Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0211840 | XP_013442471.1 | 100.000 | 235 | 0 | 0 | 1 | 235 | 1 | 235 | 8.13e-171 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0211840 | sp|O23708|PSA2A_ARATH | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 5.64e-163 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0211840 | I3RZ63 | 100.000 | 235 | 0 | 0 | 1 | 235 | 1 | 235 | 3.88e-171 | 479 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0211840 | 0.824030 | 1.006412e-53 | -8.615850e-47 |
| Msa0008410 | Msa0211840 | 0.822697 | 2.061626e-53 | -8.615850e-47 |
| Msa0018620 | Msa0211840 | 0.801612 | 8.295376e-49 | -8.615850e-47 |
| Msa0032260 | Msa0211840 | 0.823542 | 1.309709e-53 | -8.615850e-47 |
| Msa0033880 | Msa0211840 | 0.810149 | 1.330273e-50 | -8.615850e-47 |
| Msa0055150 | Msa0211840 | 0.800544 | 1.371550e-48 | -8.615850e-47 |
| Msa0057140 | Msa0211840 | 0.838016 | 3.693108e-57 | -8.615850e-47 |
| Msa0064350 | Msa0211840 | 0.833914 | 4.055275e-56 | -8.615850e-47 |
| Msa0064380 | Msa0211840 | 0.833030 | 6.738953e-56 | -8.615850e-47 |
| Msa0073480 | Msa0211840 | 0.800783 | 1.225893e-48 | -8.615850e-47 |
| Msa0076000 | Msa0211840 | 0.831358 | 1.746943e-55 | -8.615850e-47 |
| Msa0076040 | Msa0211840 | 0.831438 | 1.669398e-55 | -8.615850e-47 |
| Msa0077010 | Msa0211840 | 0.825279 | 5.110837e-54 | -8.615850e-47 |
| Msa0082280 | Msa0211840 | 0.876999 | 8.930228e-69 | -8.615850e-47 |
| Msa0097580 | Msa0211840 | 0.815036 | 1.135484e-51 | -8.615850e-47 |
| Msa0097600 | Msa0211840 | 0.808632 | 2.815626e-50 | -8.615850e-47 |
| Msa0115370 | Msa0211840 | 0.808841 | 2.540323e-50 | -8.615850e-47 |
| Msa0121820 | Msa0211840 | 0.826373 | 2.811978e-54 | -8.615850e-47 |
| Msa0127310 | Msa0211840 | 0.810253 | 1.263324e-50 | -8.615850e-47 |
| Msa0127850 | Msa0211840 | 0.816267 | 6.040338e-52 | -8.615850e-47 |
| Msa0128860 | Msa0211840 | 0.805316 | 1.415884e-49 | -8.615850e-47 |
| Msa0131450 | Msa0211840 | 0.808442 | 3.091543e-50 | -8.615850e-47 |
| Msa0149190 | Msa0211840 | 0.819633 | 1.048221e-52 | -8.615850e-47 |
| Msa0155430 | Msa0211840 | 0.867134 | 1.712248e-65 | -8.615850e-47 |
| Msa0165950 | Msa0211840 | 0.847400 | 1.184497e-59 | -8.615850e-47 |
| Msa0166750 | Msa0211840 | 0.848939 | 4.450240e-60 | -8.615850e-47 |
| Msa0167480 | Msa0211840 | 0.803744 | 3.012190e-49 | -8.615850e-47 |
| Msa0174730 | Msa0211840 | 0.804128 | 2.506372e-49 | -8.615850e-47 |
| Msa0174770 | Msa0211840 | 0.880145 | 6.984557e-70 | -8.615850e-47 |
| Msa0181610 | Msa0211840 | 0.845755 | 3.331169e-59 | -8.615850e-47 |
| Msa0186890 | Msa0211840 | 0.804273 | 2.337588e-49 | -8.615850e-47 |
| Msa0187930 | Msa0211840 | 0.835674 | 1.462846e-56 | -8.615850e-47 |
| Msa0191050 | Msa0211840 | 0.805337 | 1.401506e-49 | -8.615850e-47 |
| Msa0194540 | Msa0211840 | 0.832294 | 1.026091e-55 | -8.615850e-47 |
| Msa0199690 | Msa0211840 | 0.866128 | 3.576567e-65 | -8.615850e-47 |
| Msa0199880 | Msa0211840 | 0.803770 | 2.975354e-49 | -8.615850e-47 |
| Msa0211840 | Msa0211860 | 0.805490 | 1.302095e-49 | -8.615850e-47 |
| Msa0211840 | Msa0233350 | 0.807090 | 5.989303e-50 | -8.615850e-47 |
| Msa0211840 | Msa0239450 | 0.823242 | 1.539041e-53 | -8.615850e-47 |
| Msa0211840 | Msa0244780 | 0.840529 | 8.231213e-58 | -8.615850e-47 |
| Msa0211840 | Msa0252410 | 0.812165 | 4.864123e-51 | -8.615850e-47 |
| Msa0211840 | Msa0264570 | 0.810632 | 1.046709e-50 | -8.615850e-47 |
| Msa0211840 | Msa0267970 | 0.831059 | 2.068733e-55 | -8.615850e-47 |
| Msa0211840 | Msa0268130 | 0.831543 | 1.572628e-55 | -8.615850e-47 |
| Msa0211840 | Msa0280430 | 0.867106 | 1.747480e-65 | -8.615850e-47 |
| Msa0211840 | Msa0282890 | 0.804600 | 1.998216e-49 | -8.615850e-47 |
| Msa0211840 | Msa0291520 | 0.876705 | 1.128601e-68 | -8.615850e-47 |
| Msa0211840 | Msa0298990 | 0.832973 | 6.961953e-56 | -8.615850e-47 |
| Msa0211840 | Msa0304590 | 0.821935 | 3.098083e-53 | -8.615850e-47 |
| Msa0211840 | Msa0304660 | 0.812157 | 4.882620e-51 | -8.615850e-47 |
| Msa0211840 | Msa0321170 | 0.801765 | 7.716157e-49 | -8.615850e-47 |
| Msa0211840 | Msa0321190 | 0.804458 | 2.139292e-49 | -8.615850e-47 |
| Msa0211840 | Msa0322890 | 0.813253 | 2.811004e-51 | -8.615850e-47 |
| Msa0211840 | Msa0331700 | 0.812177 | 4.833449e-51 | -8.615850e-47 |
| Msa0211840 | Msa0355270 | 0.835807 | 1.353233e-56 | -8.615850e-47 |
| Msa0211840 | Msa0372670 | 0.803901 | 2.793528e-49 | -8.615850e-47 |
| Msa0211840 | Msa0376690 | 0.823753 | 1.168960e-53 | -8.615850e-47 |
| Msa0211840 | Msa0387730 | 0.804091 | 2.550611e-49 | -8.615850e-47 |
| Msa0211840 | Msa0390030 | 0.803758 | 2.992306e-49 | -8.615850e-47 |
| Msa0211840 | Msa0394400 | 0.819765 | 9.780435e-53 | -8.615850e-47 |
| Msa0211840 | Msa0402330 | 0.844803 | 6.027341e-59 | -8.615850e-47 |
| Msa0211840 | Msa0425220 | 0.816638 | 4.987553e-52 | -8.615850e-47 |
| Msa0211840 | Msa0471590 | 0.824281 | 8.789755e-54 | -8.615850e-47 |
| Msa0211840 | Msa0481480 | 0.854696 | 1.036097e-61 | -8.615850e-47 |
| Msa0211840 | Msa0490820 | 0.823905 | 1.077014e-53 | -8.615850e-47 |
| Msa0211840 | Msa0508630 | 0.813393 | 2.619110e-51 | -8.615850e-47 |
| Msa0211840 | Msa0521050 | 0.805446 | 1.329560e-49 | -8.615850e-47 |
| Msa0211840 | Msa0526540 | 0.826743 | 2.294623e-54 | -8.615850e-47 |
| Msa0211840 | Msa0541860 | 0.804141 | 2.490407e-49 | -8.615850e-47 |
| Msa0211840 | Msa0552810 | 0.842088 | 3.201745e-58 | -8.615850e-47 |
| Msa0211840 | Msa0556790 | 0.804211 | 2.408497e-49 | -8.615850e-47 |
| Msa0211840 | Msa0566700 | 0.818041 | 2.411129e-52 | -8.615850e-47 |
| Msa0211840 | Msa0568470 | 0.823274 | 1.512656e-53 | -8.615850e-47 |
| Msa0211840 | Msa0571920 | 0.806637 | 7.468375e-50 | -8.615850e-47 |
| Msa0211840 | Msa0576940 | 0.833404 | 5.437904e-56 | -8.615850e-47 |
| Msa0211840 | Msa0581070 | 0.863234 | 2.879281e-64 | -8.615850e-47 |
| Msa0211840 | Msa0585960 | 0.812366 | 4.394765e-51 | -8.615850e-47 |
| Msa0211840 | Msa0610390 | 0.811227 | 7.779677e-51 | -8.615850e-47 |
| Msa0211840 | Msa0623700 | 0.815042 | 1.131835e-51 | -8.615850e-47 |
| Msa0211840 | Msa0650920 | 0.814214 | 1.726267e-51 | -8.615850e-47 |
| Msa0211840 | Msa0652300 | 0.800031 | 1.743993e-48 | -8.615850e-47 |
| Msa0211840 | Msa0659030 | 0.843579 | 1.284595e-58 | -8.615850e-47 |
| Msa0211840 | Msa0663900 | 0.825475 | 4.593085e-54 | -8.615850e-47 |
| Msa0211840 | Msa0682780 | 0.816776 | 4.645689e-52 | -8.615850e-47 |
| Msa0211840 | Msa0683780 | 0.810529 | 1.101899e-50 | -8.615850e-47 |
| Msa0211840 | Msa0687630 | 0.853593 | 2.156542e-61 | -8.615850e-47 |
| Msa0211840 | Msa0692840 | 0.810400 | 1.174578e-50 | -8.615850e-47 |
| Msa0211840 | Msa0692940 | 0.840598 | 7.895679e-58 | -8.615850e-47 |
| Msa0211840 | Msa0694840 | 0.814686 | 1.357708e-51 | -8.615850e-47 |
| Msa0211840 | Msa0703230 | 0.804255 | 2.358697e-49 | -8.615850e-47 |
| Msa0211840 | Msa0705000 | 0.841160 | 5.623936e-58 | -8.615850e-47 |
| Msa0211840 | Msa0705040 | 0.853957 | 1.694412e-61 | -8.615850e-47 |
| Msa0211840 | Msa0797120 | 0.806564 | 7.738625e-50 | -8.615850e-47 |
| Msa0211840 | Msa0806920 | 0.802785 | 4.756778e-49 | -8.615850e-47 |
| Msa0211840 | Msa0943170 | 0.809762 | 1.612322e-50 | -8.615850e-47 |
| Msa0211840 | Msa0953150 | 0.807012 | 6.221597e-50 | -8.615850e-47 |
| Msa0211840 | Msa0967370 | 0.820258 | 7.543425e-53 | -8.615850e-47 |
| Msa0211840 | Msa0994290 | 0.830390 | 3.016387e-55 | -8.615850e-47 |
| Msa0211840 | Msa1019240 | 0.819024 | 1.443272e-52 | -8.615850e-47 |
| Msa0211840 | Msa1019260 | 0.820803 | 5.654295e-53 | -8.615850e-47 |
| Msa0211840 | Msa1025940 | 0.814351 | 1.610788e-51 | -8.615850e-47 |
| Msa0211840 | Msa1040890 | 0.801186 | 1.014015e-48 | -8.615850e-47 |
| Msa0211840 | Msa1050210 | 0.826231 | 3.038498e-54 | -8.615850e-47 |
