Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428370 | XP_024638218.1 | 92.164 | 587 | 12 | 3 | 1 | 568 | 1 | 572 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428370 | sp|Q9LQL2|PTR14_ARATH | 43.813 | 598 | 282 | 10 | 4 | 572 | 8 | 580 | 3.75e-158 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428370 | A0A396I0T1 | 92.164 | 587 | 12 | 3 | 1 | 568 | 1 | 572 | 0.0 | 1085 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1428370 | -0.835679 | 1.458326e-56 | -8.615850e-47 |
| Msa0010020 | Msa1428370 | 0.804231 | 2.385298e-49 | -8.615850e-47 |
| Msa0027580 | Msa1428370 | 0.800698 | 1.275323e-48 | -8.615850e-47 |
| Msa0075340 | Msa1428370 | 0.800357 | 1.496875e-48 | -8.615850e-47 |
| Msa1355700 | Msa1428370 | 0.800437 | 1.442198e-48 | -8.615850e-47 |
| Msa1362510 | Msa1428370 | 0.800715 | 1.265401e-48 | -8.615850e-47 |
| Msa1390310 | Msa1428370 | 0.802301 | 5.988016e-49 | -8.615850e-47 |
| Msa1428370 | Msa1439960 | 0.807636 | 4.589259e-50 | -8.615850e-47 |
| Msa1428370 | Msa1442220 | -0.809510 | 1.826266e-50 | -8.615850e-47 |
| Msa1428370 | Msa1452480 | 0.816351 | 5.783150e-52 | -8.615850e-47 |
| Msa1428370 | Msa1466090 | 0.806714 | 7.193619e-50 | -8.615850e-47 |
| Msa0626680 | Msa1428370 | 0.808053 | 3.740323e-50 | -8.615850e-47 |
| Msa0643250 | Msa1428370 | 0.816310 | 5.907091e-52 | -8.615850e-47 |
| Msa0664760 | Msa1428370 | 0.811565 | 6.571571e-51 | -8.615850e-47 |
| Msa0671600 | Msa1428370 | 0.966032 | 2.210599e-125 | -8.615850e-47 |
| Msa0735620 | Msa1428370 | -0.813640 | 2.311260e-51 | -8.615850e-47 |
| Msa0744090 | Msa1428370 | 0.805260 | 1.454393e-49 | -8.615850e-47 |
| Msa0754720 | Msa1428370 | -0.817682 | 2.904796e-52 | -8.615850e-47 |
| Msa0814630 | Msa1428370 | -0.820730 | 5.876818e-53 | -8.615850e-47 |
| Msa0825280 | Msa1428370 | 0.806075 | 9.808758e-50 | -8.615850e-47 |
| Msa0135420 | Msa1428370 | 0.802514 | 5.412284e-49 | -8.615850e-47 |
| Msa0136380 | Msa1428370 | 0.806094 | 9.719375e-50 | -8.615850e-47 |
| Msa0172350 | Msa1428370 | 0.804835 | 1.785370e-49 | -8.615850e-47 |
| Msa0226470 | Msa1428370 | 0.807379 | 5.202990e-50 | -8.615850e-47 |
| Msa0227400 | Msa1428370 | 0.809197 | 2.131729e-50 | -8.615850e-47 |
| Msa0387910 | Msa1428370 | 0.805413 | 1.351297e-49 | -8.615850e-47 |
| Msa1093330 | Msa1428370 | 0.810199 | 1.298191e-50 | -8.615850e-47 |
| Msa0239940 | Msa1428370 | 0.824914 | 6.233690e-54 | -8.615850e-47 |
| Msa0267870 | Msa1428370 | 0.802571 | 5.266084e-49 | -8.615850e-47 |
| Msa0275400 | Msa1428370 | -0.803589 | 3.243576e-49 | -8.615850e-47 |
| Msa0308200 | Msa1428370 | 0.808289 | 3.331696e-50 | -8.615850e-47 |
| Msa0308220 | Msa1428370 | 0.815694 | 8.108773e-52 | -8.615850e-47 |
| Msa1129400 | Msa1428370 | 0.800755 | 1.241811e-48 | -8.615850e-47 |
| Msa1130210 | Msa1428370 | -0.818487 | 1.910470e-52 | -8.615850e-47 |
| Msa0536790 | Msa1428370 | 0.899147 | 2.641213e-77 | -8.615850e-47 |
| Msa0542160 | Msa1428370 | 0.822960 | 1.791158e-53 | -8.615850e-47 |
| Msa0547400 | Msa1428370 | 0.800044 | 1.733023e-48 | -8.615850e-47 |
| Msa0586540 | Msa1428370 | 0.879735 | 9.775698e-70 | -8.615850e-47 |
| Msa0586850 | Msa1428370 | 0.816481 | 5.409691e-52 | -8.615850e-47 |
| Msa0851470 | Msa1428370 | 0.804479 | 2.117646e-49 | -8.615850e-47 |
| Msa0855160 | Msa1428370 | -0.820432 | 6.881550e-53 | -8.615850e-47 |
| Msa0947530 | Msa1428370 | -0.807147 | 5.825962e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428370 | MtrunA17_Chr4g0011041 | 92.164 | 587 | 12 | 3 | 1 | 568 | 1 | 572 | 0.0 | 1085 |
| Msa1428370 | MtrunA17_Chr4g0011471 | 63.687 | 537 | 160 | 4 | 51 | 568 | 30 | 550 | 0.0 | 661 |
| Msa1428370 | MtrunA17_Chr4g0054891 | 45.709 | 571 | 270 | 7 | 23 | 572 | 96 | 647 | 2.66e-163 | 481 |
| Msa1428370 | MtrunA17_Chr5g0400371 | 44.463 | 596 | 290 | 7 | 1 | 572 | 76 | 654 | 1.38e-162 | 480 |
| Msa1428370 | MtrunA17_Chr7g0217461 | 43.836 | 584 | 284 | 7 | 22 | 580 | 9 | 573 | 5.96e-160 | 470 |
| Msa1428370 | MtrunA17_Chr7g0214461 | 40.429 | 559 | 285 | 10 | 32 | 568 | 73 | 605 | 4.07e-133 | 402 |
| Msa1428370 | MtrunA17_Chr1g0213711 | 39.189 | 592 | 301 | 10 | 1 | 572 | 1 | 553 | 4.23e-132 | 399 |
| Msa1428370 | MtrunA17_Chr7g0218851 | 41.071 | 560 | 282 | 10 | 32 | 568 | 41 | 575 | 9.10e-125 | 380 |
| Msa1428370 | MtrunA17_Chr8g0375311 | 34.007 | 594 | 337 | 10 | 2 | 567 | 6 | 572 | 2.64e-114 | 352 |
| Msa1428370 | MtrunA17_Chr8g0375291 | 34.518 | 591 | 338 | 10 | 4 | 568 | 6 | 573 | 2.42e-111 | 345 |
| Msa1428370 | MtrunA17_Chr8g0375351 | 33.219 | 581 | 344 | 7 | 11 | 568 | 14 | 573 | 4.46e-111 | 344 |
| Msa1428370 | MtrunA17_Chr8g0375341 | 33.105 | 583 | 344 | 8 | 11 | 569 | 14 | 574 | 2.29e-110 | 342 |
| Msa1428370 | MtrunA17_Chr8g0375331 | 32.977 | 561 | 332 | 8 | 15 | 552 | 2 | 541 | 3.74e-102 | 320 |
| Msa1428370 | MtrunA17_Chr8g0375321 | 31.919 | 589 | 352 | 9 | 4 | 568 | 7 | 570 | 7.75e-102 | 320 |
| Msa1428370 | MtrunA17_Chr3g0104011 | 34.412 | 587 | 321 | 14 | 13 | 568 | 1 | 554 | 2.16e-101 | 318 |
| Msa1428370 | MtrunA17_Chr8g0375361 | 32.821 | 585 | 345 | 9 | 8 | 568 | 12 | 572 | 8.86e-101 | 317 |
| Msa1428370 | MtrunA17_Chr7g0241741 | 32.578 | 574 | 330 | 14 | 23 | 568 | 8 | 552 | 1.08e-100 | 317 |
| Msa1428370 | MtrunA17_Chr4g0005901 | 32.373 | 590 | 343 | 14 | 5 | 568 | 3 | 562 | 1.06e-96 | 306 |
| Msa1428370 | MtrunA17_Chr7g0261811 | 31.359 | 574 | 338 | 11 | 23 | 568 | 13 | 558 | 4.00e-96 | 306 |
| Msa1428370 | MtrunA17_Chr7g0261771 | 30.952 | 588 | 349 | 11 | 11 | 568 | 2 | 562 | 1.16e-95 | 305 |
| Msa1428370 | MtrunA17_Chr7g0261881 | 30.769 | 572 | 342 | 10 | 23 | 567 | 13 | 557 | 1.30e-95 | 304 |
| Msa1428370 | MtrunA17_Chr1g0166791 | 31.533 | 574 | 337 | 9 | 23 | 568 | 10 | 555 | 2.30e-95 | 303 |
| Msa1428370 | MtrunA17_Chr5g0399061 | 32.461 | 573 | 335 | 11 | 29 | 572 | 19 | 568 | 2.80e-94 | 300 |
| Msa1428370 | MtrunA17_Chr1g0166711 | 30.703 | 583 | 347 | 9 | 13 | 567 | 1 | 554 | 9.74e-94 | 299 |
| Msa1428370 | MtrunA17_Chr7g0261791 | 31.973 | 588 | 339 | 13 | 11 | 568 | 2 | 558 | 1.39e-92 | 296 |
| Msa1428370 | MtrunA17_Chr3g0142101 | 29.432 | 581 | 353 | 10 | 12 | 568 | 10 | 557 | 9.08e-92 | 294 |
| Msa1428370 | MtrunA17_Chr1g0187241 | 30.412 | 582 | 343 | 10 | 15 | 564 | 2 | 553 | 9.77e-92 | 294 |
| Msa1428370 | MtrunA17_Chr1g0166741 | 30.159 | 567 | 343 | 10 | 15 | 559 | 4 | 539 | 8.64e-91 | 291 |
| Msa1428370 | MtrunA17_Chr3g0142091 | 30.570 | 579 | 347 | 10 | 14 | 568 | 3 | 550 | 4.81e-87 | 281 |
| Msa1428370 | MtrunA17_Chr7g0261851 | 31.282 | 585 | 348 | 10 | 11 | 568 | 2 | 559 | 3.00e-86 | 280 |
| Msa1428370 | MtrunA17_Chr3g0114501 | 29.688 | 576 | 344 | 12 | 23 | 568 | 8 | 552 | 2.48e-84 | 275 |
| Msa1428370 | MtrunA17_Chr5g0399071 | 30.420 | 572 | 348 | 8 | 29 | 572 | 17 | 566 | 6.51e-84 | 273 |
| Msa1428370 | MtrunA17_Chr1g0166771 | 30.402 | 523 | 315 | 8 | 58 | 559 | 12 | 506 | 3.63e-83 | 270 |
| Msa1428370 | MtrunA17_Chr4g0014871 | 29.597 | 571 | 331 | 11 | 25 | 568 | 18 | 544 | 3.14e-82 | 268 |
| Msa1428370 | MtrunA17_Chr4g0063591 | 32.982 | 570 | 335 | 11 | 21 | 568 | 6 | 550 | 9.91e-81 | 265 |
| Msa1428370 | MtrunA17_Chr3g0112671 | 28.076 | 577 | 364 | 10 | 11 | 568 | 7 | 551 | 6.35e-78 | 257 |
| Msa1428370 | MtrunA17_Chr4g0056431 | 30.580 | 569 | 345 | 11 | 29 | 568 | 17 | 564 | 1.25e-77 | 257 |
| Msa1428370 | MtrunA17_Chr3g0077151 | 30.435 | 575 | 315 | 12 | 23 | 567 | 14 | 533 | 1.40e-75 | 250 |
| Msa1428370 | MtrunA17_Chr2g0276751 | 30.135 | 594 | 352 | 14 | 15 | 587 | 21 | 572 | 1.42e-75 | 251 |
| Msa1428370 | MtrunA17_Chr4g0014791 | 28.196 | 571 | 336 | 10 | 25 | 568 | 17 | 540 | 1.54e-75 | 250 |
| Msa1428370 | MtrunA17_Chr4g0014841 | 29.268 | 574 | 332 | 12 | 22 | 568 | 14 | 540 | 1.06e-74 | 248 |
| Msa1428370 | MtrunA17_Chr4g0014801 | 28.897 | 571 | 334 | 11 | 25 | 568 | 17 | 542 | 3.65e-73 | 244 |
| Msa1428370 | MtrunA17_Chr7g0240381 | 26.288 | 563 | 366 | 9 | 25 | 568 | 17 | 549 | 8.03e-71 | 238 |
| Msa1428370 | MtrunA17_Chr1g0166731 | 31.670 | 461 | 272 | 8 | 135 | 567 | 6 | 451 | 1.44e-70 | 235 |
