.61e-170 468
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0568470 AT2G21870.1 68.852 244 72 2 1 244 1 240 1.03e-116 333
Msa0568470 AT2G21870.2 69.058 223 66 1 1 223 1 220 1.91e-107 309

Find 104 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGATGGATGCAATCAAAAT+TGG 0.209780 4_1:-70068020 None:intergenic
TTCCAGATTTCAGAGGAATT+TGG 0.214510 4_1:-70067915 None:intergenic
AAAATATTGCATTTGGATAA+TGG 0.231041 4_1:+70067814 Msa0568470:three_prime_UTR
CTTTCTCTGTAACGCTAGTT+AGG 0.245045 4_1:-70064031 None:intergenic
CTTTCTTATCATTTCTCAAT+AGG 0.249875 4_1:-70066596 None:intergenic
AATCTTCAAACTGGCTTCAT+TGG 0.276927 4_1:-70067866 None:intergenic
GATCTGCACCCGTTAGATTA+AGG 0.277269 4_1:+70063870 None:intergenic
AAATGAGGAACAAACCAATT+TGG 0.277914 4_1:-70064104 None:intergenic
TTTCTTATCATTTCTCAATA+GGG 0.290599 4_1:-70066595 None:intergenic
GCAACGGGAGTTTGCTGTTC+CGG 0.291400 4_1:+70064637 Msa0568470:CDS
TTCCAAATTCCTCTGAAATC+TGG 0.301785 4_1:+70067913 Msa0568470:three_prime_UTR
GGAACAAACCAATTTGGATT+TGG 0.309292 4_1:-70064098 None:intergenic
ACATTATAAAATATTGCATT+TGG 0.309979 4_1:+70067807 Msa0568470:three_prime_UTR
CCTCGCATCCAAATCCAAAT+TGG 0.317568 4_1:+70064090 Msa0568470:CDS
AAAAGCTATTGATGAGGAAT+AGG 0.318100 4_1:+70063933 Msa0568470:five_prime_UTR
CTACTCTTGGTATAGCTGTA+TGG 0.323573 4_1:+70064599 Msa0568470:intron
CGGTTCGCCACTTTGCTAAA+GGG 0.331571 4_1:+70064657 Msa0568470:CDS
GAAAGGAATGGACCTTCTTT+TGG 0.332132 4_1:+70066614 Msa0568470:CDS
GGCTTTAATGTTTGATGCAT+TGG 0.345705 4_1:+70066545 Msa0568470:CDS
GTCCGAACTTCCTGCCCTTA+AGG 0.348865 4_1:+70064688 Msa0568470:CDS
CCGGTTCGCCACTTTGCTAA+AGG 0.349850 4_1:+70064656 Msa0568470:CDS
CTTGGTTCTTATTTCCTTCA+AGG 0.354224 4_1:-70065349 None:intergenic
AGACTGCCATCGGAATATTA+AGG 0.383428 4_1:+70065009 Msa0568470:CDS
GGAACTCACCGTCTCCCTTA+AGG 0.389313 4_1:-70064703 None:intergenic
TCCCTTAAGGGCAGGAAGTT+CGG 0.389587 4_1:-70064690 None:intergenic
TTACACTTTGATTCATAACT+TGG 0.399416 4_1:+70068122 Msa0568470:three_prime_UTR
GCAGCTGGAGGAGTTGAAAA+AGG 0.399996 4_1:+70067289 Msa0568470:CDS
GAAACAGCAGCTGGATCCTC+TGG 0.403842 4_1:-70065053 None:intergenic
AAAAGATAAGTTCGAGCATC+AGG 0.404959 4_1:-70065324 None:intergenic
TCCGAACTTCCTGCCCTTAA+GGG 0.407807 4_1:+70064689 Msa0568470:CDS
TCCAGCTGCTCTTCGTACTT+TGG 0.409891 4_1:-70067248 None:intergenic
TCTTCTCTCTCTCTATTCAA+TGG 0.413001 4_1:-70063972 None:intergenic
TCACATTAATAAGAATAATC+CGG 0.413219 4_1:-70067988 None:intergenic
CAACTCCTCCAGCTGCGCTT+TGG 0.413594 4_1:-70067282 None:intergenic
TGGTCAAATGCTTCTGCAAC+GGG 0.416121 4_1:+70064622 Msa0568470:CDS
CCATTTCAGGGAGGAATTCA+AGG 0.418093 4_1:+70067709 Msa0568470:intron
ATCCATCTATTCTTCGATAT+AGG 0.420345 4_1:+70068034 Msa0568470:three_prime_UTR
TGCCTATATCGAAGAATAGA+TGG 0.420754 4_1:-70068036 None:intergenic
GAACTCACCGTCTCCCTTAA+GGG 0.425131 4_1:-70064702 None:intergenic
TAAAATAGCCAAAGCGCAGC+TGG 0.425620 4_1:+70067274 Msa0568470:CDS
AAACTCAAGAATCTTCAAAC+TGG 0.436944 4_1:-70067875 None:intergenic
TTTCTCTGTAACGCTAGTTA+GGG 0.438918 4_1:-70064030 None:intergenic
TGCATTGGAGAAAATTGAAA+AGG 0.441090 4_1:+70066560 Msa0568470:CDS
ATCTGCACCCGTTAGATTAA+GGG 0.442058 4_1:+70063871 None:intergenic
GGCAGGAAGTTCGGACCCTT+CGG 0.446173 4_1:-70064681 None:intergenic
TACACTTTGATTCATAACTT+GGG 0.454071 4_1:+70068123 Msa0568470:three_prime_UTR
GAGGGATCTTTAATAGTAGC+AGG 0.454878 4_1:-70068231 None:intergenic
AGATGGATGCAATCAAAATT+GGG 0.466219 4_1:-70068019 None:intergenic
TTCTTATCATTTCTCAATAG+GGG 0.468292 4_1:-70066594 None:intergenic
CCTTTAGCAAAGTGGCGAAC+CGG 0.468347 4_1:-70064656 None:intergenic
GATTATTCTTATTAATGTGA+TGG 0.470508 4_1:+70067991 Msa0568470:three_prime_UTR
ACGTCAAAACTTTGGACATC+CGG 0.475716 4_1:+70067750 Msa0568470:CDS
AGAGGTCTTACAGATGATCT+TGG 0.479321 4_1:+70066516 Msa0568470:CDS
AGCTGGATCCTCTGGAGCTA+TGG 0.481115 4_1:-70065045 None:intergenic
GGCGGTTGACGTCAAAACTT+TGG 0.482257 4_1:+70067742 Msa0568470:CDS
GAATTCACAAAAGAGAAGAC+TGG 0.486112 4_1:+70068094 Msa0568470:three_prime_UTR
CCTCCGTCCCTTAATCTAAC+GGG 0.486709 4_1:-70063878 None:intergenic
CCCTCCGTCCCTTAATCTAA+CGG 0.499010 4_1:-70063879 None:intergenic
GCCAAAGTACGAAGAGCAGC+TGG 0.499498 4_1:+70067247 Msa0568470:CDS