| Msa0211840 | Msa1078270 | 0.807695 | 4.458412e-50 | -8.615850e-47 |
| Msa0211840 | Msa1081150 | 0.802814 | 4.692269e-49 | -8.615850e-47 |
| Msa0211840 | Msa1081560 | 0.811826 | 5.765221e-51 | -8.615850e-47 |
| Msa0211840 | Msa1089840 | 0.814069 | 1.858783e-51 | -8.615850e-47 |
| Msa0211840 | Msa1104210 | 0.805614 | 1.226004e-49 | -8.615850e-47 |
| Msa0211840 | Msa1123500 | 0.803240 | 3.831058e-49 | -8.615850e-47 |
| Msa0211840 | Msa1125500 | 0.864880 | 8.842105e-65 | -8.615850e-47 |
| Msa0211840 | Msa1125580 | 0.829024 | 6.488207e-55 | -8.615850e-47 |
| Msa0211840 | Msa1126510 | 0.847767 | 9.388597e-60 | -8.615850e-47 |
| Msa0211840 | Msa1126770 | 0.865181 | 7.113226e-65 | -8.615850e-47 |
| Msa0211840 | Msa1127890 | 0.821932 | 3.104163e-53 | -8.615850e-47 |
| Msa0211840 | Msa1134110 | 0.800420 | 1.453320e-48 | -8.615850e-47 |
| Msa0211840 | Msa1165870 | 0.809008 | 2.339023e-50 | -8.615850e-47 |
| Msa0211840 | Msa1166410 | 0.808421 | 3.122670e-50 | -8.615850e-47 |
| Msa0211840 | Msa1166860 | 0.855936 | 4.514252e-62 | -8.615850e-47 |
| Msa0211840 | Msa1166870 | 0.817377 | 3.403100e-52 | -8.615850e-47 |
| Msa0211840 | Msa1169770 | 0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0211840 | Msa1179950 | 0.804026 | 2.632350e-49 | -8.615850e-47 |
| Msa0211840 | Msa1179980 | 0.806660 | 7.383344e-50 | -8.615850e-47 |
| Msa0211840 | Msa1184370 | 0.854774 | 9.841369e-62 | -8.615850e-47 |
| Msa0211840 | Msa1201830 | 0.812172 | 4.844902e-51 | -8.615850e-47 |
| Msa0211840 | Msa1218600 | 0.818462 | 1.935868e-52 | -8.615850e-47 |
| Msa0211840 | Msa1227690 | 0.858272 | 9.231302e-63 | -8.615850e-47 |
| Msa0211840 | Msa1234980 | 0.819665 | 1.031013e-52 | -8.615850e-47 |
| Msa0211840 | Msa1254710 | 0.821417 | 4.083419e-53 | -8.615850e-47 |
| Msa0211840 | Msa1255040 | -0.823866 | 1.099607e-53 | -8.615850e-47 |
| Msa0211840 | Msa1257510 | 0.836235 | 1.053800e-56 | -8.615850e-47 |
| Msa0211840 | Msa1269300 | 0.813906 | 2.018643e-51 | -8.615850e-47 |
| Msa0211840 | Msa1282240 | 0.817163 | 3.801841e-52 | -8.615850e-47 |
| Msa0211840 | Msa1283170 | 0.810584 | 1.071901e-50 | -8.615850e-47 |
| Msa0211840 | Msa1294840 | 0.834838 | 2.378277e-56 | -8.615850e-47 |
| Msa0211840 | Msa1295490 | -0.827410 | 1.588541e-54 | -8.615850e-47 |
| Msa0211840 | Msa1304820 | 0.824913 | 6.238489e-54 | -8.615850e-47 |
| Msa0211840 | Msa1306990 | 0.811891 | 5.579205e-51 | -8.615850e-47 |
| Msa0211840 | Msa1307950 | 0.850902 | 1.257590e-60 | -8.615850e-47 |
| Msa0211840 | Msa1310690 | 0.844499 | 7.281370e-59 | -8.615850e-47 |
| Msa0211840 | Msa1316830 | 0.801936 | 7.115402e-49 | -8.615850e-47 |
| Msa0211840 | Msa1344850 | 0.800469 | 1.420271e-48 | -8.615850e-47 |
| Msa0211840 | Msa1345450 | 0.861664 | 8.753330e-64 | -8.615850e-47 |
| Msa0211840 | Msa1356440 | 0.800891 | 1.165055e-48 | -8.615850e-47 |
| Msa0211840 | Msa1363330 | 0.823862 | 1.101852e-53 | -8.615850e-47 |
| Msa0211840 | Msa1365150 | 0.812276 | 4.599587e-51 | -8.615850e-47 |
| Msa0211840 | Msa1367880 | 0.803316 | 3.695189e-49 | -8.615850e-47 |
| Msa0211840 | Msa1369190 | 0.809308 | 2.017526e-50 | -8.615850e-47 |
| Msa0211840 | Msa1370860 | 0.883810 | 3.273217e-71 | -8.615850e-47 |
| Msa0211840 | Msa1379760 | 0.814328 | 1.629062e-51 | -8.615850e-47 |
| Msa0211840 | Msa1386600 | 0.822383 | 2.440084e-53 | -8.615850e-47 |
| Msa0211840 | Msa1387420 | 0.822380 | 2.443373e-53 | -8.615850e-47 |
| Msa0211840 | Msa1397810 | 0.814835 | 1.258571e-51 | -8.615850e-47 |
| Msa0211840 | Msa1404190 | 0.852797 | 3.646034e-61 | -8.615850e-47 |
| Msa0211840 | Msa1442850 | 0.884326 | 2.109788e-71 | -8.615850e-47 |
| Msa0211840 | Msa1448690 | 0.834049 | 3.752460e-56 | -8.615850e-47 |
| Msa0211840 | Msa1450280 | 0.858090 | 1.045566e-62 | -8.615850e-47 |
| Msa0211840 | Msa1456050 | 0.825308 | 5.030831e-54 | -8.615850e-47 |
| Msa0211840 | Msa1462860 | 0.827089 | 1.896387e-54 | -8.615850e-47 |
| Msa0211840 | Msa1465080 | 0.862744 | 4.078369e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0211840 | MtrunA17_Chr0c02g0489661 | 100.000 | 235 | 0 | 0 | 1 | 235 | 1 | 235 | 7.48e-175 | 479 |
| Msa0211840 | MtrunA17_Chr8g0371571 | 38.767 | 227 | 134 | 3 | 4 | 228 | 2 | 225 | 8.69e-52 | 168 |
| Msa0211840 | MtrunA17_Chr2g0308541 | 38.961 | 231 | 136 | 4 | 6 | 231 | 9 | 239 | 9.79e-52 | 168 |
| Msa0211840 | MtrunA17_Chr7g0243311 | 36.752 | 234 | 141 | 4 | 5 | 231 | 4 | 237 | 4.81e-49 | 161 |
| Msa0211840 | MtrunA17_Chr8g0360781 | 38.961 | 231 | 136 | 4 | 6 | 231 | 9 | 239 | 4.06e-48 | 159 |
| Msa0211840 | MtrunA17_Chr1g0210811 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.45e-47 | 157 |
| Msa0211840 | MtrunA17_Chr5g0401801 | 41.270 | 189 | 109 | 2 | 5 | 191 | 4 | 192 | 1.04e-46 | 154 |
| Msa0211840 | MtrunA17_Chr2g0283841 | 37.445 | 227 | 137 | 3 | 4 | 228 | 2 | 225 | 1.85e-46 | 154 |
| Msa0211840 | MtrunA17_Chr1g0155371 | 35.111 | 225 | 141 | 3 | 1 | 222 | 1 | 223 | 1.41e-41 | 143 |
| Msa0211840 | MtrunA17_Chr6g0459741 | 36.612 | 183 | 116 | 0 | 6 | 188 | 8 | 190 | 3.43e-39 | 135 |
| Msa0211840 | MtrunA17_Chr4g0004521 | 31.336 | 217 | 130 | 5 | 20 | 222 | 7 | 218 | 2.11e-27 | 105 |
| Msa0211840 | MtrunA17_Chr4g0027841 | 27.897 | 233 | 156 | 7 | 9 | 234 | 91 | 318 | 3.71e-17 | 79.0 |
| Msa0211840 | MtrunA17_Chr6g0453891 | 28.571 | 189 | 123 | 4 | 32 | 214 | 136 | 318 | 7.02e-14 | 69.7 |
| Msa0211840 | MtrunA17_Chr3g0142511 | 32.692 | 104 | 67 | 2 | 122 | 222 | 30 | 133 | 3.45e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0211840 | AT1G16470.1 | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 5.73e-164 | 452 |
| Msa0211840 | AT1G16470.2 | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 5.73e-164 | 452 |
| Msa0211840 | AT1G79210.1 | 93.191 | 235 | 16 | 0 | 1 | 235 | 1 | 235 | 1.07e-162 | 449 |
| Msa0211840 | AT1G79210.2 | 93.191 | 235 | 16 | 0 | 1 | 235 | 1 | 235 | 1.07e-162 | 449 |
| Msa0211840 | AT1G79210.3 | 93.191 | 235 | 16 | 0 | 1 | 235 | 1 | 235 | 1.07e-162 | 449 |
| Msa0211840 | AT5G66140.1 | 39.035 | 228 | 133 | 4 | 4 | 228 | 2 | 226 | 3.97e-50 | 164 |
| Msa0211840 | AT3G51260.1 | 38.596 | 228 | 134 | 4 | 4 | 228 | 2 | 226 | 9.19e-49 | 160 |
| Msa0211840 | AT3G51260.2 | 39.623 | 212 | 123 | 3 | 4 | 213 | 2 | 210 | 1.66e-48 | 160 |
| Msa0211840 | AT1G53850.1 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.68e-47 | 157 |
| Msa0211840 | AT1G53850.2 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.68e-47 | 157 |
| Msa0211840 | AT3G14290.1 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 3.61e-47 | 156 |
| Msa0211840 | AT5G35590.1 | 37.229 | 231 | 140 | 4 | 6 | 231 | 9 | 239 | 3.87e-47 | 156 |
| Msa0211840 | AT3G22110.1 | 36.245 | 229 | 136 | 4 | 5 | 230 | 4 | 225 | 2.33e-46 | 154 |
| Msa0211840 | AT2G05840.1 | 35.931 | 231 | 143 | 4 | 6 | 231 | 9 | 239 | 1.97e-44 | 149 |
| Msa0211840 | AT5G42790.1 | 36.444 | 225 | 138 | 3 | 1 | 222 | 1 | 223 | 3.11e-42 | 145 |
| Msa0211840 | AT1G47250.1 | 34.034 | 238 | 152 | 3 | 1 | 235 | 1 | 236 | 1.77e-40 | 140 |
| Msa0211840 | AT2G05840.2 | 34.928 | 209 | 132 | 3 | 6 | 210 | 9 | 217 | 2.01e-38 | 133 |
| Msa0211840 | AT2G27020.1 | 32.710 | 214 | 143 | 1 | 6 | 218 | 8 | 221 | 3.17e-36 | 128 |
| Msa0211840 | AT2G05840.3 | 35.955 | 178 | 112 | 2 | 6 | 181 | 9 | 186 | 4.59e-35 | 124 |
| Msa0211840 | AT2G27020.2 | 32.710 | 214 | 143 | 1 | 6 | 218 | 110 | 323 | 5.52e-35 | 127 |
| Msa0211840 | AT4G15165.1 | 26.754 | 228 | 117 | 4 | 5 | 230 | 4 | 183 | 3.44e-23 | 93.6 |
Find 72 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGAAATTGATGATTATT+TGG | 0.158426 | 2_1:+53477294 | Msa0211840:CDS |
| GGAGTGTCCCTGCTTGTTGC+TGG | 0.253157 | 2_1:+53475252 | Msa0211840:CDS |
| GCTTTAACTGCTGTTGGTTC+TGG | 0.266268 | 2_1:+53471223 | Msa0211840:CDS |
