Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671600 | XP_024638218.1 | 97.595 | 582 | 13 | 1 | 1 | 582 | 1 | 581 | 0.0 | 1157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671600 | sp|Q9LQL2|PTR14_ARATH | 46.939 | 588 | 292 | 7 | 4 | 582 | 8 | 584 | 6.34e-178 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671600 | A0A396I0T1 | 97.595 | 582 | 13 | 1 | 1 | 582 | 1 | 581 | 0.0 | 1157 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0671600 | -0.837617 | 4.676115e-57 | -8.615850e-47 |
| Msa0010020 | Msa0671600 | 0.807643 | 4.573687e-50 | -8.615850e-47 |
| Msa0027580 | Msa0671600 | 0.802916 | 4.469466e-49 | -8.615850e-47 |
| Msa0049400 | Msa0671600 | -0.801191 | 1.011608e-48 | -8.615850e-47 |
| Msa0075340 | Msa0671600 | 0.802481 | 5.497716e-49 | -8.615850e-47 |
| Msa0619070 | Msa0671600 | 0.811195 | 7.903552e-51 | -8.615850e-47 |
| Msa0626680 | Msa0671600 | 0.800018 | 1.754830e-48 | -8.615850e-47 |
| Msa0643250 | Msa0671600 | 0.813604 | 2.352909e-51 | -8.615850e-47 |
| Msa0669850 | Msa0671600 | 0.801320 | 9.521403e-49 | -8.615850e-47 |
| Msa0671600 | Msa0709500 | 0.801349 | 9.389856e-49 | -8.615850e-47 |
| Msa0671600 | Msa0735620 | -0.803505 | 3.376936e-49 | -8.615850e-47 |
| Msa0671600 | Msa0743680 | 0.802443 | 5.597835e-49 | -8.615850e-47 |
| Msa0671600 | Msa0754720 | -0.824011 | 1.016797e-53 | -8.615850e-47 |
| Msa0671600 | Msa0790850 | 0.804542 | 2.055181e-49 | -8.615850e-47 |
| Msa0671600 | Msa0814630 | -0.802730 | 4.883699e-49 | -8.615850e-47 |
| Msa0671600 | Msa0855160 | -0.803012 | 4.270441e-49 | -8.615850e-47 |
| Msa0671600 | Msa0863800 | 0.800445 | 1.436247e-48 | -8.615850e-47 |
| Msa0671600 | Msa0947530 | -0.812161 | 4.873175e-51 | -8.615850e-47 |
| Msa0671600 | Msa1081560 | 0.800877 | 1.172502e-48 | -8.615850e-47 |
| Msa0671600 | Msa1093330 | 0.804648 | 1.952926e-49 | -8.615850e-47 |
| Msa0671600 | Msa1130210 | -0.825448 | 4.661377e-54 | -8.615850e-47 |
| Msa0671600 | Msa1171360 | 0.801054 | 1.078842e-48 | -8.615850e-47 |
| Msa0671600 | Msa1362510 | 0.804824 | 1.794912e-49 | -8.615850e-47 |
| Msa0671600 | Msa1386230 | 0.802356 | 5.831333e-49 | -8.615850e-47 |
| Msa0671600 | Msa1390310 | 0.812966 | 3.249661e-51 | -8.615850e-47 |
| Msa0671600 | Msa1428370 | 0.966032 | 2.210599e-125 | -8.615850e-47 |
| Msa0671600 | Msa1439960 | 0.818398 | 2.001724e-52 | -8.615850e-47 |
| Msa0671600 | Msa1442220 | -0.817956 | 2.520107e-52 | -8.615850e-47 |
| Msa0172350 | Msa0671600 | 0.818598 | 1.803054e-52 | -8.615850e-47 |
| Msa0227400 | Msa0671600 | 0.814467 | 1.518364e-51 | -8.615850e-47 |
| Msa0377530 | Msa0671600 | 0.803347 | 3.640382e-49 | -8.615850e-47 |
| Msa0426810 | Msa0671600 | 0.804047 | 2.604999e-49 | -8.615850e-47 |
| Msa0469910 | Msa0671600 | -0.809746 | 1.624382e-50 | -8.615850e-47 |
| Msa0239940 | Msa0671600 | 0.809218 | 2.109836e-50 | -8.615850e-47 |
| Msa0267760 | Msa0671600 | 0.810157 | 1.325251e-50 | -8.615850e-47 |
| Msa0275400 | Msa0671600 | -0.813954 | 1.970103e-51 | -8.615850e-47 |
| Msa0308220 | Msa0671600 | 0.800450 | 1.432858e-48 | -8.615850e-47 |
| Msa0526710 | Msa0671600 | 0.806377 | 8.471318e-50 | -8.615850e-47 |
| Msa0536790 | Msa0671600 | 0.900072 | 1.055262e-77 | -8.615850e-47 |
| Msa0542160 | Msa0671600 | 0.832216 | 1.073103e-55 | -8.615850e-47 |
| Msa0576100 | Msa0671600 | -0.810357 | 1.199802e-50 | -8.615850e-47 |
| Msa0586540 | Msa0671600 | 0.880797 | 4.083347e-70 | -8.615850e-47 |
| Msa0586850 | Msa0671600 | 0.801545 | 8.561286e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671600 | MtrunA17_Chr4g0011041 | 97.595 | 582 | 13 | 1 | 1 | 582 | 1 | 581 | 0.0 | 1157 |
| Msa0671600 | MtrunA17_Chr4g0011471 | 68.421 | 532 | 166 | 2 | 51 | 582 | 30 | 559 | 0.0 | 723 |
| Msa0671600 | MtrunA17_Chr5g0400371 | 47.270 | 586 | 302 | 4 | 1 | 582 | 76 | 658 | 0.0 | 530 |
| Msa0671600 | MtrunA17_Chr4g0054891 | 48.663 | 561 | 282 | 4 | 23 | 582 | 96 | 651 | 0.0 | 528 |
| Msa0671600 | MtrunA17_Chr7g0217461 | 46.903 | 565 | 290 | 4 | 22 | 580 | 9 | 569 | 2.72e-175 | 509 |
| Msa0671600 | MtrunA17_Chr7g0214461 | 43.038 | 553 | 302 | 7 | 32 | 582 | 73 | 614 | 2.36e-150 | 446 |
| Msa0671600 | MtrunA17_Chr1g0213711 | 41.065 | 582 | 318 | 6 | 1 | 582 | 1 | 557 | 4.94e-148 | 439 |
| Msa0671600 | MtrunA17_Chr7g0218851 | 43.423 | 555 | 299 | 8 | 32 | 582 | 41 | 584 | 6.58e-142 | 424 |
| Msa0671600 | MtrunA17_Chr8g0375311 | 36.565 | 588 | 351 | 8 | 2 | 580 | 6 | 580 | 4.54e-131 | 395 |
| Msa0671600 | MtrunA17_Chr8g0375351 | 35.304 | 575 | 359 | 6 | 11 | 580 | 14 | 580 | 3.25e-125 | 380 |
| Msa0671600 | MtrunA17_Chr8g0375291 | 36.724 | 580 | 351 | 8 | 4 | 576 | 6 | 576 | 1.67e-124 | 379 |
| Msa0671600 | MtrunA17_Chr8g0375341 | 35.243 | 576 | 358 | 7 | 11 | 580 | 14 | 580 | 9.42e-124 | 377 |
| Msa0671600 | MtrunA17_Chr7g0241741 | 35.273 | 567 | 343 | 12 | 23 | 580 | 8 | 559 | 2.19e-118 | 362 |
| Msa0671600 | MtrunA17_Chr8g0375321 | 34.305 | 583 | 365 | 8 | 4 | 580 | 7 | 577 | 7.48e-117 | 358 |
| Msa0671600 | MtrunA17_Chr8g0375361 | 35.294 | 578 | 359 | 7 | 8 | 580 | 12 | 579 | 7.76e-117 | 358 |
| Msa0671600 | MtrunA17_Chr4g0005901 | 35.395 | 582 | 353 | 11 | 5 | 579 | 3 | 568 | 2.47e-116 | 357 |
| Msa0671600 | MtrunA17_Chr3g0104011 | 36.615 | 579 | 336 | 13 | 13 | 579 | 1 | 560 | 7.64e-116 | 355 |
| Msa0671600 | MtrunA17_Chr8g0375331 | 35.026 | 571 | 358 | 6 | 15 | 580 | 2 | 564 | 1.28e-115 | 355 |
| Msa0671600 | MtrunA17_Chr5g0399061 | 34.643 | 560 | 348 | 8 | 29 | 579 | 19 | 569 | 9.74e-111 | 343 |
| Msa0671600 | MtrunA17_Chr7g0261811 | 33.100 | 571 | 359 | 9 | 16 | 577 | 6 | 562 | 3.29e-110 | 342 |
| Msa0671600 | MtrunA17_Chr7g0261881 | 32.807 | 570 | 362 | 8 | 16 | 577 | 6 | 562 | 4.41e-110 | 342 |
| Msa0671600 | MtrunA17_Chr7g0261791 | 34.429 | 578 | 354 | 10 | 11 | 577 | 2 | 565 | 1.02e-109 | 341 |
| Msa0671600 | MtrunA17_Chr1g0166791 | 33.746 | 566 | 352 | 7 | 23 | 579 | 10 | 561 | 1.50e-109 | 340 |
| Msa0671600 | MtrunA17_Chr7g0261771 | 33.045 | 578 | 363 | 9 | 11 | 577 | 2 | 566 | 2.22e-109 | 340 |
| Msa0671600 | MtrunA17_Chr3g0142101 | 31.588 | 573 | 372 | 8 | 12 | 581 | 10 | 565 | 1.32e-105 | 330 |
| Msa0671600 | MtrunA17_Chr1g0187241 | 32.007 | 578 | 364 | 8 | 15 | 579 | 2 | 563 | 4.01e-104 | 326 |
| Msa0671600 | MtrunA17_Chr1g0166711 | 32.812 | 576 | 363 | 7 | 13 | 579 | 1 | 561 | 2.16e-103 | 324 |
| Msa0671600 | MtrunA17_Chr1g0166741 | 32.188 | 553 | 355 | 8 | 15 | 564 | 4 | 539 | 8.98e-103 | 322 |
| Msa0671600 | MtrunA17_Chr3g0142091 | 32.750 | 571 | 366 | 8 | 14 | 581 | 3 | 558 | 2.49e-101 | 318 |
| Msa0671600 | MtrunA17_Chr7g0261851 | 33.276 | 577 | 364 | 8 | 11 | 579 | 2 | 565 | 2.58e-101 | 319 |
| Msa0671600 | MtrunA17_Chr5g0399071 | 32.558 | 559 | 361 | 5 | 29 | 579 | 17 | 567 | 9.70e-101 | 317 |
| Msa0671600 | MtrunA17_Chr4g0014871 | 31.972 | 563 | 345 | 9 | 25 | 579 | 18 | 550 | 3.28e-97 | 307 |
| Msa0671600 | MtrunA17_Chr4g0063591 | 35.752 | 565 | 345 | 11 | 21 | 580 | 6 | 557 | 4.51e-96 | 305 |
| Msa0671600 | MtrunA17_Chr3g0114501 | 32.042 | 568 | 358 | 10 | 23 | 579 | 8 | 558 | 1.48e-95 | 303 |
| Msa0671600 | MtrunA17_Chr1g0166771 | 32.809 | 509 | 326 | 6 | 58 | 564 | 12 | 506 | 1.53e-95 | 302 |
| Msa0671600 | MtrunA17_Chr3g0112671 | 30.526 | 570 | 376 | 8 | 11 | 579 | 7 | 557 | 2.09e-93 | 298 |
| Msa0671600 | MtrunA17_Chr4g0056431 | 32.860 | 563 | 357 | 11 | 29 | 579 | 17 | 570 | 5.61e-92 | 294 |
| Msa0671600 | MtrunA17_Chr4g0014791 | 31.083 | 563 | 347 | 9 | 25 | 579 | 17 | 546 | 7.00e-90 | 288 |
| Msa0671600 | MtrunA17_Chr3g0077151 | 33.275 | 568 | 327 | 12 | 23 | 579 | 14 | 540 | 4.99e-89 | 285 |
| Msa0671600 | MtrunA17_Chr4g0014841 | 31.937 | 573 | 345 | 12 | 22 | 582 | 14 | 553 | 1.81e-88 | 284 |
| Msa0671600 | MtrunA17_Chr7g0240381 | 29.137 | 556 | 376 | 8 | 25 | 579 | 17 | 555 | 5.67e-87 | 281 |
| Msa0671600 | MtrunA17_Chr4g0008651 | 29.381 | 582 | 392 | 11 | 1 | 579 | 1 | 566 | 1.30e-86 | 280 |
| Msa0671600 | MtrunA17_Chr4g0014801 | 31.261 | 563 | 348 | 10 | 25 | 579 | 17 | 548 | 2.79e-86 | 278 |
| Msa0671600 | MtrunA17_Chr2g0276751 | 31.746 | 567 | 358 | 10 | 15 | 579 | 21 | 560 | 1.80e-84 | 275 |
| Msa0671600 | MtrunA17_Chr5g0422881 | 30.561 | 553 | 363 | 7 | 37 | 579 | 20 | 561 | 2.44e-84 | 274 |
| Msa0671600 | MtrunA17_Chr4g0014781 | 31.373 | 561 | 350 | 9 | 25 | 579 | 17 | 548 | 5.15e-83 | 270 |
| Msa0671600 | MtrunA17_Chr3g0133341 | 29.537 | 562 | 359 | 9 | 33 | 580 | 10 | 548 | 5.76e-82 | 267 |