CACATTAATAAGAATAATCC+GGG 0.506246 4_1:-70067987 None:intergenic
AAAGCTATTGATGAGGAATA+GGG 0.506848 4_1:+70063934 Msa0568470:five_prime_UTR
CAATGGAAACTCAAAAGAAA+AGG 0.507343 4_1:+70067324 Msa0568470:CDS
CTCCTTCCTTAATATTCCGA+TGG 0.511981 4_1:-70065015 None:intergenic
CACTTTGCTAAAGGGTCCGA+AGG 0.513405 4_1:+70064665 Msa0568470:CDS
AATGGAAGTAATCATCATGT+TGG 0.521668 4_1:-70068157 None:intergenic
CAGGGCAAACTTGTTGTCAG+TGG 0.523119 4_1:+70065257 Msa0568470:intron
TATCAAACTCTGCCAAAAGA+AGG 0.529881 4_1:-70066626 None:intergenic
GGGAGTAGAATATATCGAAC+GGG 0.530283 4_1:+70063899 Msa0568470:five_prime_UTR
TATATCGAACGGGTGAGATA+AGG 0.531715 4_1:+70063909 Msa0568470:five_prime_UTR
AAAGGATGCTGTTGAGGCAA+TGG 0.541346 4_1:+70067307 Msa0568470:CDS
TATTTAAAATACTCAAATGA+CGG 0.542670 4_1:-70068060 None:intergenic
GAGAAATGATAAGAAAGGAA+TGG 0.544368 4_1:+70066602 Msa0568470:CDS
TCACCGTCTCCCTTAAGGGC+AGG 0.548905 4_1:-70064698 None:intergenic
ACACTTTGATTCATAACTTG+GGG 0.551500 4_1:+70068124 Msa0568470:three_prime_UTR
AATTCACAAAAGAGAAGACT+GGG 0.564252 4_1:+70068095 Msa0568470:three_prime_UTR
GCATATTGAGAAACAGCAGC+TGG 0.566573 4_1:-70065062 None:intergenic
GTGGTCAAATGCTTCTGCAA+CGG 0.569422 4_1:+70064621 Msa0568470:CDS
AACAAATTTGAGACTGCCAT+CGG 0.570816 4_1:+70064999 Msa0568470:CDS
TACAGATGATCTTGGAGCAG+AGG 0.572998 4_1:+70066524 Msa0568470:CDS
CTTCAACTTCCAGATTTCAG+AGG 0.582652 4_1:-70067922 None:intergenic
TGCTGTTTCTCAATATGCGA+AGG 0.586233 4_1:+70065067 Msa0568470:CDS
TCTATTCAATGGTGAAGTGA+AGG 0.589938 4_1:-70063961 None:intergenic
CTTCGGACCCTTTAGCAAAG+TGG 0.597464 4_1:-70064664 None:intergenic
GTCAGTGGCTCAAGATGTCA+AGG 0.601887 4_1:+70065272 Msa0568470:CDS
CCAATTTGGATTTGGATGCG+AGG 0.606244 4_1:-70064090 None:intergenic
CTCTTGGTATAGCTGTATGG+TGG 0.614864 4_1:+70064602 Msa0568470:intron
GTCTACTTATTGAAGAAACA+TGG 0.615133 4_1:-70067842 None:intergenic
CCGTTAGATTAAGGGACGGA+GGG 0.616428 4_1:+70063879 None:intergenic
GAAGATCACCATAGCTCCAG+AGG 0.616565 4_1:+70065037 Msa0568470:CDS
ATTGCATTTGGATAATGGTG+AGG 0.618610 4_1:+70067819 Msa0568470:three_prime_UTR
CTTCCTGCCCTTAAGGGAGA+CGG 0.620584 4_1:+70064695 Msa0568470:CDS
TGCCATCGGAATATTAAGGA+AGG 0.622802 4_1:+70065013 Msa0568470:CDS
TAAGGTAAAAGCTATTGATG+AGG 0.623192 4_1:+70063927 Msa0568470:five_prime_UTR
AGGGAGTAGAATATATCGAA+CGG 0.625663 4_1:+70063898 Msa0568470:five_prime_UTR
CCCGTTAGATTAAGGGACGG+AGG 0.629133 4_1:+70063878 None:intergenic
GGAATTCAAGGATGAGCCTG+CGG 0.631780 4_1:+70067721 Msa0568470:CDS
CTATTGAGAAATGATAAGAA+AGG 0.632519 4_1:+70066597 Msa0568470:CDS
CACAAAAGAGAAGACTGGGA+TGG 0.649122 4_1:+70068099 Msa0568470:three_prime_UTR
AATAGCCAAAGCGCAGCTGG+AGG 0.651823 4_1:+70067277 Msa0568470:CDS
ATACTGTATCTAAATAAACA+TGG 0.657035 4_1:-70068197 None:intergenic
ATTCAAGGATGAGCCTGCGG+CGG 0.666945 4_1:+70067724 Msa0568470:CDS
GAGGCGTGAAGCGAGTGCCA+TGG 0.683570 4_1:-70064071 None:intergenic
ACTTTGCTAAAGGGTCCGAA+GGG 0.685539 4_1:+70064666 Msa0568470:CDS
GCACCCGTTAGATTAAGGGA+CGG 0.697672 4_1:+70063875 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATAATTTTTATGATG+AGG - chr4_1:70064426-70064445 None:intergenic 10.0%
!! TTTATTAAATTAAATGTGTT+GGG + chr4_1:70064520-70064539 Msa0568470:intron 10.0%
!!! GATTTTTAAATATTATTTTC+TGG + chr4_1:70066766-70066785 Msa0568470:intron 10.0%
!! AAGATTGTTTAAAAAAAAAA+GGG - chr4_1:70068282-70068301 None:intergenic 10.0%
!! AAAGATTGTTTAAAAAAAAA+AGG - chr4_1:70068283-70068302 None:intergenic 10.0%
!! AAAAAGAATAGAAATGAAAT+CGG - chr4_1:70064149-70064168 None:intergenic 15.0%
!! GTTTATTAAATTAAATGTGT+TGG + chr4_1:70064519-70064538 Msa0568470:intron 15.0%
!!! TGTTTCAAATCAAATATTTT+AGG + chr4_1:70065797-70065816 Msa0568470:intron 15.0%
!! GATAAATAATTAAACACTAT+AGG - chr4_1:70067108-70067127 None:intergenic 15.0%
!! TATAATTACTTTACTTAGTT+TGG + chr4_1:70067156-70067175 Msa0568470:intron 15.0%
!! AAAAAAAAAGAAAAAAAAGC+AGG - chr4_1:70067447-70067466 None:intergenic 15.0%
!! AGGAAAAATAAATCATATAA+TGG - chr4_1:70067683-70067702 None:intergenic 15.0%
!! ACATTATAAAATATTGCATT+TGG + chr4_1:70067807-70067826 Msa0568470:three_prime_UTR 15.0%
!!! TATTTAAAATACTCAAATGA+CGG - chr4_1:70068063-70068082 None:intergenic 15.0%