| Msa1428370 | MtrunA17_Chr4g0008651 | 26.825 | 589 | 381 | 12 | 1 | 568 | 1 | 560 | 2.54e-70 | 238 |
| Msa1428370 | MtrunA17_Chr7g0261751 | 30.526 | 475 | 273 | 9 | 11 | 448 | 2 | 456 | 3.30e-68 | 230 |
| Msa1428370 | MtrunA17_Chr4g0014781 | 28.421 | 570 | 338 | 11 | 25 | 567 | 17 | 543 | 5.53e-68 | 230 |
| Msa1428370 | MtrunA17_Chr5g0422881 | 27.451 | 561 | 353 | 8 | 37 | 568 | 20 | 555 | 3.56e-67 | 229 |
| Msa1428370 | MtrunA17_Chr3g0112611 | 24.567 | 578 | 385 | 9 | 15 | 568 | 10 | 560 | 9.36e-66 | 225 |
| Msa1428370 | MtrunA17_Chr7g0240271 | 27.289 | 568 | 373 | 7 | 24 | 568 | 11 | 561 | 1.08e-64 | 222 |
| Msa1428370 | MtrunA17_Chr2g0284701 | 27.787 | 583 | 360 | 13 | 25 | 568 | 19 | 579 | 1.19e-64 | 223 |
| Msa1428370 | MtrunA17_Chr7g0261661 | 31.057 | 454 | 273 | 9 | 142 | 568 | 4 | 444 | 1.82e-64 | 219 |
| Msa1428370 | MtrunA17_Chr3g0133341 | 26.252 | 579 | 356 | 11 | 33 | 578 | 10 | 550 | 3.65e-64 | 220 |
| Msa1428370 | MtrunA17_Chr7g0255621 | 26.746 | 587 | 376 | 11 | 13 | 572 | 1 | 560 | 1.24e-63 | 220 |
| Msa1428370 | MtrunA17_Chr1g0193391 | 27.022 | 581 | 360 | 14 | 25 | 578 | 3 | 546 | 5.35e-63 | 218 |
| Msa1428370 | MtrunA17_Chr8g0353031 | 27.592 | 569 | 337 | 14 | 41 | 577 | 22 | 547 | 7.28e-63 | 217 |
| Msa1428370 | MtrunA17_Chr7g0255611 | 27.320 | 571 | 364 | 11 | 24 | 567 | 18 | 564 | 9.86e-63 | 217 |
| Msa1428370 | MtrunA17_Chr5g0439381 | 27.414 | 580 | 363 | 8 | 12 | 568 | 3 | 547 | 1.97e-62 | 216 |
| Msa1428370 | MtrunA17_Chr4g0059981 | 26.842 | 570 | 360 | 11 | 43 | 579 | 37 | 582 | 4.60e-62 | 216 |
| Msa1428370 | MtrunA17_Chr7g0214731 | 25.748 | 602 | 378 | 16 | 28 | 587 | 51 | 625 | 7.96e-62 | 216 |
| Msa1428370 | MtrunA17_Chr5g0415791 | 26.667 | 570 | 364 | 11 | 37 | 574 | 29 | 576 | 1.17e-61 | 214 |
| Msa1428370 | MtrunA17_Chr7g0255601 | 27.482 | 564 | 350 | 12 | 41 | 572 | 31 | 567 | 2.32e-61 | 214 |
| Msa1428370 | MtrunA17_Chr5g0415961 | 27.273 | 583 | 354 | 14 | 25 | 568 | 12 | 563 | 1.17e-59 | 208 |
| Msa1428370 | MtrunA17_Chr7g0261731 | 31.436 | 369 | 222 | 6 | 13 | 375 | 4 | 347 | 4.12e-59 | 201 |
| Msa1428370 | MtrunA17_Chr4g0069581 | 28.044 | 542 | 336 | 10 | 58 | 576 | 7 | 517 | 4.01e-58 | 204 |
| Msa1428370 | MtrunA17_Chr1g0157611 | 26.429 | 560 | 359 | 12 | 36 | 568 | 15 | 548 | 4.77e-58 | 204 |
| Msa1428370 | MtrunA17_Chr7g0271221 | 26.930 | 557 | 346 | 11 | 37 | 568 | 17 | 537 | 7.04e-58 | 204 |
| Msa1428370 | MtrunA17_Chr8g0390331 | 27.241 | 569 | 355 | 14 | 36 | 574 | 14 | 553 | 7.64e-58 | 203 |
| Msa1428370 | MtrunA17_Chr4g0014861 | 29.439 | 428 | 256 | 10 | 168 | 568 | 11 | 419 | 8.46e-57 | 197 |
| Msa1428370 | MtrunA17_Chr4g0060001 | 25.301 | 581 | 386 | 10 | 15 | 567 | 2 | 562 | 2.38e-56 | 200 |
| Msa1428370 | MtrunA17_Chr1g0157601 | 27.273 | 550 | 337 | 16 | 38 | 555 | 16 | 534 | 3.19e-56 | 199 |
| Msa1428370 | MtrunA17_Chr4g0059991 | 25.933 | 563 | 360 | 11 | 36 | 564 | 21 | 560 | 8.58e-56 | 198 |
| Msa1428370 | MtrunA17_Chr4g0059971 | 23.802 | 605 | 403 | 11 | 4 | 576 | 6 | 584 | 4.33e-55 | 196 |
| Msa1428370 | MtrunA17_Chr8g0379971 | 27.352 | 574 | 348 | 13 | 25 | 548 | 8 | 562 | 6.68e-55 | 196 |
| Msa1428370 | MtrunA17_Chr1g0147631 | 26.998 | 563 | 355 | 14 | 41 | 574 | 29 | 564 | 7.62e-55 | 196 |
| Msa1428370 | MtrunA17_Chr8g0362781 | 24.339 | 567 | 378 | 10 | 33 | 568 | 26 | 572 | 2.09e-54 | 194 |
| Msa1428370 | MtrunA17_Chr3g0142111 | 31.562 | 320 | 201 | 4 | 14 | 331 | 23 | 326 | 2.19e-52 | 182 |
| Msa1428370 | MtrunA17_Chr2g0326211 | 25.789 | 570 | 364 | 12 | 25 | 568 | 2 | 538 | 1.35e-51 | 186 |
| Msa1428370 | MtrunA17_Chr8g0362711 | 26.667 | 570 | 371 | 11 | 26 | 568 | 13 | 562 | 3.93e-51 | 185 |
| Msa1428370 | MtrunA17_Chr2g0331521 | 24.486 | 584 | 387 | 14 | 37 | 591 | 22 | 580 | 1.96e-50 | 183 |
| Msa1428370 | MtrunA17_Chr2g0325951 | 26.316 | 570 | 361 | 12 | 25 | 568 | 2 | 538 | 2.82e-50 | 182 |
| Msa1428370 | MtrunA17_Chr7g0240281 | 25.180 | 556 | 376 | 7 | 37 | 568 | 24 | 563 | 1.48e-49 | 181 |
| Msa1428370 | MtrunA17_Chr1g0157621 | 25.512 | 537 | 340 | 14 | 62 | 568 | 5 | 511 | 3.07e-49 | 179 |
| Msa1428370 | MtrunA17_Chr4g0003761 | 23.754 | 602 | 398 | 14 | 1 | 574 | 1 | 569 | 5.75e-49 | 179 |
| Msa1428370 | MtrunA17_Chr7g0240211 | 27.716 | 451 | 298 | 7 | 142 | 568 | 4 | 450 | 7.94e-49 | 177 |
| Msa1428370 | MtrunA17_Chr7g0240181 | 27.716 | 451 | 298 | 7 | 142 | 568 | 4 | 450 | 1.14e-48 | 176 |
| Msa1428370 | MtrunA17_Chr7g0235521 | 27.111 | 450 | 302 | 5 | 142 | 568 | 4 | 450 | 1.17e-48 | 176 |
| Msa1428370 | MtrunA17_Chr7g0240131 | 27.494 | 451 | 299 | 7 | 142 | 568 | 4 | 450 | 3.91e-48 | 175 |
| Msa1428370 | MtrunA17_Chr2g0325961 | 26.095 | 571 | 362 | 12 | 25 | 568 | 2 | 539 | 4.30e-46 | 171 |
| Msa1428370 | MtrunA17_Chr8g0379991 | 26.902 | 539 | 296 | 15 | 81 | 548 | 24 | 535 | 3.91e-45 | 168 |
| Msa1428370 | MtrunA17_Chr3g0082631 | 26.869 | 428 | 274 | 8 | 173 | 568 | 30 | 450 | 6.74e-45 | 166 |
| Msa1428370 | MtrunA17_Chr2g0331481 | 24.386 | 570 | 377 | 13 | 33 | 574 | 23 | 566 | 6.88e-45 | 169 |
| Msa1428370 | MtrunA17_Chr7g0240151 | 27.494 | 451 | 281 | 8 | 142 | 568 | 4 | 432 | 1.45e-44 | 164 |
| Msa1428370 | MtrunA17_Chr2g0331471 | 24.864 | 551 | 362 | 13 | 52 | 574 | 103 | 629 | 3.32e-44 | 167 |
| Msa1428370 | MtrunA17_Chr8g0362801 | 26.638 | 458 | 302 | 9 | 139 | 568 | 1 | 452 | 9.17e-44 | 162 |
| Msa1428370 | MtrunA17_Chr1g0177591 | 24.737 | 570 | 349 | 18 | 49 | 587 | 54 | 574 | 9.35e-44 | 164 |
| Msa1428370 | MtrunA17_Chr2g0331511 | 22.101 | 552 | 382 | 11 | 49 | 574 | 33 | 562 | 2.32e-41 | 158 |
| Msa1428370 | MtrunA17_Chr6g0451841 | 25.668 | 561 | 332 | 14 | 45 | 567 | 13 | 526 | 1.82e-39 | 152 |
| Msa1428370 | MtrunA17_Chr1g0177611 | 24.890 | 454 | 292 | 13 | 161 | 587 | 14 | 445 | 4.15e-38 | 146 |
| Msa1428370 | MtrunA17_Chr5g0415841 | 24.667 | 450 | 298 | 11 | 139 | 559 | 4 | 441 | 5.47e-36 | 140 |
| Msa1428370 | MtrunA17_Chr1g0177631 | 23.789 | 454 | 297 | 14 | 161 | 587 | 14 | 445 | 2.65e-35 | 138 |
| Msa1428370 | MtrunA17_Chr2g0331461 | 23.211 | 573 | 380 | 15 | 33 | 574 | 23 | 566 | 1.03e-34 | 139 |
| Msa1428370 | MtrunA17_Chr3g0112631 | 26.568 | 271 | 163 | 7 | 324 | 568 | 3 | 263 | 1.21e-31 | 124 |
| Msa1428370 | MtrunA17_Chr3g0142121 | 29.323 | 266 | 149 | 7 | 325 | 568 | 11 | 259 | 1.84e-29 | 118 |
| Msa1428370 | MtrunA17_Chr7g0234181 | 25.822 | 426 | 238 | 10 | 175 | 568 | 28 | 407 | 1.93e-28 | 117 |
| Msa1428370 | MtrunA17_Chr7g0234151 | 26.316 | 418 | 246 | 12 | 175 | 568 | 33 | 412 | 1.01e-27 | 115 |
| Msa1428370 | MtrunA17_Chr7g0234381 | 26.619 | 417 | 246 | 12 | 175 | 568 | 33 | 412 | 6.82e-27 | 113 |
| Msa1428370 | MtrunA17_Chr4g0060071 | 27.197 | 239 | 148 | 5 | 354 | 568 | 53 | 289 | 1.18e-22 | 99.0 |
| Msa1428370 | MtrunA17_Chr7g0261671 | 36.207 | 116 | 71 | 1 | 11 | 123 | 3 | 118 | 1.44e-21 | 90.5 |
| Msa1428370 | MtrunA17_Chr7g0261721 | 30.526 | 190 | 107 | 4 | 402 | 568 | 5 | 192 | 4.96e-20 | 89.7 |
| Msa1428370 | MtrunA17_Chr3g0112651 | 28.125 | 192 | 127 | 3 | 137 | 325 | 20 | 203 | 3.65e-19 | 86.7 |
| Msa1428370 | MtrunA17_Chr4g0014851 | 37.374 | 99 | 62 | 0 | 25 | 123 | 18 | 116 | 1.66e-17 | 80.1 |
| Msa1428370 | MtrunA17_Chr1g0166721 | 30.631 | 111 | 77 | 0 | 13 | 123 | 1 | 111 | 5.01e-17 | 78.6 |
| Msa1428370 | MtrunA17_Chr4g0060061 | 31.356 | 118 | 81 | 0 | 161 | 278 | 6 | 123 | 6.93e-16 | 74.7 |
| Msa1428370 | MtrunA17_Chr7g0261831 | 28.105 | 153 | 96 | 3 | 282 | 431 | 3 | 144 | 5.04e-15 | 74.3 |
| Msa1428370 | MtrunA17_Chr1g0147591 | 22.500 | 200 | 145 | 4 | 180 | 376 | 9 | 201 | 2.07e-14 | 72.4 |
| Msa1428370 | MtrunA17_Chr3g0112661 | 35.354 | 99 | 64 | 0 | 25 | 123 | 19 | 117 | 1.21e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1428370 | AT1G32450.1 | 43.813 | 598 | 282 | 10 | 4 | 572 | 8 | 580 | 3.81e-159 | 469 |
| Msa1428370 | AT4G21680.1 | 43.426 | 578 | 281 | 8 | 22 | 572 | 11 | 569 | 7.90e-149 | 442 |
| Msa1428370 | AT5G19640.1 | 38.954 | 593 | 310 | 9 | 11 | 587 | 31 | 587 | 3.48e-135 | 407 |
| Msa1428370 | AT2G02040.1 | 34.501 | 571 | 324 | 9 | 23 | 567 | 25 | 571 | 1.84e-112 | 348 |