| Msa0671600 | MtrunA17_Chr3g0112611 | 26.795 | 571 | 398 | 8 | 15 | 579 | 10 | 566 | 2.02e-80 | 264 |
| Msa0671600 | MtrunA17_Chr7g0261751 | 31.633 | 490 | 292 | 8 | 11 | 463 | 2 | 485 | 8.04e-79 | 258 |
| Msa0671600 | MtrunA17_Chr7g0240271 | 29.055 | 561 | 389 | 5 | 24 | 579 | 11 | 567 | 1.33e-78 | 259 |
| Msa0671600 | MtrunA17_Chr8g0353031 | 29.856 | 556 | 349 | 11 | 39 | 580 | 20 | 548 | 2.41e-78 | 258 |
| Msa0671600 | MtrunA17_Chr7g0255621 | 29.167 | 576 | 387 | 9 | 13 | 580 | 1 | 563 | 4.62e-78 | 258 |
| Msa0671600 | MtrunA17_Chr1g0193391 | 28.929 | 560 | 376 | 9 | 25 | 580 | 3 | 544 | 1.84e-77 | 256 |
| Msa0671600 | MtrunA17_Chr5g0415791 | 29.242 | 554 | 373 | 8 | 37 | 579 | 29 | 574 | 8.07e-77 | 255 |
| Msa0671600 | MtrunA17_Chr2g0284701 | 30.465 | 581 | 366 | 15 | 25 | 580 | 19 | 586 | 8.16e-77 | 254 |
| Msa0671600 | MtrunA17_Chr1g0166731 | 33.333 | 465 | 286 | 7 | 124 | 579 | 9 | 458 | 1.55e-76 | 250 |
| Msa0671600 | MtrunA17_Chr5g0439381 | 29.021 | 572 | 383 | 6 | 12 | 580 | 3 | 554 | 3.82e-76 | 253 |
| Msa0671600 | MtrunA17_Chr7g0214731 | 27.574 | 573 | 382 | 11 | 28 | 580 | 51 | 610 | 6.54e-76 | 253 |
| Msa0671600 | MtrunA17_Chr4g0059981 | 29.091 | 550 | 371 | 8 | 43 | 580 | 37 | 579 | 7.83e-76 | 252 |
| Msa0671600 | MtrunA17_Chr7g0255601 | 29.725 | 545 | 365 | 9 | 41 | 576 | 31 | 566 | 2.49e-75 | 251 |
| Msa0671600 | MtrunA17_Chr5g0415961 | 29.913 | 575 | 368 | 12 | 25 | 580 | 12 | 570 | 6.14e-75 | 249 |
| Msa0671600 | MtrunA17_Chr7g0261661 | 32.826 | 460 | 288 | 8 | 128 | 579 | 4 | 450 | 8.13e-75 | 246 |
| Msa0671600 | MtrunA17_Chr7g0255611 | 29.590 | 561 | 375 | 10 | 24 | 575 | 18 | 567 | 2.09e-74 | 248 |
| Msa0671600 | MtrunA17_Chr4g0069581 | 30.476 | 525 | 347 | 7 | 58 | 580 | 7 | 515 | 2.23e-74 | 247 |
| Msa0671600 | MtrunA17_Chr7g0271221 | 29.144 | 549 | 363 | 9 | 37 | 580 | 17 | 544 | 2.18e-73 | 245 |
| Msa0671600 | MtrunA17_Chr4g0059991 | 28.064 | 563 | 379 | 10 | 36 | 581 | 21 | 574 | 3.38e-71 | 239 |
| Msa0671600 | MtrunA17_Chr8g0390331 | 29.496 | 556 | 364 | 13 | 36 | 579 | 14 | 553 | 8.51e-70 | 235 |
| Msa0671600 | MtrunA17_Chr8g0362781 | 26.834 | 559 | 391 | 9 | 33 | 579 | 26 | 578 | 1.34e-69 | 235 |
| Msa0671600 | MtrunA17_Chr8g0379971 | 29.642 | 587 | 377 | 11 | 25 | 580 | 8 | 589 | 1.93e-69 | 235 |
| Msa0671600 | MtrunA17_Chr4g0014861 | 31.973 | 441 | 269 | 10 | 154 | 582 | 11 | 432 | 6.35e-69 | 229 |
| Msa0671600 | MtrunA17_Chr4g0060001 | 27.225 | 573 | 404 | 8 | 15 | 579 | 2 | 569 | 7.68e-68 | 231 |
| Msa0671600 | MtrunA17_Chr4g0059971 | 25.299 | 585 | 419 | 8 | 5 | 580 | 7 | 582 | 7.04e-67 | 228 |
| Msa0671600 | MtrunA17_Chr1g0157611 | 28.210 | 553 | 375 | 10 | 36 | 579 | 15 | 554 | 9.36e-67 | 227 |
| Msa0671600 | MtrunA17_Chr8g0362711 | 29.307 | 563 | 384 | 9 | 26 | 580 | 13 | 569 | 5.98e-66 | 225 |
| Msa0671600 | MtrunA17_Chr1g0157601 | 27.536 | 552 | 376 | 12 | 38 | 579 | 16 | 553 | 5.13e-65 | 222 |
| Msa0671600 | MtrunA17_Chr2g0325951 | 28.445 | 566 | 373 | 11 | 25 | 580 | 2 | 545 | 2.66e-64 | 220 |
| Msa0671600 | MtrunA17_Chr2g0326211 | 27.562 | 566 | 378 | 11 | 25 | 580 | 2 | 545 | 1.02e-63 | 218 |
| Msa0671600 | MtrunA17_Chr7g0261731 | 32.676 | 355 | 222 | 5 | 13 | 361 | 4 | 347 | 5.55e-63 | 211 |
| Msa0671600 | MtrunA17_Chr2g0331521 | 26.895 | 554 | 382 | 13 | 37 | 579 | 22 | 563 | 1.71e-61 | 213 |
| Msa0671600 | MtrunA17_Chr1g0147631 | 28.933 | 553 | 368 | 12 | 41 | 582 | 29 | 567 | 6.56e-61 | 212 |
| Msa0671600 | MtrunA17_Chr7g0240281 | 26.874 | 547 | 391 | 5 | 37 | 577 | 24 | 567 | 1.15e-60 | 211 |
| Msa0671600 | MtrunA17_Chr8g0379991 | 29.326 | 549 | 329 | 12 | 81 | 580 | 24 | 562 | 1.34e-60 | 211 |
| Msa0671600 | MtrunA17_Chr7g0240211 | 29.476 | 458 | 312 | 7 | 128 | 579 | 4 | 456 | 5.24e-59 | 204 |
| Msa0671600 | MtrunA17_Chr2g0325961 | 28.269 | 566 | 375 | 10 | 25 | 580 | 2 | 546 | 6.22e-59 | 206 |
| Msa0671600 | MtrunA17_Chr7g0235521 | 28.884 | 457 | 316 | 5 | 128 | 579 | 4 | 456 | 6.99e-59 | 204 |
| Msa0671600 | MtrunA17_Chr7g0240181 | 29.476 | 458 | 312 | 7 | 128 | 579 | 4 | 456 | 7.59e-59 | 204 |
| Msa0671600 | MtrunA17_Chr7g0240131 | 29.258 | 458 | 313 | 7 | 128 | 579 | 4 | 456 | 2.70e-58 | 202 |
| Msa0671600 | MtrunA17_Chr4g0003761 | 25.806 | 589 | 407 | 13 | 1 | 579 | 1 | 569 | 3.86e-58 | 204 |
| Msa0671600 | MtrunA17_Chr1g0157621 | 26.843 | 529 | 360 | 11 | 62 | 579 | 5 | 517 | 7.45e-58 | 203 |
| Msa0671600 | MtrunA17_Chr3g0142111 | 33.007 | 306 | 201 | 3 | 14 | 317 | 23 | 326 | 3.48e-56 | 192 |
| Msa0671600 | MtrunA17_Chr8g0362801 | 28.817 | 465 | 316 | 9 | 125 | 580 | 1 | 459 | 3.80e-56 | 196 |
| Msa0671600 | MtrunA17_Chr3g0082631 | 28.200 | 461 | 309 | 7 | 133 | 579 | 4 | 456 | 1.29e-55 | 195 |
| Msa0671600 | MtrunA17_Chr7g0240151 | 29.039 | 458 | 296 | 8 | 128 | 579 | 4 | 438 | 5.80e-54 | 190 |
| Msa0671600 | MtrunA17_Chr2g0331481 | 26.032 | 557 | 389 | 12 | 33 | 579 | 23 | 566 | 6.05e-53 | 191 |
| Msa0671600 | MtrunA17_Chr2g0331471 | 26.580 | 538 | 374 | 12 | 52 | 579 | 103 | 629 | 1.91e-52 | 191 |
| Msa0671600 | MtrunA17_Chr1g0177591 | 26.111 | 540 | 361 | 14 | 49 | 579 | 54 | 564 | 1.29e-51 | 186 |
| Msa0671600 | MtrunA17_Chr6g0451841 | 28.182 | 550 | 353 | 12 | 44 | 579 | 12 | 533 | 2.47e-51 | 184 |
| Msa0671600 | MtrunA17_Chr2g0331511 | 24.119 | 539 | 392 | 10 | 49 | 579 | 33 | 562 | 2.42e-49 | 181 |
| Msa0671600 | MtrunA17_Chr5g0415841 | 26.439 | 469 | 323 | 10 | 122 | 580 | 1 | 457 | 3.08e-48 | 174 |
| Msa0671600 | MtrunA17_Chr1g0177611 | 26.027 | 438 | 303 | 10 | 147 | 579 | 14 | 435 | 1.51e-43 | 161 |
| Msa0671600 | MtrunA17_Chr3g0112631 | 30.216 | 278 | 175 | 6 | 310 | 579 | 3 | 269 | 2.25e-43 | 157 |
| Msa0671600 | MtrunA17_Chr2g0331461 | 25.179 | 560 | 390 | 14 | 33 | 579 | 23 | 566 | 4.50e-42 | 160 |
| Msa0671600 | MtrunA17_Chr1g0177631 | 25.968 | 439 | 302 | 12 | 147 | 579 | 14 | 435 | 9.25e-41 | 153 |
| Msa0671600 | MtrunA17_Chr3g0142121 | 32.353 | 272 | 168 | 6 | 311 | 581 | 11 | 267 | 1.83e-38 | 143 |
| Msa0671600 | MtrunA17_Chr7g0234381 | 28.671 | 429 | 253 | 12 | 161 | 579 | 33 | 418 | 2.05e-36 | 140 |
| Msa0671600 | MtrunA17_Chr7g0234181 | 27.982 | 436 | 247 | 10 | 161 | 579 | 28 | 413 | 6.77e-36 | 139 |
| Msa0671600 | MtrunA17_Chr7g0234151 | 28.169 | 426 | 253 | 12 | 164 | 579 | 36 | 418 | 1.15e-34 | 135 |
| Msa0671600 | MtrunA17_Chr4g0060071 | 30.894 | 246 | 163 | 4 | 340 | 580 | 53 | 296 | 1.26e-32 | 127 |
| Msa0671600 | MtrunA17_Chr7g0261721 | 34.536 | 194 | 121 | 3 | 388 | 577 | 5 | 196 | 8.49e-29 | 114 |
| Msa0671600 | MtrunA17_Chr7g0261671 | 36.207 | 116 | 71 | 1 | 11 | 123 | 3 | 118 | 2.08e-21 | 90.1 |
| Msa0671600 | MtrunA17_Chr3g0112651 | 28.272 | 191 | 126 | 3 | 124 | 311 | 21 | 203 | 4.55e-19 | 86.3 |
| Msa0671600 | MtrunA17_Chr1g0166721 | 33.333 | 120 | 76 | 1 | 13 | 128 | 1 | 120 | 1.09e-17 | 80.1 |
| Msa0671600 | MtrunA17_Chr4g0014851 | 37.374 | 99 | 62 | 0 | 25 | 123 | 18 | 116 | 1.22e-17 | 80.5 |
| Msa0671600 | MtrunA17_Chr4g0060061 | 31.356 | 118 | 81 | 0 | 147 | 264 | 6 | 123 | 7.92e-16 | 74.3 |
| Msa0671600 | MtrunA17_Chr7g0261831 | 28.105 | 153 | 96 | 3 | 268 | 417 | 3 | 144 | 5.78e-15 | 74.3 |
| Msa0671600 | MtrunA17_Chr1g0147591 | 22.500 | 200 | 145 | 4 | 166 | 362 | 9 | 201 | 3.08e-14 | 72.0 |
| Msa0671600 | MtrunA17_Chr2g0326221 | 24.034 | 233 | 149 | 5 | 349 | 580 | 16 | 221 | 3.42e-13 | 69.3 |
| Msa0671600 | MtrunA17_Chr3g0112661 | 35.354 | 99 | 64 | 0 | 25 | 123 | 19 | 117 | 9.06e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671600 | AT1G32450.1 | 46.939 | 588 | 292 | 7 | 4 | 582 | 8 | 584 | 6.45e-179 | 519 |
| Msa0671600 | AT4G21680.1 | 46.831 | 568 | 290 | 5 | 22 | 582 | 11 | 573 | 1.00e-167 | 490 |
| Msa0671600 | AT5G19640.1 | 41.217 | 575 | 314 | 7 | 11 | 582 | 31 | 584 | 1.27e-147 | 439 |
| Msa0671600 | AT2G02040.1 | 36.637 | 565 | 341 | 7 | 23 | 580 | 25 | 579 | 8.73e-128 | 387 |
| Msa0671600 | AT1G62200.1 | 34.932 | 584 | 366 | 8 | 1 | 580 | 13 | 586 | 6.13e-121 | 370 |
| Msa0671600 | AT3G54140.1 | 35.993 | 564 | 345 | 9 | 23 | 580 | 8 | 561 | 1.23e-119 | 366 |
| Msa0671600 | AT3G54140.2 | 35.993 | 564 | 345 | 9 | 23 | 580 | 8 | 561 | 1.23e-119 | 366 |
| Msa0671600 | AT5G01180.2 | 35.346 | 563 | 347 | 10 | 23 | 579 | 9 | 560 | 3.38e-116 | 357 |
| Msa0671600 | AT5G01180.3 | 35.346 | 563 | 347 | 10 | 23 | 579 | 9 | 560 | 3.38e-116 | 357 |
| Msa0671600 | AT5G01180.1 | 35.346 | 563 | 347 | 10 | 23 | 579 | 9 | 560 | 3.38e-116 | 357 |
