Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643250 | XP_003606419.2 | 96.988 | 498 | 12 | 2 | 1 | 498 | 1 | 495 | 0.0 | 1001 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643250 | sp|Q944L3|IDD9_ARATH | 79.775 | 178 | 36 | 0 | 38 | 215 | 38 | 215 | 2.96e-109 | 334 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0643250 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0643250 | -0.871787 | 5.235368e-67 | -8.615850e-47 |
| Msa0004920 | Msa0643250 | 0.801787 | 7.635032e-49 | -8.615850e-47 |
| Msa0027390 | Msa0643250 | 0.830008 | 3.739615e-55 | -8.615850e-47 |
| Msa0027580 | Msa0643250 | 0.809902 | 1.503657e-50 | -8.615850e-47 |
| Msa0041970 | Msa0643250 | 0.815842 | 7.513378e-52 | -8.615850e-47 |
| Msa0043170 | Msa0643250 | 0.814501 | 1.491815e-51 | -8.615850e-47 |
| Msa0050730 | Msa0643250 | 0.802509 | 5.424961e-49 | -8.615850e-47 |
| Msa0057140 | Msa0643250 | 0.807401 | 5.147381e-50 | -8.615850e-47 |
| Msa0075340 | Msa0643250 | 0.808750 | 2.656004e-50 | -8.615850e-47 |
| Msa0085360 | Msa0643250 | -0.817689 | 2.895261e-52 | -8.615850e-47 |
| Msa0094920 | Msa0643250 | 0.800441 | 1.439362e-48 | -8.615850e-47 |
| Msa0098430 | Msa0643250 | 0.812471 | 4.169217e-51 | -8.615850e-47 |
| Msa0099510 | Msa0643250 | 0.800162 | 1.640101e-48 | -8.615850e-47 |
| Msa0104610 | Msa0643250 | 0.810289 | 1.241272e-50 | -8.615850e-47 |
| Msa0105420 | Msa0643250 | 0.824937 | 6.158572e-54 | -8.615850e-47 |
| Msa0108870 | Msa0643250 | 0.814060 | 1.866792e-51 | -8.615850e-47 |
| Msa0120540 | Msa0643250 | 0.800896 | 1.162431e-48 | -8.615850e-47 |
| Msa0609970 | Msa0643250 | 0.808242 | 3.409526e-50 | -8.615850e-47 |
| Msa0619070 | Msa0643250 | 0.829521 | 4.914155e-55 | -8.615850e-47 |
| Msa0622340 | Msa0643250 | 0.809510 | 1.826420e-50 | -8.615850e-47 |
| Msa0626680 | Msa0643250 | 0.825765 | 3.920638e-54 | -8.615850e-47 |
| Msa0638280 | Msa0643250 | 0.843925 | 1.038299e-58 | -8.615850e-47 |
| Msa0638320 | Msa0643250 | 0.842170 | 3.045834e-58 | -8.615850e-47 |
| Msa0643250 | Msa0651150 | 0.803253 | 3.807762e-49 | -8.615850e-47 |
| Msa0643250 | Msa0664760 | 0.816455 | 5.481807e-52 | -8.615850e-47 |
| Msa0643250 | Msa0669850 | 0.818314 | 2.090643e-52 | -8.615850e-47 |
| Msa0643250 | Msa0671600 | 0.813604 | 2.352909e-51 | -8.615850e-47 |
| Msa0643250 | Msa0677080 | 0.810526 | 1.103344e-50 | -8.615850e-47 |
| Msa0643250 | Msa0677270 | 0.853020 | 3.148322e-61 | -8.615850e-47 |
| Msa0643250 | Msa0679550 | 0.823144 | 1.622624e-53 | -8.615850e-47 |
| Msa0643250 | Msa0682950 | 0.920526 | 1.144667e-87 | -8.615850e-47 |
| Msa0643250 | Msa0693380 | 0.813024 | 3.156038e-51 | -8.615850e-47 |
| Msa0643250 | Msa0711490 | 0.814517 | 1.480121e-51 | -8.615850e-47 |
| Msa0643250 | Msa0715110 | 0.825375 | 4.850841e-54 | -8.615850e-47 |
| Msa0643250 | Msa0724830 | 0.802673 | 5.017903e-49 | -8.615850e-47 |
| Msa0643250 | Msa0735310 | 0.807108 | 5.937017e-50 | -8.615850e-47 |
| Msa0643250 | Msa0735620 | -0.805980 | 1.027091e-49 | -8.615850e-47 |
| Msa0643250 | Msa0737800 | 0.822332 | 2.506805e-53 | -8.615850e-47 |
| Msa0643250 | Msa0739120 | 0.831121 | 1.997590e-55 | -8.615850e-47 |
| Msa0643250 | Msa0743680 | 0.806337 | 8.638177e-50 | -8.615850e-47 |
| Msa0643250 | Msa0744090 | 0.825270 | 5.137630e-54 | -8.615850e-47 |
| Msa0643250 | Msa0754720 | -0.845568 | 3.744535e-59 | -8.615850e-47 |
| Msa0643250 | Msa0756630 | -0.811802 | 5.834337e-51 | -8.615850e-47 |
| Msa0643250 | Msa0770350 | 0.801495 | 8.764503e-49 | -8.615850e-47 |
| Msa0643250 | Msa0778320 | 0.807489 | 4.931282e-50 | -8.615850e-47 |
| Msa0643250 | Msa0784620 | 0.805537 | 1.272686e-49 | -8.615850e-47 |
| Msa0643250 | Msa0788710 | 0.829720 | 4.394522e-55 | -8.615850e-47 |
| Msa0643250 | Msa0790390 | -0.816328 | 5.853573e-52 | -8.615850e-47 |
| Msa0643250 | Msa0798070 | 0.806437 | 8.230364e-50 | -8.615850e-47 |
| Msa0643250 | Msa0814320 | 0.830514 | 2.814120e-55 | -8.615850e-47 |
| Msa0643250 | Msa0817260 | 0.813476 | 2.510553e-51 | -8.615850e-47 |
| Msa0643250 | Msa0817270 | 0.822269 | 2.593156e-53 | -8.615850e-47 |
| Msa0643250 | Msa0824730 | 0.811750 | 5.988242e-51 | -8.615850e-47 |
| Msa0643250 | Msa0825280 | 0.824696 | 7.019325e-54 | -8.615850e-47 |
| Msa0643250 | Msa0826190 | 0.801893 | 7.262412e-49 | -8.615850e-47 |