| Msa1428370 | AT1G62200.1 | 33.447 | 589 | 346 | 10 | 1 | 567 | 13 | 577 | 1.22e-107 | 336 |
| Msa1428370 | AT3G54140.1 | 33.450 | 571 | 331 | 11 | 23 | 568 | 8 | 554 | 1.94e-103 | 324 |
| Msa1428370 | AT3G54140.2 | 33.450 | 571 | 331 | 11 | 23 | 568 | 8 | 554 | 1.94e-103 | 324 |
| Msa1428370 | AT1G62200.2 | 32.039 | 618 | 345 | 11 | 1 | 567 | 13 | 606 | 4.47e-102 | 322 |
| Msa1428370 | AT1G62200.3 | 32.039 | 618 | 345 | 11 | 1 | 567 | 27 | 620 | 8.14e-102 | 322 |
| Msa1428370 | AT5G01180.2 | 32.750 | 571 | 334 | 12 | 23 | 568 | 9 | 554 | 1.33e-100 | 317 |
| Msa1428370 | AT5G01180.3 | 32.750 | 571 | 334 | 12 | 23 | 568 | 9 | 554 | 1.33e-100 | 317 |
| Msa1428370 | AT5G01180.1 | 32.750 | 571 | 334 | 12 | 23 | 568 | 9 | 554 | 1.33e-100 | 317 |
| Msa1428370 | AT5G46040.1 | 30.594 | 572 | 340 | 11 | 13 | 557 | 3 | 544 | 9.67e-95 | 302 |
| Msa1428370 | AT2G26690.1 | 31.409 | 589 | 361 | 8 | 18 | 587 | 3 | 567 | 7.71e-92 | 294 |
| Msa1428370 | AT5G46050.1 | 31.315 | 578 | 328 | 12 | 13 | 557 | 3 | 544 | 4.80e-90 | 290 |
| Msa1428370 | AT2G02020.1 | 30.809 | 581 | 315 | 10 | 12 | 568 | 17 | 534 | 5.29e-90 | 288 |
| Msa1428370 | AT2G26690.3 | 31.376 | 545 | 331 | 8 | 62 | 587 | 2 | 522 | 3.85e-84 | 273 |
| Msa1428370 | AT2G26690.2 | 31.376 | 545 | 331 | 8 | 62 | 587 | 14 | 534 | 4.02e-84 | 273 |
| Msa1428370 | AT1G12110.1 | 31.349 | 571 | 343 | 11 | 29 | 572 | 17 | 565 | 7.74e-82 | 268 |
| Msa1428370 | AT2G02020.2 | 29.776 | 581 | 300 | 12 | 12 | 568 | 17 | 513 | 4.20e-79 | 259 |
| Msa1428370 | AT1G59740.1 | 30.066 | 602 | 363 | 12 | 5 | 578 | 3 | 574 | 2.69e-78 | 259 |
| Msa1428370 | AT2G37900.1 | 28.082 | 584 | 373 | 11 | 4 | 568 | 2 | 557 | 1.02e-77 | 257 |
| Msa1428370 | AT2G40460.1 | 28.998 | 569 | 342 | 12 | 23 | 565 | 8 | 540 | 1.48e-74 | 249 |
| Msa1428370 | AT3G53960.1 | 27.434 | 565 | 366 | 10 | 25 | 568 | 23 | 564 | 2.18e-73 | 246 |
| Msa1428370 | AT1G69870.1 | 27.878 | 556 | 358 | 10 | 36 | 567 | 48 | 584 | 2.04e-71 | 241 |
| Msa1428370 | AT3G54450.1 | 27.611 | 565 | 335 | 11 | 37 | 568 | 10 | 533 | 3.52e-70 | 236 |
| Msa1428370 | AT2G37900.2 | 29.109 | 505 | 312 | 10 | 82 | 568 | 2 | 478 | 3.82e-68 | 229 |
| Msa1428370 | AT1G72140.1 | 28.397 | 574 | 321 | 14 | 27 | 565 | 22 | 540 | 2.55e-66 | 226 |
| Msa1428370 | AT3G21670.1 | 28.546 | 571 | 350 | 10 | 24 | 568 | 11 | 549 | 5.73e-66 | 226 |
| Msa1428370 | AT1G72130.1 | 28.947 | 570 | 325 | 14 | 37 | 580 | 23 | 538 | 1.60e-64 | 221 |
| Msa1428370 | AT5G46050.2 | 31.416 | 452 | 257 | 10 | 139 | 557 | 1 | 432 | 2.13e-64 | 219 |
| Msa1428370 | AT1G22540.1 | 29.401 | 568 | 333 | 12 | 27 | 568 | 18 | 543 | 2.73e-64 | 221 |
| Msa1428370 | AT1G33440.1 | 30.404 | 569 | 340 | 15 | 25 | 568 | 24 | 561 | 1.82e-63 | 219 |
| Msa1428370 | AT5G13400.1 | 26.316 | 589 | 365 | 14 | 28 | 578 | 52 | 609 | 2.71e-63 | 219 |
| Msa1428370 | AT1G72125.1 | 27.544 | 570 | 346 | 12 | 27 | 568 | 17 | 547 | 6.29e-62 | 214 |
| Msa1428370 | AT1G52190.1 | 27.083 | 576 | 354 | 13 | 37 | 574 | 19 | 566 | 9.82e-62 | 215 |
| Msa1428370 | AT1G72120.1 | 26.838 | 585 | 351 | 15 | 27 | 579 | 17 | 556 | 1.51e-61 | 213 |
| Msa1428370 | AT3G16180.1 | 27.193 | 570 | 358 | 15 | 37 | 574 | 21 | 565 | 6.29e-61 | 213 |
| Msa1428370 | AT1G27080.1 | 26.972 | 545 | 358 | 10 | 41 | 567 | 16 | 538 | 1.51e-60 | 211 |
| Msa1428370 | AT1G68570.1 | 27.288 | 579 | 375 | 9 | 15 | 568 | 2 | 559 | 2.26e-60 | 211 |
| Msa1428370 | AT1G22570.1 | 26.562 | 576 | 353 | 11 | 11 | 555 | 2 | 538 | 4.81e-60 | 209 |
| Msa1428370 | AT5G28470.1 | 25.590 | 551 | 371 | 7 | 36 | 567 | 14 | 544 | 8.57e-60 | 209 |
| Msa1428370 | AT1G18880.1 | 26.212 | 557 | 358 | 12 | 43 | 568 | 23 | 557 | 1.31e-59 | 209 |
| Msa1428370 | AT5G28470.2 | 25.497 | 553 | 371 | 7 | 36 | 567 | 14 | 546 | 1.92e-59 | 208 |
| Msa1428370 | AT1G22550.1 | 26.917 | 587 | 360 | 11 | 12 | 568 | 3 | 550 | 3.84e-59 | 207 |
| Msa1428370 | AT1G68570.2 | 27.860 | 542 | 348 | 7 | 52 | 568 | 6 | 529 | 8.33e-59 | 206 |
| Msa1428370 | AT5G14940.1 | 27.768 | 569 | 325 | 14 | 41 | 568 | 9 | 532 | 1.60e-53 | 191 |
| Msa1428370 | AT1G27080.2 | 26.255 | 518 | 342 | 10 | 68 | 567 | 1 | 496 | 2.68e-53 | 191 |
| Msa1428370 | AT1G22570.2 | 25.947 | 528 | 321 | 11 | 59 | 555 | 13 | 501 | 2.44e-52 | 187 |
| Msa1428370 | AT5G62680.1 | 23.717 | 565 | 373 | 11 | 43 | 572 | 47 | 588 | 4.45e-52 | 189 |
| Msa1428370 | AT1G27040.1 | 26.117 | 582 | 372 | 12 | 13 | 568 | 3 | 552 | 4.79e-52 | 188 |
| Msa1428370 | AT1G27040.2 | 26.140 | 570 | 365 | 11 | 25 | 568 | 9 | 548 | 5.75e-52 | 187 |
| Msa1428370 | AT3G45710.1 | 24.545 | 550 | 364 | 11 | 41 | 572 | 23 | 539 | 2.50e-51 | 186 |
| Msa1428370 | AT1G69850.1 | 26.281 | 605 | 360 | 14 | 13 | 568 | 3 | 570 | 4.34e-51 | 186 |
| Msa1428370 | AT3G45660.2 | 24.329 | 559 | 357 | 12 | 21 | 555 | 25 | 541 | 1.82e-49 | 181 |
| Msa1428370 | AT3G45660.1 | 24.329 | 559 | 357 | 12 | 21 | 555 | 4 | 520 | 1.86e-49 | 180 |
| Msa1428370 | AT3G45660.3 | 24.329 | 559 | 357 | 12 | 21 | 555 | 4 | 520 | 1.86e-49 | 180 |
| Msa1428370 | AT3G45680.1 | 25.408 | 551 | 353 | 13 | 25 | 555 | 8 | 520 | 2.72e-49 | 180 |
| Msa1428370 | AT5G62730.1 | 25.000 | 576 | 359 | 10 | 25 | 568 | 42 | 576 | 6.02e-49 | 179 |
| Msa1428370 | AT3G45720.1 | 24.568 | 521 | 334 | 13 | 56 | 555 | 36 | 518 | 7.39e-49 | 179 |
| Msa1428370 | AT3G01350.1 | 25.601 | 582 | 339 | 12 | 37 | 568 | 5 | 542 | 2.98e-48 | 177 |
| Msa1428370 | AT1G27040.3 | 26.071 | 537 | 341 | 11 | 58 | 568 | 14 | 520 | 1.12e-47 | 175 |
| Msa1428370 | AT3G47960.1 | 24.377 | 562 | 362 | 15 | 43 | 568 | 65 | 599 | 2.53e-47 | 176 |
| Msa1428370 | AT1G72130.2 | 27.991 | 443 | 263 | 11 | 164 | 580 | 8 | 420 | 4.47e-46 | 168 |
| Msa1428370 | AT1G72130.3 | 27.991 | 443 | 263 | 11 | 164 | 580 | 8 | 420 | 4.47e-46 | 168 |
| Msa1428370 | AT3G45650.1 | 23.878 | 557 | 365 | 11 | 20 | 555 | 3 | 521 | 8.42e-46 | 170 |
| Msa1428370 | AT3G45700.1 | 23.063 | 542 | 358 | 12 | 33 | 555 | 9 | 510 | 1.91e-44 | 166 |
| Msa1428370 | AT5G62730.2 | 24.640 | 556 | 346 | 10 | 45 | 568 | 3 | 517 | 3.60e-44 | 165 |
| Msa1428370 | AT3G45690.1 | 23.640 | 533 | 316 | 13 | 41 | 555 | 20 | 479 | 6.64e-42 | 159 |
| Msa1428370 | AT3G45650.2 | 22.813 | 583 | 365 | 12 | 20 | 555 | 3 | 547 | 1.18e-40 | 156 |
| Msa1428370 | AT3G25280.1 | 23.768 | 568 | 342 | 13 | 29 | 568 | 11 | 515 | 1.74e-38 | 149 |
| Msa1428370 | AT3G25260.1 | 21.864 | 558 | 359 | 11 | 29 | 568 | 11 | 509 | 3.32e-37 | 145 |
| Msa1428370 | AT1G69860.1 | 23.435 | 559 | 370 | 11 | 43 | 577 | 22 | 546 | 3.60e-36 | 143 |
| Msa1428370 | AT5G11570.1 | 28.862 | 246 | 146 | 6 | 350 | 574 | 239 | 476 | 1.60e-20 | 95.5 |
| Msa1428370 | AT5G11570.1 | 23.556 | 225 | 152 | 5 | 49 | 271 | 23 | 229 | 3.44e-16 | 82.0 |
| Msa1428370 | AT2G38100.2 | 22.120 | 434 | 298 | 13 | 168 | 579 | 74 | 489 | 1.22e-19 | 92.8 |
| Msa1428370 | AT2G38100.1 | 22.120 | 434 | 298 | 13 | 168 | 579 | 90 | 505 | 1.89e-19 | 92.4 |
| Msa1428370 | AT2G38100.3 | 22.120 | 434 | 298 | 13 | 168 | 579 | 96 | 511 | 1.96e-19 | 92.4 |
Find 115 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTATTTCTTCTCTTTAAT+TGG | 0.108015 | tig0026340:-19083 | Msa1428370:CDS |
| CGCAGGAGTGGAGGCAAATT+TGG | 0.185968 | tig0026340:-19180 | Msa1428370:CDS |
| GCCTTGGATCTTTGTTCTTT+AGG | 0.210052 | tig0026340:+17778 | None:intergenic |
| ACATACGAACCAGTAGATTT+AGG | 0.215294 | tig0026340:-20531 | Msa1428370:five_prime_UTR |
| GACATTGGGTGCTTGGATTC+TGG | 0.219716 | tig0026340:-17672 | Msa1428370:CDS |
| AGATCCAAGGCCTCAATTTA+TGG | 0.235422 | tig0026340:-17766 | Msa1428370:CDS |
| TACAGACACTATAAGACTTT+TGG | 0.287136 | tig0026340:-17592 | Msa1428370:CDS |
| TGTAGCTCGGTAGGAAGTTT+TGG | 0.311952 | tig0026340:+15982 | None:intergenic |
| ATTGGTTGCTGAGACTATAT+TGG | 0.326940 | tig0026340:-17713 | Msa1428370:CDS |
| TCCAATTAAAGAGAAGAAAT+AGG | 0.340141 | tig0026340:+19082 | None:intergenic |
| CATACGAACCAGTAGATTTA+GGG | 0.351552 | tig0026340:-20530 | Msa1428370:five_prime_UTR |