| Msa0671600 | AT1G62200.2 | 33.442 | 613 | 365 | 9 | 1 | 580 | 13 | 615 | 3.79e-115 | 356 |
| Msa0671600 | AT1G62200.3 | 33.442 | 613 | 365 | 9 | 1 | 580 | 27 | 629 | 7.22e-115 | 355 |
| Msa0671600 | AT2G26690.1 | 34.159 | 565 | 359 | 7 | 18 | 580 | 3 | 556 | 1.06e-104 | 327 |
| Msa0671600 | AT5G46040.1 | 32.437 | 558 | 353 | 9 | 13 | 562 | 3 | 544 | 8.85e-104 | 325 |
| Msa0671600 | AT2G02020.1 | 32.180 | 578 | 338 | 8 | 7 | 579 | 12 | 540 | 4.78e-102 | 319 |
| Msa0671600 | AT5G46050.1 | 33.333 | 564 | 340 | 10 | 13 | 562 | 3 | 544 | 5.04e-101 | 318 |
| Msa0671600 | AT2G26690.3 | 34.357 | 521 | 329 | 7 | 62 | 580 | 2 | 511 | 5.01e-97 | 306 |
| Msa0671600 | AT2G26690.2 | 34.357 | 521 | 329 | 7 | 62 | 580 | 14 | 523 | 8.63e-97 | 306 |
| Msa0671600 | AT2G37900.1 | 30.412 | 582 | 387 | 10 | 4 | 582 | 2 | 568 | 5.47e-94 | 299 |
| Msa0671600 | AT1G12110.1 | 33.453 | 559 | 355 | 8 | 29 | 579 | 17 | 566 | 1.24e-93 | 299 |
| Msa0671600 | AT2G02020.2 | 31.142 | 578 | 323 | 10 | 7 | 579 | 12 | 519 | 1.57e-91 | 291 |
| Msa0671600 | AT3G53960.1 | 29.032 | 558 | 383 | 8 | 25 | 579 | 23 | 570 | 2.80e-87 | 283 |
| Msa0671600 | AT1G59740.1 | 31.100 | 582 | 380 | 9 | 5 | 577 | 3 | 572 | 5.75e-87 | 281 |
| Msa0671600 | AT1G69870.1 | 30.309 | 551 | 372 | 9 | 36 | 580 | 48 | 592 | 7.45e-86 | 279 |
| Msa0671600 | AT2G37900.2 | 31.809 | 503 | 326 | 9 | 82 | 582 | 2 | 489 | 2.98e-84 | 271 |
| Msa0671600 | AT3G54450.1 | 29.264 | 557 | 353 | 9 | 37 | 579 | 10 | 539 | 2.97e-83 | 271 |
| Msa0671600 | AT2G40460.1 | 29.965 | 564 | 369 | 9 | 23 | 579 | 8 | 552 | 7.73e-83 | 270 |
| Msa0671600 | AT1G72140.1 | 30.360 | 583 | 348 | 13 | 14 | 579 | 8 | 549 | 1.51e-80 | 264 |
| Msa0671600 | AT1G22540.1 | 31.429 | 560 | 349 | 10 | 27 | 579 | 18 | 549 | 2.14e-78 | 258 |
| Msa0671600 | AT5G13400.1 | 28.671 | 572 | 375 | 11 | 28 | 580 | 52 | 609 | 3.19e-78 | 259 |
| Msa0671600 | AT1G72130.1 | 31.512 | 549 | 329 | 12 | 37 | 579 | 23 | 530 | 4.54e-78 | 256 |
| Msa0671600 | AT1G68570.1 | 30.435 | 575 | 379 | 9 | 15 | 579 | 2 | 565 | 2.63e-77 | 256 |
| Msa0671600 | AT3G21670.1 | 30.195 | 563 | 370 | 8 | 24 | 580 | 11 | 556 | 5.76e-76 | 253 |
| Msa0671600 | AT1G68570.2 | 31.227 | 538 | 352 | 7 | 52 | 579 | 6 | 535 | 5.88e-76 | 252 |
| Msa0671600 | AT1G27080.1 | 29.670 | 546 | 363 | 10 | 41 | 580 | 16 | 546 | 9.16e-76 | 251 |
| Msa0671600 | AT1G72120.1 | 29.078 | 564 | 358 | 12 | 27 | 579 | 17 | 549 | 1.08e-75 | 251 |
| Msa0671600 | AT1G72125.1 | 29.433 | 564 | 360 | 12 | 27 | 579 | 17 | 553 | 1.32e-75 | 251 |
| Msa0671600 | AT5G28470.2 | 28.336 | 547 | 382 | 6 | 36 | 579 | 14 | 553 | 6.64e-73 | 244 |
| Msa0671600 | AT5G46050.2 | 33.186 | 452 | 268 | 9 | 125 | 562 | 1 | 432 | 1.18e-72 | 240 |
| Msa0671600 | AT1G33440.1 | 31.495 | 562 | 360 | 13 | 25 | 579 | 24 | 567 | 3.19e-72 | 243 |
| Msa0671600 | AT1G22570.1 | 28.470 | 562 | 365 | 9 | 11 | 560 | 2 | 538 | 1.70e-71 | 240 |
| Msa0671600 | AT5G28470.1 | 27.788 | 547 | 383 | 6 | 36 | 579 | 14 | 551 | 5.30e-71 | 238 |
| Msa0671600 | AT1G18880.1 | 27.617 | 554 | 379 | 10 | 43 | 582 | 23 | 568 | 5.39e-71 | 239 |
| Msa0671600 | AT3G16180.1 | 29.840 | 563 | 357 | 16 | 37 | 579 | 21 | 565 | 7.24e-71 | 239 |
| Msa0671600 | AT1G52190.1 | 28.419 | 563 | 368 | 12 | 37 | 579 | 19 | 566 | 6.52e-70 | 237 |
| Msa0671600 | AT1G22550.1 | 28.547 | 585 | 370 | 11 | 12 | 579 | 3 | 556 | 5.90e-69 | 233 |
| Msa0671600 | AT1G27080.2 | 29.094 | 519 | 347 | 10 | 68 | 580 | 1 | 504 | 1.53e-68 | 231 |
| Msa0671600 | AT5G14940.1 | 29.277 | 567 | 346 | 13 | 37 | 580 | 5 | 539 | 3.08e-67 | 228 |
| Msa0671600 | AT1G27040.1 | 28.423 | 577 | 388 | 9 | 13 | 582 | 3 | 561 | 4.73e-67 | 228 |
| Msa0671600 | AT1G27040.2 | 28.496 | 565 | 381 | 8 | 25 | 582 | 9 | 557 | 1.29e-66 | 227 |
| Msa0671600 | AT5G62680.1 | 26.439 | 556 | 383 | 10 | 43 | 581 | 47 | 593 | 1.59e-66 | 228 |
| Msa0671600 | AT1G69850.1 | 27.759 | 598 | 379 | 10 | 13 | 580 | 3 | 577 | 7.21e-65 | 223 |
| Msa0671600 | AT1G22570.2 | 28.016 | 514 | 333 | 9 | 59 | 560 | 13 | 501 | 8.05e-64 | 218 |
| Msa0671600 | AT3G45710.1 | 26.433 | 541 | 376 | 9 | 41 | 580 | 23 | 542 | 5.62e-63 | 217 |
| Msa0671600 | AT1G27040.3 | 28.571 | 532 | 357 | 8 | 58 | 582 | 14 | 529 | 2.73e-62 | 214 |
| Msa0671600 | AT3G45660.1 | 26.018 | 565 | 385 | 10 | 21 | 580 | 4 | 540 | 2.98e-62 | 215 |
| Msa0671600 | AT3G45660.3 | 26.018 | 565 | 385 | 10 | 21 | 580 | 4 | 540 | 2.98e-62 | 215 |
| Msa0671600 | AT3G45660.2 | 26.018 | 565 | 385 | 10 | 21 | 580 | 25 | 561 | 4.33e-62 | 215 |
| Msa0671600 | AT3G47960.1 | 27.061 | 558 | 375 | 14 | 43 | 581 | 65 | 609 | 6.07e-62 | 216 |
| Msa0671600 | AT3G45680.1 | 26.212 | 557 | 386 | 10 | 25 | 580 | 8 | 540 | 7.54e-62 | 214 |
| Msa0671600 | AT5G62730.1 | 27.257 | 565 | 377 | 7 | 25 | 579 | 42 | 582 | 1.30e-61 | 214 |
| Msa0671600 | AT3G45720.1 | 25.430 | 523 | 364 | 10 | 56 | 576 | 36 | 534 | 2.99e-60 | 209 |
| Msa0671600 | AT3G45650.1 | 25.088 | 566 | 392 | 8 | 20 | 580 | 3 | 541 | 2.88e-58 | 204 |
| Msa0671600 | AT5G62730.2 | 26.972 | 545 | 364 | 7 | 45 | 579 | 3 | 523 | 1.19e-56 | 199 |
| Msa0671600 | AT3G01350.1 | 26.910 | 576 | 358 | 11 | 37 | 580 | 5 | 549 | 3.29e-56 | 199 |
| Msa0671600 | AT3G45700.1 | 24.368 | 554 | 389 | 10 | 29 | 580 | 5 | 530 | 7.84e-56 | 197 |
| Msa0671600 | AT1G72130.2 | 29.556 | 450 | 273 | 11 | 136 | 579 | 1 | 412 | 8.36e-56 | 194 |
| Msa0671600 | AT1G72130.3 | 29.556 | 450 | 273 | 11 | 136 | 579 | 1 | 412 | 8.36e-56 | 194 |
| Msa0671600 | AT3G45650.2 | 23.986 | 592 | 392 | 9 | 20 | 580 | 3 | 567 | 9.17e-53 | 190 |
| Msa0671600 | AT3G45690.1 | 25.806 | 558 | 346 | 15 | 27 | 580 | 4 | 497 | 1.26e-52 | 188 |
| Msa0671600 | AT1G69860.1 | 25.872 | 545 | 378 | 11 | 43 | 580 | 22 | 547 | 1.88e-50 | 183 |
| Msa0671600 | AT3G25280.1 | 26.025 | 561 | 355 | 13 | 29 | 579 | 11 | 521 | 1.06e-49 | 180 |
| Msa0671600 | AT3G25260.1 | 24.231 | 553 | 369 | 11 | 29 | 579 | 11 | 515 | 1.10e-49 | 180 |
| Msa0671600 | AT2G38100.2 | 22.986 | 509 | 354 | 12 | 75 | 579 | 10 | 484 | 3.05e-27 | 115 |
| Msa0671600 | AT2G38100.1 | 22.986 | 509 | 354 | 12 | 75 | 579 | 26 | 500 | 5.96e-27 | 115 |
| Msa0671600 | AT2G38100.3 | 22.986 | 509 | 354 | 12 | 75 | 579 | 32 | 506 | 6.58e-27 | 115 |
| Msa0671600 | AT5G11570.1 | 30.488 | 246 | 161 | 6 | 336 | 579 | 239 | 476 | 2.00e-25 | 110 |
| Msa0671600 | AT5G11570.1 | 24.645 | 211 | 153 | 3 | 49 | 257 | 23 | 229 | 3.89e-18 | 87.8 |
Find 132 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTATTTCTTCTCTTTAAT+TGG | 0.108015 | 4_4:+15318461 | Msa0671600:CDS |
| CGCAGGAGTGGAGGCAAATT+TGG | 0.185968 | 4_4:+15318364 | Msa0671600:CDS |
| GCCTTGGATCTTTGTTCTTT+AGG | 0.210052 | 4_4:-15319766 | None:intergenic |
| ACATACGAACCAGTAGATTT+AGG | 0.215294 | 4_4:+15317013 | Msa0671600:five_prime_UTR |
| GACATTGGGTGCTTGGATTC+TGG | 0.219716 | 4_4:+15319872 | Msa0671600:CDS |
| AGATCCAAGGCCTCAATTTA+TGG | 0.235422 | 4_4:+15319778 | Msa0671600:CDS |
| TTATATGCCCTTGTATCTTT+TGG | 0.252904 | 4_4:-15322012 | None:intergenic |
| AAGATACAAGGGCATATAAT+TGG | 0.269835 | 4_4:+15322016 | Msa0671600:exon |
| TACAGACACTATAAGACTTT+TGG | 0.287136 | 4_4:+15319952 | Msa0671600:CDS |
| TGTAGCTCGGTAGGAAGTTT+TGG | 0.311952 | 4_4:-15321561 | None:intergenic |
| TTGGAGAATGAGATTGCAAT+AGG | 0.319289 | 4_4:-15322349 | None:intergenic |
| ATTGGTTGCTGAGACTATAT+TGG | 0.326940 | 4_4:+15319831 | Msa0671600:CDS |
| ATCATAACATTGATTGTTGC+TGG | 0.330590 | 4_4:+15321612 | Msa0671600:CDS |
| TCCAATTAAAGAGAAGAAAT+AGG | 0.340141 | 4_4:-15318462 | None:intergenic |
| CATACGAACCAGTAGATTTA+GGG | 0.351552 | 4_4:+15317014 | Msa0671600:five_prime_UTR |
| AAATTTCAAATACAATCAAT+TGG | 0.357133 | 4_4:+15320027 | Msa0671600:CDS |
| TAAATGATGGTCATTTAGAT+AGG | 0.361054 | 4_4:+15321931 | Msa0671600:CDS |
| TCCAGATGGTTTGGAAAGCT+TGG | 0.370188 | 4_4:+15321788 | Msa0671600:CDS |
| ATCAATTCCTGTACAAAAGA+TGG | 0.380758 | 4_4:+15317331 | Msa0671600:CDS |
| CCACATCGTTGTGAACAAAT+AGG | 0.380773 | 4_4:+15319610 | Msa0671600:CDS |
| CATCTCTTTACCATCATTGC+TGG | 0.384744 | 4_4:-15321664 | None:intergenic |
| GTAGCCATAAATTGAGGCCT+TGG | 0.385297 | 4_4:-15319782 | None:intergenic |
| TTTCTCAGTGACTCATATCT+AGG | 0.391794 | 4_4:+15318488 | Msa0671600:CDS |
| GGTTTGGAAAGCTTGGGAAT+GGG | 0.392053 | 4_4:+15321795 | Msa0671600:CDS |
| GGCATTGAACTTGGGATCAT+TGG | 0.393054 | 4_4:+15319813 | Msa0671600:CDS |