| Msa0643250 | Msa0829620 | 0.829238 | 5.756849e-55 | -8.615850e-47 |
| Msa0643250 | Msa0851470 | 0.820553 | 6.455219e-53 | -8.615850e-47 |
| Msa0643250 | Msa0863800 | 0.812341 | 4.452040e-51 | -8.615850e-47 |
| Msa0643250 | Msa0866120 | 0.810386 | 1.183123e-50 | -8.615850e-47 |
| Msa0643250 | Msa0867890 | 0.804737 | 1.871027e-49 | -8.615850e-47 |
| Msa0643250 | Msa0881020 | 0.831115 | 2.004762e-55 | -8.615850e-47 |
| Msa0643250 | Msa0881030 | 0.840247 | 9.756131e-58 | -8.615850e-47 |
| Msa0643250 | Msa0881580 | 0.819774 | 9.734258e-53 | -8.615850e-47 |
| Msa0643250 | Msa0893810 | 0.806938 | 6.449027e-50 | -8.615850e-47 |
| Msa0643250 | Msa0908170 | 0.851884 | 6.633705e-61 | -8.615850e-47 |
| Msa0643250 | Msa0909000 | -0.814863 | 1.240716e-51 | -8.615850e-47 |
| Msa0643250 | Msa0910980 | -0.805782 | 1.130222e-49 | -8.615850e-47 |
| Msa0643250 | Msa0920550 | 0.823030 | 1.724447e-53 | -8.615850e-47 |
| Msa0643250 | Msa0922030 | 0.807049 | 6.109521e-50 | -8.615850e-47 |
| Msa0643250 | Msa0933440 | 0.804860 | 1.763751e-49 | -8.615850e-47 |
| Msa0643250 | Msa0945840 | 0.826732 | 2.308458e-54 | -8.615850e-47 |
| Msa0643250 | Msa0946080 | 0.818117 | 2.317336e-52 | -8.615850e-47 |
| Msa0643250 | Msa0959010 | 0.827845 | 1.249266e-54 | -8.615850e-47 |
| Msa0643250 | Msa0981430 | 0.804554 | 2.042759e-49 | -8.615850e-47 |
| Msa0643250 | Msa0993530 | 0.845599 | 3.674109e-59 | -8.615850e-47 |
| Msa0643250 | Msa1037700 | -0.849533 | 3.041329e-60 | -8.615850e-47 |
| Msa0643250 | Msa1040890 | 0.818235 | 2.179097e-52 | -8.615850e-47 |
| Msa0643250 | Msa1041520 | 0.819764 | 9.783693e-53 | -8.615850e-47 |
| Msa0643250 | Msa1048700 | 0.802606 | 5.180686e-49 | -8.615850e-47 |
| Msa0643250 | Msa1050420 | 0.801492 | 8.777776e-49 | -8.615850e-47 |
| Msa0643250 | Msa1056460 | 0.809499 | 1.835597e-50 | -8.615850e-47 |
| Msa0643250 | Msa1082500 | 0.804166 | 2.460667e-49 | -8.615850e-47 |
| Msa0643250 | Msa1083210 | 0.819909 | 9.066195e-53 | -8.615850e-47 |
| Msa0643250 | Msa1100720 | 0.801435 | 9.018497e-49 | -8.615850e-47 |
| Msa0643250 | Msa1125550 | 0.802309 | 5.962779e-49 | -8.615850e-47 |
| Msa0643250 | Msa1127830 | 0.827833 | 1.257179e-54 | -8.615850e-47 |
| Msa0643250 | Msa1130210 | -0.879852 | 8.879327e-70 | -8.615850e-47 |
| Msa0643250 | Msa1135880 | 0.802333 | 5.896890e-49 | -8.615850e-47 |
| Msa0643250 | Msa1158660 | 0.802951 | 4.395986e-49 | -8.615850e-47 |
| Msa0643250 | Msa1162830 | 0.807210 | 5.650141e-50 | -8.615850e-47 |
| Msa0643250 | Msa1185540 | 0.817140 | 3.848182e-52 | -8.615850e-47 |
| Msa0643250 | Msa1193950 | -0.806865 | 6.683998e-50 | -8.615850e-47 |
| Msa0643250 | Msa1214880 | 0.810669 | 1.027457e-50 | -8.615850e-47 |
| Msa0643250 | Msa1217660 | 0.818222 | 2.193671e-52 | -8.615850e-47 |
| Msa0643250 | Msa1217830 | 0.817532 | 3.141354e-52 | -8.615850e-47 |
| Msa0643250 | Msa1217860 | 0.818635 | 1.768195e-52 | -8.615850e-47 |
| Msa0643250 | Msa1218650 | 0.812120 | 4.973808e-51 | -8.615850e-47 |
| Msa0643250 | Msa1219110 | 0.815718 | 8.008183e-52 | -8.615850e-47 |
| Msa0643250 | Msa1233500 | 0.807145 | 5.832060e-50 | -8.615850e-47 |
| Msa0643250 | Msa1246530 | -0.806609 | 7.571246e-50 | -8.615850e-47 |
| Msa0643250 | Msa1249920 | 0.857421 | 1.651122e-62 | -8.615850e-47 |
| Msa0643250 | Msa1255040 | -0.802823 | 4.671955e-49 | -8.615850e-47 |
| Msa0643250 | Msa1280620 | 0.835260 | 1.861435e-56 | -8.615850e-47 |
| Msa0643250 | Msa1291350 | 0.838393 | 2.954242e-57 | -8.615850e-47 |
| Msa0643250 | Msa1294960 | 0.807753 | 4.333879e-50 | -8.615850e-47 |
| Msa0643250 | Msa1300860 | 0.856064 | 4.141379e-62 | -8.615850e-47 |
| Msa0643250 | Msa1310660 | 0.806126 | 9.570727e-50 | -8.615850e-47 |
| Msa0643250 | Msa1314100 | 0.809197 | 2.131573e-50 | -8.615850e-47 |
| Msa0643250 | Msa1331910 | 0.817507 | 3.180845e-52 | -8.615850e-47 |
| Msa0643250 | Msa1331920 | 0.816720 | 4.780081e-52 | -8.615850e-47 |
| Msa0643250 | Msa1337730 | 0.803217 | 3.872711e-49 | -8.615850e-47 |
| Msa0643250 | Msa1340260 | 0.808119 | 3.622879e-50 | -8.615850e-47 |
| Msa0643250 | Msa1341570 | 0.808219 | 3.447904e-50 | -8.615850e-47 |
| Msa0643250 | Msa1350690 | 0.831695 | 1.443147e-55 | -8.615850e-47 |
| Msa0643250 | Msa1360280 | 0.813951 | 1.973565e-51 | -8.615850e-47 |