!! AGATTGTTTAAAAAAAAAAG+GGG - chr4_1:70068281-70068300 None:intergenic 15.0%
!!! ATATTTTTTGTTTCGAATAG+TGG - chr4_1:70064254-70064273 None:intergenic 20.0%
!!! AAATTAACTGATTTTTCCAT+TGG + chr4_1:70064279-70064298 Msa0568470:intron 20.0%
!! AATAACCTAATTAGACAAAA+GGG - chr4_1:70064337-70064356 None:intergenic 20.0%
!! TAATAACCTAATTAGACAAA+AGG - chr4_1:70064338-70064357 None:intergenic 20.0%
!!! GAAACTGAATATAATTTTAC+TGG + chr4_1:70064480-70064499 Msa0568470:intron 20.0%
!! AACAACAAAAAAAAATCAGT+AGG - chr4_1:70064558-70064577 None:intergenic 20.0%
!!! TTATATTATATGAGTATCGT+AGG + chr4_1:70064749-70064768 Msa0568470:intron 20.0%
!!! TATATTATATGAGTATCGTA+GGG + chr4_1:70064750-70064769 Msa0568470:intron 20.0%
!! ATTTCTATTGAAAATCAAAG+TGG - chr4_1:70064885-70064904 None:intergenic 20.0%
!! ATATATACAAATGAGAGAAA+AGG + chr4_1:70066406-70066425 Msa0568470:intron 20.0%
!! TATATACAAATGAGAGAAAA+GGG + chr4_1:70066407-70066426 Msa0568470:intron 20.0%
!! TTTCTTATCATTTCTCAATA+GGG - chr4_1:70066598-70066617 None:intergenic 20.0%
!! ATTTAAATGTTTACTTTGCT+AGG + chr4_1:70067076-70067095 Msa0568470:intron 20.0%
!! TTTAAATGTTTACTTTGCTA+GGG + chr4_1:70067077-70067096 Msa0568470:intron 20.0%
!! AAAATATTGCATTTGGATAA+TGG + chr4_1:70067814-70067833 Msa0568470:three_prime_UTR 20.0%
!! TCACATTAATAAGAATAATC+CGG - chr4_1:70067991-70068010 None:intergenic 20.0%
!! GATTATTCTTATTAATGTGA+TGG + chr4_1:70067991-70068010 Msa0568470:three_prime_UTR 20.0%
!! ATACTGTATCTAAATAAACA+TGG - chr4_1:70068200-70068219 None:intergenic 20.0%
!! TTATTCCCTTTTGTCTAATT+AGG + chr4_1:70064329-70064348 Msa0568470:intron 25.0%
! ATTATTTACTAGTTGCATTG+CGG + chr4_1:70064452-70064471 Msa0568470:intron 25.0%
! AACAAAAAAAAATCAGTAGG+TGG - chr4_1:70064555-70064574 None:intergenic 25.0%
! TATACCAAGAGTAGAAAATT+GGG - chr4_1:70064593-70064612 None:intergenic 25.0%
! AAATACAAGTCCAAAGTAAA+GGG - chr4_1:70064728-70064747 None:intergenic 25.0%
! AAAATACAAGTCCAAAGTAA+AGG - chr4_1:70064729-70064748 None:intergenic 25.0%
! TGATTTATGCAAAGAAGAAA+AGG + chr4_1:70064854-70064873 Msa0568470:intron 25.0%
! GATGCTGAAAAACATTTATT+TGG + chr4_1:70064968-70064987 Msa0568470:CDS 25.0%
! TGATAAAAACAACAAGGTAA+AGG - chr4_1:70065125-70065144 None:intergenic 25.0%
! AGACTATGATAAAAACAACA+AGG - chr4_1:70065131-70065150 None:intergenic 25.0%
! AAAGATTACGAGATATAAGT+TGG - chr4_1:70065170-70065189 None:intergenic 25.0%
! AAAATAGAACATCACATACT+TGG - chr4_1:70065370-70065389 None:intergenic 25.0%
!!! ATTTTTCTACTTATCGATTG+AGG + chr4_1:70065645-70065664 Msa0568470:intron 25.0%
!!! TTTTTCTACTTATCGATTGA+GGG + chr4_1:70065646-70065665 Msa0568470:intron 25.0%
!!! AATTTCAGTATTTTTGACGA+AGG - chr4_1:70065768-70065787 None:intergenic 25.0%
!!! TCTTCTTTTTTCTGTTTCAT+CGG - chr4_1:70065918-70065937 None:intergenic 25.0%
! GAAAAAAGAAGAGAGAATAT+AGG + chr4_1:70065926-70065945 Msa0568470:intron 25.0%
! TATCATTTCAATCGAGATTT+AGG + chr4_1:70066078-70066097 Msa0568470:intron 25.0%
! AATCGAGATTTAGGAAATAT+GGG + chr4_1:70066087-70066106 Msa0568470:intron 25.0%
! ATAACAACAACAACAATTCA+GGG - chr4_1:70066294-70066313 None:intergenic 25.0%
! AATAACAACAACAACAATTC+AGG - chr4_1:70066295-70066314 None:intergenic 25.0%
! TTCTTATCATTTCTCAATAG+GGG - chr4_1:70066597-70066616 None:intergenic 25.0%
! CTTTCTTATCATTTCTCAAT+AGG - chr4_1:70066599-70066618 None:intergenic 25.0%
! CTATTGAGAAATGATAAGAA+AGG + chr4_1:70066597-70066616 Msa0568470:CDS 25.0%
! TATGTTGTCATGCAATTTAA+CGG + chr4_1:70066722-70066741 Msa0568470:intron 25.0%
!! TTTCCAAATATTGCATTTTG+TGG + chr4_1:70066946-70066965 Msa0568470:intron 25.0%
! AACTAAATTGAATCCACAAA+AGG - chr4_1:70067029-70067048 None:intergenic 25.0%
!! TATTTTGCCTCCTAAAAAAA+GGG - chr4_1:70067364-70067383 None:intergenic 25.0%
!!! TTATTTTGCCTCCTAAAAAA+AGG - chr4_1:70067365-70067384 None:intergenic 25.0%
! TGGAATATATGAATTTCACA+TGG + chr4_1:70067571-70067590 Msa0568470:intron 25.0%
!! ATACGTTGAAGACATTTTAA+AGG - chr4_1:70067781-70067800 None:intergenic 25.0%
! CACATTAATAAGAATAATCC+GGG - chr4_1:70067990-70068009 None:intergenic 25.0%
! TTACACTTTGATTCATAACT+TGG + chr4_1:70068122-70068141 Msa0568470:three_prime_UTR 25.0%