| AATCAAATCAAATCAAATAA+TGG | 0.275157 | 2_1:+53471132 | Msa0211840:exon |
| GGGTCCTGATTTCCGAGTTT+TGG | 0.297847 | 2_1:+53473980 | Msa0211840:CDS |
| CTGTATACAACACCTATATT+TGG | 0.326037 | 2_1:-53473291 | None:intergenic |
| CCCTTCCTTCAGTGTCAATA+TGG | 0.330202 | 2_1:-53475772 | None:intergenic |
| GAAGAAACTGCCATCTATAT+TGG | 0.337394 | 2_1:+53472818 | Msa0211840:CDS |
| GATAGTGGTGTTAGGCCATT+TGG | 0.346954 | 2_1:+53475231 | Msa0211840:intron |
| GTTGCTGGGTTTGATGATAA+TGG | 0.347033 | 2_1:+53475267 | Msa0211840:CDS |
| TCTTTCTCTTTCTAATTCTC+AGG | 0.350020 | 2_1:+53470967 | Msa0211840:five_prime_UTR |
| ATGCAGGAATTTACTCAGTC+TGG | 0.352073 | 2_1:+53474534 | Msa0211840:CDS |
| TTTGCCCTGATAGTGGTGTT+AGG | 0.363096 | 2_1:+53475223 | Msa0211840:intron |
| TGAATGTAGGGTTGTTTGTA+AGG | 0.366695 | 2_1:+53471092 | Msa0211840:intron |
| AACATTGAAATCGGCATCAT+TGG | 0.369450 | 2_1:+53476351 | Msa0211840:CDS |
| TTGTAGATACACTGATGATA+TGG | 0.375486 | 2_1:+53475725 | Msa0211840:intron |
| CGAACCAAAACTCGGAAATC+AGG | 0.376290 | 2_1:-53473984 | None:intergenic |
| ATCAAATCAAATCAAATAAT+GGG | 0.376680 | 2_1:+53471133 | Msa0211840:exon |
| CAAATATAGGTGTTGTATAC+AGG | 0.377485 | 2_1:+53473292 | Msa0211840:CDS |
| GCAGTATCACCGATTGTATA+AGG | 0.400018 | 2_1:+53474028 | Msa0211840:CDS |
| GCTGAAATTGATGATTATTT+GGG | 0.402207 | 2_1:+53477295 | Msa0211840:CDS |
| TTGGCATTTCCCAGGTTTGA+GGG | 0.418418 | 2_1:+53476312 | Msa0211840:intron |
| TTAAACAAGCTGGATTTGTA+TGG | 0.418939 | 2_1:-53477514 | None:intergenic |
| TAATGGACCACAACTATATC+AGG | 0.419917 | 2_1:+53475284 | Msa0211840:CDS |
| TTGCTGTAGGTGGATCCATC+AGG | 0.428961 | 2_1:+53475439 | Msa0211840:intron |
| ATGAAATAAACACCAACTTC+GGG | 0.429484 | 2_1:-53477360 | None:intergenic |
| GAGTGTCCCTGCTTGTTGCT+GGG | 0.436297 | 2_1:+53475253 | Msa0211840:CDS |
| TTGGTTCTTGCAGCTGCAAA+TGG | 0.438100 | 2_1:+53472777 | Msa0211840:intron |
| AGAAAGAGAAAGAGGAAGAA+TGG | 0.441637 | 2_1:-53470957 | None:intergenic |
| GCTTCATCAACCAATATAGA+TGG | 0.444983 | 2_1:-53472828 | None:intergenic |
| CAGTTATTAACACCAAATAT+AGG | 0.451124 | 2_1:+53473279 | Msa0211840:CDS |
| TCTTGGAAAGCTTCTGCTAT+GGG | 0.454997 | 2_1:+53475472 | Msa0211840:CDS |
| TATCATATATTTAAACAAGC+TGG | 0.460852 | 2_1:-53477524 | None:intergenic |
| ACTGAGCGTAGATGTAAGTC+AGG | 0.461150 | 2_1:-53470904 | None:intergenic |
| ACAAGTTGAGTGACAGGGAT+TGG | 0.466755 | 2_1:-53474492 | None:intergenic |
| TTCTTGGAAAGCTTCTGCTA+TGG | 0.473689 | 2_1:+53475471 | Msa0211840:CDS |
| GAACATGCTTTAACTGCTGT+TGG | 0.482096 | 2_1:+53471217 | Msa0211840:CDS |
| TATGAAATAAACACCAACTT+CGG | 0.486995 | 2_1:-53477361 | None:intergenic |
| TCCCTCACAAGTTGAGTGAC+AGG | 0.493790 | 2_1:-53474498 | None:intergenic |
| TTTGGTGTACCTTATACAAT+CGG | 0.497296 | 2_1:-53474037 | None:intergenic |
| TGAGAATTAGAAAGAGAAAG+AGG | 0.497959 | 2_1:-53470965 | None:intergenic |
| AGTTTAATTGAATTTCAAGA+TGG | 0.499567 | 2_1:+53477388 | Msa0211840:three_prime_UTR |
| GTTGGCATTTCCCAGGTTTG+AGG | 0.504319 | 2_1:+53476311 | Msa0211840:intron |
| CATCCTTGTGCTCCCGAAGT+TGG | 0.506763 | 2_1:+53477348 | Msa0211840:three_prime_UTR |
| CTAAGACATTTCTTGAGAAG+AGG | 0.508140 | 2_1:+53475512 | Msa0211840:CDS |
| CATCAAACCCAGCAACAAGC+AGG | 0.525359 | 2_1:-53475260 | None:intergenic |
| GGTTCTGGACAAACTTCTCT+CGG | 0.526164 | 2_1:+53471238 | Msa0211840:CDS |
| CAAACTTCTCTCGGTATCAA+AGG | 0.527227 | 2_1:+53471247 | Msa0211840:CDS |
| CCCTGTCACTCAACTTGTGA+GGG | 0.529229 | 2_1:+53474497 | Msa0211840:CDS |
| GTTTAATTGAATTTCAAGAT+GGG | 0.536767 | 2_1:+53477389 | Msa0211840:three_prime_UTR |
| AAATAATCATCAATTTCAGC+TGG | 0.537679 | 2_1:-53477292 | None:intergenic |
| TGCAGGAATTTACTCAGTCT+GGG | 0.542143 | 2_1:+53474535 | Msa0211840:CDS |
| TATTGTGTTGTGTTGTGTTG+TGG | 0.551813 | 2_1:-53470930 | None:intergenic |
| GCCATATTGACACTGAAGGA+AGG | 0.565690 | 2_1:+53475771 | Msa0211840:CDS |
| CAACTTCGGGAGCACAAGGA+TGG | 0.568897 | 2_1:-53477347 | None:intergenic |
| ACAAGCAGGGACACTCCAAA+TGG | 0.570540 | 2_1:-53475246 | None:intergenic |
| CCCTCACAAGTTGAGTGACA+GGG | 0.583404 | 2_1:-53474497 | None:intergenic |
| GGAAGTTGCTGCTGTCATGC+AGG | 0.583748 | 2_1:+53474518 | Msa0211840:CDS |
| ACACCAACTTCGGGAGCACA+AGG | 0.595228 | 2_1:-53477351 | None:intergenic |
| TGCCATACCTGATATAGTTG+TGG | 0.596286 | 2_1:-53475291 | None:intergenic |
| ATCAAACCCAGCAACAAGCA+GGG | 0.606489 | 2_1:-53475259 | None:intergenic |
| TCCCTGTCACTCAACTTGTG+AGG | 0.608754 | 2_1:+53474496 | Msa0211840:CDS |
| CCATATTGACACTGAAGGAA+GGG | 0.609464 | 2_1:+53475772 | Msa0211840:CDS |
| CACAGCCATATTGACACTGA+AGG | 0.611228 | 2_1:+53475767 | Msa0211840:CDS |
| CTTGGAAAGCTTCTGCTATG+GGG | 0.618178 | 2_1:+53475473 | Msa0211840:CDS |
| ATCTGAACAAGCTTACCAGA+AGG | 0.620962 | 2_1:-53471193 | None:intergenic |
| TAAGTCAGGGAAGAATGAGT+AGG | 0.625838 | 2_1:-53470890 | None:intergenic |
| ATGAAGACTTGTGATGGCAC+TGG | 0.627971 | 2_1:+53477419 | Msa0211840:three_prime_UTR |
| AGATGGCAGTTTCTTCTCTG+TGG | 0.628548 | 2_1:-53472811 | None:intergenic |
| TGATGAATGAAGACTTGTGA+TGG | 0.639717 | 2_1:+53477413 | Msa0211840:three_prime_UTR |
| TCAGTGTCAATATGGCTGTG+TGG | 0.671904 | 2_1:-53475764 | None:intergenic |
| CTGAGCGTAGATGTAAGTCA+GGG | 0.683179 | 2_1:-53470903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTTTATATATATTTT+TGG | + | chr2_1:53471712-53471731 | Msa0211840:intron | 0.0% |
| !!! | TTTTTTTGTAACTATATTTT+TGG | + | chr2_1:53472758-53472777 | Msa0211840:intron | 10.0% |
| !! | AAATAAACAAAAATTAGATA+AGG | - | chr2_1:53472993-53473012 | None:intergenic | 10.0% |
| !!! | TATCTAATTTTTGTTTATTT+TGG | + | chr2_1:53472993-53473012 | Msa0211840:intron | 10.0% |
| !!! | TTTATTTTATTTTTTGTGAT+GGG | - | chr2_1:53474668-53474687 | None:intergenic | 10.0% |
| !!! | TTTTATTTTATTTTTTGTGA+TGG | - | chr2_1:53474669-53474688 | None:intergenic | 10.0% |
| !! | AATATTCAAATGATAATAAA+GGG | - | chr2_1:53475191-53475210 | None:intergenic | 10.0% |
| !! | TAATATTCAAATGATAATAA+AGG | - | chr2_1:53475192-53475211 | None:intergenic | 10.0% |
| !!! | TAAATATGATATTTTCATTA+AGG | - | chr2_1:53475834-53475853 | None:intergenic | 10.0% |
| !! | AATCAAATCAAATCAAATAA+TGG | + | chr2_1:53471132-53471151 | Msa0211840:exon | 15.0% |
| !! | ATCAAATCAAATCAAATAAT+GGG | + | chr2_1:53471133-53471152 | Msa0211840:exon | 15.0% |
| !!! | TATTTCAATGTATTAGTTTA+AGG | + | chr2_1:53471331-53471350 | Msa0211840:intron | 15.0% |
| !!! | TTTTATTTAGTTTATGTTGT+CGG | + | chr2_1:53471520-53471539 | Msa0211840:intron | 15.0% |
| !! | NNNNNNNACTGCTATTATAT+AGG | + | chr2_1:53471841-53471860 | Msa0211840:intron | 15.0% |
| !! | NNNNNNACTGCTATTATATA+GGG | + | chr2_1:53471842-53471861 | Msa0211840:intron | 15.0% |
| !!! | ATAAAATTTTGTTCTATCAA+TGG | - | chr2_1:53473124-53473143 | None:intergenic | 15.0% |
| !!! | TTTATCGTTTAAATTTTACT+TGG | + | chr2_1:53474164-53474183 | Msa0211840:intron | 15.0% |
| !! | AAGGAAAAAGAAAATATTTA+AGG | - | chr2_1:53474283-53474302 | None:intergenic | 15.0% |
| !! | AAACACAAATAAAAAGTAAA+CGG | - | chr2_1:53474318-53474337 | None:intergenic | 15.0% |
| !! | ATATTCAAATGATAATAAAG+GGG | - | chr2_1:53475190-53475209 | None:intergenic | 15.0% |
| !! | ATTACATTAATCTCTAATAA+TGG | - | chr2_1:53475618-53475637 | None:intergenic | 15.0% |
| !! | AAATAAACAAATACTGAAAA+GGG | - | chr2_1:53476452-53476471 | None:intergenic | 15.0% |
| !!! | AATTAAAAGGTATAAATTTG+AGG | + | chr2_1:53476547-53476566 | Msa0211840:intron | 15.0% |
| !! | ATATATGTTGCATAATTTAA+AGG | - | chr2_1:53476993-53477012 | None:intergenic | 15.0% |
| !!! | TATGCAACATATATTTTTAA+TGG | + | chr2_1:53476999-53477018 | Msa0211840:intron | 15.0% |
| !!! | TTTTTTTTCTTATTTTTTGC+TGG | + | chr2_1:53477164-53477183 | Msa0211840:intron | 15.0% |
| !! | AAACAAGAGAAAGTAATAAT+GGG | - | chr2_1:53471013-53471032 | None:intergenic | 20.0% |