| Msa0643250 | Msa1362510 | 0.835587 | 1.538464e-56 | -8.615850e-47 |
| Msa0643250 | Msa1386230 | 0.804049 | 2.603183e-49 | -8.615850e-47 |
| Msa0643250 | Msa1388450 | 0.801390 | 9.210488e-49 | -8.615850e-47 |
| Msa0643250 | Msa1390230 | 0.812894 | 3.369502e-51 | -8.615850e-47 |
| Msa0643250 | Msa1397050 | 0.809235 | 2.091268e-50 | -8.615850e-47 |
| Msa0643250 | Msa1398860 | 0.820866 | 5.469818e-53 | -8.615850e-47 |
| Msa0643250 | Msa1402270 | 0.816532 | 5.268585e-52 | -8.615850e-47 |
| Msa0643250 | Msa1403580 | -0.802887 | 4.533262e-49 | -8.615850e-47 |
| Msa0643250 | Msa1404540 | 0.806558 | 7.760079e-50 | -8.615850e-47 |
| Msa0643250 | Msa1415130 | 0.804272 | 2.338768e-49 | -8.615850e-47 |
| Msa0643250 | Msa1415940 | 0.841741 | 3.953850e-58 | -8.615850e-47 |
| Msa0643250 | Msa1419110 | 0.808567 | 2.907280e-50 | -8.615850e-47 |
| Msa0643250 | Msa1422840 | 0.820815 | 5.619348e-53 | -8.615850e-47 |
| Msa0643250 | Msa1427830 | 0.800041 | 1.735735e-48 | -8.615850e-47 |
| Msa0643250 | Msa1428370 | 0.816310 | 5.907091e-52 | -8.615850e-47 |
| Msa0643250 | Msa1431060 | 0.802147 | 6.441393e-49 | -8.615850e-47 |
| Msa0643250 | Msa1435400 | 0.805069 | 1.594915e-49 | -8.615850e-47 |
| Msa0643250 | Msa1439230 | 0.811113 | 8.236482e-51 | -8.615850e-47 |
| Msa0643250 | Msa1439960 | 0.827408 | 1.590879e-54 | -8.615850e-47 |
| Msa0643250 | Msa1442220 | -0.841916 | 3.555011e-58 | -8.615850e-47 |
| Msa0643250 | Msa1452470 | 0.806606 | 7.580579e-50 | -8.615850e-47 |
| Msa0643250 | Msa1452480 | 0.807059 | 6.082423e-50 | -8.615850e-47 |
| Msa0643250 | Msa1454110 | 0.811699 | 6.142464e-51 | -8.615850e-47 |
| Msa0643250 | Msa1464290 | 0.808184 | 3.508453e-50 | -8.615850e-47 |
| Msa0643250 | Msa1466090 | 0.802237 | 6.169678e-49 | -8.615850e-47 |
| Msa0137040 | Msa0643250 | 0.805812 | 1.114055e-49 | -8.615850e-47 |
| Msa0140170 | Msa0643250 | 0.813712 | 2.227963e-51 | -8.615850e-47 |
| Msa0156650 | Msa0643250 | -0.809399 | 1.928707e-50 | -8.615850e-47 |
| Msa0165300 | Msa0643250 | 0.838617 | 2.585565e-57 | -8.615850e-47 |
| Msa0165970 | Msa0643250 | 0.800030 | 1.744693e-48 | -8.615850e-47 |
| Msa0177230 | Msa0643250 | 0.812653 | 3.805096e-51 | -8.615850e-47 |
| Msa0177270 | Msa0643250 | 0.828721 | 7.682320e-55 | -8.615850e-47 |
| Msa0177700 | Msa0643250 | -0.819861 | 9.298992e-53 | -8.615850e-47 |
| Msa0182280 | Msa0643250 | 0.805063 | 1.599595e-49 | -8.615850e-47 |
| Msa0185590 | Msa0643250 | 0.815884 | 7.354964e-52 | -8.615850e-47 |
| Msa0188630 | Msa0643250 | 0.818776 | 1.642861e-52 | -8.615850e-47 |
| Msa0188680 | Msa0643250 | -0.816012 | 6.885586e-52 | -8.615850e-47 |
| Msa0188730 | Msa0643250 | -0.802901 | 4.503300e-49 | -8.615850e-47 |
| Msa0191250 | Msa0643250 | 0.818280 | 2.129013e-52 | -8.615850e-47 |
| Msa0194020 | Msa0643250 | 0.801939 | 7.104625e-49 | -8.615850e-47 |
| Msa0196020 | Msa0643250 | -0.805771 | 1.136475e-49 | -8.615850e-47 |
| Msa0197850 | Msa0643250 | 0.805032 | 1.623650e-49 | -8.615850e-47 |
| Msa0198520 | Msa0643250 | 0.815744 | 7.902241e-52 | -8.615850e-47 |
| Msa0198530 | Msa0643250 | 0.809396 | 1.932174e-50 | -8.615850e-47 |
| Msa0208810 | Msa0643250 | 0.813736 | 2.200929e-51 | -8.615850e-47 |
| Msa0223100 | Msa0643250 | 0.820439 | 6.855342e-53 | -8.615850e-47 |
| Msa0223290 | Msa0643250 | 0.837461 | 5.127304e-57 | -8.615850e-47 |
| Msa0223380 | Msa0643250 | 0.823914 | 1.071771e-53 | -8.615850e-47 |
| Msa0226290 | Msa0643250 | 0.807183 | 5.724708e-50 | -8.615850e-47 |
| Msa0227400 | Msa0643250 | 0.833291 | 5.801965e-56 | -8.615850e-47 |
| Msa0227510 | Msa0643250 | 0.814802 | 1.279802e-51 | -8.615850e-47 |
| Msa0235890 | Msa0643250 | 0.805844 | 1.097168e-49 | -8.615850e-47 |
| Msa0236440 | Msa0643250 | 0.810764 | 9.800320e-51 | -8.615850e-47 |
| Msa0372660 | Msa0643250 | 0.801508 | 8.712780e-49 | -8.615850e-47 |
| Msa0372670 | Msa0643250 | 0.803783 | 2.956971e-49 | -8.615850e-47 |
| Msa0377530 | Msa0643250 | 0.842501 | 2.487890e-58 | -8.615850e-47 |
| Msa0388030 | Msa0643250 | -0.807982 | 3.872743e-50 | -8.615850e-47 |
| Msa0393680 | Msa0643250 | 0.811746 | 5.999883e-51 | -8.615850e-47 |
| Msa0393710 | Msa0643250 | 0.837129 | 6.235629e-57 | -8.615850e-47 |
| Msa0393950 | Msa0643250 | 0.805203 | 1.495131e-49 | -8.615850e-47 |