! TACACTTTGATTCATAACTT+GGG + chr4_1:70068123-70068142 Msa0568470:three_prime_UTR 25.0%
!!! GTTTTCAATTTGCTTTCAAA+TGG - chr4_1:70068178-70068197 None:intergenic 25.0%
TAAGGTAAAAGCTATTGATG+AGG + chr4_1:70063927-70063946 Msa0568470:five_prime_UTR 30.0%
AAAAGCTATTGATGAGGAAT+AGG + chr4_1:70063933-70063952 Msa0568470:five_prime_UTR 30.0%
AAAGCTATTGATGAGGAATA+GGG + chr4_1:70063934-70063953 Msa0568470:five_prime_UTR 30.0%
AAATGAGGAACAAACCAATT+TGG - chr4_1:70064107-70064126 None:intergenic 30.0%
GAGAATGAATAGAAGAAATG+AGG - chr4_1:70064122-70064141 None:intergenic 30.0%
ATGCCAGAAACTCTAATATT+GGG + chr4_1:70064191-70064210 Msa0568470:intron 30.0%
TCATCAATTATCATTAGCCA+TGG + chr4_1:70064400-70064419 Msa0568470:intron 30.0%
! TAATTTTTATGATGAGGCCA+TGG - chr4_1:70064420-70064439 None:intergenic 30.0%
CTATACCAAGAGTAGAAAAT+TGG - chr4_1:70064594-70064613 None:intergenic 30.0%
AATACAAGTCCAAAGTAAAG+GGG - chr4_1:70064727-70064746 None:intergenic 30.0%
!! ATTTTGTTGTGCATTCTTCA+GGG + chr4_1:70065239-70065258 Msa0568470:intron 30.0%
! AACTTATCTTTTGACCTTGA+AGG + chr4_1:70065335-70065354 Msa0568470:CDS 30.0%
GCACATCATCTAGTTAAAAA+TGG - chr4_1:70065398-70065417 None:intergenic 30.0%
!! TTTGATTTGAAACACACTAC+TGG - chr4_1:70065791-70065810 None:intergenic 30.0%
AATCAGTACCATAAGAAAGA+AGG + chr4_1:70065889-70065908 Msa0568470:intron 30.0%
GAGAATATAGGATAAGCTTA+AGG + chr4_1:70065938-70065957 Msa0568470:intron 30.0%
TCTCGATTGAAATGATATCA+TGG - chr4_1:70066075-70066094 None:intergenic 30.0%
CAATCGAGATTTAGGAAATA+TGG + chr4_1:70066086-70066105 Msa0568470:intron 30.0%
ATCGAGATTTAGGAAATATG+GGG + chr4_1:70066088-70066107 Msa0568470:intron 30.0%
AGAACCACATGTTTAAAAGA+AGG - chr4_1:70066227-70066246 None:intergenic 30.0%
!! TCAGGGTATTCATAATTTTG+AGG - chr4_1:70066277-70066296 None:intergenic 30.0%
TTTGAAAAGGACAACTAATC+GGG - chr4_1:70066362-70066381 None:intergenic 30.0%
GTTTGAAAAGGACAACTAAT+CGG - chr4_1:70066363-70066382 None:intergenic 30.0%
TCACATTTGCTCATATATCT+GGG + chr4_1:70066477-70066496 Msa0568470:intron 30.0%
TGCATTGGAGAAAATTGAAA+AGG + chr4_1:70066560-70066579 Msa0568470:CDS 30.0%
GAGAAATGATAAGAAAGGAA+TGG + chr4_1:70066602-70066621 Msa0568470:CDS 30.0%
AGCTTGAAAAGATACAACAT+AGG - chr4_1:70066678-70066697 None:intergenic 30.0%
ATGTTGTCATGCAATTTAAC+GGG + chr4_1:70066723-70066742 Msa0568470:intron 30.0%
! GATCATTTTACAACAGAATG+AGG - chr4_1:70066811-70066830 None:intergenic 30.0%
! TCGAGTCTTGTAATTTATGA+AGG + chr4_1:70066899-70066918 Msa0568470:intron 30.0%
ATTTGAGCAGAATGAATTAC+TGG + chr4_1:70067131-70067150 Msa0568470:intron 30.0%
TTTGAGCAGAATGAATTACT+GGG + chr4_1:70067132-70067151 Msa0568470:intron 30.0%
CAATGGAAACTCAAAAGAAA+AGG + chr4_1:70067324-70067343 Msa0568470:CDS 30.0%
CAGAAGTTAGAACTTAGAAA+TGG - chr4_1:70067400-70067419 None:intergenic 30.0%
AAAAAAAAGCAGGAGAATCA+GGG - chr4_1:70067437-70067456 None:intergenic 30.0%
CTATCTTCAAAGTTAGAATC+AGG - chr4_1:70067520-70067539 None:intergenic 30.0%
AGTAGTATAAAATGTCCCTA+TGG + chr4_1:70067538-70067557 Msa0568470:intron 30.0%
TTCCAAATTCAAAAGCCATA+GGG - chr4_1:70067556-70067575 None:intergenic 30.0%
ATTCCAAATTCAAAAGCCAT+AGG - chr4_1:70067557-70067576 None:intergenic 30.0%
CCTATTTCCAACAAATCAAT+TGG - chr4_1:70067598-70067617 None:intergenic 30.0%
!! CCAATTGATTTGTTGGAAAT+AGG + chr4_1:70067595-70067614 Msa0568470:intron 30.0%
TGGAAATAGGACTATTGTTA+TGG + chr4_1:70067608-70067627 Msa0568470:intron 30.0%
!! AGACATTTTAAAGGAAGTTC+CGG - chr4_1:70067772-70067791 None:intergenic 30.0%
GTCTACTTATTGAAGAAACA+TGG - chr4_1:70067845-70067864 None:intergenic 30.0%
AAACTCAAGAATCTTCAAAC+TGG - chr4_1:70067878-70067897 None:intergenic 30.0%
!!! TTTTGTCAAGTTGTTTTTCC+CGG + chr4_1:70067969-70067988 Msa0568470:three_prime_UTR 30.0%
AGATGGATGCAATCAAAATT+GGG - chr4_1:70068022-70068041 None:intergenic 30.0%
TAGATGGATGCAATCAAAAT+TGG - chr4_1:70068023-70068042 None:intergenic 30.0%
ATCCATCTATTCTTCGATAT+AGG + chr4_1:70068034-70068053 Msa0568470:three_prime_UTR 30.0%
AATTCACAAAAGAGAAGACT+GGG + chr4_1:70068095-70068114 Msa0568470:three_prime_UTR 30.0%
ACACTTTGATTCATAACTTG+GGG + chr4_1:70068124-70068143 Msa0568470:three_prime_UTR 30.0%