| !!! | CATGTTATTTAACAATACAA+AGG | - | chr2_1:53471060-53471079 | None:intergenic | 20.0% |
| !! | AGCAATTGAAAATAAAGAAA+GGG | - | chr2_1:53471309-53471328 | None:intergenic | 20.0% |
| !! | AAGCAATTGAAAATAAAGAA+AGG | - | chr2_1:53471310-53471329 | None:intergenic | 20.0% |
| !! | CAAAGAATAAATTATTCAGA+CGG | - | chr2_1:53471901-53471920 | None:intergenic | 20.0% |
| !! | ATTCTTTGATGTAAATATCT+TGG | + | chr2_1:53471913-53471932 | Msa0211840:intron | 20.0% |
| !! | TCTATGCTAAAACTAAAATA+TGG | + | chr2_1:53472183-53472202 | Msa0211840:intron | 20.0% |
| !! | CTATGCTAAAACTAAAATAT+GGG | + | chr2_1:53472184-53472203 | Msa0211840:intron | 20.0% |
| !!! | GTGTTAATAACTGAATTTTT+TGG | - | chr2_1:53473272-53473291 | None:intergenic | 20.0% |
| !!! | ATATTTTCTTTTTCCTTTTC+TGG | + | chr2_1:53474286-53474305 | Msa0211840:intron | 20.0% |
| !!! | TATCTTTTGGTTTTCTATTA+TGG | + | chr2_1:53474418-53474437 | Msa0211840:intron | 20.0% |
| !! | TAACATAAAACTTATATGCT+GGG | - | chr2_1:53474627-53474646 | None:intergenic | 20.0% |
| !! | ATAACATAAAACTTATATGC+TGG | - | chr2_1:53474628-53474647 | None:intergenic | 20.0% |
| !!! | AAGTTTGAAATGAGTTTAAA+AGG | + | chr2_1:53474932-53474951 | Msa0211840:intron | 20.0% |
| !!! | TTTAATTTTTATGCAACTGT+TGG | + | chr2_1:53475030-53475049 | Msa0211840:intron | 20.0% |
| !!! | TTAATTTTTATGCAACTGTT+GGG | + | chr2_1:53475031-53475050 | Msa0211840:intron | 20.0% |
| !!! | TTCGTTGCATTTTATATTTA+GGG | - | chr2_1:53475108-53475127 | None:intergenic | 20.0% |
| !!! | TTAAAGTTACTGTACTTTTA+AGG | + | chr2_1:53475387-53475406 | Msa0211840:intron | 20.0% |
| !!! | TAAAGTTACTGTACTTTTAA+GGG | + | chr2_1:53475388-53475407 | Msa0211840:intron | 20.0% |
| !!! | TTTAATTCTTAGAGTTGATT+AGG | + | chr2_1:53475850-53475869 | Msa0211840:intron | 20.0% |
| !!! | CATTTTATAATTCTGAAACA+TGG | - | chr2_1:53475956-53475975 | None:intergenic | 20.0% |
| !! | CATGTTTCAGAATTATAAAA+TGG | + | chr2_1:53475954-53475973 | Msa0211840:intron | 20.0% |
| !! | AAATTTCTTATTAGTGATCT+TGG | + | chr2_1:53476055-53476074 | Msa0211840:intron | 20.0% |
| !! | GAAACAAACAACATAAAAAA+TGG | - | chr2_1:53476208-53476227 | None:intergenic | 20.0% |
| !! | GAAAAGAATTAAAAAGAAAG+AGG | - | chr2_1:53476230-53476249 | None:intergenic | 20.0% |
| !! | CCAAAAGAAAAAAAAATATC+CGG | + | chr2_1:53476257-53476276 | Msa0211840:intron | 20.0% |
| !! | AATAAACAAATACTGAAAAG+GGG | - | chr2_1:53476451-53476470 | None:intergenic | 20.0% |
| !! | CAAATAAACAAATACTGAAA+AGG | - | chr2_1:53476453-53476472 | None:intergenic | 20.0% |
| !!! | AATTTTTAGCTCAATTTGAT+CGG | - | chr2_1:53476502-53476521 | None:intergenic | 20.0% |
| !! | ATCCAATCTGAATAATTAAA+AGG | + | chr2_1:53476534-53476553 | Msa0211840:intron | 20.0% |
| !!! | TACCTTTTAATTATTCAGAT+TGG | - | chr2_1:53476539-53476558 | None:intergenic | 20.0% |
| !! | AGTTACTGAAATGAATATTA+TGG | + | chr2_1:53476600-53476619 | Msa0211840:intron | 20.0% |
| !!! | ATCAGAGTCTTAATATTTTT+GGG | - | chr2_1:53477082-53477101 | None:intergenic | 20.0% |
| !!! | TAGTTTGTTAATTATATTGC+AGG | + | chr2_1:53477260-53477279 | Msa0211840:intron | 20.0% |
| !!! | AGTTTGTTAATTATATTGCA+GGG | + | chr2_1:53477261-53477280 | Msa0211840:intron | 20.0% |
| !! | AGTTTAATTGAATTTCAAGA+TGG | + | chr2_1:53477388-53477407 | Msa0211840:three_prime_UTR | 20.0% |
| !! | GTTTAATTGAATTTCAAGAT+GGG | + | chr2_1:53477389-53477408 | Msa0211840:three_prime_UTR | 20.0% |
| !!! | TTAGATAAAAGTTTTTCAGA+AGG | - | chr2_1:53477480-53477499 | None:intergenic | 20.0% |
| ! | GAAACAAGAGAAAGTAATAA+TGG | - | chr2_1:53471014-53471033 | None:intergenic | 25.0% |
| !! | TGTTTTCGATTTTGAATGTA+GGG | + | chr2_1:53471080-53471099 | Msa0211840:intron | 25.0% |
| ! | ATTGAAAATAAAGAAAGGGT+TGG | - | chr2_1:53471305-53471324 | None:intergenic | 25.0% |
| !! | TTTTCTACTGATACATTACT+AGG | + | chr2_1:53471378-53471397 | Msa0211840:intron | 25.0% |
| ! | TTTCTACTGATACATTACTA+GGG | + | chr2_1:53471379-53471398 | Msa0211840:intron | 25.0% |
| ! | GGGATTTAGATTGTAAATTT+CGG | + | chr2_1:53471406-53471425 | Msa0211840:intron | 25.0% |
| !! | AATGAAAACACTCTTGATTT+TGG | - | chr2_1:53471602-53471621 | None:intergenic | 25.0% |
| ! | GAACAGGTAGAATTAAAATT+AGG | - | chr2_1:53472031-53472050 | None:intergenic | 25.0% |
| ! | ATATTAATCTACCTGTTCAT+CGG | - | chr2_1:53472079-53472098 | None:intergenic | 25.0% |
| ! | TAATAGCTACAGATTTGAAT+TGG | - | chr2_1:53472109-53472128 | None:intergenic | 25.0% |
| !!! | TTTTTCCTTATTAGAAGCAT+GGG | + | chr2_1:53472337-53472356 | Msa0211840:intron | 25.0% |
| ! | AGAGGATATTTGCAAATAAA+TGG | - | chr2_1:53472623-53472642 | None:intergenic | 25.0% |
| ! | ACAAATTGCAGAAATAATAG+AGG | - | chr2_1:53472641-53472660 | None:intergenic | 25.0% |
| !!! | TTTCTAACTTTGATTTTGTG+TGG | + | chr2_1:53472668-53472687 | Msa0211840:intron | 25.0% |
| ! | GTTTATCTAATAATCCTTCT+CGG | + | chr2_1:53473015-53473034 | Msa0211840:intron | 25.0% |
| ! | ATTCAAGATTTCATACATTC+TGG | + | chr2_1:53473214-53473233 | Msa0211840:intron | 25.0% |
| ! | CAGTTATTAACACCAAATAT+AGG | + | chr2_1:53473279-53473298 | Msa0211840:CDS | 25.0% |
| ! | TAAGTTCAAACATGTTTGTA+TGG | + | chr2_1:53473345-53473364 | Msa0211840:intron | 25.0% |
| ! | GTGATATTTGCTTCATATTA+TGG | + | chr2_1:53473388-53473407 | Msa0211840:intron | 25.0% |
| !! | TCTTTCATTTCATTTTGTCT+GGG | - | chr2_1:53473479-53473498 | None:intergenic | 25.0% |
| !! | TTCTTTCATTTCATTTTGTC+TGG | - | chr2_1:53473480-53473499 | None:intergenic | 25.0% |
| ! | TCAATAGTTTATCTCTTACA+AGG | - | chr2_1:53473791-53473810 | None:intergenic | 25.0% |
| !!! | TCAATTTTGTTTTTGTTCAG+TGG | + | chr2_1:53473954-53473973 | Msa0211840:intron | 25.0% |
| ! | GAATATTGCAATACATAGTT+TGG | - | chr2_1:53474058-53474077 | None:intergenic | 25.0% |
| ! | GAATCATATAGACCAAATAT+AGG | - | chr2_1:53474096-53474115 | None:intergenic | 25.0% |
| ! | TTACAAGCAATAGGAAATAA+AGG | - | chr2_1:53474218-53474237 | None:intergenic | 25.0% |
| !! | TTGTCTTTTCTGTTATCTTT+TGG | + | chr2_1:53474405-53474424 | Msa0211840:intron | 25.0% |
| !!! | TTTTATTTTTTGTGATGGGA+GGG | - | chr2_1:53474664-53474683 | None:intergenic | 25.0% |
| !!! | ATTTTATTTTTTGTGATGGG+AGG | - | chr2_1:53474665-53474684 | None:intergenic | 25.0% |
| !!! | ACTTTGAAAAGCATCAAAAT+GGG | - | chr2_1:53474832-53474851 | None:intergenic | 25.0% |
| !!! | AACTTTGAAAAGCATCAAAA+TGG | - | chr2_1:53474833-53474852 | None:intergenic | 25.0% |
| ! | TTAACATATGATGATAATCG+AGG | - | chr2_1:53474909-53474928 | None:intergenic | 25.0% |
| ! | TCGATTATCATCATATGTTA+AGG | + | chr2_1:53474908-53474927 | Msa0211840:intron | 25.0% |
| ! | CGATTATCATCATATGTTAA+GGG | + | chr2_1:53474909-53474928 | Msa0211840:intron | 25.0% |
| ! | AAATACACATTCTTTCAGAA+AGG | - | chr2_1:53474986-53475005 | None:intergenic | 25.0% |
| !! | TTTCTGAAAGAATGTGTATT+TGG | + | chr2_1:53474985-53475004 | Msa0211840:intron | 25.0% |
| !! | TTCTGAAAGAATGTGTATTT+GGG | + | chr2_1:53474986-53475005 | Msa0211840:intron | 25.0% |
| !! | GATAAACATTTTGTTCCTAT+TGG | + | chr2_1:53475067-53475086 | Msa0211840:intron | 25.0% |
| ! | TTATATTTAGGGGTTCATTA+TGG | - | chr2_1:53475097-53475116 | None:intergenic | 25.0% |
| !! | TCGTTGCATTTTATATTTAG+GGG | - | chr2_1:53475107-53475126 | None:intergenic | 25.0% |
| !! | GTTCGTTGCATTTTATATTT+AGG | - | chr2_1:53475109-53475128 | None:intergenic | 25.0% |
| ! | TTGTGTGTATAAAAAAGAGT+CGG | - | chr2_1:53475145-53475164 | None:intergenic | 25.0% |
| !! | ATTAATGATGGCAATGTTTT+AGG | + | chr2_1:53475546-53475565 | Msa0211840:intron | 25.0% |
| ! | TTTAATGCATAAACGTTACA+CGG | - | chr2_1:53475808-53475827 | None:intergenic | 25.0% |
| ! | AGAAATAAACACACAAAAAC+TGG | - | chr2_1:53475886-53475905 | None:intergenic | 25.0% |
| ! | TTTATCATACACTAATTGAC+AGG | - | chr2_1:53475931-53475950 | None:intergenic | 25.0% |
| ! | ACATAAAAAATGGCAATGAA+GGG | - | chr2_1:53476198-53476217 | None:intergenic | 25.0% |