| AAATTTCAAATACAATCAAT+TGG | 0.357133 | tig0026340:-17517 | Msa1428370:CDS |
| TAAATGATGGTCATTTAGAT+AGG | 0.361054 | tig0026340:-15613 | Msa1428370:CDS |
| TCCAGATGGTTTGGAAAGCT+TGG | 0.370188 | tig0026340:-15756 | Msa1428370:CDS |
| ATCAATTCCTGTACAAAAGA+TGG | 0.380758 | tig0026340:-20213 | Msa1428370:CDS |
| CCACATCGTTGTGAACAAAT+AGG | 0.380773 | tig0026340:-17934 | Msa1428370:CDS |
| CATCTCTTTACCATCATTGC+TGG | 0.384744 | tig0026340:+15880 | None:intergenic |
| GTAGCCATAAATTGAGGCCT+TGG | 0.385297 | tig0026340:+17762 | None:intergenic |
| TTTCTCAGTGACTCATATCT+AGG | 0.391794 | tig0026340:-19056 | Msa1428370:CDS |
| GGTTTGGAAAGCTTGGGAAT+GGG | 0.392053 | tig0026340:-15749 | Msa1428370:CDS |
| GGCATTGAACTTGGGATCAT+TGG | 0.393054 | tig0026340:-17731 | Msa1428370:CDS |
| AATTTCAAATACAATCAATT+GGG | 0.408308 | tig0026340:-17516 | Msa1428370:CDS |
| TGTAAGGTTGTTGAAGAAGA+GGG | 0.410003 | tig0026340:-20240 | Msa1428370:intron |
| TACTGGTTCGTATGTTGGTT+TGG | 0.410542 | tig0026340:+20539 | None:intergenic |
| AGAAGTGCCACATTGTTGTT+AGG | 0.414826 | tig0026340:-20138 | Msa1428370:intron |
| GTTGTGAAAACTTAGAGAAA+GGG | 0.416740 | tig0026340:+17566 | None:intergenic |
| GTCACAAACTCCAGATGGTT+TGG | 0.418889 | tig0026340:-15765 | Msa1428370:CDS |
| ACTACAGGACATTGGGTGCT+TGG | 0.420293 | tig0026340:-17679 | Msa1428370:CDS |
| AAGATTGTGCAAAACCATAT+TGG | 0.420486 | tig0026340:+16195 | None:intergenic |
| CTCTACCACGACGGTATTCA+AGG | 0.421147 | tig0026340:-17487 | Msa1428370:CDS |
| GTTTGGAAAGCTTGGGAATG+GGG | 0.423675 | tig0026340:-15748 | Msa1428370:CDS |
| AAATGACCATCATTTAGATT+AGG | 0.434159 | tig0026340:+15620 | None:intergenic |
| CCCAAGCTTTCCAAACCATC+TGG | 0.434567 | tig0026340:+15755 | None:intergenic |
| TCAAATGCTGTCATGCTTGA+AGG | 0.446123 | tig0026340:+16084 | None:intergenic |
| GAGCTATTAGATATATTGAT+AGG | 0.448423 | tig0026340:+17866 | None:intergenic |
| CGTATGTTGGTTTGGTTGGT+AGG | 0.448488 | tig0026340:+20547 | None:intergenic |
| GCACCAAGTGTTGGTAATGC+AGG | 0.448775 | tig0026340:+17823 | None:intergenic |
| CTATGCATTGTTGATAAGAA+TGG | 0.450469 | tig0026340:-20395 | Msa1428370:exon |
| TCATCACTTTAATATACAAT+GGG | 0.453981 | tig0026340:+16013 | None:intergenic |
| AGTTGTGAAAACTTAGAGAA+AGG | 0.454835 | tig0026340:+17565 | None:intergenic |
| AAATCTACTGGTTCGTATGT+TGG | 0.456113 | tig0026340:+20534 | None:intergenic |
| AGAGTGGTTTATAAGAAGGT+AGG | 0.459539 | tig0026340:+20419 | None:intergenic |
| CCAGATGGTTTGGAAAGCTT+GGG | 0.462004 | tig0026340:-15755 | Msa1428370:CDS |
| TGGTTTGGAAAGCTTGGGAA+TGG | 0.463077 | tig0026340:-15750 | Msa1428370:CDS |
| CATAGAGACTACAGGACATT+GGG | 0.463120 | tig0026340:-17686 | Msa1428370:CDS |
| TTACTATGATGAACACAAGT+TGG | 0.466550 | tig0026340:+19009 | None:intergenic |
| TGCAGTGGCTTTCGCAGGAG+TGG | 0.468532 | tig0026340:-19192 | Msa1428370:CDS |
| GTTTCACCTAATCTAAATGA+TGG | 0.478316 | tig0026340:-15626 | Msa1428370:CDS |
| TCCGCACTTGGTTGCTATGT+CGG | 0.479600 | tig0026340:-15710 | Msa1428370:CDS |
| CTTTCTCTATTTGTTGAGCA+AGG | 0.480145 | tig0026340:-16147 | Msa1428370:CDS |
| TAGGAGAGTGGTTTATAAGA+AGG | 0.480918 | tig0026340:+20415 | None:intergenic |
| TTCATCACTTTAATATACAA+TGG | 0.486599 | tig0026340:+16012 | None:intergenic |
| GAAACTATGGCACCAAAGTC+AGG | 0.489019 | tig0026340:+15407 | None:intergenic |
| GGTTCGTATGTTGGTTTGGT+TGG | 0.492274 | tig0026340:+20543 | None:intergenic |
| CTGGTTGCAGTGGCTTTCGC+AGG | 0.492804 | tig0026340:-19197 | Msa1428370:CDS |
| TCAATATATCTAATAGCTCT+AGG | 0.497358 | tig0026340:-17862 | Msa1428370:CDS |
| TGGTCAAGGACAACATGGTT+GGG | 0.502264 | tig0026340:-15648 | Msa1428370:CDS |
| GTAAGGTTGTTGAAGAAGAG+GGG | 0.503830 | tig0026340:-20239 | Msa1428370:intron |
| AAAATACTTTGTAGCTCGGT+AGG | 0.505762 | tig0026340:+15973 | None:intergenic |
| CAAGAAGGATGTCCTGACTT+TGG | 0.507108 | tig0026340:-15419 | Msa1428370:CDS |
| TATCTAATAGCTCTAGGAAG+TGG | 0.508615 | tig0026340:-17856 | Msa1428370:CDS |
| ATGGGTTAATCAAAATTTCA+AGG | 0.510125 | tig0026340:-18393 | Msa1428370:intron |
| TTGTAAGGTTGTTGAAGAAG+AGG | 0.510306 | tig0026340:-20241 | Msa1428370:intron |
| CGAACAAAATTTAGCGTCAC+AGG | 0.519909 | tig0026340:-20365 | Msa1428370:intron |
| AGAAGAATACACCATGCAAA+TGG | 0.524359 | tig0026340:-17448 | Msa1428370:CDS |
| GACCCTGCATTACCAACACT+TGG | 0.525429 | tig0026340:-17826 | Msa1428370:CDS |
| TAAATTGTGACAGTGAATCA+AGG | 0.529647 | tig0026340:-19221 | Msa1428370:intron |
| AGAAGACGCCCTAAATCTAC+TGG | 0.532407 | tig0026340:+20522 | None:intergenic |
| GATAGAATGACAAGTGGAGT+TGG | 0.539367 | tig0026340:-15471 | Msa1428370:intron |
| GTGGTCAAGGACAACATGGT+TGG | 0.539945 | tig0026340:-15649 | Msa1428370:CDS |
| GAGAACACTGGGAGCAACAA+TGG | 0.540156 | tig0026340:-18412 | Msa1428370:CDS |
| TACACCATGCAAATGGCCTC+AGG | 0.545327 | tig0026340:-17441 | Msa1428370:intron |
| GATGAAAATACTTTGTAGCT+CGG | 0.547316 | tig0026340:+15969 | None:intergenic |
| ACTGAGATGTTACTAGGTAA+AGG | 0.549750 | tig0026340:-16291 | Msa1428370:CDS |
| AAAATTACATCAAGTGGTCA+AGG | 0.554424 | tig0026340:-15662 | Msa1428370:CDS |
| GTAAATAAAATTACATCAAG+TGG | 0.555312 | tig0026340:-15668 | Msa1428370:CDS |
| TCAATTCCTGTACAAAAGAT+GGG | 0.556331 | tig0026340:-20212 | Msa1428370:CDS |
| AGAACACTGGGAGCAACAAT+GGG | 0.558774 | tig0026340:-18411 | Msa1428370:CDS |
| GAGGCAACTGAGATGTTACT+AGG | 0.559498 | tig0026340:-16297 | Msa1428370:CDS |
| TTCACGTCACAAACTCCAGA+TGG | 0.562555 | tig0026340:-15770 | Msa1428370:CDS |
| ACATAGAGACTACAGGACAT+TGG | 0.563249 | tig0026340:-17687 | Msa1428370:CDS |
| TCTACCACGACGGTATTCAA+GGG | 0.569386 | tig0026340:-17486 | Msa1428370:CDS |
| AGCTGGTATTGTTTCTGATG+AGG | 0.570990 | tig0026340:-16316 | Msa1428370:CDS |
| ATAAAAGTAGCCATAAATTG+AGG | 0.571302 | tig0026340:+17756 | None:intergenic |
| TGGTATTTAGGGAGAACACT+GGG | 0.579509 | tig0026340:-18423 | Msa1428370:intron |
| AGTGGCTTTCGCAGGAGTGG+AGG | 0.583063 | tig0026340:-19189 | Msa1428370:CDS |
| ATTTCAAATACAATCAATTG+GGG | 0.584684 | tig0026340:-17515 | Msa1428370:CDS |
| CACCAAGTGTTGGTAATGCA+GGG | 0.586553 | tig0026340:+17824 | None:intergenic |
| ATCAACAATGCATAGGAGAG+TGG | 0.587840 | tig0026340:+20403 | None:intergenic |
| CCTATTTGTTCACAACGATG+TGG | 0.590990 | tig0026340:+17934 | None:intergenic |
| TTGGCTTACATAGAGACTAC+AGG | 0.593031 | tig0026340:-17694 | Msa1428370:CDS |
| ACCTAAAGAACAAAGATCCA+AGG | 0.596150 | tig0026340:-17779 | Msa1428370:CDS |
| AATGCTGTCATGCTTGAAGG+AGG | 0.601186 | tig0026340:+16087 | None:intergenic |
| GAATCAAGGACTGGTTGCAG+TGG | 0.604901 | tig0026340:-19207 | Msa1428370:CDS |
| ATTGAAACAAACTAATGTTG+AGG | 0.605351 | tig0026340:-19138 | Msa1428370:CDS |
| GCATTGTTGATAAGAATGGA+TGG | 0.609229 | tig0026340:-20391 | Msa1428370:exon |
| AATTGATCAGCACCAAGTGT+TGG | 0.613285 | tig0026340:+17814 | None:intergenic |
| CGTACCTGAGGCCATTTGCA+TGG | 0.614860 | tig0026340:+17437 | None:intergenic |
| TTGGTATTTAGGGAGAACAC+TGG | 0.615792 | tig0026340:-18424 | Msa1428370:intron |
| TGTTGAGCAAGGTTCTACAA+TGG | 0.616288 | tig0026340:-16136 | Msa1428370:CDS |
| CATTCTTATCAACAATGCAT+AGG | 0.617280 | tig0026340:+20396 | None:intergenic |
| GTTGGAATATAATGCAAGTG+AGG | 0.617388 | tig0026340:+19027 | None:intergenic |
| ATTCCTAAAAGCATATATTG+TGG | 0.634005 | tig0026340:+15830 | None:intergenic |
| TGTGACAGTGAATCAAGGAC+TGG | 0.636123 | tig0026340:-19216 | Msa1428370:intron |
| ATGCTGTCATGCTTGAAGGA+GGG | 0.636585 | tig0026340:+16088 | None:intergenic |
| TGATTTGATAGAATGACAAG+TGG | 0.637516 | tig0026340:-15477 | Msa1428370:intron |
| CTACCACGACGGTATTCAAG+GGG | 0.649839 | tig0026340:-17485 | Msa1428370:CDS |
| ACCGACATAGCAACCAAGTG+CGG | 0.651651 | tig0026340:+15709 | None:intergenic |
| TCAAGTGGTCAAGGACAACA+TGG | 0.658509 | tig0026340:-15653 | Msa1428370:CDS |
| CAGTCTAACACAAAGCGAAG+CGG | 0.661953 | tig0026340:-16241 | Msa1428370:CDS |
| TGGTGCTGATCAATTTGATG+AGG | 0.664130 | tig0026340:-17806 | Msa1428370:CDS |
| GGGGAAGATCTCTACCACGA+CGG | 0.678245 | tig0026340:-17496 | Msa1428370:CDS |
| CAATTGTATGAAAACACTAG+AGG | 0.679956 | tig0026340:+16170 | None:intergenic |