AATGGAAGTAATCATCATGT+TGG - chr4_1:70068160-70068179 None:intergenic 30.0%
! ATCCCTCTAAAAATATTGCA+GGG + chr4_1:70068247-70068266 Msa0568470:three_prime_UTR 30.0%
!!! TTCCCTGCAATATTTTTAGA+GGG - chr4_1:70068252-70068271 None:intergenic 30.0%
!!! ATTCCCTGCAATATTTTTAG+AGG - chr4_1:70068253-70068272 None:intergenic 30.0%
AGGGAGTAGAATATATCGAA+CGG + chr4_1:70063898-70063917 Msa0568470:five_prime_UTR 35.0%
TCTATTCAATGGTGAAGTGA+AGG - chr4_1:70063964-70063983 None:intergenic 35.0%
TCTTCTCTCTCTCTATTCAA+TGG - chr4_1:70063975-70063994 None:intergenic 35.0%
TTTCTCTGTAACGCTAGTTA+GGG - chr4_1:70064033-70064052 None:intergenic 35.0%
GGAACAAACCAATTTGGATT+TGG - chr4_1:70064101-70064120 None:intergenic 35.0%
CTGGCATGAAAATCAGAAAT+TGG - chr4_1:70064178-70064197 None:intergenic 35.0%
CATGCCAGAAACTCTAATAT+TGG + chr4_1:70064190-70064209 Msa0568470:intron 35.0%
GATCCCAATATTAGAGTTTC+TGG - chr4_1:70064197-70064216 None:intergenic 35.0%
! CGAATAGTGGAATTGAGAAT+CGG - chr4_1:70064241-70064260 None:intergenic 35.0%
TCTTAACACTCGAAATCCAA+TGG - chr4_1:70064298-70064317 None:intergenic 35.0%
! AACAAATTTGAGACTGCCAT+CGG + chr4_1:70064999-70065018 Msa0568470:CDS 35.0%
AAGAATGCACAACAAAATGC+AGG - chr4_1:70065237-70065256 None:intergenic 35.0%
!! CATTTTGTTGTGCATTCTTC+AGG + chr4_1:70065238-70065257 Msa0568470:intron 35.0%
AAAAGATAAGTTCGAGCATC+AGG - chr4_1:70065327-70065346 None:intergenic 35.0%
! CTTGGTTCTTATTTCCTTCA+AGG - chr4_1:70065352-70065371 None:intergenic 35.0%
TACCTTTCTTCTCATTGTCA+AGG + chr4_1:70065564-70065583 Msa0568470:intron 35.0%
!! AGTATTTTTGACGAAGGTGT+GGG - chr4_1:70065762-70065781 None:intergenic 35.0%
!!! GGTACTGATTGTTTTGACTT+GGG - chr4_1:70065879-70065898 None:intergenic 35.0%
!!! TGGTACTGATTGTTTTGACT+TGG - chr4_1:70065880-70065899 None:intergenic 35.0%
ATCGGTTACCTTCTTTCTTA+TGG - chr4_1:70065900-70065919 None:intergenic 35.0%
AGATTTAGGAAATATGGGGA+AGG + chr4_1:70066092-70066111 Msa0568470:intron 35.0%
ACAGACACAACTACATTAAG+TGG - chr4_1:70066195-70066214 None:intergenic 35.0%
! AACGCCTTCTTTTAAACATG+TGG + chr4_1:70066220-70066239 Msa0568470:intron 35.0%
GTCACATTTGCTCATATATC+TGG + chr4_1:70066476-70066495 Msa0568470:intron 35.0%
! ATCTGGGTACATTTCTTTTC+AGG + chr4_1:70066493-70066512 Msa0568470:intron 35.0%
! GGCTTTAATGTTTGATGCAT+TGG + chr4_1:70066545-70066564 Msa0568470:CDS 35.0%
TATCAAACTCTGCCAAAAGA+AGG - chr4_1:70066629-70066648 None:intergenic 35.0%
CGGGATACTTTCTATATGTT+TGG + chr4_1:70066742-70066761 Msa0568470:intron 35.0%
CAGCCACAAAATGCAATATT+TGG - chr4_1:70066952-70066971 None:intergenic 35.0%
! TTGAATGCTAGCTTCTGTTT+CGG + chr4_1:70067051-70067070 Msa0568470:intron 35.0%
AAATGTTTACTTTGCTAGGG+AGG + chr4_1:70067080-70067099 Msa0568470:intron 35.0%
TCAAAGGGTGAAAAAACAAC+AGG - chr4_1:70067189-70067208 None:intergenic 35.0%
!!! GTTGTTTTTTCACCCTTTGA+TGG + chr4_1:70067189-70067208 Msa0568470:intron 35.0%
TTCGAATTCCAAGTCTAAGA+TGG - chr4_1:70067217-70067236 None:intergenic 35.0%
GAAAAAAAAGCAGGAGAATC+AGG - chr4_1:70067438-70067457 None:intergenic 35.0%
!! ACATGGACCAATTGATTTGT+TGG + chr4_1:70067588-70067607 Msa0568470:intron 35.0%
! ATTGCATTTGGATAATGGTG+AGG + chr4_1:70067819-70067838 Msa0568470:three_prime_UTR 35.0%
! AATCTTCAAACTGGCTTCAT+TGG - chr4_1:70067869-70067888 None:intergenic 35.0%
!! TTCCAAATTCCTCTGAAATC+TGG + chr4_1:70067913-70067932 Msa0568470:three_prime_UTR 35.0%
TTCCAGATTTCAGAGGAATT+TGG - chr4_1:70067918-70067937 None:intergenic 35.0%
TGCCTATATCGAAGAATAGA+TGG - chr4_1:70068039-70068058 None:intergenic 35.0%
GAATTCACAAAAGAGAAGAC+TGG + chr4_1:70068094-70068113 Msa0568470:three_prime_UTR 35.0%
! GATCCCTCTAAAAATATTGC+AGG + chr4_1:70068246-70068265 Msa0568470:three_prime_UTR 35.0%
GGGAGTAGAATATATCGAAC+GGG + chr4_1:70063899-70063918 Msa0568470:five_prime_UTR 40.0%
TATATCGAACGGGTGAGATA+AGG + chr4_1:70063909-70063928 Msa0568470:five_prime_UTR 40.0%
CTTTCTCTGTAACGCTAGTT+AGG - chr4_1:70064034-70064053 None:intergenic 40.0%
CTCATCATCATCATCAACCA+TGG + chr4_1:70064054-70064073 Msa0568470:exon 40.0%
! TGTGCCCAATTTTCTACTCT+TGG + chr4_1:70064586-70064605 Msa0568470:intron 40.0%
CTACTCTTGGTATAGCTGTA+TGG + chr4_1:70064599-70064618 Msa0568470:intron 40.0%