| Msa0395870 | Msa0643250 | 0.821147 | 4.711899e-53 | -8.615850e-47 |
| Msa0404700 | Msa0643250 | 0.837876 | 4.013484e-57 | -8.615850e-47 |
| Msa0415810 | Msa0643250 | 0.817642 | 2.966749e-52 | -8.615850e-47 |
| Msa0419620 | Msa0643250 | -0.808007 | 3.827318e-50 | -8.615850e-47 |
| Msa0423360 | Msa0643250 | -0.818336 | 2.066921e-52 | -8.615850e-47 |
| Msa0426330 | Msa0643250 | 0.817624 | 2.994556e-52 | -8.615850e-47 |
| Msa0426810 | Msa0643250 | 0.826162 | 3.156074e-54 | -8.615850e-47 |
| Msa0430820 | Msa0643250 | 0.805269 | 1.448184e-49 | -8.615850e-47 |
| Msa0438730 | Msa0643250 | 0.801833 | 7.469881e-49 | -8.615850e-47 |
| Msa0445280 | Msa0643250 | 0.812920 | 3.326245e-51 | -8.615850e-47 |
| Msa0460930 | Msa0643250 | 0.803963 | 2.711837e-49 | -8.615850e-47 |
| Msa0462540 | Msa0643250 | 0.814785 | 1.290807e-51 | -8.615850e-47 |
| Msa0464900 | Msa0643250 | 0.868987 | 4.339581e-66 | -8.615850e-47 |
| Msa0467960 | Msa0643250 | -0.818046 | 2.404294e-52 | -8.615850e-47 |
| Msa0469910 | Msa0643250 | -0.843051 | 1.776798e-58 | -8.615850e-47 |
| Msa0473080 | Msa0643250 | 0.802021 | 6.834825e-49 | -8.615850e-47 |
| Msa0473240 | Msa0643250 | 0.800259 | 1.567603e-48 | -8.615850e-47 |
| Msa0474590 | Msa0643250 | 0.803935 | 2.748615e-49 | -8.615850e-47 |
| Msa0474700 | Msa0643250 | 0.805692 | 1.180486e-49 | -8.615850e-47 |
| Msa0239510 | Msa0643250 | 0.831649 | 1.481282e-55 | -8.615850e-47 |
| Msa0239940 | Msa0643250 | 0.827287 | 1.700174e-54 | -8.615850e-47 |
| Msa0245850 | Msa0643250 | 0.811213 | 7.833198e-51 | -8.615850e-47 |
| Msa0248980 | Msa0643250 | 0.827034 | 1.955107e-54 | -8.615850e-47 |
| Msa0250670 | Msa0643250 | 0.801493 | 8.774992e-49 | -8.615850e-47 |
| Msa0251250 | Msa0643250 | 0.801166 | 1.023573e-48 | -8.615850e-47 |
| Msa0252240 | Msa0643250 | 0.817258 | 3.619414e-52 | -8.615850e-47 |
| Msa0259270 | Msa0643250 | 0.821579 | 3.745659e-53 | -8.615850e-47 |
| Msa0259560 | Msa0643250 | 0.816070 | 6.682260e-52 | -8.615850e-47 |
| Msa0264930 | Msa0643250 | 0.810293 | 1.238930e-50 | -8.615850e-47 |
| Msa0266210 | Msa0643250 | 0.833755 | 4.443800e-56 | -8.615850e-47 |
| Msa0275400 | Msa0643250 | -0.844621 | 6.747823e-59 | -8.615850e-47 |
| Msa0276920 | Msa0643250 | 0.824124 | 9.564368e-54 | -8.615850e-47 |
| Msa0287310 | Msa0643250 | 0.801354 | 9.365806e-49 | -8.615850e-47 |
| Msa0287670 | Msa0643250 | 0.832066 | 1.168502e-55 | -8.615850e-47 |
| Msa0288730 | Msa0643250 | 0.833361 | 5.572642e-56 | -8.615850e-47 |
| Msa0289400 | Msa0643250 | 0.830490 | 2.852393e-55 | -8.615850e-47 |
| Msa0291520 | Msa0643250 | 0.804040 | 2.614430e-49 | -8.615850e-47 |
| Msa0294150 | Msa0643250 | 0.820702 | 5.966336e-53 | -8.615850e-47 |
| Msa0302650 | Msa0643250 | 0.839357 | 1.663324e-57 | -8.615850e-47 |
| Msa0302980 | Msa0643250 | 0.818245 | 2.167323e-52 | -8.615850e-47 |
| Msa0304330 | Msa0643250 | 0.802011 | 6.868522e-49 | -8.615850e-47 |
| Msa0304700 | Msa0643250 | 0.814956 | 1.182705e-51 | -8.615850e-47 |
| Msa0305890 | Msa0643250 | 0.804282 | 2.328113e-49 | -8.615850e-47 |
| Msa0307830 | Msa0643250 | -0.801770 | 7.697022e-49 | -8.615850e-47 |
| Msa0308200 | Msa0643250 | 0.808323 | 3.276458e-50 | -8.615850e-47 |
| Msa0308220 | Msa0643250 | 0.825925 | 3.593149e-54 | -8.615850e-47 |
| Msa0308550 | Msa0643250 | 0.811385 | 7.188307e-51 | -8.615850e-47 |
| Msa0310410 | Msa0643250 | 0.802174 | 6.356881e-49 | -8.615850e-47 |
| Msa0311860 | Msa0643250 | 0.840234 | 9.830438e-58 | -8.615850e-47 |
| Msa0317390 | Msa0643250 | 0.815208 | 1.039723e-51 | -8.615850e-47 |
| Msa0320610 | Msa0643250 | 0.804262 | 2.350859e-49 | -8.615850e-47 |
| Msa0321170 | Msa0643250 | 0.827208 | 1.775837e-54 | -8.615850e-47 |
| Msa0321190 | Msa0643250 | 0.821469 | 3.970841e-53 | -8.615850e-47 |
| Msa0327410 | Msa0643250 | 0.822366 | 2.461364e-53 | -8.615850e-47 |
| Msa0334350 | Msa0643250 | 0.834859 | 2.348353e-56 | -8.615850e-47 |
| Msa0335040 | Msa0643250 | 0.817718 | 2.852127e-52 | -8.615850e-47 |
| Msa0340810 | Msa0643250 | 0.805333 | 1.404591e-49 | -8.615850e-47 |
| Msa0344870 | Msa0643250 | 0.804174 | 2.451490e-49 | -8.615850e-47 |
| Msa0356890 | Msa0643250 | -0.807327 | 5.335444e-50 | -8.615850e-47 |
| Msa0362060 | Msa0643250 | 0.800116 | 1.675715e-48 | -8.615850e-47 |