| TCGTGTTTCTCTCAGATCAT+TGG | 0.403540 | 4_4:+15322318 | Msa0671600:three_prime_UTR |
| AATTTCAAATACAATCAATT+GGG | 0.408308 | 4_4:+15320028 | Msa0671600:CDS |
| TGTAAGGTTGTTGAAGAAGA+GGG | 0.410003 | 4_4:+15317304 | Msa0671600:intron |
| TACTGGTTCGTATGTTGGTT+TGG | 0.410542 | 4_4:-15317005 | None:intergenic |
| AGAAGTGCCACATTGTTGTT+AGG | 0.414826 | 4_4:+15317406 | Msa0671600:CDS |
| GTTGTGAAAACTTAGAGAAA+GGG | 0.416740 | 4_4:-15319978 | None:intergenic |
| ATGTCTACAATCAGAAACTA+TGG | 0.417291 | 4_4:-15322150 | None:intergenic |
| GTCACAAACTCCAGATGGTT+TGG | 0.418889 | 4_4:+15321779 | Msa0671600:CDS |
| ACTACAGGACATTGGGTGCT+TGG | 0.420293 | 4_4:+15319865 | Msa0671600:CDS |
| AAGATTGTGCAAAACCATAT+TGG | 0.420486 | 4_4:-15321348 | None:intergenic |
| CTCTACCACGACGGTATTCA+AGG | 0.421147 | 4_4:+15320057 | Msa0671600:CDS |
| GTTTGGAAAGCTTGGGAATG+GGG | 0.423675 | 4_4:+15321796 | Msa0671600:CDS |
| AAATGACCATCATTTAGATT+AGG | 0.434159 | 4_4:-15321924 | None:intergenic |
| CCCAAGCTTTCCAAACCATC+TGG | 0.434567 | 4_4:-15321789 | None:intergenic |
| AATTGGAGAAAAGAGAAGAT+AGG | 0.442444 | 4_4:+15322033 | Msa0671600:exon |
| TCAAATGCTGTCATGCTTGA+AGG | 0.446123 | 4_4:-15321459 | None:intergenic |
| GAGCTATTAGATATATTGAT+AGG | 0.448423 | 4_4:-15319678 | None:intergenic |
| CGTATGTTGGTTTGGTTGGT+AGG | 0.448488 | 4_4:-15316997 | None:intergenic |
| GCACCAAGTGTTGGTAATGC+AGG | 0.448775 | 4_4:-15319721 | None:intergenic |
| CTATGCATTGTTGATAAGAA+TGG | 0.450469 | 4_4:+15317149 | Msa0671600:exon |
| TCATCACTTTAATATACAAT+GGG | 0.453981 | 4_4:-15321530 | None:intergenic |
| AGTTGTGAAAACTTAGAGAA+AGG | 0.454835 | 4_4:-15319979 | None:intergenic |
| AAATCTACTGGTTCGTATGT+TGG | 0.456113 | 4_4:-15317010 | None:intergenic |
| AGAGTGGTTTATAAGAAGGT+AGG | 0.459539 | 4_4:-15317125 | None:intergenic |
| CCAGATGGTTTGGAAAGCTT+GGG | 0.462004 | 4_4:+15321789 | Msa0671600:CDS |
| TGGTTTGGAAAGCTTGGGAA+TGG | 0.463077 | 4_4:+15321794 | Msa0671600:CDS |
| CATAGAGACTACAGGACATT+GGG | 0.463120 | 4_4:+15319858 | Msa0671600:CDS |
| AATATTGTTGTTGATATTGT+GGG | 0.466106 | 4_4:-15322386 | None:intergenic |
| TTACTATGATGAACACAAGT+TGG | 0.466550 | 4_4:-15318535 | None:intergenic |
| TGCAGTGGCTTTCGCAGGAG+TGG | 0.468532 | 4_4:+15318352 | Msa0671600:CDS |
| GTTTCACCTAATCTAAATGA+TGG | 0.478316 | 4_4:+15321918 | Msa0671600:CDS |
| TCCGCACTTGGTTGCTATGT+CGG | 0.479600 | 4_4:+15321834 | Msa0671600:CDS |
| CTTTCTCTATTTGTTGAGCA+AGG | 0.480145 | 4_4:+15321396 | Msa0671600:CDS |
| TAGGAGAGTGGTTTATAAGA+AGG | 0.480918 | 4_4:-15317129 | None:intergenic |
| GTTAAATATGTGGCCACCCT+TGG | 0.482512 | 4_4:-15322246 | None:intergenic |
| TTCATCACTTTAATATACAA+TGG | 0.486599 | 4_4:-15321531 | None:intergenic |
| GAAACTATGGCACCAAAGTC+AGG | 0.489019 | 4_4:-15322137 | None:intergenic |
| TGGAGAATGAGATTGCAATA+GGG | 0.491323 | 4_4:-15322348 | None:intergenic |
| GGTTCGTATGTTGGTTTGGT+TGG | 0.492274 | 4_4:-15317001 | None:intergenic |
| CTGGTTGCAGTGGCTTTCGC+AGG | 0.492804 | 4_4:+15318347 | Msa0671600:CDS |
| ATATGTGGCCACCCTTGGTA+AGG | 0.493895 | 4_4:-15322241 | None:intergenic |
| TCAATATATCTAATAGCTCT+AGG | 0.497358 | 4_4:+15319682 | Msa0671600:CDS |
| TGGTCAAGGACAACATGGTT+GGG | 0.502264 | 4_4:+15321896 | Msa0671600:CDS |
| GTAAGGTTGTTGAAGAAGAG+GGG | 0.503830 | 4_4:+15317305 | Msa0671600:intron |
| TTTATAAGAAGACATGTCAA+TGG | 0.503977 | 4_4:+15322208 | Msa0671600:three_prime_UTR |
| AAAATACTTTGTAGCTCGGT+AGG | 0.505762 | 4_4:-15321570 | None:intergenic |
| AAATATTGTTGTTGATATTG+TGG | 0.506203 | 4_4:-15322387 | None:intergenic |
| CAAGAAGGATGTCCTGACTT+TGG | 0.507108 | 4_4:+15322125 | Msa0671600:three_prime_UTR |
| TATCTAATAGCTCTAGGAAG+TGG | 0.508615 | 4_4:+15319688 | Msa0671600:CDS |
| TTGTAAGGTTGTTGAAGAAG+AGG | 0.510306 | 4_4:+15317303 | Msa0671600:intron |
| CGAACAAAATTTAGCGTCAC+AGG | 0.519909 | 4_4:+15317179 | Msa0671600:CDS |
| AGAAGAATACACCATGCAAA+TGG | 0.524359 | 4_4:+15320096 | Msa0671600:CDS |
| GACCCTGCATTACCAACACT+TGG | 0.525429 | 4_4:+15319718 | Msa0671600:CDS |
| TAAATTGTGACAGTGAATCA+AGG | 0.529647 | 4_4:+15318323 | Msa0671600:intron |
| AGAAGACGCCCTAAATCTAC+TGG | 0.532407 | 4_4:-15317022 | None:intergenic |
| TGTATGTGCCAAAAGATACA+AGG | 0.536921 | 4_4:+15322004 | Msa0671600:CDS |
| GATAGAATGACAAGTGGAGT+TGG | 0.539367 | 4_4:+15322073 | Msa0671600:three_prime_UTR |
| GTGGTCAAGGACAACATGGT+TGG | 0.539945 | 4_4:+15321895 | Msa0671600:CDS |
| CTGAAAACTAGTTAAATATG+TGG | 0.541672 | 4_4:-15322256 | None:intergenic |
| TTATAAGAAGACATGTCAAT+GGG | 0.544641 | 4_4:+15322209 | Msa0671600:three_prime_UTR |
| TACACCATGCAAATGGCCTC+AGG | 0.545327 | 4_4:+15320103 | Msa0671600:CDS |
| GATGAAAATACTTTGTAGCT+CGG | 0.547316 | 4_4:-15321574 | None:intergenic |
| ACTGAGATGTTACTAGGTAA+AGG | 0.549750 | 4_4:+15321252 | Msa0671600:CDS |
| AAAATTACATCAAGTGGTCA+AGG | 0.554424 | 4_4:+15321882 | Msa0671600:CDS |
| GTAAATAAAATTACATCAAG+TGG | 0.555312 | 4_4:+15321876 | Msa0671600:CDS |
| TCAATTCCTGTACAAAAGAT+GGG | 0.556331 | 4_4:+15317332 | Msa0671600:CDS |
| GAGGCAACTGAGATGTTACT+AGG | 0.559498 | 4_4:+15321246 | Msa0671600:CDS |
| TTCACGTCACAAACTCCAGA+TGG | 0.562555 | 4_4:+15321774 | Msa0671600:CDS |
| ACATAGAGACTACAGGACAT+TGG | 0.563249 | 4_4:+15319857 | Msa0671600:CDS |
| TCTACCACGACGGTATTCAA+GGG | 0.569386 | 4_4:+15320058 | Msa0671600:CDS |
| AGCTGGTATTGTTTCTGATG+AGG | 0.570990 | 4_4:+15321227 | Msa0671600:CDS |
| ATAAAAGTAGCCATAAATTG+AGG | 0.571302 | 4_4:-15319788 | None:intergenic |
| AGTGGCTTTCGCAGGAGTGG+AGG | 0.583063 | 4_4:+15318355 | Msa0671600:CDS |
| ATTTCAAATACAATCAATTG+GGG | 0.584684 | 4_4:+15320029 | Msa0671600:CDS |
| CACCAAGTGTTGGTAATGCA+GGG | 0.586553 | 4_4:-15319720 | None:intergenic |
| ATCAACAATGCATAGGAGAG+TGG | 0.587840 | 4_4:-15317141 | None:intergenic |
| AGCTCATCCCTTACCAAGGG+TGG | 0.589335 | 4_4:+15322233 | Msa0671600:three_prime_UTR |
| CCTATTTGTTCACAACGATG+TGG | 0.590990 | 4_4:-15319610 | None:intergenic |
| TTGGCTTACATAGAGACTAC+AGG | 0.593031 | 4_4:+15319850 | Msa0671600:CDS |
| TATGTGGCCACCCTTGGTAA+GGG | 0.594953 | 4_4:-15322240 | None:intergenic |
| ACCTAAAGAACAAAGATCCA+AGG | 0.596150 | 4_4:+15319765 | Msa0671600:CDS |
| AATGCTGTCATGCTTGAAGG+AGG | 0.601186 | 4_4:-15321456 | None:intergenic |
| GAATCAAGGACTGGTTGCAG+TGG | 0.604901 | 4_4:+15318337 | Msa0671600:CDS |
| ATTGAAACAAACTAATGTTG+AGG | 0.605351 | 4_4:+15318406 | Msa0671600:CDS |
| GCATTGTTGATAAGAATGGA+TGG | 0.609229 | 4_4:+15317153 | Msa0671600:exon |
| AATTGATCAGCACCAAGTGT+TGG | 0.613285 | 4_4:-15319730 | None:intergenic |
| CGTACCTGAGGCCATTTGCA+TGG | 0.614860 | 4_4:-15320107 | None:intergenic |
| TGTTGAGCAAGGTTCTACAA+TGG | 0.616288 | 4_4:+15321407 | Msa0671600:CDS |
| CATTCTTATCAACAATGCAT+AGG | 0.617280 | 4_4:-15317148 | None:intergenic |
| GTTGGAATATAATGCAAGTG+AGG | 0.617388 | 4_4:-15318517 | None:intergenic |
| ATTCCTAAAAGCATATATTG+TGG | 0.634005 | 4_4:-15321714 | None:intergenic |
| TGTGACAGTGAATCAAGGAC+TGG | 0.636123 | 4_4:+15318328 | Msa0671600:intron |
| ATGCTGTCATGCTTGAAGGA+GGG | 0.636585 | 4_4:-15321455 | None:intergenic |
| TGATTTGATAGAATGACAAG+TGG | 0.637516 | 4_4:+15322067 | Msa0671600:three_prime_UTR |
| GGGTAGCTCATCCCTTACCA+AGG | 0.645106 | 4_4:+15322229 | Msa0671600:three_prime_UTR |
| CTACCACGACGGTATTCAAG+GGG | 0.649839 | 4_4:+15320059 | Msa0671600:CDS |
| ACCGACATAGCAACCAAGTG+CGG | 0.651651 | 4_4:-15321835 | None:intergenic |
| GGTAGCTCATCCCTTACCAA+GGG | 0.651702 | 4_4:+15322230 | Msa0671600:three_prime_UTR |
| GTATGTGCCAAAAGATACAA+GGG | 0.653636 | 4_4:+15322005 | Msa0671600:CDS |
| TCAAGTGGTCAAGGACAACA+TGG | 0.658509 | 4_4:+15321891 | Msa0671600:CDS |
| CAGTCTAACACAAAGCGAAG+CGG | 0.661953 | 4_4:+15321302 | Msa0671600:CDS |
| TGGTGCTGATCAATTTGATG+AGG | 0.664130 | 4_4:+15319738 | Msa0671600:CDS |
| GGGGAAGATCTCTACCACGA+CGG | 0.678245 | 4_4:+15320048 | Msa0671600:CDS |
| ATATTGTTGTTGATATTGTG+GGG | 0.678260 | 4_4:-15322385 | None:intergenic |
| CAATTGTATGAAAACACTAG+AGG | 0.679956 | 4_4:-15321373 | None:intergenic |
| CATCCCCTTGAATACCGTCG+TGG | 0.715336 | 4_4:-15320062 | None:intergenic |
| ATAGATACCTAACAACAATG+TGG | 0.757923 | 4_4:-15317413 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTAATTGATTTGTA+AGG | + | chr4_4:15317288-15317307 | Msa0671600:intron | 10.0% |
| !! | TAAATCATAAATATAAAGAA+GGG | - | chr4_4:15317446-15317465 | None:intergenic | 10.0% |
| !! | ATAAATCATAAATATAAAGA+AGG | - | chr4_4:15317447-15317466 | None:intergenic | 10.0% |
| !! | AACAAAGTCTTTATATAAAT+AGG | - | chr4_4:15317721-15317740 | None:intergenic | 15.0% |