| ! | AACATAAAAAATGGCAATGA+AGG | - | chr2_1:53476199-53476218 | None:intergenic | 25.0% |
| !!! | CCGGATATTTTTTTTTCTTT+TGG | - | chr2_1:53476260-53476279 | None:intergenic | 25.0% |
| ! | TTAGTTTCAAAGACTAACAA+AGG | - | chr2_1:53476283-53476302 | None:intergenic | 25.0% |
| ! | TCAGCAAAAAACATTGAAAT+CGG | + | chr2_1:53476342-53476361 | Msa0211840:CDS | 25.0% |
| ! | TTGTTCCCTAAAATATACTT+TGG | + | chr2_1:53476402-53476421 | Msa0211840:intron | 25.0% |
| ! | ATAAACAAATACTGAAAAGG+GGG | - | chr2_1:53476450-53476469 | None:intergenic | 25.0% |
| ! | TATTTGAACTTTGTATCATC+TGG | + | chr2_1:53476467-53476486 | Msa0211840:intron | 25.0% |
| ! | TTGAGCTAAAAATTATGCTA+TGG | + | chr2_1:53476508-53476527 | Msa0211840:intron | 25.0% |
| ! | TGAGCTAAAAATTATGCTAT+GGG | + | chr2_1:53476509-53476528 | Msa0211840:intron | 25.0% |
| !!! | GCAACATATATTTTTAATGG+AGG | + | chr2_1:53477002-53477021 | Msa0211840:intron | 25.0% |
| !! | GATCAGAGTCTTAATATTTT+TGG | - | chr2_1:53477083-53477102 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTACCAATGCAAA+TGG | + | chr2_1:53477109-53477128 | Msa0211840:intron | 25.0% |
| !!! | TTTTTCTTATTTTTTGCTGG+TGG | + | chr2_1:53477167-53477186 | Msa0211840:intron | 25.0% |
| !!! | TTTTCTTATTTTTTGCTGGT+GGG | + | chr2_1:53477168-53477187 | Msa0211840:intron | 25.0% |
| !!! | TTTGTTTTGAATACCTGATT+TGG | + | chr2_1:53477229-53477248 | Msa0211840:intron | 25.0% |
| ! | AACTATTAAGTTACCAAATC+AGG | - | chr2_1:53477245-53477264 | None:intergenic | 25.0% |
| ! | AAATAATCATCAATTTCAGC+TGG | - | chr2_1:53477295-53477314 | None:intergenic | 25.0% |
| !! | AGCTGAAATTGATGATTATT+TGG | + | chr2_1:53477294-53477313 | Msa0211840:CDS | 25.0% |
| !! | GCTGAAATTGATGATTATTT+GGG | + | chr2_1:53477295-53477314 | Msa0211840:CDS | 25.0% |
| ! | TATGAAATAAACACCAACTT+CGG | - | chr2_1:53477364-53477383 | None:intergenic | 25.0% |
| TGAGAATTAGAAAGAGAAAG+AGG | - | chr2_1:53470968-53470987 | None:intergenic | 30.0% | |
| TCTTTCTCTTTCTAATTCTC+AGG | + | chr2_1:53470967-53470986 | Msa0211840:five_prime_UTR | 30.0% | |
| ! | AGTAATAATGGGAAAAACGA+AGG | - | chr2_1:53471002-53471021 | None:intergenic | 30.0% |
| ! | GTGTTTTCGATTTTGAATGT+AGG | + | chr2_1:53471079-53471098 | Msa0211840:intron | 30.0% |
| TGATACATTACTAGGGTTTA+GGG | + | chr2_1:53471386-53471405 | Msa0211840:intron | 30.0% | |
| !! | CATTTGTTTCGCATTTTGAT+AGG | + | chr2_1:53471618-53471637 | Msa0211840:intron | 30.0% |
| AGAAATGTAATCGCAGAAAT+CGG | - | chr2_1:53471681-53471700 | None:intergenic | 30.0% | |
| ! | AGTTCAAGTTTCATCATCAT+CGG | - | chr2_1:53471871-53471890 | None:intergenic | 30.0% |
| TATTAATCTACCTGTTCATC+GGG | - | chr2_1:53472078-53472097 | None:intergenic | 30.0% | |
| AAATCCACAAATCAAATCAG+TGG | + | chr2_1:53472250-53472269 | Msa0211840:intron | 30.0% | |
| ! | CTTTTTCCTTATTAGAAGCA+TGG | + | chr2_1:53472336-53472355 | Msa0211840:intron | 30.0% |
| ATGCTTCAGTACTATCATAT+TGG | + | chr2_1:53472567-53472586 | Msa0211840:intron | 30.0% | |
| ! | AACTTGTTCATATTGCACAT+AGG | + | chr2_1:53472593-53472612 | Msa0211840:intron | 30.0% |
| !!! | TCAGTAAGTTGCTTTTTCTT+TGG | + | chr2_1:53472852-53472871 | Msa0211840:intron | 30.0% |
| AATTGGATACAATCTTGAAG+TGG | - | chr2_1:53472925-53472944 | None:intergenic | 30.0% | |
| CTTCAAGATTGTATCCAATT+TGG | + | chr2_1:53472925-53472944 | Msa0211840:intron | 30.0% | |
| AGGATGCTGAGTAATTTAAA+GGG | - | chr2_1:53472973-53472992 | None:intergenic | 30.0% | |
| AAGGATGCTGAGTAATTTAA+AGG | - | chr2_1:53472974-53472993 | None:intergenic | 30.0% | |
| TTCTTATATCGTGATAGTTG+AGG | + | chr2_1:53473074-53473093 | Msa0211840:intron | 30.0% | |
| CTGTATACAACACCTATATT+TGG | - | chr2_1:53473294-53473313 | None:intergenic | 30.0% | |
| ! | CAAATATAGGTGTTGTATAC+AGG | + | chr2_1:53473292-53473311 | Msa0211840:CDS | 30.0% |
| !!! | TGATGGTTGAGTTTTGAATA+TGG | + | chr2_1:53473415-53473434 | Msa0211840:intron | 30.0% |
| ACATAGCTGAATTATATCCA+AGG | + | chr2_1:53473547-53473566 | Msa0211840:intron | 30.0% | |
| CATAGCTGAATTATATCCAA+GGG | + | chr2_1:53473548-53473567 | Msa0211840:intron | 30.0% | |
| TGATGAGTTAGATAAATAGG+GGG | - | chr2_1:53473648-53473667 | None:intergenic | 30.0% | |
| GTGATGAGTTAGATAAATAG+GGG | - | chr2_1:53473649-53473668 | None:intergenic | 30.0% | |
| GGTGATGAGTTAGATAAATA+GGG | - | chr2_1:53473650-53473669 | None:intergenic | 30.0% | |
| AGGTGATGAGTTAGATAAAT+AGG | - | chr2_1:53473651-53473670 | None:intergenic | 30.0% | |
| ATTCTGTGAAAACTGTTTCA+AGG | - | chr2_1:53473709-53473728 | None:intergenic | 30.0% | |
| ! | TTTGGTGTACCTTATACAAT+CGG | - | chr2_1:53474040-53474059 | None:intergenic | 30.0% |
| AATATCAAATTCCGAAGTAC+AGG | - | chr2_1:53474135-53474154 | None:intergenic | 30.0% | |
| TGTACTTCGGAATTTGATAT+TGG | + | chr2_1:53474134-53474153 | Msa0211840:intron | 30.0% | |
| TTCGGAATTTGATATTGGAA+TGG | + | chr2_1:53474139-53474158 | Msa0211840:intron | 30.0% | |
| GCAATAGGAAATAAAGGAAT+AGG | - | chr2_1:53474212-53474231 | None:intergenic | 30.0% | |
| AAGATAACAGAAAAGACAAC+TGG | - | chr2_1:53474404-53474423 | None:intergenic | 30.0% | |
| ATACTGTAAGTGAAAATTGC+AGG | + | chr2_1:53474467-53474486 | Msa0211840:intron | 30.0% | |
| AATGGGTACTTCATATTGAT+TGG | - | chr2_1:53474815-53474834 | None:intergenic | 30.0% | |
| ! | TTGATGCTTTTCAAAGTTGA+TGG | + | chr2_1:53474835-53474854 | Msa0211840:intron | 30.0% |
| TCTGAAAGAATGTGTATTTG+GGG | + | chr2_1:53474987-53475006 | Msa0211840:intron | 30.0% | |
| GTTCATTATGGAATTCCAAT+AGG | - | chr2_1:53475085-53475104 | None:intergenic | 30.0% | |
| TAAAATGCAACGAACTTAGT+TGG | + | chr2_1:53475114-53475133 | Msa0211840:intron | 30.0% | |
| ATGATAATAAAGGGGAGAAA+TGG | - | chr2_1:53475182-53475201 | None:intergenic | 30.0% | |
| !! | TACTTTTAAGGGAAAGAGAA+GGG | + | chr2_1:53475399-53475418 | Msa0211840:intron | 30.0% |
| CAAGAAAAATATGAACCTGA+TGG | - | chr2_1:53475457-53475476 | None:intergenic | 30.0% | |
| ! | CATCAGGTTCATATTTTTCT+TGG | + | chr2_1:53475455-53475474 | Msa0211840:CDS | 30.0% |
| GTATGCTTTCACATTAATGA+TGG | + | chr2_1:53475534-53475553 | Msa0211840:intron | 30.0% | |
| !! | CAATGTTTTAGGCAAATATG+CGG | + | chr2_1:53475557-53475576 | Msa0211840:intron | 30.0% |
| TATCTACAATTGGACAATCA+AGG | - | chr2_1:53475714-53475733 | None:intergenic | 30.0% | |
| ATCATCAGTGTATCTACAAT+TGG | - | chr2_1:53475724-53475743 | None:intergenic | 30.0% | |
| TTGTAGATACACTGATGATA+TGG | + | chr2_1:53475725-53475744 | Msa0211840:intron | 30.0% | |
| AATGAAAATGCACCTAAGAT+TGG | + | chr2_1:53475979-53475998 | Msa0211840:intron | 30.0% | |
| GGTTCAACTGAAAAATATTG+AGG | + | chr2_1:53476008-53476027 | Msa0211840:intron | 30.0% | |
| ! | TTGAAACTAATCCCTTTTGT+TGG | + | chr2_1:53476293-53476312 | Msa0211840:intron | 30.0% |
| ! | GTCAGCCAAAGTATATTTTA+GGG | - | chr2_1:53476410-53476429 | None:intergenic | 30.0% |
| ! | AGTCAGCCAAAGTATATTTT+AGG | - | chr2_1:53476411-53476430 | None:intergenic | 30.0% |
| ! | AGGTATAAATTTGAGGCATA+TGG | + | chr2_1:53476554-53476573 | Msa0211840:intron | 30.0% |
| ! | GGTATAAATTTGAGGCATAT+GGG | + | chr2_1:53476555-53476574 | Msa0211840:intron | 30.0% |
| ! | TTTGTTATACATTTGCACCA+TGG | + | chr2_1:53476627-53476646 | Msa0211840:intron | 30.0% |
| GAAAGTGAAAACCACAAAAT+TGG | - | chr2_1:53476738-53476757 | None:intergenic | 30.0% | |
| GCTGTGAAGTTATAAATTCT+TGG | + | chr2_1:53476765-53476784 | Msa0211840:intron | 30.0% | |
| ACATGGTTACAAACTTAAAG+TGG | - | chr2_1:53476857-53476876 | None:intergenic | 30.0% | |
| AATGGAGGCTAATTAAAATC+AGG | + | chr2_1:53477017-53477036 | Msa0211840:intron | 30.0% | |
| ATTTACATTGTTCGACAAAC+TGG | + | chr2_1:53477054-53477073 | Msa0211840:intron | 30.0% | |
| !!! | TTTCTTATTTTTTGCTGGTG+GGG | + | chr2_1:53477169-53477188 | Msa0211840:intron | 30.0% |