| CATCCCCTTGAATACCGTCG+TGG | 0.715336 | tig0026340:+17482 | None:intergenic |
| ATAGATACCTAACAACAATG+TGG | 0.757923 | tig0026340:+20131 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTAATTGATTTGTA+AGG | - | tig0026340:15714-15733 | Msa1428370:CDS | 10.0% |
| !! | TAAATCATAAATATAAAGAA+GGG | + | tig0026340:15872-15891 | None:intergenic | 10.0% |
| !! | ATAAATCATAAATATAAAGA+AGG | + | tig0026340:15873-15892 | None:intergenic | 10.0% |
| !! | AACAAAGTCTTTATATAAAT+AGG | + | tig0026340:16147-16166 | None:intergenic | 15.0% |
| !!! | AATTTCATTTTCTTCAAAAA+GGG | + | tig0026340:18438-18457 | None:intergenic | 15.0% |
| !!! | AAATTTCATTTTCTTCAAAA+AGG | + | tig0026340:18439-18458 | None:intergenic | 15.0% |
| !! | AAATTTCAAATACAATCAAT+TGG | - | tig0026340:18453-18472 | Msa1428370:intron | 15.0% |
| !! | AATTTCAAATACAATCAATT+GGG | - | tig0026340:18454-18473 | Msa1428370:intron | 15.0% |
| !! | ATTAAATTAAAACAAGTACA+AGG | - | tig0026340:18615-18634 | Msa1428370:intron | 15.0% |
| !! | TTAAATTAAAACAAGTACAA+GGG | - | tig0026340:18616-18635 | Msa1428370:intron | 15.0% |
| !! | AAATCAACTCTATAAATATA+GGG | + | tig0026340:19428-19447 | None:intergenic | 15.0% |
| !! | CAAAATGAATAAAGAAAATT+TGG | + | tig0026340:19606-19625 | None:intergenic | 15.0% |
| !!! | TTTCTTTATTCATTTTGTTT+CGG | - | tig0026340:19609-19628 | Msa1428370:intron | 15.0% |
| !!! | TTATTATATATCTTCCGTTT+TGG | - | tig0026340:15974-15993 | Msa1428370:intron | 20.0% |
| !! | TTAGCTTATGCAAATAAATA+AGG | + | tig0026340:16312-16331 | None:intergenic | 20.0% |
| !! | AAAAAATAAGTCAATCCAAA+TGG | - | tig0026340:16330-16349 | Msa1428370:CDS | 20.0% |
| !! | AAAAATAAGTCAATCCAAAT+GGG | - | tig0026340:16331-16350 | Msa1428370:CDS | 20.0% |
| !! | TATATAAGCTACTTGAATTA+TGG | + | tig0026340:16357-16376 | None:intergenic | 20.0% |
| !!! | TGTTTTCAATTAAGATTACA+AGG | + | tig0026340:16419-16438 | None:intergenic | 20.0% |
| !!! | GTTATTTTAGATTACTCTTT+AGG | - | tig0026340:17146-17165 | Msa1428370:intron | 20.0% |
| !!! | TCGTATTTTAATTAGATAAC+AGG | + | tig0026340:17214-17233 | None:intergenic | 20.0% |
| !! | TCTAATTAAAATACGATAAG+TGG | - | tig0026340:17218-17237 | Msa1428370:intron | 20.0% |
| !!! | TGAATTTTATAACAAAGGAT+AGG | + | tig0026340:17451-17470 | None:intergenic | 20.0% |
| !!! | TGCAATGAATTTTATAACAA+AGG | + | tig0026340:17456-17475 | None:intergenic | 20.0% |
| !! | ATTAAGTTATTGATCCTATT+AGG | + | tig0026340:17481-17500 | None:intergenic | 20.0% |
| !! | ATAGGATCAATAACTTAATT+AGG | - | tig0026340:17482-17501 | Msa1428370:CDS | 20.0% |
| !!! | TGTTAATGAATAATACCTTT+TGG | - | tig0026340:17512-17531 | Msa1428370:CDS | 20.0% |
| !! | TATATTGATAGGTAAAAAAG+TGG | + | tig0026340:18096-18115 | None:intergenic | 20.0% |
| !! | ATTTCAAATACAATCAATTG+GGG | - | tig0026340:18455-18474 | Msa1428370:intron | 20.0% |
| !! | TAAATTAAAACAAGTACAAG+GGG | - | tig0026340:18617-18636 | Msa1428370:intron | 20.0% |
| !!! | TTTTTTGTGAGAAAAAGTTT+AGG | + | tig0026340:18817-18836 | None:intergenic | 20.0% |
| !!! | TTGAAATTGGTTTACTATTA+CGG | + | tig0026340:18948-18967 | None:intergenic | 20.0% |
| !! | CAAATCAACTCTATAAATAT+AGG | + | tig0026340:19429-19448 | None:intergenic | 20.0% |
| !!! | GACTACTTTTTTTTAGTTAA+AGG | - | tig0026340:19531-19550 | Msa1428370:intron | 20.0% |
| !!! | AATTCCATTTGTATGATTTT+TGG | + | tig0026340:19705-19724 | None:intergenic | 20.0% |
| !! | TCATCACTTTAATATACAAT+GGG | + | tig0026340:19960-19979 | None:intergenic | 20.0% |
| !! | TTCATCACTTTAATATACAA+TGG | + | tig0026340:19961-19980 | None:intergenic | 20.0% |
| !! | GTAAATAAAATTACATCAAG+TGG | - | tig0026340:20302-20321 | Msa1428370:intron | 20.0% |
| !!! | CTTTCTTTCTTTGTTTTGAA+AGG | + | tig0026340:15484-15503 | None:intergenic | 25.0% |
| ! | CATATATACGCTAATTTATG+CGG | - | tig0026340:15652-15671 | Msa1428370:CDS | 25.0% |
| ! | ATATATACGCTAATTTATGC+GGG | - | tig0026340:15653-15672 | Msa1428370:CDS | 25.0% |
| !! | TAAATATAAAGAAGGGTATG+TGG | + | tig0026340:15865-15884 | None:intergenic | 25.0% |
| !!! | TATCGATGTTTTTTCGATTA+CGG | - | tig0026340:15890-15909 | Msa1428370:CDS | 25.0% |
| !!! | TATAAAGACTTTGTTTTGCA+AGG | - | tig0026340:16152-16171 | Msa1428370:CDS | 25.0% |
| ! | CATTATTCATAAGTTTGTCA+AGG | + | tig0026340:16282-16301 | None:intergenic | 25.0% |
| ! | ACTTATAAGCTAACTTATAG+CGG | + | tig0026340:16520-16539 | None:intergenic | 25.0% |
| !! | ATTAGCTATTCTAGAAAGTT+TGG | + | tig0026340:16569-16588 | None:intergenic | 25.0% |
| !! | TCATAGATATAGGTATTGTT+TGG | + | tig0026340:16687-16706 | None:intergenic | 25.0% |
| ! | ATCGATATAGTCATAGATAT+AGG | + | tig0026340:16697-16716 | None:intergenic | 25.0% |
| ! | ATTGAAACAAACTAATGTTG+AGG | - | tig0026340:16832-16851 | Msa1428370:intron | 25.0% |
| !! | ACCTATTTCTTCTCTTTAAT+TGG | - | tig0026340:16887-16906 | Msa1428370:intron | 25.0% |
| ! | TCCAATTAAAGAGAAGAAAT+AGG | + | tig0026340:16891-16910 | None:intergenic | 25.0% |
| ! | ATCATAGTAAGTAATCAACA+TGG | - | tig0026340:16974-16993 | Msa1428370:intron | 25.0% |
| ! | AAATTCATTGCAAACCTAAT+AGG | - | tig0026340:17464-17483 | Msa1428370:CDS | 25.0% |
| !! | ATGGGTTAATCAAAATTTCA+AGG | - | tig0026340:17577-17596 | Msa1428370:CDS | 25.0% |
| !!! | ATTTCAAGGTATTGAGTATA+CGG | - | tig0026340:17591-17610 | Msa1428370:CDS | 25.0% |
| ! | GAAACTCATATTGAGTATAT+GGG | - | tig0026340:17822-17841 | Msa1428370:CDS | 25.0% |
| ! | AAATGACAGAATTATAAGAG+AGG | + | tig0026340:17851-17870 | None:intergenic | 25.0% |
| !! | CTTTGCTTTCATTTTATGTA+GGG | - | tig0026340:17970-17989 | Msa1428370:CDS | 25.0% |
| !! | TTTGCTTTCATTTTATGTAG+GGG | - | tig0026340:17971-17990 | Msa1428370:CDS | 25.0% |
| ! | GAGCTATTAGATATATTGAT+AGG | + | tig0026340:18107-18126 | None:intergenic | 25.0% |
| ! | TCAATATATCTAATAGCTCT+AGG | - | tig0026340:18108-18127 | Msa1428370:intron | 25.0% |
| ! | ATAAAAGTAGCCATAAATTG+AGG | + | tig0026340:18217-18236 | None:intergenic | 25.0% |
| !!! | AATTTATGGCTACTTTTATG+TGG | - | tig0026340:18218-18237 | Msa1428370:intron | 25.0% |
| ! | AAAAGTTCAAGAAAACTTCA+AGG | - | tig0026340:18898-18917 | Msa1428370:intron | 25.0% |
| !!! | CATCAAAGCTTTTTTGAAAT+TGG | + | tig0026340:18961-18980 | None:intergenic | 25.0% |
| !!! | TGAGTTCTTTGAGTATTTTT+TGG | - | tig0026340:20111-20130 | Msa1428370:intron | 25.0% |
| !! | ATACCACAATATATGCTTTT+AGG | - | tig0026340:20137-20156 | Msa1428370:intron | 25.0% |
| !! | ATTCCTAAAAGCATATATTG+TGG | + | tig0026340:20143-20162 | None:intergenic | 25.0% |
| ! | AAATGACCATCATTTAGATT+AGG | + | tig0026340:20353-20372 | None:intergenic | 25.0% |
| ! | TAAATGATGGTCATTTAGAT+AGG | - | tig0026340:20357-20376 | Msa1428370:intron | 25.0% |
| !!! | TCTTTGTTTTGAAAGGATAG+AGG | + | tig0026340:15477-15496 | None:intergenic | 30.0% |
| ! | AGGTAGGTTTTACATATACA+CGG | + | tig0026340:15538-15557 | None:intergenic | 30.0% |
| CATTCTTATCAACAATGCAT+AGG | + | tig0026340:15577-15596 | None:intergenic | 30.0% | |
| ! | CTATGCATTGTTGATAAGAA+TGG | - | tig0026340:15575-15594 | Msa1428370:CDS | 30.0% |
| GTATATATGGTGAATCGAAT+TGG | + | tig0026340:15641-15660 | None:intergenic | 30.0% | |
| CGCATAAATTAGCGTATATA+TGG | + | tig0026340:15654-15673 | None:intergenic | 30.0% | |
| ATCAATTCCTGTACAAAAGA+TGG | - | tig0026340:15757-15776 | Msa1428370:CDS | 30.0% | |
| TCAATTCCTGTACAAAAGAT+GGG | - | tig0026340:15758-15777 | Msa1428370:CDS | 30.0% | |
| TGAAAAATAGTTCAGGTAGA+TGG | - | tig0026340:15809-15828 | Msa1428370:CDS | 30.0% | |
| ATAGATACCTAACAACAATG+TGG | + | tig0026340:15842-15861 | None:intergenic | 30.0% | |
| !!! | ATCGATGTTTTTTCGATTAC+GGG | - | tig0026340:15891-15910 | Msa1428370:CDS | 30.0% |
| GTTTCATCTATCTACCAAAA+CGG | + | tig0026340:15991-16010 | None:intergenic | 30.0% | |
| GCAAAAATGTCGAAATTGTT+AGG | + | tig0026340:16093-16112 | None:intergenic | 30.0% | |
| GTTGAACTAGCGTATAAATA+AGG | + | tig0026340:16454-16473 | None:intergenic | 30.0% | |
| CTCTGTTTGGTAAAAAACAA+CGG | + | tig0026340:16546-16565 | None:intergenic | 30.0% | |
| TAAATTGTGACAGTGAATCA+AGG | - | tig0026340:16749-16768 | Msa1428370:intron | 30.0% | |