| !!! | AATTTCATTTTCTTCAAAAA+GGG | - | chr4_4:15320012-15320031 | None:intergenic | 15.0% |
| !!! | AAATTTCATTTTCTTCAAAA+AGG | - | chr4_4:15320013-15320032 | None:intergenic | 15.0% |
| !! | AAATTTCAAATACAATCAAT+TGG | + | chr4_4:15320027-15320046 | Msa0671600:CDS | 15.0% |
| !! | AATTTCAAATACAATCAATT+GGG | + | chr4_4:15320028-15320047 | Msa0671600:CDS | 15.0% |
| !! | ATTAAATTAAAACAAGTACA+AGG | + | chr4_4:15320189-15320208 | Msa0671600:intron | 15.0% |
| !! | TTAAATTAAAACAAGTACAA+GGG | + | chr4_4:15320190-15320209 | Msa0671600:intron | 15.0% |
| !! | AAATCAACTCTATAAATATA+GGG | - | chr4_4:15321001-15321020 | None:intergenic | 15.0% |
| !! | CAAAATGAATAAAGAAAATT+TGG | - | chr4_4:15321179-15321198 | None:intergenic | 15.0% |
| !!! | TTTCTTTATTCATTTTGTTT+CGG | + | chr4_4:15321182-15321201 | Msa0671600:intron | 15.0% |
| !!! | TTATTATATATCTTCCGTTT+TGG | + | chr4_4:15317548-15317567 | Msa0671600:intron | 20.0% |
| !! | TTAGCTTATGCAAATAAATA+AGG | - | chr4_4:15317886-15317905 | None:intergenic | 20.0% |
| !! | AAAAAATAAGTCAATCCAAA+TGG | + | chr4_4:15317904-15317923 | Msa0671600:intron | 20.0% |
| !! | AAAAATAAGTCAATCCAAAT+GGG | + | chr4_4:15317905-15317924 | Msa0671600:intron | 20.0% |
| !! | TATATAAGCTACTTGAATTA+TGG | - | chr4_4:15317931-15317950 | None:intergenic | 20.0% |
| !!! | TGTTTTCAATTAAGATTACA+AGG | - | chr4_4:15317993-15318012 | None:intergenic | 20.0% |
| !!! | GTTATTTTAGATTACTCTTT+AGG | + | chr4_4:15318720-15318739 | Msa0671600:intron | 20.0% |
| !!! | TCGTATTTTAATTAGATAAC+AGG | - | chr4_4:15318788-15318807 | None:intergenic | 20.0% |
| !! | TCTAATTAAAATACGATAAG+TGG | + | chr4_4:15318792-15318811 | Msa0671600:intron | 20.0% |
| !!! | TGAATTTTATAACAAAGGAT+AGG | - | chr4_4:15319025-15319044 | None:intergenic | 20.0% |
| !!! | TGCAATGAATTTTATAACAA+AGG | - | chr4_4:15319030-15319049 | None:intergenic | 20.0% |
| !! | ATTAAGTTATTGATCCTATT+AGG | - | chr4_4:15319055-15319074 | None:intergenic | 20.0% |
| !! | ATAGGATCAATAACTTAATT+AGG | + | chr4_4:15319056-15319075 | Msa0671600:intron | 20.0% |
| !!! | TGTTAATGAATAATACCTTT+TGG | + | chr4_4:15319086-15319105 | Msa0671600:intron | 20.0% |
| !! | TATATTGATAGGTAAAAAAG+TGG | - | chr4_4:15319670-15319689 | None:intergenic | 20.0% |
| !! | ATTTCAAATACAATCAATTG+GGG | + | chr4_4:15320029-15320048 | Msa0671600:CDS | 20.0% |
| !! | TAAATTAAAACAAGTACAAG+GGG | + | chr4_4:15320191-15320210 | Msa0671600:intron | 20.0% |
| !!! | TTTTTGTAGAGAAAAAGTTT+AGG | - | chr4_4:15320391-15320410 | None:intergenic | 20.0% |
| !!! | TTGAAATTGGTTTACTATTA+CGG | - | chr4_4:15320520-15320539 | None:intergenic | 20.0% |
| !! | AAAATTGCTTTATATTCCTA+AGG | + | chr4_4:15320610-15320629 | Msa0671600:intron | 20.0% |
| !! | CAAATCAACTCTATAAATAT+AGG | - | chr4_4:15321002-15321021 | None:intergenic | 20.0% |
| !!! | GACTACTTTTTTTTAGTTAA+AGG | + | chr4_4:15321104-15321123 | Msa0671600:intron | 20.0% |
| !!! | AATTCCATTTGTATGATTTT+TGG | - | chr4_4:15321278-15321297 | None:intergenic | 20.0% |
| !! | TCATCACTTTAATATACAAT+GGG | - | chr4_4:15321533-15321552 | None:intergenic | 20.0% |
| !! | TTCATCACTTTAATATACAA+TGG | - | chr4_4:15321534-15321553 | None:intergenic | 20.0% |
| !! | GTAAATAAAATTACATCAAG+TGG | + | chr4_4:15321876-15321895 | Msa0671600:CDS | 20.0% |
| !!! | AATATTGTTGTTGATATTGT+GGG | - | chr4_4:15322389-15322408 | None:intergenic | 20.0% |
| !!! | AAATATTGTTGTTGATATTG+TGG | - | chr4_4:15322390-15322409 | None:intergenic | 20.0% |
| !!! | CTTTCTTTCTTTGTTTTGAA+AGG | - | chr4_4:15317058-15317077 | None:intergenic | 25.0% |
| ! | CATATATACGCTAATTTATG+CGG | + | chr4_4:15317226-15317245 | Msa0671600:intron | 25.0% |
| ! | ATATATACGCTAATTTATGC+GGG | + | chr4_4:15317227-15317246 | Msa0671600:intron | 25.0% |
| !! | TAAATATAAAGAAGGGTATG+TGG | - | chr4_4:15317439-15317458 | None:intergenic | 25.0% |
| !!! | TATCGATGTTTTTTCGATTA+CGG | + | chr4_4:15317464-15317483 | Msa0671600:intron | 25.0% |
| !!! | TATAAAGACTTTGTTTTGCA+AGG | + | chr4_4:15317726-15317745 | Msa0671600:intron | 25.0% |
| ! | CATTATTCATAAGTTTGTCA+AGG | - | chr4_4:15317856-15317875 | None:intergenic | 25.0% |
| ! | ACTTATAAGCTAACTTATAG+CGG | - | chr4_4:15318094-15318113 | None:intergenic | 25.0% |
| !! | ATTAGCTATTCTAGAAAGTT+TGG | - | chr4_4:15318143-15318162 | None:intergenic | 25.0% |
| !! | TCATAGATATAGGTATTGTT+TGG | - | chr4_4:15318261-15318280 | None:intergenic | 25.0% |
| ! | ATCGATATAGTCATAGATAT+AGG | - | chr4_4:15318271-15318290 | None:intergenic | 25.0% |
| ! | ATTGAAACAAACTAATGTTG+AGG | + | chr4_4:15318406-15318425 | Msa0671600:CDS | 25.0% |
| !! | ACCTATTTCTTCTCTTTAAT+TGG | + | chr4_4:15318461-15318480 | Msa0671600:CDS | 25.0% |
| ! | TCCAATTAAAGAGAAGAAAT+AGG | - | chr4_4:15318465-15318484 | None:intergenic | 25.0% |
| ! | ATCATAGTAAGTAATCAACA+TGG | + | chr4_4:15318548-15318567 | Msa0671600:intron | 25.0% |
| ! | AAATTCATTGCAAACCTAAT+AGG | + | chr4_4:15319038-15319057 | Msa0671600:intron | 25.0% |
| !! | ATGGGTTAATCAAAATTTCA+AGG | + | chr4_4:15319151-15319170 | Msa0671600:intron | 25.0% |
| !!! | ATTTCAAGGTATTGAGTATA+CGG | + | chr4_4:15319165-15319184 | Msa0671600:intron | 25.0% |
| ! | GAAACTCATATTGAGTATAT+GGG | + | chr4_4:15319396-15319415 | Msa0671600:intron | 25.0% |
| ! | AAATGACAGAATTATAAGAG+AGG | - | chr4_4:15319425-15319444 | None:intergenic | 25.0% |
| !! | CTTTGCTTTCATTTTATGTA+GGG | + | chr4_4:15319544-15319563 | Msa0671600:intron | 25.0% |
| !! | TTTGCTTTCATTTTATGTAG+GGG | + | chr4_4:15319545-15319564 | Msa0671600:intron | 25.0% |
| ! | GAGCTATTAGATATATTGAT+AGG | - | chr4_4:15319681-15319700 | None:intergenic | 25.0% |
| ! | TCAATATATCTAATAGCTCT+AGG | + | chr4_4:15319682-15319701 | Msa0671600:CDS | 25.0% |
| ! | ATAAAAGTAGCCATAAATTG+AGG | - | chr4_4:15319791-15319810 | None:intergenic | 25.0% |
| !!! | AATTTATGGCTACTTTTATG+TGG | + | chr4_4:15319792-15319811 | Msa0671600:CDS | 25.0% |
| ! | AAAAGTTCAAGAAAACTTCA+AGG | + | chr4_4:15320470-15320489 | Msa0671600:intron | 25.0% |
| !!! | CATCAAAGCTTTTTTGAAAT+TGG | - | chr4_4:15320533-15320552 | None:intergenic | 25.0% |
| !!! | TGAGTTCTTTGAGTATTTTT+TGG | + | chr4_4:15321685-15321704 | Msa0671600:CDS | 25.0% |
| !! | ATACCACAATATATGCTTTT+AGG | + | chr4_4:15321711-15321730 | Msa0671600:CDS | 25.0% |
| !! | ATTCCTAAAAGCATATATTG+TGG | - | chr4_4:15321717-15321736 | None:intergenic | 25.0% |
| ! | AAATGACCATCATTTAGATT+AGG | - | chr4_4:15321927-15321946 | None:intergenic | 25.0% |
| ! | TAAATGATGGTCATTTAGAT+AGG | + | chr4_4:15321931-15321950 | Msa0671600:CDS | 25.0% |
| ! | TTTATAAGAAGACATGTCAA+TGG | + | chr4_4:15322208-15322227 | Msa0671600:three_prime_UTR | 25.0% |
| ! | TTATAAGAAGACATGTCAAT+GGG | + | chr4_4:15322209-15322228 | Msa0671600:three_prime_UTR | 25.0% |
| ! | CTGAAAACTAGTTAAATATG+TGG | - | chr4_4:15322259-15322278 | None:intergenic | 25.0% |
| !! | ATATTGTTGTTGATATTGTG+GGG | - | chr4_4:15322388-15322407 | None:intergenic | 25.0% |
| !!! | TCTTTGTTTTGAAAGGATAG+AGG | - | chr4_4:15317051-15317070 | None:intergenic | 30.0% |
| ! | AGGTAGGTTTTACATATACA+CGG | - | chr4_4:15317112-15317131 | None:intergenic | 30.0% |
| CATTCTTATCAACAATGCAT+AGG | - | chr4_4:15317151-15317170 | None:intergenic | 30.0% | |
| ! | CTATGCATTGTTGATAAGAA+TGG | + | chr4_4:15317149-15317168 | Msa0671600:exon | 30.0% |
| GTATATATGGTGAATCGAAT+TGG | - | chr4_4:15317215-15317234 | None:intergenic | 30.0% | |
| CGCATAAATTAGCGTATATA+TGG | - | chr4_4:15317228-15317247 | None:intergenic | 30.0% | |
| ATCAATTCCTGTACAAAAGA+TGG | + | chr4_4:15317331-15317350 | Msa0671600:CDS | 30.0% | |
| TCAATTCCTGTACAAAAGAT+GGG | + | chr4_4:15317332-15317351 | Msa0671600:CDS | 30.0% | |
| TGAAAAATAGTTCAGGTAGA+TGG | + | chr4_4:15317383-15317402 | Msa0671600:CDS | 30.0% | |
| ATAGATACCTAACAACAATG+TGG | - | chr4_4:15317416-15317435 | None:intergenic | 30.0% | |
| !!! | ATCGATGTTTTTTCGATTAC+GGG | + | chr4_4:15317465-15317484 | Msa0671600:intron | 30.0% |
| GTTTCATCTATCTACCAAAA+CGG | - | chr4_4:15317565-15317584 | None:intergenic | 30.0% | |
| GCAAAAATGTCGAAATTGTT+AGG | - | chr4_4:15317667-15317686 | None:intergenic | 30.0% | |
| GTTGAACTAGCGTATAAATA+AGG | - | chr4_4:15318028-15318047 | None:intergenic | 30.0% | |
| CTCTGTTTGGTAAAAAACAA+CGG | - | chr4_4:15318120-15318139 | None:intergenic | 30.0% | |
| TAAATTGTGACAGTGAATCA+AGG | + | chr4_4:15318323-15318342 | Msa0671600:intron | 30.0% | |