! TTTGTGTCTGAGACAGTGAT+AGG + chr4_1:70064775-70064794 Msa0568470:intron 40.0%
AGACTGCCATCGGAATATTA+AGG + chr4_1:70065009-70065028 Msa0568470:CDS 40.0%
TGCCATCGGAATATTAAGGA+AGG + chr4_1:70065013-70065032 Msa0568470:CDS 40.0%
CTCCTTCCTTAATATTCCGA+TGG - chr4_1:70065018-70065037 None:intergenic 40.0%
!! TGCTGTTTCTCAATATGCGA+AGG + chr4_1:70065067-70065086 Msa0568470:CDS 40.0%
CACCTTGACAATGAGAAGAA+AGG - chr4_1:70065569-70065588 None:intergenic 40.0%
! TGTCAAGGTGCTTTCTCTTA+AGG + chr4_1:70065579-70065598 Msa0568470:intron 40.0%
TCTTAAGGTGGTGTCTAACA+TGG + chr4_1:70065594-70065613 Msa0568470:intron 40.0%
TGGTGTCTAACATGGACAAT+CGG + chr4_1:70065602-70065621 Msa0568470:intron 40.0%
!! GGAGAAAACTATGGTGTTGT+GGG - chr4_1:70065694-70065713 None:intergenic 40.0%
CAGATACAGAGTGATTAGGA+GGG - chr4_1:70065721-70065740 None:intergenic 40.0%
ACAGATACAGAGTGATTAGG+AGG - chr4_1:70065722-70065741 None:intergenic 40.0%
!! TATTTTTGACGAAGGTGTGG+GGG - chr4_1:70065760-70065779 None:intergenic 40.0%
!! GTATTTTTGACGAAGGTGTG+GGG - chr4_1:70065761-70065780 None:intergenic 40.0%
!! CAGTATTTTTGACGAAGGTG+TGG - chr4_1:70065763-70065782 None:intergenic 40.0%
CATCTCCAGTGTTAAATCTC+CGG + chr4_1:70066021-70066040 Msa0568470:intron 40.0%
ATATGGGGAAGGATTTAGCA+TGG + chr4_1:70066103-70066122 Msa0568470:intron 40.0%
GAACACCATAGAATCTAGTG+AGG + chr4_1:70066129-70066148 Msa0568470:intron 40.0%
TGAAGCCTCACTAGATTCTA+TGG - chr4_1:70066137-70066156 None:intergenic 40.0%
GCACGCACATAAGTTTGAAA+AGG - chr4_1:70066375-70066394 None:intergenic 40.0%
!! GGTACATTTCTTTTCAGGAG+AGG + chr4_1:70066498-70066517 Msa0568470:intron 40.0%
AGAGGTCTTACAGATGATCT+TGG + chr4_1:70066516-70066535 Msa0568470:CDS 40.0%
! GAAAGGAATGGACCTTCTTT+TGG + chr4_1:70066614-70066633 Msa0568470:CDS 40.0%
TATAGTCTATCCTCTATGCG+TGG + chr4_1:70066990-70067009 Msa0568470:intron 40.0%
ATAGTCTATCCTCTATGCGT+GGG + chr4_1:70066991-70067010 Msa0568470:intron 40.0%
! GTGGTCAATTGTTCCTTTTG+TGG + chr4_1:70067013-70067032 Msa0568470:intron 40.0%
AAGGGTGAAAAAACAACAGG+AGG - chr4_1:70067186-70067205 None:intergenic 40.0%
! TCTAAGATGGCACCATCAAA+GGG - chr4_1:70067204-70067223 None:intergenic 40.0%
GTTGAAAAAGGATGCTGTTG+AGG + chr4_1:70067301-70067320 Msa0568470:CDS 40.0%
TTTGCCTCCTAAAAAAAGGG+TGG - chr4_1:70067361-70067380 None:intergenic 40.0%
AAACACCTTTGTTAAGCGCA+TGG + chr4_1:70067475-70067494 Msa0568470:intron 40.0%
AAGTACCATGCGCTTAACAA+AGG - chr4_1:70067483-70067502 None:intergenic 40.0%
! GTCCCTATGGCTTTTGAATT+TGG + chr4_1:70067551-70067570 Msa0568470:intron 40.0%
!! TTTTCCTTGTCTGCCATTTC+AGG + chr4_1:70067696-70067715 Msa0568470:intron 40.0%
! TTTCCTTGTCTGCCATTTCA+GGG + chr4_1:70067697-70067716 Msa0568470:intron 40.0%
ACGTCAAAACTTTGGACATC+CGG + chr4_1:70067750-70067769 Msa0568470:CDS 40.0%
CTTCAACTTCCAGATTTCAG+AGG - chr4_1:70067925-70067944 None:intergenic 40.0%
GAGGGATCTTTAATAGTAGC+AGG - chr4_1:70068234-70068253 None:intergenic 40.0%
CCAATTTGGATTTGGATGCG+AGG - chr4_1:70064093-70064112 None:intergenic 45.0%
CCTCGCATCCAAATCCAAAT+TGG + chr4_1:70064090-70064109 Msa0568470:CDS 45.0%
CTCTTGGTATAGCTGTATGG+TGG + chr4_1:70064602-70064621 Msa0568470:intron 45.0%
GTGGTCAAATGCTTCTGCAA+CGG + chr4_1:70064621-70064640 Msa0568470:CDS 45.0%
TGGTCAAATGCTTCTGCAAC+GGG + chr4_1:70064622-70064641 Msa0568470:CDS 45.0%
ACTTTGCTAAAGGGTCCGAA+GGG + chr4_1:70064666-70064685 Msa0568470:CDS 45.0%
TGAGACAGTGATAGGCATGT+TGG + chr4_1:70064783-70064802 Msa0568470:intron 45.0%
GCATATTGAGAAACAGCAGC+TGG - chr4_1:70065065-70065084 None:intergenic 45.0%
! CAAGGTGCTTTCTCTTAAGG+TGG + chr4_1:70065582-70065601 Msa0568470:intron 45.0%
ACATGGACAATCGGTCTTTG+TGG + chr4_1:70065611-70065630 Msa0568470:intron 45.0%
! GGGAGAAAACTATGGTGTTG+TGG - chr4_1:70065695-70065714 None:intergenic 45.0%
ACAGAGTGATTAGGAGGGAA+GGG - chr4_1:70065716-70065735 None:intergenic 45.0%
TACAGAGTGATTAGGAGGGA+AGG - chr4_1:70065717-70065736 None:intergenic 45.0%
GGGACAGATACAGAGTGATT+AGG - chr4_1:70065725-70065744 None:intergenic 45.0%
!!! CTGATTGTTTTGACTTGGGC+AGG - chr4_1:70065875-70065894 None:intergenic 45.0%
TACATTCATAACCCCAACGC+CGG + chr4_1:70065986-70066005 Msa0568470:intron 45.0%