| AAACAAAAACTTGAGCTTAC+TGG | - | chr2_1:53477216-53477235 | None:intergenic | 30.0% | |
| ATGAAATAAACACCAACTTC+GGG | - | chr2_1:53477363-53477382 | None:intergenic | 30.0% | |
| TATTGTGTTGTGTTGTGTTG+TGG | - | chr2_1:53470933-53470952 | None:intergenic | 35.0% | |
| AGAAAGAGAAAGAGGAAGAA+TGG | - | chr2_1:53470960-53470979 | None:intergenic | 35.0% | |
| TGAATGTAGGGTTGTTTGTA+AGG | + | chr2_1:53471092-53471111 | Msa0211840:intron | 35.0% | |
| ! | CTAACAACTTTTAGTCCTTC+TGG | + | chr2_1:53471178-53471197 | Msa0211840:CDS | 35.0% |
| CAGTAGAAAAGCAACAATAC+AGG | - | chr2_1:53471368-53471387 | None:intergenic | 35.0% | |
| CTGATACATTACTAGGGTTT+AGG | + | chr2_1:53471385-53471404 | Msa0211840:intron | 35.0% | |
| TCGGTAATTGATACACTACT+AGG | + | chr2_1:53471425-53471444 | Msa0211840:intron | 35.0% | |
| CGGTAATTGATACACTACTA+GGG | + | chr2_1:53471426-53471445 | Msa0211840:intron | 35.0% | |
| ! | GCTGTGTTTGAGATTTGAAA+CGG | + | chr2_1:53471464-53471483 | Msa0211840:intron | 35.0% |
| ! | CTGTGTTTGAGATTTGAAAC+GGG | + | chr2_1:53471465-53471484 | Msa0211840:intron | 35.0% |
| ! | GATGATGATGAAACTTGAAC+TGG | + | chr2_1:53471870-53471889 | Msa0211840:intron | 35.0% |
| TGATGTAAATATCTTGGCTG+TGG | + | chr2_1:53471919-53471938 | Msa0211840:intron | 35.0% | |
| !! | AAGTCCACTGATTTGATTTG+TGG | - | chr2_1:53472257-53472276 | None:intergenic | 35.0% |
| ! | CAAATCAGTGGACTTGATTT+CGG | + | chr2_1:53472262-53472281 | Msa0211840:intron | 35.0% |
| TTTCCGAGTTCACTTTATCT+CGG | + | chr2_1:53472307-53472326 | Msa0211840:intron | 35.0% | |
| TACAAGTTCAATCTACCACT+GGG | - | chr2_1:53472385-53472404 | None:intergenic | 35.0% | |
| ATACAAGTTCAATCTACCAC+TGG | - | chr2_1:53472386-53472405 | None:intergenic | 35.0% | |
| ! | TGAAGCCTTGTGAGTTTATT+TGG | + | chr2_1:53472471-53472490 | Msa0211840:intron | 35.0% |
| ! | GAAGCCTTGTGAGTTTATTT+GGG | + | chr2_1:53472472-53472491 | Msa0211840:intron | 35.0% |
| TGTGCAGGATAAGTTATGTT+GGG | + | chr2_1:53472500-53472519 | Msa0211840:intron | 35.0% | |
| TTGTTCATATTGCACATAGG+AGG | + | chr2_1:53472596-53472615 | Msa0211840:intron | 35.0% | |
| GAAGAAACTGCCATCTATAT+TGG | + | chr2_1:53472818-53472837 | Msa0211840:CDS | 35.0% | |
| GCTTCATCAACCAATATAGA+TGG | - | chr2_1:53472831-53472850 | None:intergenic | 35.0% | |
| GGATGCTGAGTAATTTAAAG+GGG | - | chr2_1:53472972-53472991 | None:intergenic | 35.0% | |
| GTTGAGGATACTTGAAAGTA+TGG | + | chr2_1:53473090-53473109 | Msa0211840:intron | 35.0% | |
| ! | TACTTGAAAGTATGGCCAAT+TGG | + | chr2_1:53473098-53473117 | Msa0211840:intron | 35.0% |
| TTGTTCTATCAATGGCCAAT+TGG | - | chr2_1:53473116-53473135 | None:intergenic | 35.0% | |
| TAGTTTCTGCAAGTTGTTTG+TGG | + | chr2_1:53473145-53473164 | Msa0211840:intron | 35.0% | |
| CTTCATATTATGGCAGTTGA+TGG | + | chr2_1:53473398-53473417 | Msa0211840:intron | 35.0% | |
| ! | TGAATATGGTCTTAAACACG+AGG | + | chr2_1:53473429-53473448 | Msa0211840:intron | 35.0% |
| ! | GTGCTATTGAAGTTTCTGTT+AGG | + | chr2_1:53473451-53473470 | Msa0211840:intron | 35.0% |
| GATTCATCAAGTACTTCTGA+GGG | - | chr2_1:53473612-53473631 | None:intergenic | 35.0% | |
| TGATTCATCAAGTACTTCTG+AGG | - | chr2_1:53473613-53473632 | None:intergenic | 35.0% | |
| ATAAATAGGGGGAATCAGTT+TGG | - | chr2_1:53473637-53473656 | None:intergenic | 35.0% | |
| CAACAGCAATGGAAAAAAGT+AGG | - | chr2_1:53473869-53473888 | None:intergenic | 35.0% | |
| !!! | TTTGTTTTTGTTCAGTGGCA+TGG | + | chr2_1:53473959-53473978 | Msa0211840:intron | 35.0% |
| !!! | TTGTTTTTGTTCAGTGGCAT+GGG | + | chr2_1:53473960-53473979 | Msa0211840:intron | 35.0% |
| !!! | TGCTTTTTCGAACCAAAACT+CGG | - | chr2_1:53473995-53474014 | None:intergenic | 35.0% |
| CAATGTTGTAACCTGTACTT+CGG | + | chr2_1:53474121-53474140 | Msa0211840:intron | 35.0% | |
| CCTAACTCATTACAAGCAAT+AGG | - | chr2_1:53474227-53474246 | None:intergenic | 35.0% | |
| CCTATTGCTTGTAATGAGTT+AGG | + | chr2_1:53474224-53474243 | Msa0211840:intron | 35.0% | |
| TTATATGCTGGGAGTAGATA+TGG | - | chr2_1:53474616-53474635 | None:intergenic | 35.0% | |
| AGAGAAATAACGTGTAATCC+AGG | + | chr2_1:53474702-53474721 | Msa0211840:intron | 35.0% | |
| GATAAAACACCAACTTTACC+TGG | - | chr2_1:53474723-53474742 | None:intergenic | 35.0% | |
| !! | CCAAAAACTCAAAGTTGATG+AGG | - | chr2_1:53474745-53474764 | None:intergenic | 35.0% |
| !! | CCTCATCAACTTTGAGTTTT+TGG | + | chr2_1:53474742-53474761 | Msa0211840:intron | 35.0% |
| TGTGTATAAAAAAGAGTCGG+AGG | - | chr2_1:53475142-53475161 | None:intergenic | 35.0% | |
| !!! | TTCTTTTTTTGCCCTGATAG+TGG | + | chr2_1:53475216-53475235 | Msa0211840:intron | 35.0% |
| ! | TAATGGACCACAACTATATC+AGG | + | chr2_1:53475284-53475303 | Msa0211840:CDS | 35.0% |
| ACTATATCAGGTATGGCATA+TGG | + | chr2_1:53475296-53475315 | Msa0211840:intron | 35.0% | |
| !! | AGTGTTTGATTAGTTTGCAC+TGG | + | chr2_1:53475336-53475355 | Msa0211840:intron | 35.0% |
| !! | GTACTTTTAAGGGAAAGAGA+AGG | + | chr2_1:53475398-53475417 | Msa0211840:intron | 35.0% |
| GAAAGAGAAGGGAAAATTGA+AGG | + | chr2_1:53475410-53475429 | Msa0211840:intron | 35.0% | |
| !!! | TTGAAGGTTGTTTTTGCTGT+AGG | + | chr2_1:53475426-53475445 | Msa0211840:intron | 35.0% |
| CTAAGACATTTCTTGAGAAG+AGG | + | chr2_1:53475512-53475531 | Msa0211840:CDS | 35.0% | |
| ATGAATTGATAGAGATGTCG+AGG | - | chr2_1:53475684-53475703 | None:intergenic | 35.0% | |
| ! | CATGATGATTTTACAGGGAT+GGG | - | chr2_1:53476094-53476113 | None:intergenic | 35.0% |
| ! | TCATGATGATTTTACAGGGA+TGG | - | chr2_1:53476095-53476114 | None:intergenic | 35.0% |
| ! | CAGCTCATGATGATTTTACA+GGG | - | chr2_1:53476099-53476118 | None:intergenic | 35.0% |
| TTTCAAAGACTAACAAAGGC+CGG | - | chr2_1:53476279-53476298 | None:intergenic | 35.0% | |
| AACATTGAAATCGGCATCAT+TGG | + | chr2_1:53476351-53476370 | Msa0211840:CDS | 35.0% | |
| ! | AAATTTGAGGCATATGGGTT+AGG | + | chr2_1:53476560-53476579 | Msa0211840:intron | 35.0% |
| ! | TGATCTAAGCTTTTTGACCA+TGG | - | chr2_1:53476647-53476666 | None:intergenic | 35.0% |
| AAAGCTTAGATCAAGTCCTT+TGG | + | chr2_1:53476654-53476673 | Msa0211840:intron | 35.0% | |
| AAGCTTAGATCAAGTCCTTT+GGG | + | chr2_1:53476655-53476674 | Msa0211840:intron | 35.0% | |
| GAAAACCACAAAATTGGACA+TGG | - | chr2_1:53476732-53476751 | None:intergenic | 35.0% | |
| ACAACATAATAGAGACTGTC+GGG | - | chr2_1:53476800-53476819 | None:intergenic | 35.0% | |
| GACAACATAATAGAGACTGT+CGG | - | chr2_1:53476801-53476820 | None:intergenic | 35.0% | |
| GGTTACAAACTTAAAGTGGA+GGG | - | chr2_1:53476853-53476872 | None:intergenic | 35.0% | |
| TGGTTACAAACTTAAAGTGG+AGG | - | chr2_1:53476854-53476873 | None:intergenic | 35.0% | |
| ATGACAAGATACAAGATGGA+GGG | - | chr2_1:53476931-53476950 | None:intergenic | 35.0% | |
| CATGATGACAAGATACAAGA+TGG | - | chr2_1:53476935-53476954 | None:intergenic | 35.0% | |
| TGCTACTCACAAAATGCATT+GGG | - | chr2_1:53477142-53477161 | None:intergenic | 35.0% | |
| TTGCTACTCACAAAATGCAT+TGG | - | chr2_1:53477143-53477162 | None:intergenic | 35.0% | |
| TGATGAATGAAGACTTGTGA+TGG | + | chr2_1:53477413-53477432 | Msa0211840:three_prime_UTR | 35.0% | |
| AAATTTGTGAGCTACTCTTG+TGG | + | chr2_1:53477443-53477462 | Msa0211840:intron | 35.0% | |
| TAAGTCAGGGAAGAATGAGT+AGG | - | chr2_1:53470893-53470912 | None:intergenic | 40.0% | |
| ATCTGAACAAGCTTACCAGA+AGG | - | chr2_1:53471196-53471215 | None:intergenic | 40.0% | |
| GAACATGCTTTAACTGCTGT+TGG | + | chr2_1:53471217-53471236 | Msa0211840:CDS | 40.0% | |
| CAAACTTCTCTCGGTATCAA+AGG | + | chr2_1:53471247-53471266 | Msa0211840:CDS | 40.0% | |
| GTACCGAGATAAAGTGAACT+CGG | - | chr2_1:53472313-53472332 | None:intergenic | 40.0% | |
| CTTGTATGATTGTCGTCTGA+TGG | + | chr2_1:53472399-53472418 | Msa0211840:intron | 40.0% | |
| ! | ATGATTGTCGTCTGATGGAT+AGG | + | chr2_1:53472404-53472423 | Msa0211840:intron | 40.0% |
| CATGCCCAAATAAACTCACA+AGG | - | chr2_1:53472479-53472498 | None:intergenic | 40.0% | |