| Msa0363170 | Msa0643250 | 0.831852 | 1.319524e-55 | -8.615850e-47 |
| Msa0483030 | Msa0643250 | 0.805090 | 1.578968e-49 | -8.615850e-47 |
| Msa0484780 | Msa0643250 | 0.812940 | 3.292820e-51 | -8.615850e-47 |
| Msa0489030 | Msa0643250 | 0.814095 | 1.834379e-51 | -8.615850e-47 |
| Msa0493920 | Msa0643250 | 0.804183 | 2.441388e-49 | -8.615850e-47 |
| Msa0505060 | Msa0643250 | 0.829985 | 3.788297e-55 | -8.615850e-47 |
| Msa0511720 | Msa0643250 | -0.802022 | 6.831543e-49 | -8.615850e-47 |
| Msa0517490 | Msa0643250 | 0.834539 | 2.827119e-56 | -8.615850e-47 |
| Msa0519390 | Msa0643250 | 0.802517 | 5.404759e-49 | -8.615850e-47 |
| Msa0526890 | Msa0643250 | 0.828433 | 9.015570e-55 | -8.615850e-47 |
| Msa0535030 | Msa0643250 | 0.811397 | 7.145144e-51 | -8.615850e-47 |
| Msa0535060 | Msa0643250 | 0.808195 | 3.489155e-50 | -8.615850e-47 |
| Msa0536790 | Msa0643250 | 0.820284 | 7.439311e-53 | -8.615850e-47 |
| Msa0542160 | Msa0643250 | 0.809880 | 1.520726e-50 | -8.615850e-47 |
| Msa0545060 | Msa0643250 | 0.808159 | 3.552070e-50 | -8.615850e-47 |
| Msa0547400 | Msa0643250 | 0.947137 | 1.205725e-105 | -8.615850e-47 |
| Msa0568820 | Msa0643250 | 0.825805 | 3.836287e-54 | -8.615850e-47 |
| Msa0578090 | Msa0643250 | 0.804412 | 2.187665e-49 | -8.615850e-47 |
| Msa0586850 | Msa0643250 | 0.814258 | 1.688309e-51 | -8.615850e-47 |
| Msa0587190 | Msa0643250 | 0.803358 | 3.622372e-49 | -8.615850e-47 |
| Msa0602120 | Msa0643250 | 0.948923 | 3.588550e-107 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643250 | MtrunA17_Chr4g0029521 | 96.988 | 498 | 12 | 2 | 1 | 498 | 1 | 495 | 0.0 | 1001 |
| Msa0643250 | MtrunA17_Chr2g0326381 | 56.825 | 359 | 110 | 13 | 38 | 371 | 31 | 369 | 4.60e-126 | 374 |
| Msa0643250 | MtrunA17_Chr1g0181381 | 52.442 | 389 | 142 | 10 | 1 | 355 | 3 | 382 | 8.52e-123 | 368 |
| Msa0643250 | MtrunA17_Chr7g0263941 | 76.847 | 203 | 41 | 5 | 24 | 223 | 18 | 217 | 8.19e-112 | 337 |
| Msa0643250 | MtrunA17_Chr8g0373541 | 69.545 | 220 | 60 | 3 | 9 | 226 | 7 | 221 | 1.31e-110 | 337 |
| Msa0643250 | MtrunA17_Chr2g0330171 | 42.536 | 489 | 182 | 16 | 36 | 496 | 43 | 460 | 4.12e-110 | 335 |
| Msa0643250 | MtrunA17_Chr8g0342421 | 77.000 | 200 | 43 | 2 | 8 | 205 | 29 | 227 | 1.87e-108 | 332 |
| Msa0643250 | MtrunA17_Chr4g0040571 | 43.750 | 496 | 168 | 16 | 34 | 461 | 34 | 486 | 2.41e-108 | 331 |
| Msa0643250 | MtrunA17_Chr1g0185121 | 54.459 | 314 | 118 | 6 | 35 | 345 | 36 | 327 | 5.92e-108 | 328 |
| Msa0643250 | MtrunA17_Chr1g0199101 | 39.964 | 558 | 219 | 18 | 18 | 497 | 13 | 532 | 2.54e-107 | 330 |
| Msa0643250 | MtrunA17_Chr1g0191991 | 77.717 | 184 | 38 | 2 | 37 | 220 | 61 | 241 | 4.49e-104 | 321 |
| Msa0643250 | MtrunA17_Chr1g0151351 | 80.952 | 168 | 32 | 0 | 39 | 206 | 41 | 208 | 1.58e-103 | 317 |
| Msa0643250 | MtrunA17_Chr1g0163001 | 74.194 | 186 | 45 | 2 | 36 | 219 | 40 | 224 | 4.44e-102 | 316 |
| Msa0643250 | MtrunA17_Chr1g0162971 | 80.488 | 164 | 31 | 1 | 39 | 202 | 41 | 203 | 1.43e-101 | 312 |
| Msa0643250 | MtrunA17_Chr1g0210821 | 75.141 | 177 | 41 | 2 | 42 | 218 | 47 | 220 | 1.95e-99 | 310 |
| Msa0643250 | MtrunA17_Chr3g0141431 | 76.543 | 162 | 38 | 0 | 35 | 196 | 18 | 179 | 9.59e-97 | 298 |
| Msa0643250 | MtrunA17_Chr7g0268961 | 81.935 | 155 | 27 | 1 | 49 | 203 | 32 | 185 | 2.03e-95 | 297 |
| Msa0643250 | MtrunA17_Chr2g0324991 | 86.364 | 132 | 17 | 1 | 50 | 181 | 3 | 133 | 5.35e-83 | 253 |
| Msa0643250 | MtrunA17_Chr6g0479921 | 61.783 | 157 | 58 | 2 | 39 | 194 | 29 | 184 | 5.44e-69 | 228 |
| Msa0643250 | MtrunA17_Chr8g0375521 | 60.256 | 156 | 61 | 1 | 39 | 193 | 27 | 182 | 6.21e-69 | 226 |
| Msa0643250 | MtrunA17_Chr2g0320341 | 34.839 | 155 | 88 | 4 | 48 | 189 | 224 | 378 | 1.20e-24 | 105 |
| Msa0643250 | MtrunA17_Chr1g0200421 | 34.868 | 152 | 86 | 4 | 53 | 192 | 236 | 386 | 2.19e-24 | 106 |
| Msa0643250 | MtrunA17_Chr3g0123941 | 35.897 | 156 | 93 | 4 | 44 | 192 | 113 | 268 | 5.42e-24 | 102 |
| Msa0643250 | MtrunA17_Chr5g0422571 | 34.682 | 173 | 102 | 6 | 32 | 195 | 79 | 249 | 1.22e-21 | 95.1 |
| Msa0643250 | MtrunA17_Chr8g0382121 | 33.987 | 153 | 91 | 4 | 47 | 189 | 104 | 256 | 6.42e-21 | 93.6 |
| Msa0643250 | MtrunA17_Chr7g0258011 | 33.540 | 161 | 90 | 5 | 62 | 206 | 183 | 342 | 4.25e-20 | 91.7 |