TTTAACACTGGAGATGCTCC+AGG - chr4_1:70066017-70066036 None:intergenic 45.0%
TGGTCCTCAAGTTCTGTTGT+TGG - chr4_1:70066055-70066074 None:intergenic 45.0%
ATGCAGACATCTCTTGCAAC+AGG + chr4_1:70066436-70066455 Msa0568470:intron 45.0%
! CTTGCAACAGGTGTTACATC+AGG + chr4_1:70066448-70066467 Msa0568470:intron 45.0%
TACAGATGATCTTGGAGCAG+AGG + chr4_1:70066524-70066543 Msa0568470:CDS 45.0%
!! TTTTGTGGCTGCTGCTTGTT+TGG + chr4_1:70066961-70066980 Msa0568470:intron 45.0%
! TTTGTGGCTGCTGCTTGTTT+GGG + chr4_1:70066962-70066981 Msa0568470:intron 45.0%
! GTCTAAGATGGCACCATCAA+AGG - chr4_1:70067205-70067224 None:intergenic 45.0%
!! TGATGGTGCCATCTTAGACT+TGG + chr4_1:70067206-70067225 Msa0568470:intron 45.0%
TAAAATAGCCAAAGCGCAGC+TGG + chr4_1:70067274-70067293 Msa0568470:CDS 45.0%
AAAGGATGCTGTTGAGGCAA+TGG + chr4_1:70067307-70067326 Msa0568470:CDS 45.0%
CCTAAAAAAAGGGTGGTGTG+AGG - chr4_1:70067354-70067373 None:intergenic 45.0%
!!! CCTCACACCACCCTTTTTTT+AGG + chr4_1:70067351-70067370 Msa0568470:intron 45.0%
!!! CACACCACCCTTTTTTTAGG+AGG + chr4_1:70067354-70067373 Msa0568470:intron 45.0%
CCTTGAATTCCTCCCTGAAA+TGG - chr4_1:70067712-70067731 None:intergenic 45.0%
CCATTTCAGGGAGGAATTCA+AGG + chr4_1:70067709-70067728 Msa0568470:intron 45.0%
CACAAAAGAGAAGACTGGGA+TGG + chr4_1:70068099-70068118 Msa0568470:three_prime_UTR 45.0%
CCTTTAGCAAAGTGGCGAAC+CGG - chr4_1:70064659-70064678 None:intergenic 50.0%
! CGGTTCGCCACTTTGCTAAA+GGG + chr4_1:70064657-70064676 Msa0568470:CDS 50.0%
CTTCGGACCCTTTAGCAAAG+TGG - chr4_1:70064667-70064686 None:intergenic 50.0%
CACTTTGCTAAAGGGTCCGA+AGG + chr4_1:70064665-70064684 Msa0568470:CDS 50.0%
TCCGAACTTCCTGCCCTTAA+GGG + chr4_1:70064689-70064708 Msa0568470:CDS 50.0%
TCCCTTAAGGGCAGGAAGTT+CGG - chr4_1:70064693-70064712 None:intergenic 50.0%
GAACTCACCGTCTCCCTTAA+GGG - chr4_1:70064705-70064724 None:intergenic 50.0%
CGGTGAGTTCCCCTTTACTT+TGG + chr4_1:70064715-70064734 Msa0568470:intron 50.0%
GAAGATCACCATAGCTCCAG+AGG + chr4_1:70065037-70065056 Msa0568470:CDS 50.0%
!! CAGGGCAAACTTGTTGTCAG+TGG + chr4_1:70065257-70065276 Msa0568470:intron 50.0%
GTCAGTGGCTCAAGATGTCA+AGG + chr4_1:70065272-70065291 Msa0568470:CDS 50.0%
GAGGGAAGGGGAGAAAACTA+TGG - chr4_1:70065703-70065722 None:intergenic 50.0%
CAGAGTGATTAGGAGGGAAG+GGG - chr4_1:70065715-70065734 None:intergenic 50.0%
! TGACTTGGGCAGGAGAAAGT+GGG - chr4_1:70065865-70065884 None:intergenic 50.0%
!! TTGACTTGGGCAGGAGAAAG+TGG - chr4_1:70065866-70065885 None:intergenic 50.0%
! CAGTGCCGGAGATTTAACAC+TGG - chr4_1:70066029-70066048 None:intergenic 50.0%
CAGTGTTAAATCTCCGGCAC+TGG + chr4_1:70066027-70066046 Msa0568470:intron 50.0%
GGGGAAGGATTTAGCATGGA+AGG + chr4_1:70066107-70066126 Msa0568470:intron 50.0%
AATTGACCACCCACGCATAG+AGG - chr4_1:70067003-70067022 None:intergenic 50.0%
TCCAGCTGCTCTTCGTACTT+TGG - chr4_1:70067251-70067270 None:intergenic 50.0%
GCAGCTGGAGGAGTTGAAAA+AGG + chr4_1:70067289-70067308 Msa0568470:CDS 50.0%
AGCAGGAGAATCAGGGAGAA+CGG - chr4_1:70067430-70067449 None:intergenic 50.0%
GGAATTCAAGGATGAGCCTG+CGG + chr4_1:70067721-70067740 Msa0568470:CDS 50.0%
GGCGGTTGACGTCAAAACTT+TGG + chr4_1:70067742-70067761 Msa0568470:CDS 50.0%
!! GCAACGGGAGTTTGCTGTTC+CGG + chr4_1:70064637-70064656 Msa0568470:CDS 55.0%
! CCGGTTCGCCACTTTGCTAA+AGG + chr4_1:70064656-70064675 Msa0568470:CDS 55.0%
GTCCGAACTTCCTGCCCTTA+AGG + chr4_1:70064688-70064707 Msa0568470:CDS 55.0%
CTTCCTGCCCTTAAGGGAGA+CGG + chr4_1:70064695-70064714 Msa0568470:CDS 55.0%
GGAACTCACCGTCTCCCTTA+AGG - chr4_1:70064706-70064725 None:intergenic 55.0%
!! AGCTGGATCCTCTGGAGCTA+TGG - chr4_1:70065048-70065067 None:intergenic 55.0%
GAAACAGCAGCTGGATCCTC+TGG - chr4_1:70065056-70065075 None:intergenic 55.0%
! TGTGGGGGTGGTTCTATCGT+GGG - chr4_1:70065745-70065764 None:intergenic 55.0%
!! TTTTGACGAAGGTGTGGGGG+TGG - chr4_1:70065757-70065776 None:intergenic 55.0%
AACACTGGAGATGCTCCAGG+TGG - chr4_1:70066014-70066033 None:intergenic 55.0%
GGCGCCAACAACAGAACTTG+AGG + chr4_1:70066048-70066067 Msa0568470:intron 55.0%
GTCTATCCTCTATGCGTGGG+TGG + chr4_1:70066994-70067013 Msa0568470:intron 55.0%
GCCAAAGTACGAAGAGCAGC+TGG + chr4_1:70067247-70067266 Msa0568470:CDS 55.0%
AATAGCCAAAGCGCAGCTGG+AGG + chr4_1:70067277-70067296 Msa0568470:CDS 55.0%