| ! | AAACACTTTTAGCATATGGA+TGG | + | chr4_4:15318433-15318452 | Msa0671600:CDS | 30.0% |
| ! | AACACTTTTAGCATATGGAT+GGG | + | chr4_4:15318434-15318453 | Msa0671600:CDS | 30.0% |
| TTACTATGATGAACACAAGT+TGG | - | chr4_4:15318538-15318557 | None:intergenic | 30.0% | |
| TCTTTCGTTAACAGAAGTTT+AGG | + | chr4_4:15318646-15318665 | Msa0671600:intron | 30.0% | |
| ACTTTGATTAGAAATGTCAG+TGG | + | chr4_4:15318837-15318856 | Msa0671600:intron | 30.0% | |
| TGTTGTTGTGTTTGGTATTT+AGG | + | chr4_4:15319109-15319128 | Msa0671600:intron | 30.0% | |
| GTTGTTGTGTTTGGTATTTA+GGG | + | chr4_4:15319110-15319129 | Msa0671600:intron | 30.0% | |
| !! | TTTCAAGGTATTGAGTATAC+GGG | + | chr4_4:15319166-15319185 | Msa0671600:intron | 30.0% |
| AAAAGAGGATAAAGTGATGT+AGG | - | chr4_4:15319256-15319275 | None:intergenic | 30.0% | |
| ATCATAACATGCTAACGATT+AGG | + | chr4_4:15319340-15319359 | Msa0671600:intron | 30.0% | |
| CGAAACTCATATTGAGTATA+TGG | + | chr4_4:15319395-15319414 | Msa0671600:intron | 30.0% | |
| TCATGAAATTAAAGTGTGAG+TGG | - | chr4_4:15319476-15319495 | None:intergenic | 30.0% | |
| GCAAAGGAAAATAGAACTTT+AGG | - | chr4_4:15319530-15319549 | None:intergenic | 30.0% | |
| CCTACATAAAATGAAAGCAA+AGG | - | chr4_4:15319546-15319565 | None:intergenic | 30.0% | |
| ! | CCTTTGCTTTCATTTTATGT+AGG | + | chr4_4:15319543-15319562 | Msa0671600:intron | 30.0% |
| !! | TTTTATGTGGCATTGAACTT+GGG | + | chr4_4:15319805-15319824 | Msa0671600:CDS | 30.0% |
| !!! | TCATTTCTTGTTTTGTTGAG+TGG | + | chr4_4:15319919-15319938 | Msa0671600:CDS | 30.0% |
| ! | TACAGACACTATAAGACTTT+TGG | + | chr4_4:15319952-15319971 | Msa0671600:CDS | 30.0% |
| GTTGTGAAAACTTAGAGAAA+GGG | - | chr4_4:15319981-15320000 | None:intergenic | 30.0% | |
| AGTTGTGAAAACTTAGAGAA+AGG | - | chr4_4:15319982-15320001 | None:intergenic | 30.0% | |
| TTGTAGAGAAAAAGTTTAGG+CGG | - | chr4_4:15320388-15320407 | None:intergenic | 30.0% | |
| CTATACTTGATCAAAACACT+AGG | - | chr4_4:15320780-15320799 | None:intergenic | 30.0% | |
| AACTCATTCATAGTCAATGT+AGG | - | chr4_4:15320860-15320879 | None:intergenic | 30.0% | |
| AATGAGTTCACTGTTAACAA+AGG | + | chr4_4:15320872-15320891 | Msa0671600:intron | 30.0% | |
| ATCCAAAATCTTAGAGCTTT+GGG | - | chr4_4:15320914-15320933 | None:intergenic | 30.0% | |
| CTGTTATATAACAGTGAACT+CGG | - | chr4_4:15320954-15320973 | None:intergenic | 30.0% | |
| AAGGCCAAAAATCATACAAA+TGG | + | chr4_4:15321271-15321290 | Msa0671600:CDS | 30.0% | |
| !!! | TTTTGAGAGTGTTACCAATA+TGG | + | chr4_4:15321334-15321353 | Msa0671600:CDS | 30.0% |
| AAGATTGTGCAAAACCATAT+TGG | - | chr4_4:15321351-15321370 | None:intergenic | 30.0% | |
| CAATTGTATGAAAACACTAG+AGG | - | chr4_4:15321376-15321395 | None:intergenic | 30.0% | |
| GATGAAAATACTTTGTAGCT+CGG | - | chr4_4:15321577-15321596 | None:intergenic | 30.0% | |
| !! | GAGCTACAAAGTATTTTCAT+CGG | + | chr4_4:15321576-15321595 | Msa0671600:CDS | 30.0% |
| ! | ATCATAACATTGATTGTTGC+TGG | + | chr4_4:15321612-15321631 | Msa0671600:CDS | 30.0% |
| AAAATTACATCAAGTGGTCA+AGG | + | chr4_4:15321882-15321901 | Msa0671600:CDS | 30.0% | |
| GTTTCACCTAATCTAAATGA+TGG | + | chr4_4:15321918-15321937 | Msa0671600:CDS | 30.0% | |
| ! | TTATATGCCCTTGTATCTTT+TGG | - | chr4_4:15322015-15322034 | None:intergenic | 30.0% |
| ! | AAGATACAAGGGCATATAAT+TGG | + | chr4_4:15322016-15322035 | Msa0671600:exon | 30.0% |
| AATTGGAGAAAAGAGAAGAT+AGG | + | chr4_4:15322033-15322052 | Msa0671600:exon | 30.0% | |
| TGATTTGATAGAATGACAAG+TGG | + | chr4_4:15322067-15322086 | Msa0671600:three_prime_UTR | 30.0% | |
| !! | ATTTTTACAGAGCATCAAGA+AGG | + | chr4_4:15322110-15322129 | Msa0671600:three_prime_UTR | 30.0% |
| ATGTCTACAATCAGAAACTA+TGG | - | chr4_4:15322153-15322172 | None:intergenic | 30.0% | |
| !! | AAATCTACTGGTTCGTATGT+TGG | - | chr4_4:15317013-15317032 | None:intergenic | 35.0% |
| ACATACGAACCAGTAGATTT+AGG | + | chr4_4:15317013-15317032 | Msa0671600:five_prime_UTR | 35.0% | |
| CATACGAACCAGTAGATTTA+GGG | + | chr4_4:15317014-15317033 | Msa0671600:five_prime_UTR | 35.0% | |
| AGAGTGGTTTATAAGAAGGT+AGG | - | chr4_4:15317128-15317147 | None:intergenic | 35.0% | |
| TAGGAGAGTGGTTTATAAGA+AGG | - | chr4_4:15317132-15317151 | None:intergenic | 35.0% | |
| ! | GCATTGTTGATAAGAATGGA+TGG | + | chr4_4:15317153-15317172 | Msa0671600:exon | 35.0% |
| TTGTAAGGTTGTTGAAGAAG+AGG | + | chr4_4:15317303-15317322 | Msa0671600:intron | 35.0% | |
| TGTAAGGTTGTTGAAGAAGA+GGG | + | chr4_4:15317304-15317323 | Msa0671600:intron | 35.0% | |
| !! | GATGGGTCAGTTGATTTTTA+TGG | + | chr4_4:15317349-15317368 | Msa0671600:CDS | 35.0% |
| !! | CCTGAACTATTTTTCAAAGC+TGG | - | chr4_4:15317379-15317398 | None:intergenic | 35.0% |
| !! | CCAGCTTTGAAAAATAGTTC+AGG | + | chr4_4:15317376-15317395 | Msa0671600:CDS | 35.0% |
| TTAAAACTCACACACACAAG+TGG | + | chr4_4:15317604-15317623 | Msa0671600:intron | 35.0% | |
| ! | ACATTTTTGCCAATTGAGCT+AGG | + | chr4_4:15317677-15317696 | Msa0671600:intron | 35.0% |
| TACTTGAATTATGGCCCATT+TGG | - | chr4_4:15317922-15317941 | None:intergenic | 35.0% | |
| ! | CAGCAAACACTTTTAGCATA+TGG | + | chr4_4:15318429-15318448 | Msa0671600:CDS | 35.0% |
| TTTCTCAGTGACTCATATCT+AGG | + | chr4_4:15318488-15318507 | Msa0671600:CDS | 35.0% | |
| GTTGGAATATAATGCAAGTG+AGG | - | chr4_4:15318520-15318539 | None:intergenic | 35.0% | |
| TTCGTTAACAGAAGTTTAGG+AGG | + | chr4_4:15318649-15318668 | Msa0671600:intron | 35.0% | |
| TATCTAAACTTGTGATGTGC+AGG | - | chr4_4:15318687-15318706 | None:intergenic | 35.0% | |
| ! | TAGGACAAATTTTATGCCAG+TGG | + | chr4_4:15318739-15318758 | Msa0671600:intron | 35.0% |
| TATTCCAGAGAGTTGAGTAA+GGG | - | chr4_4:15318929-15318948 | None:intergenic | 35.0% | |
| ATATTCCAGAGAGTTGAGTA+AGG | - | chr4_4:15318930-15318949 | None:intergenic | 35.0% | |
| !! | TTCAAGGTATTGAGTATACG+GGG | + | chr4_4:15319167-15319186 | Msa0671600:intron | 35.0% |
| !! | TAGTCTTGATTCGGTTTGAT+GGG | - | chr4_4:15319283-15319302 | None:intergenic | 35.0% |
| !! | ATAGTCTTGATTCGGTTTGA+TGG | - | chr4_4:15319284-15319303 | None:intergenic | 35.0% |
| ! | GTGGTATGATAGTCTTGATT+CGG | - | chr4_4:15319292-15319311 | None:intergenic | 35.0% |
| TCGTTAGCATGTTATGATTC+TGG | - | chr4_4:15319338-15319357 | None:intergenic | 35.0% | |
| TGCTAACGATTAGGACAATT+AGG | + | chr4_4:15319349-15319368 | Msa0671600:intron | 35.0% | |
| TATGAGTTTCGATAGAGATG+TGG | - | chr4_4:15319386-15319405 | None:intergenic | 35.0% | |
| ! | TCATTTTATGTAGGGGTTGA+TGG | + | chr4_4:15319552-15319571 | Msa0671600:intron | 35.0% |
| !! | TATCTAATAGCTCTAGGAAG+TGG | + | chr4_4:15319688-15319707 | Msa0671600:CDS | 35.0% |
| ACCTAAAGAACAAAGATCCA+AGG | + | chr4_4:15319765-15319784 | Msa0671600:CDS | 35.0% | |
| !! | CTTTTATGTGGCATTGAACT+TGG | + | chr4_4:15319804-15319823 | Msa0671600:CDS | 35.0% |
| ATTGGTTGCTGAGACTATAT+TGG | + | chr4_4:15319831-15319850 | Msa0671600:CDS | 35.0% | |
| AGAAGAATACACCATGCAAA+TGG | + | chr4_4:15320096-15320115 | Msa0671600:CDS | 35.0% | |
| AAGTTCTCACATTGGCATAT+GGG | - | chr4_4:15320280-15320299 | None:intergenic | 35.0% | |
| ! | TCAATGCTATTTGAGCATTG+AGG | + | chr4_4:15320326-15320345 | Msa0671600:intron | 35.0% |
| TGTAGAGAAAAAGTTTAGGC+GGG | - | chr4_4:15320387-15320406 | None:intergenic | 35.0% | |
| ! | TACGGTTAATAGCTTGTATG+AGG | - | chr4_4:15320502-15320521 | None:intergenic | 35.0% |
| ! | TATTCCTAAGGCCTTGATTT+TGG | + | chr4_4:15320622-15320641 | Msa0671600:intron | 35.0% |
| TCAAATCTCCACCAAAATCA+AGG | - | chr4_4:15320636-15320655 | None:intergenic | 35.0% | |
| ATCAAAATCACCAAAAGACC+TGG | - | chr4_4:15320662-15320681 | None:intergenic | 35.0% | |
| TGATGTGATATTCACACTTG+AGG | + | chr4_4:15320800-15320819 | Msa0671600:intron | 35.0% | |
| GATGTGATATTCACACTTGA+GGG | + | chr4_4:15320801-15320820 | Msa0671600:intron | 35.0% | |
| !! | TCTTAGAGCTTTGGGAATAT+GGG | - | chr4_4:15320906-15320925 | None:intergenic | 35.0% |
| !! | ATCTTAGAGCTTTGGGAATA+TGG | - | chr4_4:15320907-15320926 | None:intergenic | 35.0% |
| !!! | TTCCCAAAGCTCTAAGATTT+TGG | + | chr4_4:15320909-15320928 | Msa0671600:intron | 35.0% |
| CATCCAAAATCTTAGAGCTT+TGG | - | chr4_4:15320915-15320934 | None:intergenic | 35.0% | |
| TTATATAACAGTGAACTCGG+CGG | - | chr4_4:15320951-15320970 | None:intergenic | 35.0% | |
| TATGGCTAACAAGAATGGAA+TGG | - | chr4_4:15321054-15321073 | None:intergenic | 35.0% | |
| GATTGTATGGCTAACAAGAA+TGG | - | chr4_4:15321059-15321078 | None:intergenic | 35.0% | |
| ACAACTTGCAACAGATTGTA+TGG | - | chr4_4:15321072-15321091 | None:intergenic | 35.0% | |