| CTTGTGAGTTTATTTGGGCA+TGG | + | chr2_1:53472477-53472496 | Msa0211840:intron | 40.0% | |
| GTGTGCAGGATAAGTTATGT+TGG | + | chr2_1:53472499-53472518 | Msa0211840:intron | 40.0% | |
| AAACGATAGCACAGCCAAAT+TGG | - | chr2_1:53472942-53472961 | None:intergenic | 40.0% | |
| TCTCAAATACTAAGCCGAGA+AGG | - | chr2_1:53473032-53473051 | None:intergenic | 40.0% | |
| CTCTTTGTTCATATGACTGC+AGG | + | chr2_1:53473245-53473264 | Msa0211840:intron | 40.0% | |
| ! | TTTTGTGAAGGGAAAACCCT+TGG | - | chr2_1:53473567-53473586 | None:intergenic | 40.0% |
| ! | AAGGGTTTTCCCTTCACAAA+AGG | + | chr2_1:53473566-53473585 | Msa0211840:intron | 40.0% |
| AGGGTTTGTAAACGAAAGGA+GGG | - | chr2_1:53473593-53473612 | None:intergenic | 40.0% | |
| TCTGAGGGTTTGTAAACGAA+AGG | - | chr2_1:53473597-53473616 | None:intergenic | 40.0% | |
| CTGTTTCAAGGAGTTACTCA+GGG | - | chr2_1:53473697-53473716 | None:intergenic | 40.0% | |
| ACTGTTTCAAGGAGTTACTC+AGG | - | chr2_1:53473698-53473717 | None:intergenic | 40.0% | |
| !! | TTCCATTGCTGTTGAGCTTT+TGG | + | chr2_1:53473875-53473894 | Msa0211840:intron | 40.0% |
| TACCAAAAGCTCAACAGCAA+TGG | - | chr2_1:53473880-53473899 | None:intergenic | 40.0% | |
| ! | GAGCTTTTGGTATATGACAG+TGG | + | chr2_1:53473888-53473907 | Msa0211840:intron | 40.0% |
| !!! | GAGTTTTGGTTCGAAAAAGC+AGG | + | chr2_1:53473994-53474013 | Msa0211840:CDS | 40.0% |
| ! | GCAGTATCACCGATTGTATA+AGG | + | chr2_1:53474028-53474047 | Msa0211840:CDS | 40.0% |
| CTTCCTGTTCTGCCTATATT+TGG | + | chr2_1:53474081-53474100 | Msa0211840:intron | 40.0% | |
| AGACCAAATATAGGCAGAAC+AGG | - | chr2_1:53474087-53474106 | None:intergenic | 40.0% | |
| TAAACGGCACTATCCAGAAA+AGG | - | chr2_1:53474302-53474321 | None:intergenic | 40.0% | |
| ATGCAGGAATTTACTCAGTC+TGG | + | chr2_1:53474534-53474553 | Msa0211840:CDS | 40.0% | |
| TGCAGGAATTTACTCAGTCT+GGG | + | chr2_1:53474535-53474554 | Msa0211840:CDS | 40.0% | |
| ACGTGTAATCCAGGTAAAGT+TGG | + | chr2_1:53474711-53474730 | Msa0211840:intron | 40.0% | |
| ! | GTTGCTGGGTTTGATGATAA+TGG | + | chr2_1:53475267-53475286 | Msa0211840:CDS | 40.0% |
| GACCACAACTATATCAGGTA+TGG | + | chr2_1:53475289-53475308 | Msa0211840:intron | 40.0% | |
| TGCCATACCTGATATAGTTG+TGG | - | chr2_1:53475294-53475313 | None:intergenic | 40.0% | |
| !!! | AAGGTTGTTTTTGCTGTAGG+TGG | + | chr2_1:53475429-53475448 | Msa0211840:intron | 40.0% |
| TTCTTGGAAAGCTTCTGCTA+TGG | + | chr2_1:53475471-53475490 | Msa0211840:CDS | 40.0% | |
| TCTTGGAAAGCTTCTGCTAT+GGG | + | chr2_1:53475472-53475491 | Msa0211840:CDS | 40.0% | |
| CCATATTGACACTGAAGGAA+GGG | + | chr2_1:53475772-53475791 | Msa0211840:CDS | 40.0% | |
| TGAACCAAGAAGCCAATCTT+AGG | - | chr2_1:53475994-53476013 | None:intergenic | 40.0% | |
| GTGATCTTGGCATATACCAA+AGG | + | chr2_1:53476068-53476087 | Msa0211840:intron | 40.0% | |
| ! | GCAGCTCATGATGATTTTAC+AGG | - | chr2_1:53476100-53476119 | None:intergenic | 40.0% |
| TTGGAGCCTTGCTAACATAA+AGG | - | chr2_1:53476122-53476141 | None:intergenic | 40.0% | |
| AGTTCCTAATCCAACAAGCT+TGG | - | chr2_1:53476141-53476160 | None:intergenic | 40.0% | |
| TTGGTGCAGACAAAAAGTTC+AGG | + | chr2_1:53476370-53476389 | Msa0211840:CDS | 40.0% | |
| CAAAACCAAACAACACCCAA+AGG | - | chr2_1:53476673-53476692 | None:intergenic | 40.0% | |
| CACAAAATTGGACATGGTGT+TGG | - | chr2_1:53476726-53476745 | None:intergenic | 40.0% | |
| ! | CAACACCATGTCCAATTTTG+TGG | + | chr2_1:53476724-53476743 | Msa0211840:intron | 40.0% |
| TGACAAGATACAAGATGGAG+GGG | - | chr2_1:53476930-53476949 | None:intergenic | 40.0% | |
| GATGACAAGATACAAGATGG+AGG | - | chr2_1:53476932-53476951 | None:intergenic | 40.0% | |
| GGGAAGTTATCCATTTGCAT+TGG | - | chr2_1:53477122-53477141 | None:intergenic | 40.0% | |
| !! | AAGTTTTTCAGAAGGCTTGC+TGG | - | chr2_1:53477472-53477491 | None:intergenic | 40.0% |
| CTGAGCGTAGATGTAAGTCA+GGG | - | chr2_1:53470906-53470925 | None:intergenic | 45.0% | |
| ACTGAGCGTAGATGTAAGTC+AGG | - | chr2_1:53470907-53470926 | None:intergenic | 45.0% | |
| !! | GCTTTAACTGCTGTTGGTTC+TGG | + | chr2_1:53471223-53471242 | Msa0211840:CDS | 45.0% |
| !! | GGTTCTGGACAAACTTCTCT+CGG | + | chr2_1:53471238-53471257 | Msa0211840:CDS | 45.0% |
| ! | GATTTGAAACGGGTCTCTTG+AGG | + | chr2_1:53471475-53471494 | Msa0211840:intron | 45.0% |
| GCATATAGCTACCAGAAACG+TGG | - | chr2_1:53471554-53471573 | None:intergenic | 45.0% | |
| TGGTCTAATCCTCGCATTTC+TGG | - | chr2_1:53471582-53471601 | None:intergenic | 45.0% | |
| ATATCTTGGCTGTGGTACTG+AGG | + | chr2_1:53471927-53471946 | Msa0211840:intron | 45.0% | |
| TTCATCGGGTCGTAAATGAC+GGG | - | chr2_1:53472064-53472083 | None:intergenic | 45.0% | |
| GTTCATCGGGTCGTAAATGA+CGG | - | chr2_1:53472065-53472084 | None:intergenic | 45.0% | |
| TCATTTACGACCCGATGAAC+AGG | + | chr2_1:53472065-53472084 | Msa0211840:intron | 45.0% | |
| ! | TCCTTATTAGAAGCATGGGC+AGG | + | chr2_1:53472341-53472360 | Msa0211840:intron | 45.0% |
| ! | CCTTATTAGAAGCATGGGCA+GGG | + | chr2_1:53472342-53472361 | Msa0211840:intron | 45.0% |
| AGTTCAATCTACCACTGGGA+GGG | - | chr2_1:53472381-53472400 | None:intergenic | 45.0% | |
| AAGTTCAATCTACCACTGGG+AGG | - | chr2_1:53472382-53472401 | None:intergenic | 45.0% | |
| TTTATTTGGGCATGGTGTGC+AGG | + | chr2_1:53472485-53472504 | Msa0211840:intron | 45.0% | |
| GCAGGATAAGTTATGTTGGG+AGG | + | chr2_1:53472503-53472522 | Msa0211840:intron | 45.0% | |
| ! | TTGGTTCTTGCAGCTGCAAA+TGG | + | chr2_1:53472777-53472796 | Msa0211840:intron | 45.0% |
| AGATGGCAGTTTCTTCTCTG+TGG | - | chr2_1:53472814-53472833 | None:intergenic | 45.0% | |
| ! | AAGGAGGGACCTTTTGTGAA+GGG | - | chr2_1:53473578-53473597 | None:intergenic | 45.0% |
| ! | AAAGGAGGGACCTTTTGTGA+AGG | - | chr2_1:53473579-53473598 | None:intergenic | 45.0% |
| GAGGGTTTGTAAACGAAAGG+AGG | - | chr2_1:53473594-53473613 | None:intergenic | 45.0% | |
| TCAAGGAGTTACTCAGGGAT+AGG | - | chr2_1:53473692-53473711 | None:intergenic | 45.0% | |
| CGAACCAAAACTCGGAAATC+AGG | - | chr2_1:53473987-53474006 | None:intergenic | 45.0% | |
| GGTTCGAAAAAGCAGGAAAC+AGG | + | chr2_1:53474001-53474020 | Msa0211840:CDS | 45.0% | |
| ! | ACAAGTTGAGTGACAGGGAT+TGG | - | chr2_1:53474495-53474514 | None:intergenic | 45.0% |
| !! | TTTGCCCTGATAGTGGTGTT+AGG | + | chr2_1:53475223-53475242 | Msa0211840:intron | 45.0% |
| ATGGCCTAACACCACTATCA+GGG | - | chr2_1:53475230-53475249 | None:intergenic | 45.0% | |
| AATGGCCTAACACCACTATC+AGG | - | chr2_1:53475231-53475250 | None:intergenic | 45.0% | |
| ! | GATAGTGGTGTTAGGCCATT+TGG | + | chr2_1:53475231-53475250 | Msa0211840:intron | 45.0% |
| ATCAAACCCAGCAACAAGCA+GGG | - | chr2_1:53475262-53475281 | None:intergenic | 45.0% | |
| CTTGGAAAGCTTCTGCTATG+GGG | + | chr2_1:53475473-53475492 | Msa0211840:CDS | 45.0% | |
| TCAGTGTCAATATGGCTGTG+TGG | - | chr2_1:53475767-53475786 | None:intergenic | 45.0% | |
| CACAGCCATATTGACACTGA+AGG | + | chr2_1:53475767-53475786 | Msa0211840:CDS | 45.0% | |
| GCCATATTGACACTGAAGGA+AGG | + | chr2_1:53475771-53475790 | Msa0211840:CDS | 45.0% | |
| CCCTTCCTTCAGTGTCAATA+TGG | - | chr2_1:53475775-53475794 | None:intergenic | 45.0% | |
| ATTGACACTGAAGGAAGGGT+AGG | + | chr2_1:53475776-53475795 | Msa0211840:intron | 45.0% | |
| !! | TGCACCTAAGATTGGCTTCT+TGG | + | chr2_1:53475987-53476006 | Msa0211840:intron | 45.0% |
| ! | ATTTTACAGGGATGGGCCTT+TGG | - | chr2_1:53476087-53476106 | None:intergenic | 45.0% |
| GAGCTGCCTTTATGTTAGCA+AGG | + | chr2_1:53476113-53476132 | Msa0211840:intron | 45.0% | |
| CCTGGGAAATGCCAACAAAA+GGG | - | chr2_1:53476307-53476326 | None:intergenic | 45.0% | |
| ACCTGGGAAATGCCAACAAA+AGG | - | chr2_1:53476308-53476327 | None:intergenic | 45.0% | |
| TTGGCATTTCCCAGGTTTGA+GGG | + | chr2_1:53476312-53476331 | Msa0211840:intron | 45.0% | |
| !! | TATGGGTTAGGACTGCGAAA+TGG | + | chr2_1:53476572-53476591 | Msa0211840:intron | 45.0% |