CCTCCCTGAAATGGCAGACA+AGG - chr4_1:70067703-70067722 None:intergenic 55.0%
! CCTTGTCTGCCATTTCAGGG+AGG + chr4_1:70067700-70067719 Msa0568470:intron 55.0%
ATTCAAGGATGAGCCTGCGG+CGG + chr4_1:70067724-70067743 Msa0568470:CDS 55.0%
GGCAGGAAGTTCGGACCCTT+CGG - chr4_1:70064684-70064703 None:intergenic 60.0%
TCACCGTCTCCCTTAAGGGC+AGG - chr4_1:70064701-70064720 None:intergenic 60.0%
! GTGTGGGGGTGGTTCTATCG+TGG - chr4_1:70065746-70065765 None:intergenic 60.0%
GGGCAGGAGAAAGTGGGTGT+GGG - chr4_1:70065859-70065878 None:intergenic 60.0%
TGGGCAGGAGAAAGTGGGTG+TGG - chr4_1:70065860-70065879 None:intergenic 60.0%
GGAGATGCTCCAGGTGGAAC+CGG - chr4_1:70066008-70066027 None:intergenic 60.0%
TCTGTTGTTGGCGCCAGTGC+CGG - chr4_1:70066043-70066062 None:intergenic 60.0%
CAACTCCTCCAGCTGCGCTT+TGG - chr4_1:70067285-70067304 None:intergenic 60.0%
!! GTTTTGACGTCAACCGCCGC+AGG - chr4_1:70067740-70067759 None:intergenic 60.0%
GAGGCGTGAAGCGAGTGCCA+TGG - chr4_1:70064074-70064093 None:intergenic 65.0%
TCCAGGTGGAACCGGCGTTG+GGG - chr4_1:70066000-70066019 None:intergenic 65.0%
CTCCAGGTGGAACCGGCGTT+GGG - chr4_1:70066001-70066020 None:intergenic 65.0%
!! ACCCCAACGCCGGTTCCACC+TGG + chr4_1:70065996-70066015 Msa0568470:intron 70.0%
GCTCCAGGTGGAACCGGCGT+TGG - chr4_1:70066002-70066021 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 70063881 70068302 70063881 ID=Msa0568470;Name=Msa0568470
chr4_1 mRNA 70063881 70068302 70063881 ID=Msa0568470-mRNA-1;Parent=Msa0568470;Name=Msa0568470-mRNA-1;_AED=0.03;_eAED=0.03;_QI=192|1|1|1|1|1|7|518|244
chr4_1 exon 70063881 70064111 70063881 ID=Msa0568470-mRNA-1:exon:23525;Parent=Msa0568470-mRNA-1
chr4_1 exon 70064614 70064716 70064614 ID=Msa0568470-mRNA-1:exon:23526;Parent=Msa0568470-mRNA-1
chr4_1 exon 70064967 70065111 70064967 ID=Msa0568470-mRNA-1:exon:23527;Parent=Msa0568470-mRNA-1
chr4_1 exon 70065260 70065370 70065260 ID=Msa0568470-mRNA-1:exon:23528;Parent=Msa0568470-mRNA-1
chr4_1 exon 70066515 70066661 70066515 ID=Msa0568470-mRNA-1:exon:23529;Parent=Msa0568470-mRNA-1
chr4_1 exon 70067223 70067345 70067223 ID=Msa0568470-mRNA-1:exon:23530;Parent=Msa0568470-mRNA-1
chr4_1 exon 70067718 70068302 70067718 ID=Msa0568470-mRNA-1:exon:23531;Parent=Msa0568470-mRNA-1
chr4_1 five_prime_UTR 70063881 70064072 70063881 ID=Msa0568470-mRNA-1:five_prime_utr;Parent=Msa0568470-mRNA-1
chr4_1 CDS 70064073 70064111 70064073 ID=Msa0568470-mRNA-1:cds;Parent=Msa0568470-mRNA-1
chr4_1 CDS 70064614 70064716 70064614 ID=Msa0568470-mRNA-1:cds;Parent=Msa0568470-mRNA-1
chr4_1 CDS 70064967 70065111 70064967 ID=Msa0568470-mRNA-1:cds;Parent=Msa0568470-mRNA-1
chr4_1 CDS 70065260 70065370 70065260 ID=Msa0568470-mRNA-1:cds;Parent=Msa0568470-mRNA-1
chr4_1 CDS 70066515 70066661 70066515 ID=Msa0568470-mRNA-1:cds;Parent=Msa0568470-mRNA-1
chr4_1 CDS 70067223 70067345 70067223 ID=Msa0568470-mRNA-1:cds;Parent=Msa0568470-mRNA-1
chr4_1 CDS 70067718 70067784 70067718 ID=Msa0568470-mRNA-1:cds;Parent=Msa0568470-mRNA-1
chr4_1 three_prime_UTR 70067785 70068302 70067785 ID=Msa0568470-mRNA-1:three_prime_utr;Parent=Msa0568470-mRNA-1
Gene Sequence

>Msa0568470

ATGGCACTCGCTTCACGCCTCGCATCCAAATCCAAATTGCTGTATGGTGGTCAAATGCTTCTGCAACGGGAGTTTGCTGTTCCGGTTCGCCACTTTGCTAAAGGGTCCGAAGGGTCCGAACTTCCTGCCCTTAAGGGAGACGAGATGCTGAAAAACATTTATTTGGAAGTGAAGAACAAATTTGAGACTGCCATCGGAATATTAAGGAAGGAGAAGATCACCATAGCTCCAGAGGATCCAGCTGCTGTTTCTCAATATGCGAAGGTCATGAAAACTATCAGAGAGAAGGCAAACTTGTTGTCAGTGGCTCAAGATGTCAAGGCTGACATTGATATAGAGACACAAGATATTCCTGATGCTCGAACTTATCTTTTGACCTTGAAGGAAATAAGAACCAAGAGAGGTCTTACAGATGATCTTGGAGCAGAGGCTTTAATGTTTGATGCATTGGAGAAAATTGAAAAGGATTTAAAGAAACCCCTATTGAGAAATGATAAGAAAGGAATGGACCTTCTTTTGGCAGAGTTTGATAAGATTAATAACAAACTTGGAATTCGAAAAGAAGAATTGCCAAAGTACGAAGAGCAGCTGGAGCTTAAAATAGCCAAAGCGCAGCTGGAGGAGTTGAAAAAGGATGCTGTTGAGGCAATGGAAACTCAAAAGAAAAGGGAGGAATTCAAGGATGAGCCTGCGGCGGTTGACGTCAAAACTTTGGACATCCGGAACTTCCTTTAA
Protein sequence

>Msa0568470

MALASRLASKSKLLYGGQMLLQREFAVPVRHFAKGSEGSELPALKGDEMLKNIYLEVKNKFETAIGILRKEKITIAPEDPAAVSQYAKVMKTIREKANLLSVAQDVKADIDIETQDIPDARTYLLTLKEIRTKRGLTDDLGAEALMFDALEKIEKDLKKPLLRNDKKGMDLLLAEFDKINNKLGIRKEELPKYEEQLELKIAKAQLEELKKDAVEAMETQKKREEFKDEPAAVDVKTLDIRNFL*