| AGTTAAAGGATACAAACACG+AGG | + | chr4_4:15321118-15321137 | Msa0671600:intron | 35.0% | |
| !! | ATTTTGTTTCGGTGACATAC+AGG | + | chr4_4:15321193-15321212 | Msa0671600:intron | 35.0% |
| !!! | TACAGGTTTTTTGATAGAGC+TGG | + | chr4_4:15321210-15321229 | Msa0671600:intron | 35.0% |
| ACTGAGATGTTACTAGGTAA+AGG | + | chr4_4:15321252-15321271 | Msa0671600:CDS | 35.0% | |
| ! | CTTTCTCTATTTGTTGAGCA+AGG | + | chr4_4:15321396-15321415 | Msa0671600:CDS | 35.0% |
| AAAATACTTTGTAGCTCGGT+AGG | - | chr4_4:15321573-15321592 | None:intergenic | 35.0% | |
| ! | TTAAGTTTTGCCAGCAATGA+TGG | + | chr4_4:15321654-15321673 | Msa0671600:CDS | 35.0% |
| TGTATGTGCCAAAAGATACA+AGG | + | chr4_4:15322004-15322023 | Msa0671600:CDS | 35.0% | |
| GTATGTGCCAAAAGATACAA+GGG | + | chr4_4:15322005-15322024 | Msa0671600:CDS | 35.0% | |
| TGGAGAATGAGATTGCAATA+GGG | - | chr4_4:15322351-15322370 | None:intergenic | 35.0% | |
| TTGGAGAATGAGATTGCAAT+AGG | - | chr4_4:15322352-15322371 | None:intergenic | 35.0% | |
| !! | TACTGGTTCGTATGTTGGTT+TGG | - | chr4_4:15317008-15317027 | None:intergenic | 40.0% |
| ATCAACAATGCATAGGAGAG+TGG | - | chr4_4:15317144-15317163 | None:intergenic | 40.0% | |
| CGAACAAAATTTAGCGTCAC+AGG | + | chr4_4:15317179-15317198 | Msa0671600:CDS | 40.0% | |
| GTAAGGTTGTTGAAGAAGAG+GGG | + | chr4_4:15317305-15317324 | Msa0671600:intron | 40.0% | |
| ! | AACTGACCCATCTTTTGTAC+AGG | - | chr4_4:15317341-15317360 | None:intergenic | 40.0% |
| !! | AGAAGTGCCACATTGTTGTT+AGG | + | chr4_4:15317406-15317425 | Msa0671600:CDS | 40.0% |
| ! | TTTTCGATTACGGGTCTGTT+TGG | + | chr4_4:15317474-15317493 | Msa0671600:intron | 40.0% |
| TTCGAGCACTTAAGAGATTG+CGG | + | chr4_4:15317506-15317525 | Msa0671600:intron | 40.0% | |
| TTAAGAGATTGCGGGTTTGT+TGG | + | chr4_4:15317515-15317534 | Msa0671600:intron | 40.0% | |
| ! | TAAGAGATTGCGGGTTTGTT+GGG | + | chr4_4:15317516-15317535 | Msa0671600:intron | 40.0% |
| TGAACTCCTGTCACAATGTT+TGG | + | chr4_4:15317641-15317660 | Msa0671600:intron | 40.0% | |
| !! | CTAGAAAGTTTGGCTCTGTT+TGG | - | chr4_4:15318133-15318152 | None:intergenic | 40.0% |
| AACTTGTGATGTGCAGGAAT+GGG | - | chr4_4:15318681-15318700 | None:intergenic | 40.0% | |
| AAACTTGTGATGTGCAGGAA+TGG | - | chr4_4:15318682-15318701 | None:intergenic | 40.0% | |
| TTAGTACTCCACTACTCCTT+TGG | + | chr4_4:15318900-15318919 | Msa0671600:intron | 40.0% | |
| CCAAACACAACAACACCAAA+AGG | - | chr4_4:15319104-15319123 | None:intergenic | 40.0% | |
| !!! | CCTTTTGGTGTTGTTGTGTT+TGG | + | chr4_4:15319101-15319120 | Msa0671600:intron | 40.0% |
| TTGGTATTTAGGGAGAACAC+TGG | + | chr4_4:15319120-15319139 | Msa0671600:intron | 40.0% | |
| TGGTATTTAGGGAGAACACT+GGG | + | chr4_4:15319121-15319140 | Msa0671600:intron | 40.0% | |
| TAAAGTGATGTAGGAGACTC+AGG | - | chr4_4:15319247-15319266 | None:intergenic | 40.0% | |
| TCGATAGAGATGTGGTATCA+AGG | - | chr4_4:15319378-15319397 | None:intergenic | 40.0% | |
| AGTCCATTCCTAGTTGTTGT+AGG | + | chr4_4:15319445-15319464 | Msa0671600:intron | 40.0% | |
| AGTCCTACAACAACTAGGAA+TGG | - | chr4_4:15319451-15319470 | None:intergenic | 40.0% | |
| ! | TGGTTAGTCCTACAACAACT+AGG | - | chr4_4:15319456-15319475 | None:intergenic | 40.0% |
| CCTATTTGTTCACAACGATG+TGG | - | chr4_4:15319613-15319632 | None:intergenic | 40.0% | |
| CCACATCGTTGTGAACAAAT+AGG | + | chr4_4:15319610-15319629 | Msa0671600:CDS | 40.0% | |
| AATTGATCAGCACCAAGTGT+TGG | - | chr4_4:15319733-15319752 | None:intergenic | 40.0% | |
| !! | TGGTGCTGATCAATTTGATG+AGG | + | chr4_4:15319738-15319757 | Msa0671600:CDS | 40.0% |
| GCCTTGGATCTTTGTTCTTT+AGG | - | chr4_4:15319769-15319788 | None:intergenic | 40.0% | |
| AGATCCAAGGCCTCAATTTA+TGG | + | chr4_4:15319778-15319797 | Msa0671600:CDS | 40.0% | |
| TTGGCTTACATAGAGACTAC+AGG | + | chr4_4:15319850-15319869 | Msa0671600:CDS | 40.0% | |
| ACATAGAGACTACAGGACAT+TGG | + | chr4_4:15319857-15319876 | Msa0671600:CDS | 40.0% | |
| CATAGAGACTACAGGACATT+GGG | + | chr4_4:15319858-15319877 | Msa0671600:CDS | 40.0% | |
| GAAACTAGACCAGTCTACAT+TGG | - | chr4_4:15320217-15320236 | None:intergenic | 40.0% | |
| !! | TGTAGACTGGTCTAGTTTCT+AGG | + | chr4_4:15320218-15320237 | Msa0671600:intron | 40.0% |
| !! | GTAGACTGGTCTAGTTTCTA+GGG | + | chr4_4:15320219-15320238 | Msa0671600:intron | 40.0% |
| GATTCAACTCAGATCTCACA+AGG | + | chr4_4:15320241-15320260 | Msa0671600:intron | 40.0% | |
| GAAGTTCTCACATTGGCATA+TGG | - | chr4_4:15320281-15320300 | None:intergenic | 40.0% | |
| TGCCAATGTGAGAACTTCAT+TGG | + | chr4_4:15320283-15320302 | Msa0671600:intron | 40.0% | |
| AGAAAAAGTTTAGGCGGGAT+GGG | - | chr4_4:15320382-15320401 | None:intergenic | 40.0% | |
| ACCCACTTGTTTAGGAGTTT+GGG | - | chr4_4:15320714-15320733 | None:intergenic | 40.0% | |
| TACCCACTTGTTTAGGAGTT+TGG | - | chr4_4:15320715-15320734 | None:intergenic | 40.0% | |
| GCTATGATACCCACTTGTTT+AGG | - | chr4_4:15320722-15320741 | None:intergenic | 40.0% | |
| !! | ATCATAGCCTTGTTTCGACT+TGG | + | chr4_4:15320734-15320753 | Msa0671600:intron | 40.0% |
| GTTCACTGTTAACAAAGGTG+AGG | + | chr4_4:15320877-15320896 | Msa0671600:intron | 40.0% | |
| TATATAACAGTGAACTCGGC+GGG | - | chr4_4:15320950-15320969 | None:intergenic | 40.0% | |
| !! | AGCTGGTATTGTTTCTGATG+AGG | + | chr4_4:15321227-15321246 | Msa0671600:CDS | 40.0% |
| TGTTGAGCAAGGTTCTACAA+TGG | + | chr4_4:15321407-15321426 | Msa0671600:CDS | 40.0% | |
| TCAAATGCTGTCATGCTTGA+AGG | - | chr4_4:15321462-15321481 | None:intergenic | 40.0% | |
| CATCTCTTTACCATCATTGC+TGG | - | chr4_4:15321667-15321686 | None:intergenic | 40.0% | |
| ! | TCTATGTTTTCATCCGCACT+TGG | + | chr4_4:15321822-15321841 | Msa0671600:CDS | 40.0% |
| ! | CGGTAACATTTTTCTGACTG+TGG | + | chr4_4:15321854-15321873 | Msa0671600:CDS | 40.0% |
| GATAGAATGACAAGTGGAGT+TGG | + | chr4_4:15322073-15322092 | Msa0671600:three_prime_UTR | 40.0% | |
| TCGTGTTTCTCTCAGATCAT+TGG | + | chr4_4:15322318-15322337 | Msa0671600:three_prime_UTR | 40.0% | |
| GTGGGGAAAAAACAAAGAGT+TGG | - | chr4_4:15322371-15322390 | None:intergenic | 40.0% | |
| !! | CGTATGTTGGTTTGGTTGGT+AGG | - | chr4_4:15317000-15317019 | None:intergenic | 45.0% |
| !! | GGTTCGTATGTTGGTTTGGT+TGG | - | chr4_4:15317004-15317023 | None:intergenic | 45.0% |
| AGAAGACGCCCTAAATCTAC+TGG | - | chr4_4:15317025-15317044 | None:intergenic | 45.0% | |
| TCGAGCACTTAAGAGATTGC+GGG | + | chr4_4:15317507-15317526 | Msa0671600:intron | 45.0% | |
| GTTAGGCCAAACATTGTGAC+AGG | - | chr4_4:15317650-15317669 | None:intergenic | 45.0% | |
| TCTGCATGTCCTAGCTCAAT+TGG | - | chr4_4:15317689-15317708 | None:intergenic | 45.0% | |
| TGTGACAGTGAATCAAGGAC+TGG | + | chr4_4:15318328-15318347 | Msa0671600:intron | 45.0% | |
| ACTTGTGATGTGCAGGAATG+GGG | - | chr4_4:15318680-15318699 | None:intergenic | 45.0% | |
| GAGGTGGAGAGTTCAAAACT+TGG | - | chr4_4:15318876-15318895 | None:intergenic | 45.0% | |
| ! | GTAGTGGAGTACTAATGAGG+AGG | - | chr4_4:15318895-15318914 | None:intergenic | 45.0% |
| ! | GGAGTAGTGGAGTACTAATG+AGG | - | chr4_4:15318898-15318917 | None:intergenic | 45.0% |
| AGTTGAGTAAGGGACACCAA+AGG | - | chr4_4:15318919-15318938 | None:intergenic | 45.0% | |
| AGAACACTGGGAGCAACAAT+GGG | + | chr4_4:15319133-15319152 | Msa0671600:intron | 45.0% | |
| GGTTGACATTCAAGTGTGAG+TGG | - | chr4_4:15319210-15319229 | None:intergenic | 45.0% | |
| GATGTAGGAGACTCAGGATT+GGG | - | chr4_4:15319241-15319260 | None:intergenic | 45.0% | |
| TGATGTAGGAGACTCAGGAT+TGG | - | chr4_4:15319242-15319261 | None:intergenic | 45.0% | |
| ! | GGTTTGATGGGTAGCAAAAG+AGG | - | chr4_4:15319271-15319290 | None:intergenic | 45.0% |
| CGCTAAAACTCTGCAACAAG+TGG | - | chr4_4:15319311-15319330 | None:intergenic | 45.0% | |
| !! | CACCAAGTGTTGGTAATGCA+GGG | - | chr4_4:15319723-15319742 | None:intergenic | 45.0% |
| GTAGCCATAAATTGAGGCCT+TGG | - | chr4_4:15319785-15319804 | None:intergenic | 45.0% | |
| ! | GGCATTGAACTTGGGATCAT+TGG | + | chr4_4:15319813-15319832 | Msa0671600:CDS | 45.0% |
| TCTACCACGACGGTATTCAA+GGG | + | chr4_4:15320058-15320077 | Msa0671600:CDS | 45.0% | |
| GTTCTTAAGAGACGTACCTG+AGG | - | chr4_4:15320122-15320141 | None:intergenic | 45.0% | |
| ACTCAGATCTCACAAGGATC+TGG | + | chr4_4:15320247-15320266 | Msa0671600:intron | 45.0% | |
| CTCAGATCTCACAAGGATCT+GGG | + | chr4_4:15320248-15320267 | Msa0671600:intron | 45.0% | |
| CGCCAATGAAGTTCTCACAT+TGG | - | chr4_4:15320288-15320307 | None:intergenic | 45.0% | |
| GAAAAAGTTTAGGCGGGATG+GGG | - | chr4_4:15320381-15320400 | None:intergenic | 45.0% | |