| ! | AAACACTTTTAGCATATGGA+TGG | - | tig0026340:16859-16878 | Msa1428370:intron | 30.0% |
| ! | AACACTTTTAGCATATGGAT+GGG | - | tig0026340:16860-16879 | Msa1428370:intron | 30.0% |
| TTACTATGATGAACACAAGT+TGG | + | tig0026340:16964-16983 | None:intergenic | 30.0% | |
| TCTTTCGTTAACAGAAGTTT+AGG | - | tig0026340:17072-17091 | Msa1428370:intron | 30.0% | |
| ACTTTGATTAGAAATGTCAG+TGG | - | tig0026340:17263-17282 | Msa1428370:intron | 30.0% | |
| TGTTGTTGTGTTTGGTATTT+AGG | - | tig0026340:17535-17554 | Msa1428370:CDS | 30.0% | |
| GTTGTTGTGTTTGGTATTTA+GGG | - | tig0026340:17536-17555 | Msa1428370:CDS | 30.0% | |
| !! | TTTCAAGGTATTGAGTATAC+GGG | - | tig0026340:17592-17611 | Msa1428370:CDS | 30.0% |
| AAAAGAGGATAAAGTGATGT+AGG | + | tig0026340:17682-17701 | None:intergenic | 30.0% | |
| ATCATAACATGCTAACGATT+AGG | - | tig0026340:17766-17785 | Msa1428370:CDS | 30.0% | |
| CGAAACTCATATTGAGTATA+TGG | - | tig0026340:17821-17840 | Msa1428370:CDS | 30.0% | |
| TCATGAAATTAAAGTGTGAG+TGG | + | tig0026340:17902-17921 | None:intergenic | 30.0% | |
| GCAAAGGAAAATAGAACTTT+AGG | + | tig0026340:17956-17975 | None:intergenic | 30.0% | |
| CCTACATAAAATGAAAGCAA+AGG | + | tig0026340:17972-17991 | None:intergenic | 30.0% | |
| ! | CCTTTGCTTTCATTTTATGT+AGG | - | tig0026340:17969-17988 | Msa1428370:CDS | 30.0% |
| !! | TTTTATGTGGCATTGAACTT+GGG | - | tig0026340:18231-18250 | Msa1428370:intron | 30.0% |
| !!! | TCATTTCTTGTTTTGTTGAG+TGG | - | tig0026340:18345-18364 | Msa1428370:intron | 30.0% |
| ! | TACAGACACTATAAGACTTT+TGG | - | tig0026340:18378-18397 | Msa1428370:intron | 30.0% |
| GTTGTGAAAACTTAGAGAAA+GGG | + | tig0026340:18407-18426 | None:intergenic | 30.0% | |
| AGTTGTGAAAACTTAGAGAA+AGG | + | tig0026340:18408-18427 | None:intergenic | 30.0% | |
| TTTGTGAGAAAAAGTTTAGG+CGG | + | tig0026340:18814-18833 | None:intergenic | 30.0% | |
| ! | ATATTCCTAAGCCTTGATTT+TGG | - | tig0026340:19049-19068 | Msa1428370:CDS | 30.0% |
| CTATACTTGATCAAAACACT+AGG | + | tig0026340:19207-19226 | None:intergenic | 30.0% | |
| AACTCATTCATAGTCAATGT+AGG | + | tig0026340:19287-19306 | None:intergenic | 30.0% | |
| AATGAGTTCACTGTTAACAA+AGG | - | tig0026340:19299-19318 | Msa1428370:intron | 30.0% | |
| ATCCAAAATCTTAGAGCTTT+GGG | + | tig0026340:19341-19360 | None:intergenic | 30.0% | |
| CTGTTATATAACAGTGAACT+CGG | + | tig0026340:19381-19400 | None:intergenic | 30.0% | |
| AAGGCCAAAAATCATACAAA+TGG | - | tig0026340:19698-19717 | Msa1428370:intron | 30.0% | |
| !!! | TTTTGAGAGTGTTACCAATA+TGG | - | tig0026340:19761-19780 | Msa1428370:intron | 30.0% |
| AAGATTGTGCAAAACCATAT+TGG | + | tig0026340:19778-19797 | None:intergenic | 30.0% | |
| CAATTGTATGAAAACACTAG+AGG | + | tig0026340:19803-19822 | None:intergenic | 30.0% | |
| GATGAAAATACTTTGTAGCT+CGG | + | tig0026340:20004-20023 | None:intergenic | 30.0% | |
| !! | GAGCTACAAAGTATTTTCAT+CGG | - | tig0026340:20003-20022 | Msa1428370:intron | 30.0% |
| ! | AATCATACATTGATTGTTGC+TGG | - | tig0026340:20038-20057 | Msa1428370:intron | 30.0% |
| AAAATTACATCAAGTGGTCA+AGG | - | tig0026340:20308-20327 | Msa1428370:intron | 30.0% | |
| GTTTCACCTAATCTAAATGA+TGG | - | tig0026340:20344-20363 | Msa1428370:intron | 30.0% | |
| ! | TTATATGCCCTTGTATCTTT+TGG | + | tig0026340:20441-20460 | None:intergenic | 30.0% |
| ! | AAGATACAAGGGCATATAAT+TGG | - | tig0026340:20442-20461 | Msa1428370:five_prime_UTR | 30.0% |
| AATTGGAGAAAAGAGAAGAT+AGG | - | tig0026340:20459-20478 | Msa1428370:five_prime_UTR | 30.0% | |
| TGATTTGATAGAATGACAAG+TGG | - | tig0026340:20493-20512 | Msa1428370:five_prime_UTR | 30.0% | |
| !! | ATTTTTACAGAGCATCAAGA+AGG | - | tig0026340:20536-20555 | Msa1428370:five_prime_UTR | 30.0% |
| !! | AAATCTACTGGTTCGTATGT+TGG | + | tig0026340:15439-15458 | None:intergenic | 35.0% |
| ACATACGAACCAGTAGATTT+AGG | - | tig0026340:15439-15458 | Msa1428370:CDS | 35.0% | |
| CATACGAACCAGTAGATTTA+GGG | - | tig0026340:15440-15459 | Msa1428370:CDS | 35.0% | |
| AGAGTGGTTTATAAGAAGGT+AGG | + | tig0026340:15554-15573 | None:intergenic | 35.0% | |
| TAGGAGAGTGGTTTATAAGA+AGG | + | tig0026340:15558-15577 | None:intergenic | 35.0% | |
| ! | GCATTGTTGATAAGAATGGA+TGG | - | tig0026340:15579-15598 | Msa1428370:CDS | 35.0% |
| TTGTAAGGTTGTTGAAGAAG+AGG | - | tig0026340:15729-15748 | Msa1428370:CDS | 35.0% | |
| TGTAAGGTTGTTGAAGAAGA+GGG | - | tig0026340:15730-15749 | Msa1428370:CDS | 35.0% | |
| !! | GATGGGTCAGTTGATTTTTA+TGG | - | tig0026340:15775-15794 | Msa1428370:CDS | 35.0% |
| !! | CCTGAACTATTTTTCAAAGC+TGG | + | tig0026340:15805-15824 | None:intergenic | 35.0% |
| !! | CCAGCTTTGAAAAATAGTTC+AGG | - | tig0026340:15802-15821 | Msa1428370:CDS | 35.0% |
| TTAAAACTCACACACACAAG+TGG | - | tig0026340:16030-16049 | Msa1428370:CDS | 35.0% | |
| ! | ACATTTTTGCCAATTGAGCT+AGG | - | tig0026340:16103-16122 | Msa1428370:CDS | 35.0% |
| TACTTGAATTATGGCCCATT+TGG | + | tig0026340:16348-16367 | None:intergenic | 35.0% | |
| ! | CAGCAAACACTTTTAGCATA+TGG | - | tig0026340:16855-16874 | Msa1428370:intron | 35.0% |
| TTTCTCAGTGACTCATATCT+AGG | - | tig0026340:16914-16933 | Msa1428370:intron | 35.0% | |
| GTTGGAATATAATGCAAGTG+AGG | + | tig0026340:16946-16965 | None:intergenic | 35.0% | |
| TTCGTTAACAGAAGTTTAGG+AGG | - | tig0026340:17075-17094 | Msa1428370:intron | 35.0% | |
| TATCTAAACTTGTGATGTGC+AGG | + | tig0026340:17113-17132 | None:intergenic | 35.0% | |
| ! | TAGGACAAATTTTATGCCAG+TGG | - | tig0026340:17165-17184 | Msa1428370:intron | 35.0% |
| TATTCCAGAGAGTTGAGTAA+GGG | + | tig0026340:17355-17374 | None:intergenic | 35.0% | |
| ATATTCCAGAGAGTTGAGTA+AGG | + | tig0026340:17356-17375 | None:intergenic | 35.0% | |
| !! | TTCAAGGTATTGAGTATACG+GGG | - | tig0026340:17593-17612 | Msa1428370:CDS | 35.0% |
| !! | TAGTCTTGATTCGGTTTGAT+GGG | + | tig0026340:17709-17728 | None:intergenic | 35.0% |
| !! | ATAGTCTTGATTCGGTTTGA+TGG | + | tig0026340:17710-17729 | None:intergenic | 35.0% |
| ! | GTGGTATGATAGTCTTGATT+CGG | + | tig0026340:17718-17737 | None:intergenic | 35.0% |
| TCGTTAGCATGTTATGATTC+TGG | + | tig0026340:17764-17783 | None:intergenic | 35.0% | |
| TGCTAACGATTAGGACAATT+AGG | - | tig0026340:17775-17794 | Msa1428370:CDS | 35.0% | |
| TATGAGTTTCGATAGAGATG+TGG | + | tig0026340:17812-17831 | None:intergenic | 35.0% | |
| ! | TCATTTTATGTAGGGGTTGA+TGG | - | tig0026340:17978-17997 | Msa1428370:CDS | 35.0% |
| !! | TATCTAATAGCTCTAGGAAG+TGG | - | tig0026340:18114-18133 | Msa1428370:intron | 35.0% |
| ACCTAAAGAACAAAGATCCA+AGG | - | tig0026340:18191-18210 | Msa1428370:intron | 35.0% | |
| !! | CTTTTATGTGGCATTGAACT+TGG | - | tig0026340:18230-18249 | Msa1428370:intron | 35.0% |
| ATTGGTTGCTGAGACTATAT+TGG | - | tig0026340:18257-18276 | Msa1428370:intron | 35.0% | |
| AGAAGAATACACCATGCAAA+TGG | - | tig0026340:18522-18541 | Msa1428370:intron | 35.0% | |
| AAGTTCTCACATTGGCATAT+GGG | + | tig0026340:18706-18725 | None:intergenic | 35.0% | |
| ! | TCAATGCTATTTGAGCATTG+AGG | - | tig0026340:18752-18771 | Msa1428370:intron | 35.0% |
| TTGTGAGAAAAAGTTTAGGC+GGG | + | tig0026340:18813-18832 | None:intergenic | 35.0% | |
| ! | TACGGTTAATAGCTTGTATG+AGG | + | tig0026340:18930-18949 | None:intergenic | 35.0% |
| TCAAATCTCCACCAAAATCA+AGG | + | tig0026340:19063-19082 | None:intergenic | 35.0% | |
| ATCAAAATCACCAAAAGACC+TGG | + | tig0026340:19089-19108 | None:intergenic | 35.0% | |
| TGATGTGATATTCACACTTG+AGG | - | tig0026340:19227-19246 | Msa1428370:intron | 35.0% | |
| GATGTGATATTCACACTTGA+GGG | - | tig0026340:19228-19247 | Msa1428370:intron | 35.0% | |
| !! | TCTTAGAGCTTTGGGAATAT+GGG | + | tig0026340:19333-19352 | None:intergenic | 35.0% |
| !! | ATCTTAGAGCTTTGGGAATA+TGG | + | tig0026340:19334-19353 | None:intergenic | 35.0% |
| !!! | TTCCCAAAGCTCTAAGATTT+TGG | - | tig0026340:19336-19355 | Msa1428370:intron | 35.0% |
| CATCCAAAATCTTAGAGCTT+TGG | + | tig0026340:19342-19361 | None:intergenic | 35.0% | |
| TTATATAACAGTGAACTCGG+CGG | + | tig0026340:19378-19397 | None:intergenic | 35.0% | |
| TATGGCTAACAAGAATGGAA+TGG | + | tig0026340:19481-19500 | None:intergenic | 35.0% | |
| GATTGTATGGCTAACAAGAA+TGG | + | tig0026340:19486-19505 | None:intergenic | 35.0% | |