| Msa0643250 | MtrunA17_Chr1g0198651 | 34.507 | 142 | 81 | 4 | 62 | 192 | 109 | 249 | 7.90e-20 | 89.7 |
| Msa0643250 | MtrunA17_Chr4g0053341 | 34.211 | 152 | 89 | 5 | 50 | 192 | 69 | 218 | 8.44e-20 | 88.6 |
| Msa0643250 | MtrunA17_Chr4g0026521 | 36.691 | 139 | 79 | 4 | 62 | 192 | 125 | 262 | 1.07e-19 | 89.7 |
| Msa0643250 | MtrunA17_Chr8g0352011 | 36.691 | 139 | 79 | 4 | 62 | 192 | 173 | 310 | 1.21e-19 | 90.1 |
| Msa0643250 | MtrunA17_Chr2g0321291 | 37.410 | 139 | 78 | 4 | 62 | 192 | 140 | 277 | 2.27e-19 | 89.0 |
| Msa0643250 | MtrunA17_Chr1g0173841 | 35.971 | 139 | 80 | 4 | 62 | 192 | 222 | 359 | 5.75e-19 | 89.0 |
| Msa0643250 | MtrunA17_Chr2g0328921 | 35.971 | 139 | 80 | 4 | 62 | 192 | 145 | 282 | 9.80e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643250 | AT3G45260.2 | 79.775 | 178 | 36 | 0 | 38 | 215 | 38 | 215 | 3.01e-110 | 334 |
| Msa0643250 | AT3G45260.1 | 79.775 | 178 | 36 | 0 | 38 | 215 | 38 | 215 | 3.01e-110 | 334 |
| Msa0643250 | AT3G50700.1 | 76.562 | 192 | 40 | 3 | 14 | 202 | 7 | 196 | 4.64e-109 | 332 |
| Msa0643250 | AT5G60470.3 | 69.856 | 209 | 55 | 2 | 11 | 211 | 4 | 212 | 9.30e-109 | 331 |
| Msa0643250 | AT5G60470.2 | 69.856 | 209 | 55 | 2 | 11 | 211 | 8 | 216 | 9.86e-109 | 331 |
| Msa0643250 | AT5G03150.1 | 54.142 | 338 | 125 | 8 | 38 | 348 | 52 | 386 | 3.72e-107 | 328 |
| Msa0643250 | AT5G66730.1 | 77.895 | 190 | 39 | 3 | 14 | 202 | 7 | 194 | 1.04e-106 | 327 |
| Msa0643250 | AT1G03840.1 | 82.353 | 170 | 29 | 1 | 34 | 203 | 36 | 204 | 1.66e-106 | 327 |
| Msa0643250 | AT5G44160.1 | 44.776 | 469 | 212 | 13 | 13 | 461 | 11 | 452 | 4.17e-106 | 325 |
| Msa0643250 | AT1G55110.3 | 80.814 | 172 | 33 | 0 | 39 | 210 | 63 | 234 | 1.79e-105 | 322 |
| Msa0643250 | AT1G55110.1 | 80.814 | 172 | 33 | 0 | 39 | 210 | 63 | 234 | 1.79e-105 | 322 |
| Msa0643250 | AT1G55110.2 | 80.814 | 172 | 33 | 0 | 39 | 210 | 63 | 234 | 1.79e-105 | 322 |
| Msa0643250 | AT2G02080.1 | 41.189 | 471 | 197 | 11 | 31 | 461 | 46 | 476 | 2.20e-105 | 324 |
| Msa0643250 | AT2G02080.4 | 41.189 | 471 | 197 | 11 | 31 | 461 | 46 | 476 | 2.20e-105 | 324 |
| Msa0643250 | AT2G02080.5 | 41.189 | 471 | 197 | 11 | 31 | 461 | 46 | 476 | 2.20e-105 | 324 |
| Msa0643250 | AT2G02080.3 | 41.189 | 471 | 197 | 11 | 31 | 461 | 46 | 476 | 2.20e-105 | 324 |
| Msa0643250 | AT3G13810.6 | 79.310 | 174 | 36 | 0 | 33 | 206 | 45 | 218 | 9.85e-104 | 319 |
| Msa0643250 | AT3G13810.5 | 79.310 | 174 | 36 | 0 | 33 | 206 | 59 | 232 | 1.42e-103 | 319 |
| Msa0643250 | AT3G13810.4 | 79.310 | 174 | 36 | 0 | 33 | 206 | 64 | 237 | 1.43e-103 | 320 |
| Msa0643250 | AT3G13810.1 | 79.310 | 174 | 36 | 0 | 33 | 206 | 64 | 237 | 1.43e-103 | 320 |
| Msa0643250 | AT4G02670.1 | 81.212 | 165 | 31 | 0 | 39 | 203 | 53 | 217 | 2.25e-103 | 315 |
| Msa0643250 | AT4G02670.2 | 81.212 | 165 | 31 | 0 | 39 | 203 | 55 | 219 | 2.37e-103 | 315 |
| Msa0643250 | AT1G03840.2 | 81.176 | 170 | 29 | 2 | 34 | 203 | 36 | 202 | 7.86e-103 | 317 |
| Msa0643250 | AT1G14580.1 | 77.647 | 170 | 37 | 1 | 37 | 206 | 51 | 219 | 4.83e-102 | 314 |
| Msa0643250 | AT1G14580.2 | 77.647 | 170 | 37 | 1 | 37 | 206 | 51 | 219 | 4.83e-102 | 314 |
| Msa0643250 | AT1G14580.3 | 77.647 | 170 | 37 | 1 | 37 | 206 | 65 | 233 | 9.16e-102 | 314 |
| Msa0643250 | AT5G60470.1 | 77.160 | 162 | 37 | 0 | 50 | 211 | 46 | 207 | 7.33e-98 | 303 |
| Msa0643250 | AT2G02070.2 | 74.713 | 174 | 39 | 2 | 39 | 208 | 52 | 224 | 1.17e-97 | 307 |
| Msa0643250 | AT2G02070.1 | 74.713 | 174 | 39 | 2 | 39 | 208 | 52 | 224 | 1.17e-97 | 307 |
| Msa0643250 | AT5G44160.2 | 44.804 | 433 | 192 | 13 | 49 | 461 | 8 | 413 | 2.47e-97 | 301 |
| Msa0643250 | AT3G13810.3 | 82.166 | 157 | 28 | 0 | 50 | 206 | 68 | 224 | 1.55e-96 | 301 |
| Msa0643250 | AT3G13810.2 | 82.166 | 157 | 28 | 0 | 50 | 206 | 82 | 238 | 2.23e-96 | 301 |
| Msa0643250 | AT2G02080.6 | 39.819 | 442 | 186 | 11 | 63 | 464 | 1 | 402 | 6.69e-90 | 282 |
| Msa0643250 | AT2G02080.2 | 39.819 | 442 | 186 | 11 | 63 | 464 | 1 | 402 | 6.69e-90 | 282 |
| Msa0643250 | AT1G68130.1 | 61.350 | 163 | 62 | 1 | 32 | 193 | 34 | 196 | 2.98e-72 | 235 |
| Msa0643250 | AT2G01940.1 | 62.025 | 158 | 59 | 1 | 39 | 195 | 44 | 201 | 5.76e-71 | 233 |
| Msa0643250 | AT1G25250.3 | 62.420 | 157 | 57 | 2 | 39 | 193 | 33 | 189 | 7.51e-71 | 231 |
| Msa0643250 | AT2G01940.3 | 61.006 | 159 | 60 | 2 | 39 | 195 | 44 | 202 | 3.95e-67 | 223 |