| GAGAAAAAGTTTAGGCGGGA+TGG | - | chr4_4:15320383-15320402 | None:intergenic | 45.0% | |
| ! | TCCTAAGGCCTTGATTTTGG+TGG | + | chr4_4:15320625-15320644 | Msa0671600:intron | 45.0% |
| TCCACCAAAATCAAGGCCTT+AGG | - | chr4_4:15320629-15320648 | None:intergenic | 45.0% | |
| ! | GATTTGACGTCCAGGTCTTT+TGG | + | chr4_4:15320649-15320668 | Msa0671600:intron | 45.0% |
| CCACTTGTTTAGGAGTTTGG+GGG | - | chr4_4:15320712-15320731 | None:intergenic | 45.0% | |
| CCCACTTGTTTAGGAGTTTG+GGG | - | chr4_4:15320713-15320732 | None:intergenic | 45.0% | |
| CCCCAAACTCCTAAACAAGT+GGG | + | chr4_4:15320710-15320729 | Msa0671600:intron | 45.0% | |
| TCTCACACCAAGTCGAAACA+AGG | - | chr4_4:15320744-15320763 | None:intergenic | 45.0% | |
| GAGGCAACTGAGATGTTACT+AGG | + | chr4_4:15321246-15321265 | Msa0671600:CDS | 45.0% | |
| CAGTCTAACACAAAGCGAAG+CGG | + | chr4_4:15321302-15321321 | Msa0671600:CDS | 45.0% | |
| ATGCTGTCATGCTTGAAGGA+GGG | - | chr4_4:15321458-15321477 | None:intergenic | 45.0% | |
| AATGCTGTCATGCTTGAAGG+AGG | - | chr4_4:15321459-15321478 | None:intergenic | 45.0% | |
| ! | TGTAGCTCGGTAGGAAGTTT+TGG | - | chr4_4:15321564-15321583 | None:intergenic | 45.0% |
| TTCACGTCACAAACTCCAGA+TGG | + | chr4_4:15321774-15321793 | Msa0671600:CDS | 45.0% | |
| GTCACAAACTCCAGATGGTT+TGG | + | chr4_4:15321779-15321798 | Msa0671600:CDS | 45.0% | |
| ! | TCCAGATGGTTTGGAAAGCT+TGG | + | chr4_4:15321788-15321807 | Msa0671600:CDS | 45.0% |
| ! | CCAGATGGTTTGGAAAGCTT+GGG | + | chr4_4:15321789-15321808 | Msa0671600:CDS | 45.0% |
| ! | TGGTTTGGAAAGCTTGGGAA+TGG | + | chr4_4:15321794-15321813 | Msa0671600:CDS | 45.0% |
| GGTTTGGAAAGCTTGGGAAT+GGG | + | chr4_4:15321795-15321814 | Msa0671600:CDS | 45.0% | |
| GTTTGGAAAGCTTGGGAATG+GGG | + | chr4_4:15321796-15321815 | Msa0671600:CDS | 45.0% | |
| TCAAGTGGTCAAGGACAACA+TGG | + | chr4_4:15321891-15321910 | Msa0671600:CDS | 45.0% | |
| TGGTCAAGGACAACATGGTT+GGG | + | chr4_4:15321896-15321915 | Msa0671600:CDS | 45.0% | |
| CAAGAAGGATGTCCTGACTT+TGG | + | chr4_4:15322125-15322144 | Msa0671600:three_prime_UTR | 45.0% | |
| GAAACTATGGCACCAAAGTC+AGG | - | chr4_4:15322140-15322159 | None:intergenic | 45.0% | |
| GTTAAATATGTGGCCACCCT+TGG | - | chr4_4:15322249-15322268 | None:intergenic | 45.0% | |
| !!! | TTTAAAGAATTTTTTTTATA+AGG | - | chr4_4:15321150-15321169 | None:intergenic | 5.0% |
| GTGACAGGAGTTCAAACCTC+CGG | - | chr4_4:15317635-15317654 | None:intergenic | 50.0% | |
| !! | GAATCAAGGACTGGTTGCAG+TGG | + | chr4_4:15318337-15318356 | Msa0671600:CDS | 50.0% |
| TGCCAGTGGCTCAATGCTTT+AGG | + | chr4_4:15318753-15318772 | Msa0671600:intron | 50.0% | |
| !! | CACCTAAAGCATTGAGCCAC+TGG | - | chr4_4:15318758-15318777 | None:intergenic | 50.0% |
| ! | GTGGAGTACTAATGAGGAGG+TGG | - | chr4_4:15318892-15318911 | None:intergenic | 50.0% |
| AAGGGACACCAAAGGAGTAG+TGG | - | chr4_4:15318911-15318930 | None:intergenic | 50.0% | |
| GTGTCCCTTACTCAACTCTC+TGG | + | chr4_4:15318922-15318941 | Msa0671600:intron | 50.0% | |
| GAGAACACTGGGAGCAACAA+TGG | + | chr4_4:15319132-15319151 | Msa0671600:intron | 50.0% | |
| TAGGAGACTCAGGATTGGGA+GGG | - | chr4_4:15319237-15319256 | None:intergenic | 50.0% | |
| GACCCTGCATTACCAACACT+TGG | + | chr4_4:15319718-15319737 | Msa0671600:CDS | 50.0% | |
| !! | GCACCAAGTGTTGGTAATGC+AGG | - | chr4_4:15319724-15319743 | None:intergenic | 50.0% |
| ACTACAGGACATTGGGTGCT+TGG | + | chr4_4:15319865-15319884 | Msa0671600:CDS | 50.0% | |
| GACATTGGGTGCTTGGATTC+TGG | + | chr4_4:15319872-15319891 | Msa0671600:CDS | 50.0% | |
| CTCTACCACGACGGTATTCA+AGG | + | chr4_4:15320057-15320076 | Msa0671600:CDS | 50.0% | |
| CTACCACGACGGTATTCAAG+GGG | + | chr4_4:15320059-15320078 | Msa0671600:CDS | 50.0% | |
| TACACCATGCAAATGGCCTC+AGG | + | chr4_4:15320103-15320122 | Msa0671600:CDS | 50.0% | |
| TACAAGGGGCCAATGTAGAC+TGG | + | chr4_4:15320205-15320224 | Msa0671600:intron | 50.0% | |
| TTGGTGGAGATTTGACGTCC+AGG | + | chr4_4:15320641-15320660 | Msa0671600:intron | 50.0% | |
| CCCCCAAACTCCTAAACAAG+TGG | + | chr4_4:15320709-15320728 | Msa0671600:intron | 50.0% | |
| !! | ACTTGGTGTGAGAGCGTTAG+TGG | + | chr4_4:15320751-15320770 | Msa0671600:intron | 50.0% |
| !! | CACTTGAGGGCGAGTTTTGT+TGG | + | chr4_4:15320814-15320833 | Msa0671600:intron | 50.0% |
| CCCAAGCTTTCCAAACCATC+TGG | - | chr4_4:15321792-15321811 | None:intergenic | 50.0% | |
| TCCGCACTTGGTTGCTATGT+CGG | + | chr4_4:15321834-15321853 | Msa0671600:CDS | 50.0% | |
| ACCGACATAGCAACCAAGTG+CGG | - | chr4_4:15321838-15321857 | None:intergenic | 50.0% | |
| GTGGTCAAGGACAACATGGT+TGG | + | chr4_4:15321895-15321914 | Msa0671600:CDS | 50.0% | |
| GGTAGCTCATCCCTTACCAA+GGG | + | chr4_4:15322230-15322249 | Msa0671600:three_prime_UTR | 50.0% | |
| TATGTGGCCACCCTTGGTAA+GGG | - | chr4_4:15322243-15322262 | None:intergenic | 50.0% | |
| ATATGTGGCCACCCTTGGTA+AGG | - | chr4_4:15322244-15322263 | None:intergenic | 50.0% | |
| ACACACACAAGTGGACGAGC+CGG | + | chr4_4:15317613-15317632 | Msa0671600:intron | 55.0% | |
| CGCAGGAGTGGAGGCAAATT+TGG | + | chr4_4:15318364-15318383 | Msa0671600:CDS | 55.0% | |
| ACTCAGGATTGGGAGGGAGA+TGG | - | chr4_4:15319231-15319250 | None:intergenic | 55.0% | |
| GTAGGAGACTCAGGATTGGG+AGG | - | chr4_4:15319238-15319257 | None:intergenic | 55.0% | |
| GGGGAAGATCTCTACCACGA+CGG | + | chr4_4:15320048-15320067 | Msa0671600:CDS | 55.0% | |
| CATCCCCTTGAATACCGTCG+TGG | - | chr4_4:15320065-15320084 | None:intergenic | 55.0% | |
| CGTACCTGAGGCCATTTGCA+TGG | - | chr4_4:15320110-15320129 | None:intergenic | 55.0% | |
| GGGTAGCTCATCCCTTACCA+AGG | + | chr4_4:15322229-15322248 | Msa0671600:three_prime_UTR | 55.0% | |
| AGCTCATCCCTTACCAAGGG+TGG | + | chr4_4:15322233-15322252 | Msa0671600:three_prime_UTR | 55.0% | |
| CTGGTTGCAGTGGCTTTCGC+AGG | + | chr4_4:15318347-15318366 | Msa0671600:CDS | 60.0% | |
| TGCAGTGGCTTTCGCAGGAG+TGG | + | chr4_4:15318352-15318371 | Msa0671600:CDS | 60.0% | |
| AGTGGCTTTCGCAGGAGTGG+AGG | + | chr4_4:15318355-15318374 | Msa0671600:CDS | 60.0% | |
| ! | CTGGGGGCACATCAGGACTA+GGG | - | chr4_4:15320356-15320375 | None:intergenic | 60.0% |
| TTTAGGCGGGATGGGGTCCT+GGG | - | chr4_4:15320374-15320393 | None:intergenic | 60.0% | |
| CACACAAGTGGACGAGCCGG+AGG | + | chr4_4:15317616-15317635 | Msa0671600:intron | 65.0% | |
| ! | CCTGGGGGCACATCAGGACT+AGG | - | chr4_4:15320357-15320376 | None:intergenic | 65.0% |
| CCTAGTCCTGATGTGCCCCC+AGG | + | chr4_4:15320354-15320373 | Msa0671600:intron | 65.0% | |
| TTAGGCGGGATGGGGTCCTG+GGG | - | chr4_4:15320373-15320392 | None:intergenic | 65.0% | |
| GTTTAGGCGGGATGGGGTCC+TGG | - | chr4_4:15320375-15320394 | None:intergenic | 65.0% | |
| ! | TGGGGTCCTGGGGGCACATC+AGG | - | chr4_4:15320363-15320382 | None:intergenic | 70.0% |
| TAGGCGGGATGGGGTCCTGG+GGG | - | chr4_4:15320372-15320391 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 15316985 | 15322424 | 15316985 | ID=Msa0671600;Name=Msa0671600 |
| chr4_4 | mRNA | 15316985 | 15322424 | 15316985 | ID=Msa0671600-mRNA-1;Parent=Msa0671600;Name=Msa0671600-mRNA-1;_AED=0.02;_eAED=0.02;_QI=183|1|1|1|1|1|5|390|582 |
| chr4_4 | exon | 15316985 | 15317200 | 15316985 | ID=Msa0671600-mRNA-1:exon:4608;Parent=Msa0671600-mRNA-1 |
| chr4_4 | exon | 15317310 | 15317427 | 15317310 | ID=Msa0671600-mRNA-1:exon:4609;Parent=Msa0671600-mRNA-1 |
| chr4_4 | exon | 15318336 | 15318553 | 15318336 | ID=Msa0671600-mRNA-1:exon:4610;Parent=Msa0671600-mRNA-1 |
| chr4_4 | exon | 15319565 | 15320124 | 15319565 | ID=Msa0671600-mRNA-1:exon:4611;Parent=Msa0671600-mRNA-1 |
| chr4_4 | exon | 15321215 | 15322424 | 15321215 | ID=Msa0671600-mRNA-1:exon:4612;Parent=Msa0671600-mRNA-1 |
| chr4_4 | five_prime_UTR | 15316985 | 15317167 | 15316985 | ID=Msa0671600-mRNA-1:five_prime_utr;Parent=Msa0671600-mRNA-1 |
| chr4_4 | CDS | 15317168 | 15317200 | 15317168 | ID=Msa0671600-mRNA-1:cds;Parent=Msa0671600-mRNA-1 |
| chr4_4 | CDS | 15317310 | 15317427 | 15317310 | ID=Msa0671600-mRNA-1:cds;Parent=Msa0671600-mRNA-1 |
| chr4_4 | CDS | 15318336 | 15318553 | 15318336 | ID=Msa0671600-mRNA-1:cds;Parent=Msa0671600-mRNA-1 |
| chr4_4 | CDS | 15319565 | 15320124 | 15319565 | ID=Msa0671600-mRNA-1:cds;Parent=Msa0671600-mRNA-1 |
| chr4_4 | CDS | 15321215 | 15322034 | 15321215 | ID=Msa0671600-mRNA-1:cds;Parent=Msa0671600-mRNA-1 |
| chr4_4 | three_prime_UTR | 15322035 | 15322424 | 15322035 | ID=Msa0671600-mRNA-1:three_prime_utr;Parent=Msa0671600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