| ACAACTTGCAACAGATTGTA+TGG | + | tig0026340:19499-19518 | None:intergenic | 35.0% | |
| AGTTAAAGGATACAAACACG+AGG | - | tig0026340:19545-19564 | Msa1428370:intron | 35.0% | |
| !! | ATTTTGTTTCGGTGACATAC+AGG | - | tig0026340:19620-19639 | Msa1428370:intron | 35.0% |
| !!! | TACAGGTTTTTTGATAGAGC+TGG | - | tig0026340:19637-19656 | Msa1428370:intron | 35.0% |
| ACTGAGATGTTACTAGGTAA+AGG | - | tig0026340:19679-19698 | Msa1428370:intron | 35.0% | |
| ! | CTTTCTCTATTTGTTGAGCA+AGG | - | tig0026340:19823-19842 | Msa1428370:intron | 35.0% |
| AAAATACTTTGTAGCTCGGT+AGG | + | tig0026340:20000-20019 | None:intergenic | 35.0% | |
| ! | TTAAGTTTTGCCAGCAATGA+TGG | - | tig0026340:20080-20099 | Msa1428370:intron | 35.0% |
| TGTATGTGCCAAAAGATACA+AGG | - | tig0026340:20430-20449 | Msa1428370:five_prime_UTR | 35.0% | |
| GTATGTGCCAAAAGATACAA+GGG | - | tig0026340:20431-20450 | Msa1428370:five_prime_UTR | 35.0% | |
| !! | TACTGGTTCGTATGTTGGTT+TGG | + | tig0026340:15434-15453 | None:intergenic | 40.0% |
| ATCAACAATGCATAGGAGAG+TGG | + | tig0026340:15570-15589 | None:intergenic | 40.0% | |
| CGAACAAAATTTAGCGTCAC+AGG | - | tig0026340:15605-15624 | Msa1428370:CDS | 40.0% | |
| GTAAGGTTGTTGAAGAAGAG+GGG | - | tig0026340:15731-15750 | Msa1428370:CDS | 40.0% | |
| ! | AACTGACCCATCTTTTGTAC+AGG | + | tig0026340:15767-15786 | None:intergenic | 40.0% |
| !! | AGAAGTGCCACATTGTTGTT+AGG | - | tig0026340:15832-15851 | Msa1428370:CDS | 40.0% |
| ! | TTTTCGATTACGGGTCTGTT+TGG | - | tig0026340:15900-15919 | Msa1428370:CDS | 40.0% |
| TTCGAGCACTTAAGAGATTG+CGG | - | tig0026340:15932-15951 | Msa1428370:intron | 40.0% | |
| TTAAGAGATTGCGGGTTTGT+TGG | - | tig0026340:15941-15960 | Msa1428370:intron | 40.0% | |
| ! | TAAGAGATTGCGGGTTTGTT+GGG | - | tig0026340:15942-15961 | Msa1428370:intron | 40.0% |
| TGAACTCCTGTCACAATGTT+TGG | - | tig0026340:16067-16086 | Msa1428370:CDS | 40.0% | |
| !! | CTAGAAAGTTTGGCTCTGTT+TGG | + | tig0026340:16559-16578 | None:intergenic | 40.0% |
| AACTTGTGATGTGCAGGAAT+GGG | + | tig0026340:17107-17126 | None:intergenic | 40.0% | |
| AAACTTGTGATGTGCAGGAA+TGG | + | tig0026340:17108-17127 | None:intergenic | 40.0% | |
| TTAGTACTCCACTACTCCTT+TGG | - | tig0026340:17326-17345 | Msa1428370:intron | 40.0% | |
| CCAAACACAACAACACCAAA+AGG | + | tig0026340:17530-17549 | None:intergenic | 40.0% | |
| !!! | CCTTTTGGTGTTGTTGTGTT+TGG | - | tig0026340:17527-17546 | Msa1428370:CDS | 40.0% |
| TTGGTATTTAGGGAGAACAC+TGG | - | tig0026340:17546-17565 | Msa1428370:CDS | 40.0% | |
| TGGTATTTAGGGAGAACACT+GGG | - | tig0026340:17547-17566 | Msa1428370:CDS | 40.0% | |
| TAAAGTGATGTAGGAGACTC+AGG | + | tig0026340:17673-17692 | None:intergenic | 40.0% | |
| TCGATAGAGATGTGGTATCA+AGG | + | tig0026340:17804-17823 | None:intergenic | 40.0% | |
| AGTCCATTCCTAGTTGTTGT+AGG | - | tig0026340:17871-17890 | Msa1428370:CDS | 40.0% | |
| AGTCCTACAACAACTAGGAA+TGG | + | tig0026340:17877-17896 | None:intergenic | 40.0% | |
| ! | TGGTTAGTCCTACAACAACT+AGG | + | tig0026340:17882-17901 | None:intergenic | 40.0% |
| CCTATTTGTTCACAACGATG+TGG | + | tig0026340:18039-18058 | None:intergenic | 40.0% | |
| CCACATCGTTGTGAACAAAT+AGG | - | tig0026340:18036-18055 | Msa1428370:intron | 40.0% | |
| AATTGATCAGCACCAAGTGT+TGG | + | tig0026340:18159-18178 | None:intergenic | 40.0% | |
| !! | TGGTGCTGATCAATTTGATG+AGG | - | tig0026340:18164-18183 | Msa1428370:intron | 40.0% |
| GCCTTGGATCTTTGTTCTTT+AGG | + | tig0026340:18195-18214 | None:intergenic | 40.0% | |
| AGATCCAAGGCCTCAATTTA+TGG | - | tig0026340:18204-18223 | Msa1428370:intron | 40.0% | |
| TTGGCTTACATAGAGACTAC+AGG | - | tig0026340:18276-18295 | Msa1428370:intron | 40.0% | |
| ACATAGAGACTACAGGACAT+TGG | - | tig0026340:18283-18302 | Msa1428370:intron | 40.0% | |
| CATAGAGACTACAGGACATT+GGG | - | tig0026340:18284-18303 | Msa1428370:intron | 40.0% | |
| GAAACTAGACCAGTCTACAT+TGG | + | tig0026340:18643-18662 | None:intergenic | 40.0% | |
| !! | TGTAGACTGGTCTAGTTTCT+AGG | - | tig0026340:18644-18663 | Msa1428370:intron | 40.0% |
| !! | GTAGACTGGTCTAGTTTCTA+GGG | - | tig0026340:18645-18664 | Msa1428370:intron | 40.0% |
| GATTCAACTCAGATCTCACA+AGG | - | tig0026340:18667-18686 | Msa1428370:intron | 40.0% | |
| GAAGTTCTCACATTGGCATA+TGG | + | tig0026340:18707-18726 | None:intergenic | 40.0% | |
| TGCCAATGTGAGAACTTCAT+TGG | - | tig0026340:18709-18728 | Msa1428370:intron | 40.0% | |
| AGAAAAAGTTTAGGCGGGAT+GGG | + | tig0026340:18808-18827 | None:intergenic | 40.0% | |
| ! | TTCCTAAGCCTTGATTTTGG+TGG | - | tig0026340:19052-19071 | Msa1428370:CDS | 40.0% |
| ACCCACTTGTTTAGGAGTTT+GGG | + | tig0026340:19141-19160 | None:intergenic | 40.0% | |
| TACCCACTTGTTTAGGAGTT+TGG | + | tig0026340:19142-19161 | None:intergenic | 40.0% | |
| GCTATGATACCCACTTGTTT+AGG | + | tig0026340:19149-19168 | None:intergenic | 40.0% | |
| !! | ATCATAGCCTTGTTTCGACT+TGG | - | tig0026340:19161-19180 | Msa1428370:CDS | 40.0% |
| GTTCACTGTTAACAAAGGTG+AGG | - | tig0026340:19304-19323 | Msa1428370:intron | 40.0% | |
| TATATAACAGTGAACTCGGC+GGG | + | tig0026340:19377-19396 | None:intergenic | 40.0% | |
| !! | AGCTGGTATTGTTTCTGATG+AGG | - | tig0026340:19654-19673 | Msa1428370:intron | 40.0% |
| TGTTGAGCAAGGTTCTACAA+TGG | - | tig0026340:19834-19853 | Msa1428370:intron | 40.0% | |
| TCAAATGCTGTCATGCTTGA+AGG | + | tig0026340:19889-19908 | None:intergenic | 40.0% | |
| CATCTCTTTACCATCATTGC+TGG | + | tig0026340:20093-20112 | None:intergenic | 40.0% | |
| ! | TCTATGTTTTCATCCGCACT+TGG | - | tig0026340:20248-20267 | Msa1428370:intron | 40.0% |
| ! | CGGTAACATTTTTCTGACTG+TGG | - | tig0026340:20280-20299 | Msa1428370:intron | 40.0% |
| GATAGAATGACAAGTGGAGT+TGG | - | tig0026340:20499-20518 | Msa1428370:five_prime_UTR | 40.0% | |
| !! | CGTATGTTGGTTTGGTTGGT+AGG | + | tig0026340:15426-15445 | None:intergenic | 45.0% |
| !! | GGTTCGTATGTTGGTTTGGT+TGG | + | tig0026340:15430-15449 | None:intergenic | 45.0% |
| AGAAGACGCCCTAAATCTAC+TGG | + | tig0026340:15451-15470 | None:intergenic | 45.0% | |
| TCGAGCACTTAAGAGATTGC+GGG | - | tig0026340:15933-15952 | Msa1428370:intron | 45.0% | |
| GTTAGGCCAAACATTGTGAC+AGG | + | tig0026340:16076-16095 | None:intergenic | 45.0% | |
| TCTGCATGTCCTAGCTCAAT+TGG | + | tig0026340:16115-16134 | None:intergenic | 45.0% | |
| TGTGACAGTGAATCAAGGAC+TGG | - | tig0026340:16754-16773 | Msa1428370:intron | 45.0% | |
| ACTTGTGATGTGCAGGAATG+GGG | + | tig0026340:17106-17125 | None:intergenic | 45.0% | |
| GAGGTGGAGAGTTCAAAACT+TGG | + | tig0026340:17302-17321 | None:intergenic | 45.0% | |
| ! | GTAGTGGAGTACTAATGAGG+AGG | + | tig0026340:17321-17340 | None:intergenic | 45.0% |
| ! | GGAGTAGTGGAGTACTAATG+AGG | + | tig0026340:17324-17343 | None:intergenic | 45.0% |
| AGTTGAGTAAGGGACACCAA+AGG | + | tig0026340:17345-17364 | None:intergenic | 45.0% | |
| AGAACACTGGGAGCAACAAT+GGG | - | tig0026340:17559-17578 | Msa1428370:CDS | 45.0% | |
| GGTTGACATTCAAGTGTGAG+TGG | + | tig0026340:17636-17655 | None:intergenic | 45.0% | |
| GATGTAGGAGACTCAGGATT+GGG | + | tig0026340:17667-17686 | None:intergenic | 45.0% | |
| TGATGTAGGAGACTCAGGAT+TGG | + | tig0026340:17668-17687 | None:intergenic | 45.0% | |
| ! | GGTTTGATGGGTAGCAAAAG+AGG | + | tig0026340:17697-17716 | None:intergenic | 45.0% |
| CGCTAAAACTCTGCAACAAG+TGG | + | tig0026340:17737-17756 | None:intergenic | 45.0% | |
| !! | CACCAAGTGTTGGTAATGCA+GGG | + | tig0026340:18149-18168 | None:intergenic | 45.0% |
| GTAGCCATAAATTGAGGCCT+TGG | + | tig0026340:18211-18230 | None:intergenic | 45.0% | |
| ! | GGCATTGAACTTGGGATCAT+TGG | - | tig0026340:18239-18258 | Msa1428370:intron | 45.0% |
| TCTACCACGACGGTATTCAA+GGG | - | tig0026340:18484-18503 | Msa1428370:intron | 45.0% | |
| GTTCTTAAGAGACGTACCTG+AGG | + | tig0026340:18548-18567 | None:intergenic | 45.0% | |
| ACTCAGATCTCACAAGGATC+TGG | - | tig0026340:18673-18692 | Msa1428370:intron | 45.0% | |
| CTCAGATCTCACAAGGATCT+GGG | - | tig0026340:18674-18693 | Msa1428370:intron | 45.0% | |
| CGCCAATGAAGTTCTCACAT+TGG | + | tig0026340:18714-18733 | None:intergenic | 45.0% | |