| Msa0643250 | AT1G25250.1 | 62.585 | 147 | 53 | 2 | 49 | 193 | 20 | 166 | 2.11e-66 | 218 |
| Msa0643250 | AT1G68130.2 | 61.818 | 110 | 41 | 1 | 85 | 193 | 1 | 110 | 8.32e-45 | 160 |
| Msa0643250 | AT2G01940.2 | 61.607 | 112 | 42 | 1 | 85 | 195 | 1 | 112 | 1.35e-44 | 160 |
| Msa0643250 | AT1G25250.2 | 62.162 | 111 | 40 | 2 | 85 | 193 | 1 | 111 | 2.32e-44 | 158 |
| Msa0643250 | AT1G34370.3 | 33.714 | 175 | 103 | 4 | 48 | 209 | 14 | 188 | 2.33e-24 | 103 |
| Msa0643250 | AT1G34370.2 | 33.714 | 175 | 103 | 4 | 48 | 209 | 224 | 398 | 7.56e-24 | 105 |
| Msa0643250 | AT1G34370.1 | 33.714 | 175 | 103 | 4 | 48 | 209 | 224 | 398 | 7.56e-24 | 105 |
| Msa0643250 | AT5G22890.1 | 31.609 | 174 | 106 | 4 | 32 | 192 | 181 | 354 | 3.98e-23 | 101 |
| Msa0643250 | AT1G13290.1 | 30.455 | 220 | 127 | 7 | 12 | 206 | 30 | 248 | 1.66e-22 | 98.2 |
| Msa0643250 | AT1G51220.1 | 32.317 | 164 | 93 | 5 | 62 | 217 | 172 | 325 | 1.07e-19 | 90.9 |
| Msa0643250 | AT1G08290.1 | 38.519 | 135 | 73 | 4 | 67 | 192 | 179 | 312 | 5.92e-19 | 88.6 |
| Msa0643250 | AT3G20880.1 | 35.252 | 139 | 81 | 4 | 62 | 192 | 250 | 387 | 1.04e-18 | 88.6 |
| Msa0643250 | AT1G34790.1 | 36.691 | 139 | 79 | 4 | 62 | 192 | 139 | 276 | 2.00e-18 | 86.3 |
| Msa0643250 | AT3G57670.1 | 35.252 | 139 | 81 | 4 | 62 | 192 | 211 | 348 | 2.34e-18 | 87.4 |
Find 104 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAATAAGTTGGTGAATT+TGG | 0.142711 | 4_3:-45857106 | Msa0643250:CDS |
| CAAGAACTTGGTGAGTTTAA+TGG | 0.196940 | 4_3:-45856835 | Msa0643250:CDS |
| ACAAAATTCTGAATATTTAT+AGG | 0.197521 | 4_3:+45856531 | None:intergenic |
| TTTCAGTTTCACTCAGAATT+TGG | 0.212422 | 4_3:-45857555 | Msa0643250:CDS |
| TTCTGGGCTAATTAAGTAAA+TGG | 0.223061 | 4_3:-45856556 | Msa0643250:three_prime_UTR |
| GCTGGAACTGGATTTGGATT+AGG | 0.245828 | 4_3:+45858764 | None:intergenic |
| TTCTTAGCTGGAACTGGATT+TGG | 0.246398 | 4_3:+45858758 | None:intergenic |
| AGATTGAACTGCATATTTCT+TGG | 0.249648 | 4_3:+45858233 | None:intergenic |
| CTGGAACTGGATTTGGATTA+GGG | 0.258674 | 4_3:+45858765 | None:intergenic |
| CTGGATTTGGATTAGGGTTT+GGG | 0.258906 | 4_3:+45858771 | None:intergenic |
| TCAAATTCAAACAATATGTT+TGG | 0.277577 | 4_3:-45857033 | Msa0643250:CDS |
| GCCGATGAAGCTGCAAATTC+TGG | 0.302791 | 4_3:+45858445 | None:intergenic |
| TTTAATGGAATGGGATCATT+AGG | 0.305018 | 4_3:-45856820 | Msa0643250:CDS |
| TTGGATTAGGGTTTGGGTGT+TGG | 0.305432 | 4_3:+45858777 | None:intergenic |
| AGCTCTCATGGTGCTGGAAT+TGG | 0.305838 | 4_3:+45858817 | None:intergenic |
| CAAAATTCTGAATATTTATA+GGG | 0.311284 | 4_3:+45856532 | None:intergenic |
| TGTGAATGGTACAAAGGATT+TGG | 0.314338 | 4_3:-45857007 | Msa0643250:CDS |
| ATGAACTTGCCTGGTGTTCC+TGG | 0.325816 | 4_3:+45858722 | None:intergenic |
| CCATGAACCTTCTAGAGCTT+TGG | 0.326353 | 4_3:-45858328 | Msa0643250:CDS |
| ACTGGATTTGGATTAGGGTT+TGG | 0.339241 | 4_3:+45858770 | None:intergenic |
| TGTGAACTTAACAAGAGATT+AGG | 0.353034 | 4_3:-45856662 | Msa0643250:three_prime_UTR |
| CAAATTCAAACAATATGTTT+GGG | 0.356792 | 4_3:-45857032 | Msa0643250:CDS |
| AATAGACAAATGTATGATTC+AGG | 0.359404 | 4_3:-45856949 | Msa0643250:CDS |
| CGAAAGTTGCTTAATGCTGC+TGG | 0.361684 | 4_3:+45857633 | None:intergenic |
| GTGAACTTAACAAGAGATTA+GGG | 0.362228 | 4_3:-45856661 | Msa0643250:three_prime_UTR |
| CATGAACCTTCTAGAGCTTT+GGG | 0.370674 | 4_3:-45858327 | Msa0643250:CDS |
| TCTAAATTGTAGTTTGATAG+TGG | 0.384198 | 4_3:-45856624 | Msa0643250:three_prime_UTR |
| GAGATTAGGGATTTCTATCA+TGG | 0.390793 | 4_3:-45856648 | Msa0643250:three_prime_UTR |
| AGCAATAGCAGCACCAATCT+TGG | 0.398971 | 4_3:-45857078 | Msa0643250:CDS |
| AATCTCTCGTAAAACCCATT+TGG | 0.399191 | 4_3:+45856905 | None:intergenic |
| GTTGTTACTGACAAGTGATT+TGG | 0.406986 | 4_3:+45857273 | None:intergenic |
| CCAAAGCTCTAGAAGGTTCA+TGG | 0.410521 | 4_3:+45858328 | None:intergenic |
| AATAATCTCCAGAGCCAGTA+TGG | 0.415643 | 4_3:-45856796 | Msa0643250:CDS |
| CTTGGTGAGTTTAATGGAAT+GGG | 0.417145 | 4_3:-45856829 | Msa0643250:CDS |
| CCATGTAGCATTGGCAAAGA+TGG | 0.419067 | 4_3:+45857396 | None:intergenic |
| GAAGACTGTGTTATTATCAT+TGG | 0.421766 | 4_3:+45857200 | None:intergenic |
| GCTGCAAATTCTGGTCTCTC+TGG | 0.424694 | 4_3:+45858454 | None:intergenic |
| AATATGCAGTTCAATCTGAT+TGG | 0.433651 | 4_3:-45858227 | Msa0643250:CDS |