| !! | CAAGTCCTTTGGGTGTTGTT+TGG | + | chr2_1:53476665-53476684 | Msa0211840:intron | 45.0% |
| TAATAGAGACTGTCGGGCAA+CGG | - | chr2_1:53476794-53476813 | None:intergenic | 45.0% | |
| !! | GGAGGGGTATTTGACAACAA+CGG | - | chr2_1:53476914-53476933 | None:intergenic | 45.0% |
| !!! | CTTATTTTTTGCTGGTGGGG+TGG | + | chr2_1:53477172-53477191 | Msa0211840:intron | 45.0% |
| ATGAAGACTTGTGATGGCAC+TGG | + | chr2_1:53477419-53477438 | Msa0211840:three_prime_UTR | 45.0% | |
| TTTGTGAGCTACTCTTGTGG+TGG | + | chr2_1:53477446-53477465 | Msa0211840:intron | 45.0% | |
| !! | TAACTATATATATATATATT+CGG | + | chr2_1:53472735-53472754 | Msa0211840:intron | 5.0% |
| AGCTACCAGAAACGTGGCAT+CGG | - | chr2_1:53471548-53471567 | None:intergenic | 50.0% | |
| ATGCTCTGACCAGAAATGCG+AGG | + | chr2_1:53471570-53471589 | Msa0211840:intron | 50.0% | |
| GACGGGTCGCAAATTTGAAC+AGG | - | chr2_1:53472047-53472066 | None:intergenic | 50.0% | |
| CCCTGCCCATGCTTCTAATA+AGG | - | chr2_1:53472345-53472364 | None:intergenic | 50.0% | |
| TTAACTTCTGTCCCTCCCAG+TGG | + | chr2_1:53472367-53472386 | Msa0211840:intron | 50.0% | |
| GGCAGTTGGAAGGGATTAGA+AGG | - | chr2_1:53473671-53473690 | None:intergenic | 50.0% | |
| TCAGGGATAGGCAGTTGGAA+GGG | - | chr2_1:53473680-53473699 | None:intergenic | 50.0% | |
| GTTACTCAGGGATAGGCAGT+TGG | - | chr2_1:53473685-53473704 | None:intergenic | 50.0% | |
| ! | GGGTCCTGATTTCCGAGTTT+TGG | + | chr2_1:53473980-53473999 | Msa0211840:CDS | 50.0% |
| TCCCTGTCACTCAACTTGTG+AGG | + | chr2_1:53474496-53474515 | Msa0211840:CDS | 50.0% | |
| ! | CCCTCACAAGTTGAGTGACA+GGG | - | chr2_1:53474500-53474519 | None:intergenic | 50.0% |
| CCCTGTCACTCAACTTGTGA+GGG | + | chr2_1:53474497-53474516 | Msa0211840:CDS | 50.0% | |
| ! | TCCCTCACAAGTTGAGTGAC+AGG | - | chr2_1:53474501-53474520 | None:intergenic | 50.0% |
| ACAAGCAGGGACACTCCAAA+TGG | - | chr2_1:53475249-53475268 | None:intergenic | 50.0% | |
| CATCAAACCCAGCAACAAGC+AGG | - | chr2_1:53475263-53475282 | None:intergenic | 50.0% | |
| TTGCTGTAGGTGGATCCATC+AGG | + | chr2_1:53475439-53475458 | Msa0211840:intron | 50.0% | |
| TAGCAAGGCTCCAAGCTTGT+TGG | + | chr2_1:53476128-53476147 | Msa0211840:intron | 50.0% | |
| !! | GGCTCCAAGCTTGTTGGATT+AGG | + | chr2_1:53476134-53476153 | Msa0211840:intron | 50.0% |
| ! | CCCTTTTGTTGGCATTTCCC+AGG | + | chr2_1:53476304-53476323 | Msa0211840:intron | 50.0% |
| GTTGGCATTTCCCAGGTTTG+AGG | + | chr2_1:53476311-53476330 | Msa0211840:intron | 50.0% | |
| GAGATCTGTCCCTCAAACCT+GGG | - | chr2_1:53476324-53476343 | None:intergenic | 50.0% | |
| TGAGATCTGTCCCTCAAACC+TGG | - | chr2_1:53476325-53476344 | None:intergenic | 50.0% | |
| AATAGAGACTGTCGGGCAAC+GGG | - | chr2_1:53476793-53476812 | None:intergenic | 50.0% | |
| ATACCACACGTAGACGGGAA+TGG | - | chr2_1:53476888-53476907 | None:intergenic | 50.0% | |
| ! | GGGGTATTTGACAACAACGG+AGG | - | chr2_1:53476911-53476930 | None:intergenic | 50.0% |
| CTCAGGGATAGGCAGTTGGA+AGG | - | chr2_1:53473681-53473700 | None:intergenic | 55.0% | |
| GGAAGTTGCTGCTGTCATGC+AGG | + | chr2_1:53474518-53474537 | Msa0211840:CDS | 55.0% | |
| ! | GAGTGTCCCTGCTTGTTGCT+GGG | + | chr2_1:53475253-53475272 | Msa0211840:CDS | 55.0% |
| ATAGAGACTGTCGGGCAACG+GGG | - | chr2_1:53476792-53476811 | None:intergenic | 55.0% | |
| !! | AGTGCGAGTGGAGGAGTACT+AGG | - | chr2_1:53476825-53476844 | None:intergenic | 55.0% |
| ! | AGGGTGTTTAGTGCGAGTGG+AGG | - | chr2_1:53476834-53476853 | None:intergenic | 55.0% |
| !! | TGGAGGGTGTTTAGTGCGAG+TGG | - | chr2_1:53476837-53476856 | None:intergenic | 55.0% |
| CGGGAATGGAGCATGCAACA+TGG | - | chr2_1:53476874-53476893 | None:intergenic | 55.0% | |
| GGAGGATACCACACGTAGAC+GGG | - | chr2_1:53476893-53476912 | None:intergenic | 55.0% | |
| CGGAGGATACCACACGTAGA+CGG | - | chr2_1:53476894-53476913 | None:intergenic | 55.0% | |
| ! | TTTTGCTGGTGGGGTGGCAT+TGG | + | chr2_1:53477178-53477197 | Msa0211840:intron | 55.0% |
| TTTGCTGGTGGGGTGGCATT+GGG | + | chr2_1:53477179-53477198 | Msa0211840:intron | 55.0% | |
| ! | CAACTTCGGGAGCACAAGGA+TGG | - | chr2_1:53477350-53477369 | None:intergenic | 55.0% |
| CATCCTTGTGCTCCCGAAGT+TGG | + | chr2_1:53477348-53477367 | Msa0211840:three_prime_UTR | 55.0% | |
| ! | ACACCAACTTCGGGAGCACA+AGG | - | chr2_1:53477354-53477373 | None:intergenic | 55.0% |
| CGGTTCCGATGCCACGTTTC+TGG | + | chr2_1:53471540-53471559 | Msa0211840:intron | 60.0% | |
| ! | GGAGTGTCCCTGCTTGTTGC+TGG | + | chr2_1:53475252-53475271 | Msa0211840:CDS | 60.0% |
| GCTCCATTCCCGTCTACGTG+TGG | + | chr2_1:53476882-53476901 | Msa0211840:intron | 60.0% | |
| TTGCTGGTGGGGTGGCATTG+GGG | + | chr2_1:53477180-53477199 | Msa0211840:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 53470884 | 53477534 | 53470884 | ID=Msa0211840;Name=Msa0211840 |
| chr2_1 | mRNA | 53470884 | 53477534 | 53470884 | ID=Msa0211840-mRNA-1;Parent=Msa0211840;Name=Msa0211840-mRNA-1;_AED=0.10;_eAED=0.10;_QI=155|1|1|1|0.81|0.66|12|181|235 |
| chr2_1 | exon | 53470884 | 53470988 | 53470884 | ID=Msa0211840-mRNA-1:exon:14870;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53471101 | 53471268 | 53471101 | ID=Msa0211840-mRNA-1:exon:14871;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53472790 | 53472854 | 53472790 | ID=Msa0211840-mRNA-1:exon:14872;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53473267 | 53473313 | 53473267 | ID=Msa0211840-mRNA-1:exon:14873;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53473974 | 53474049 | 53473974 | ID=Msa0211840-mRNA-1:exon:14874;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53474489 | 53474556 | 53474489 | ID=Msa0211840-mRNA-1:exon:14875;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53475236 | 53475305 | 53475236 | ID=Msa0211840-mRNA-1:exon:14876;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53475448 | 53475533 | 53475448 | ID=Msa0211840-mRNA-1:exon:14877;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53475731 | 53475793 | 53475731 | ID=Msa0211840-mRNA-1:exon:14878;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53476326 | 53476391 | 53476326 | ID=Msa0211840-mRNA-1:exon:14879;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53477282 | 53477453 | 53477282 | ID=Msa0211840-mRNA-1:exon:14880;Parent=Msa0211840-mRNA-1 |
| chr2_1 | exon | 53477477 | 53477534 | 53477477 | ID=Msa0211840-mRNA-1:exon:14881;Parent=Msa0211840-mRNA-1 |
| chr2_1 | five_prime_UTR | 53470884 | 53470988 | 53470884 | ID=Msa0211840-mRNA-1:five_prime_utr;Parent=Msa0211840-mRNA-1 |
| chr2_1 | five_prime_UTR | 53471101 | 53471150 | 53471101 | ID=Msa0211840-mRNA-1:five_prime_utr;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53471151 | 53471268 | 53471151 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53472790 | 53472854 | 53472790 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53473267 | 53473313 | 53473267 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53473974 | 53474049 | 53473974 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53474489 | 53474556 | 53474489 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53475236 | 53475305 | 53475236 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53475448 | 53475533 | 53475448 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53475731 | 53475793 | 53475731 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53476326 | 53476391 | 53476326 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | CDS | 53477282 | 53477330 | 53477282 | ID=Msa0211840-mRNA-1:cds;Parent=Msa0211840-mRNA-1 |
| chr2_1 | three_prime_UTR | 53477331 | 53477453 | 53477331 | ID=Msa0211840-mRNA-1:three_prime_utr;Parent=Msa0211840-mRNA-1 |
| chr2_1 | three_prime_UTR | 53477477 | 53477534 | 53477477 | ID=Msa0211840-mRNA-1:three_prime_utr;Parent=Msa0211840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