| GAAAAAGTTTAGGCGGGATG+GGG | + | tig0026340:18807-18826 | None:intergenic | 45.0% | |
| GAGAAAAAGTTTAGGCGGGA+TGG | + | tig0026340:18809-18828 | None:intergenic | 45.0% | |
| CTCCACCAAAATCAAGGCTT+AGG | + | tig0026340:19057-19076 | None:intergenic | 45.0% | |
| ! | GATTTGACGTCCAGGTCTTT+TGG | - | tig0026340:19076-19095 | Msa1428370:CDS | 45.0% |
| CCACTTGTTTAGGAGTTTGG+GGG | + | tig0026340:19139-19158 | None:intergenic | 45.0% | |
| CCCACTTGTTTAGGAGTTTG+GGG | + | tig0026340:19140-19159 | None:intergenic | 45.0% | |
| CCCCAAACTCCTAAACAAGT+GGG | - | tig0026340:19137-19156 | Msa1428370:CDS | 45.0% | |
| TCTCACACCAAGTCGAAACA+AGG | + | tig0026340:19171-19190 | None:intergenic | 45.0% | |
| GAGGCAACTGAGATGTTACT+AGG | - | tig0026340:19673-19692 | Msa1428370:intron | 45.0% | |
| CAGTCTAACACAAAGCGAAG+CGG | - | tig0026340:19729-19748 | Msa1428370:intron | 45.0% | |
| ATGCTGTCATGCTTGAAGGA+GGG | + | tig0026340:19885-19904 | None:intergenic | 45.0% | |
| AATGCTGTCATGCTTGAAGG+AGG | + | tig0026340:19886-19905 | None:intergenic | 45.0% | |
| ! | TGTAGCTCGGTAGGAAGTTT+TGG | + | tig0026340:19991-20010 | None:intergenic | 45.0% |
| TTCACGTCACAAACTCCAGA+TGG | - | tig0026340:20200-20219 | Msa1428370:CDS | 45.0% | |
| GTCACAAACTCCAGATGGTT+TGG | - | tig0026340:20205-20224 | Msa1428370:CDS | 45.0% | |
| ! | TCCAGATGGTTTGGAAAGCT+TGG | - | tig0026340:20214-20233 | Msa1428370:CDS | 45.0% |
| ! | CCAGATGGTTTGGAAAGCTT+GGG | - | tig0026340:20215-20234 | Msa1428370:CDS | 45.0% |
| ! | TGGTTTGGAAAGCTTGGGAA+TGG | - | tig0026340:20220-20239 | Msa1428370:CDS | 45.0% |
| GGTTTGGAAAGCTTGGGAAT+GGG | - | tig0026340:20221-20240 | Msa1428370:CDS | 45.0% | |
| GTTTGGAAAGCTTGGGAATG+GGG | - | tig0026340:20222-20241 | Msa1428370:CDS | 45.0% | |
| TCAAGTGGTCAAGGACAACA+TGG | - | tig0026340:20317-20336 | Msa1428370:intron | 45.0% | |
| TGGTCAAGGACAACATGGTT+GGG | - | tig0026340:20322-20341 | Msa1428370:intron | 45.0% | |
| CAAGAAGGATGTCCTGACTT+TGG | - | tig0026340:20551-20570 | Msa1428370:five_prime_UTR | 45.0% | |
| !!! | TTTAAAGAATTTTTTTTATA+AGG | + | tig0026340:19577-19596 | None:intergenic | 5.0% |
| GTGACAGGAGTTCAAACCTC+CGG | + | tig0026340:16061-16080 | None:intergenic | 50.0% | |
| !! | GAATCAAGGACTGGTTGCAG+TGG | - | tig0026340:16763-16782 | Msa1428370:intron | 50.0% |
| TGCCAGTGGCTCAATGCTTT+AGG | - | tig0026340:17179-17198 | Msa1428370:intron | 50.0% | |
| !! | CACCTAAAGCATTGAGCCAC+TGG | + | tig0026340:17184-17203 | None:intergenic | 50.0% |
| ! | GTGGAGTACTAATGAGGAGG+TGG | + | tig0026340:17318-17337 | None:intergenic | 50.0% |
| AAGGGACACCAAAGGAGTAG+TGG | + | tig0026340:17337-17356 | None:intergenic | 50.0% | |
| GTGTCCCTTACTCAACTCTC+TGG | - | tig0026340:17348-17367 | Msa1428370:intron | 50.0% | |
| GAGAACACTGGGAGCAACAA+TGG | - | tig0026340:17558-17577 | Msa1428370:CDS | 50.0% | |
| TAGGAGACTCAGGATTGGGA+GGG | + | tig0026340:17663-17682 | None:intergenic | 50.0% | |
| GACCCTGCATTACCAACACT+TGG | - | tig0026340:18144-18163 | Msa1428370:intron | 50.0% | |
| !! | GCACCAAGTGTTGGTAATGC+AGG | + | tig0026340:18150-18169 | None:intergenic | 50.0% |
| ACTACAGGACATTGGGTGCT+TGG | - | tig0026340:18291-18310 | Msa1428370:intron | 50.0% | |
| GACATTGGGTGCTTGGATTC+TGG | - | tig0026340:18298-18317 | Msa1428370:intron | 50.0% | |
| CTCTACCACGACGGTATTCA+AGG | - | tig0026340:18483-18502 | Msa1428370:intron | 50.0% | |
| CTACCACGACGGTATTCAAG+GGG | - | tig0026340:18485-18504 | Msa1428370:intron | 50.0% | |
| TACACCATGCAAATGGCCTC+AGG | - | tig0026340:18529-18548 | Msa1428370:intron | 50.0% | |
| TACAAGGGGCCAATGTAGAC+TGG | - | tig0026340:18631-18650 | Msa1428370:intron | 50.0% | |
| TTGGTGGAGATTTGACGTCC+AGG | - | tig0026340:19068-19087 | Msa1428370:CDS | 50.0% | |
| CCCCCAAACTCCTAAACAAG+TGG | - | tig0026340:19136-19155 | Msa1428370:CDS | 50.0% | |
| !! | ACTTGGTGTGAGAGCGTTAG+TGG | - | tig0026340:19178-19197 | Msa1428370:CDS | 50.0% |
| !! | CACTTGAGGGCGAGTTTTGT+TGG | - | tig0026340:19241-19260 | Msa1428370:intron | 50.0% |
| CCCAAGCTTTCCAAACCATC+TGG | + | tig0026340:20218-20237 | None:intergenic | 50.0% | |
| TCCGCACTTGGTTGCTATGT+CGG | - | tig0026340:20260-20279 | Msa1428370:intron | 50.0% | |
| ACCGACATAGCAACCAAGTG+CGG | + | tig0026340:20264-20283 | None:intergenic | 50.0% | |
| GTGGTCAAGGACAACATGGT+TGG | - | tig0026340:20321-20340 | Msa1428370:intron | 50.0% | |
| ACACACACAAGTGGACGAGC+CGG | - | tig0026340:16039-16058 | Msa1428370:CDS | 55.0% | |
| CGCAGGAGTGGAGGCAAATT+TGG | - | tig0026340:16790-16809 | Msa1428370:intron | 55.0% | |
| ACTCAGGATTGGGAGGGAGA+TGG | + | tig0026340:17657-17676 | None:intergenic | 55.0% | |
| GTAGGAGACTCAGGATTGGG+AGG | + | tig0026340:17664-17683 | None:intergenic | 55.0% | |
| GGGGAAGATCTCTACCACGA+CGG | - | tig0026340:18474-18493 | Msa1428370:intron | 55.0% | |
| CATCCCCTTGAATACCGTCG+TGG | + | tig0026340:18491-18510 | None:intergenic | 55.0% | |
| CGTACCTGAGGCCATTTGCA+TGG | + | tig0026340:18536-18555 | None:intergenic | 55.0% | |
| CTGGTTGCAGTGGCTTTCGC+AGG | - | tig0026340:16773-16792 | Msa1428370:intron | 60.0% | |
| TGCAGTGGCTTTCGCAGGAG+TGG | - | tig0026340:16778-16797 | Msa1428370:intron | 60.0% | |
| AGTGGCTTTCGCAGGAGTGG+AGG | - | tig0026340:16781-16800 | Msa1428370:intron | 60.0% | |
| ! | CTGGGGGCACATCAGGACTA+GGG | + | tig0026340:18782-18801 | None:intergenic | 60.0% |
| TTTAGGCGGGATGGGGTCCT+GGG | + | tig0026340:18800-18819 | None:intergenic | 60.0% | |
| CACACAAGTGGACGAGCCGG+AGG | - | tig0026340:16042-16061 | Msa1428370:CDS | 65.0% | |
| ! | CCTGGGGGCACATCAGGACT+AGG | + | tig0026340:18783-18802 | None:intergenic | 65.0% |
| CCTAGTCCTGATGTGCCCCC+AGG | - | tig0026340:18780-18799 | Msa1428370:intron | 65.0% | |
| TTAGGCGGGATGGGGTCCTG+GGG | + | tig0026340:18799-18818 | None:intergenic | 65.0% | |
| GTTTAGGCGGGATGGGGTCC+TGG | + | tig0026340:18801-18820 | None:intergenic | 65.0% | |
| ! | TGGGGTCCTGGGGGCACATC+AGG | + | tig0026340:18789-18808 | None:intergenic | 70.0% |
| TAGGCGGGATGGGGTCCTGG+GGG | + | tig0026340:18798-18817 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026340 | gene | 15411 | 20581 | 15411 | ID=Msa1428370;Name=Msa1428370 |
| tig0026340 | mRNA | 15411 | 20581 | 15411 | ID=Msa1428370-mRNA-1;Parent=Msa1428370;Name=Msa1428370-mRNA-1;_AED=0.11;_eAED=0.11;_QI=183|0.42|0.5|0.87|1|1|8|0|593 |
| tig0026340 | exon | 15411 | 15488 | 15411 | ID=Msa1428370-mRNA-1:exon:5953;Parent=Msa1428370-mRNA-1 |
| tig0026340 | exon | 15562 | 15923 | 15562 | ID=Msa1428370-mRNA-1:exon:5952;Parent=Msa1428370-mRNA-1 |
| tig0026340 | exon | 15980 | 16350 | 15980 | ID=Msa1428370-mRNA-1:exon:5951;Parent=Msa1428370-mRNA-1 |
| tig0026340 | exon | 17442 | 18001 | 17442 | ID=Msa1428370-mRNA-1:exon:5950;Parent=Msa1428370-mRNA-1 |
| tig0026340 | exon | 18394 | 18435 | 18394 | ID=Msa1428370-mRNA-1:exon:5949;Parent=Msa1428370-mRNA-1 |
| tig0026340 | exon | 19013 | 19230 | 19013 | ID=Msa1428370-mRNA-1:exon:5948;Parent=Msa1428370-mRNA-1 |
| tig0026340 | exon | 20139 | 20256 | 20139 | ID=Msa1428370-mRNA-1:exon:5947;Parent=Msa1428370-mRNA-1 |
| tig0026340 | exon | 20366 | 20581 | 20366 | ID=Msa1428370-mRNA-1:exon:5946;Parent=Msa1428370-mRNA-1 |
| tig0026340 | five_prime_UTR | 20399 | 20581 | 20399 | ID=Msa1428370-mRNA-1:five_prime_utr;Parent=Msa1428370-mRNA-1 |
| tig0026340 | CDS | 20366 | 20398 | 20366 | ID=Msa1428370-mRNA-1:cds;Parent=Msa1428370-mRNA-1 |
| tig0026340 | CDS | 20139 | 20256 | 20139 | ID=Msa1428370-mRNA-1:cds;Parent=Msa1428370-mRNA-1 |
| tig0026340 | CDS | 19013 | 19230 | 19013 | ID=Msa1428370-mRNA-1:cds;Parent=Msa1428370-mRNA-1 |
| tig0026340 | CDS | 18394 | 18435 | 18394 | ID=Msa1428370-mRNA-1:cds;Parent=Msa1428370-mRNA-1 |
| tig0026340 | CDS | 17442 | 18001 | 17442 | ID=Msa1428370-mRNA-1:cds;Parent=Msa1428370-mRNA-1 |
| tig0026340 | CDS | 15980 | 16350 | 15980 | ID=Msa1428370-mRNA-1:cds;Parent=Msa1428370-mRNA-1 |
| tig0026340 | CDS | 15562 | 15923 | 15562 | ID=Msa1428370-mRNA-1:cds;Parent=Msa1428370-mRNA-1 |
| tig0026340 | CDS | 15411 | 15488 | 15411 | ID=Msa1428370-mRNA-1:cds;Parent=Msa1428370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