| GGAATGAGGTGAAACTGAAA+AGG | 0.435372 | 4_3:+45858838 | None:intergenic |
| CCACTTTCACATTGTTAATG+AGG | 0.436319 | 4_3:-45857166 | Msa0643250:CDS |
| AAATCTCCCAAAGCTCTAGA+AGG | 0.438385 | 4_3:+45858321 | None:intergenic |
| GCTCTTTGCTTCAGCTTCCA+TGG | 0.444326 | 4_3:+45858408 | None:intergenic |
| ATGCAAACAATGGATGTGTT+TGG | 0.447388 | 4_3:-45857456 | Msa0643250:CDS |
| TAAATACCCACCTCCAAGAT+TGG | 0.449616 | 4_3:+45857065 | None:intergenic |
| GTTGCAGAAAGAATCTCAAA+TGG | 0.449863 | 4_3:-45857244 | Msa0643250:CDS |
| CAAAGATCAAATTCGAAAGA+AGG | 0.450162 | 4_3:-45858382 | Msa0643250:CDS |
| TTATGTGAAATCTGCAACAA+GGG | 0.451384 | 4_3:-45858480 | Msa0643250:CDS |
| TATGTCACCAAAGTCATTGA+TGG | 0.456254 | 4_3:-45858517 | Msa0643250:CDS |
| TTTGCTTCAGCTTCCATGGT+AGG | 0.459248 | 4_3:+45858412 | None:intergenic |
| ACTTGGTGAGTTTAATGGAA+TGG | 0.460921 | 4_3:-45856830 | Msa0643250:CDS |
| AGTAGTGTCCACCACCATAC+TGG | 0.466451 | 4_3:+45856782 | None:intergenic |
| GAAAACATGGTGAGAAGAAG+TGG | 0.467136 | 4_3:-45858272 | Msa0643250:CDS |
| TTCATTACTCCATGTAGCAT+TGG | 0.470776 | 4_3:+45857387 | None:intergenic |
| CCTCATTAACAATGTGAAAG+TGG | 0.472482 | 4_3:+45857166 | None:intergenic |
| CCATCTTTGCCAATGCTACA+TGG | 0.474776 | 4_3:-45857396 | Msa0643250:CDS |
| TTTGTCGCCATCAATGACTT+TGG | 0.484591 | 4_3:+45858510 | None:intergenic |
| ATTTGATGAGGAAGCTCTCA+TGG | 0.486833 | 4_3:+45858805 | None:intergenic |
| ATGCTAAAGGAAAATATCAC+AGG | 0.487164 | 4_3:+45856471 | None:intergenic |
| ACCAGAATTTGCAGCTTCAT+CGG | 0.488033 | 4_3:-45858446 | Msa0643250:CDS |
| ATAGCAACCACTTCTGATTC+CGG | 0.489329 | 4_3:+45858537 | None:intergenic |
| TGAGGAAGCTCTCATGGTGC+TGG | 0.495516 | 4_3:+45858811 | None:intergenic |
| TGGTGCACACAAGTCTTCTC+AGG | 0.500242 | 4_3:+45858348 | None:intergenic |
| AGAGCTTTGGGAGATTTGAC+AGG | 0.501432 | 4_3:-45858315 | Msa0643250:CDS |
| AGCAGCACCAATCTTGGAGG+TGG | 0.501855 | 4_3:-45857072 | Msa0643250:CDS |
| AAAGCTCATAGCAAGATTTG+TGG | 0.506969 | 4_3:-45858204 | Msa0643250:CDS |
| TGCAGATTTCACATAAGAAA+CGG | 0.507472 | 4_3:+45858487 | None:intergenic |
| GTCCACCACCATACTGGCTC+TGG | 0.507855 | 4_3:+45856788 | None:intergenic |
| GAATAAGTTGGTGAATTTGG+AGG | 0.513790 | 4_3:-45857103 | Msa0643250:CDS |
| AACATCATCAGAACCACCAT+TGG | 0.518482 | 4_3:-45857523 | Msa0643250:CDS |
| AATATGTTTGGGATTGTGAA+TGG | 0.518566 | 4_3:-45857021 | Msa0643250:CDS |
| CTCCAGAGCCAGTATGGTGG+TGG | 0.533266 | 4_3:-45856790 | Msa0643250:CDS |
| AAATGTATGATTCAGGTTCA+AGG | 0.535524 | 4_3:-45856942 | Msa0643250:CDS |
| TTCTGATATAATGCAAACAA+TGG | 0.536311 | 4_3:-45857466 | Msa0643250:CDS |
| AATAAGTTGGTGAATTTGGA+GGG | 0.537676 | 4_3:-45857102 | Msa0643250:CDS |
| TTGCAGAAAGAATCTCAAAT+GGG | 0.545569 | 4_3:-45857243 | Msa0643250:CDS |
| TACAAAGGATTTGGAACATG+TGG | 0.546663 | 4_3:-45856998 | Msa0643250:CDS |
| ACTTGCCTGGTGTTCCTGGT+AGG | 0.547354 | 4_3:+45858726 | None:intergenic |
| CTTATGTGAAATCTGCAACA+AGG | 0.550563 | 4_3:-45858481 | Msa0643250:CDS |
| ACATCATCAGAACCACCATT+GGG | 0.553100 | 4_3:-45857522 | Msa0643250:CDS |
| TAGTTTGATAGTGGTAATTG+TGG | 0.556396 | 4_3:-45856615 | Msa0643250:three_prime_UTR |
| AGAAACCTACCAGGAACACC+AGG | 0.557766 | 4_3:-45858731 | Msa0643250:intron |
| TTAGTGTAATTTCCCAATGG+TGG | 0.567890 | 4_3:+45857510 | None:intergenic |
| TTGTGGTTGCAATGCCGTTG+TGG | 0.590967 | 4_3:-45856598 | Msa0643250:three_prime_UTR |
| GAATGAGGTGAAACTGAAAA+GGG | 0.590975 | 4_3:+45858839 | None:intergenic |
| AATAGCAGCACCAATCTTGG+AGG | 0.592274 | 4_3:-45857075 | Msa0643250:CDS |
| TGGGATTGTGAATGGTACAA+AGG | 0.593396 | 4_3:-45857013 | Msa0643250:CDS |
| AAGTGAAGAGTTGAATAAGT+TGG | 0.597167 | 4_3:-45857115 | Msa0643250:CDS |
| AATCTCAAATGGGATCTACA+AGG | 0.601252 | 4_3:-45857233 | Msa0643250:CDS |
| TCTGAGTGAAACTGAAAACC+AGG | 0.601782 | 4_3:+45857561 | None:intergenic |
| AGAGAGTACAAATGTGATTG+TGG | 0.604424 | 4_3:-45858177 | Msa0643250:CDS |
| GGCGAGGACACAACCTACCA+TGG | 0.608097 | 4_3:-45858425 | Msa0643250:CDS |
| TCCAGATCCGGAATCAGAAG+TGG | 0.621390 | 4_3:-45858544 | Msa0643250:intron |
| GCAGCACCAATCTTGGAGGT+GGG | 0.638474 | 4_3:-45857071 | Msa0643250:CDS |
| GTGTTGGACTTGATTTGATG+AGG | 0.644794 | 4_3:+45858793 | None:intergenic |
| AAACATTATAGTAGAAAACA+TGG | 0.647572 | 4_3:-45858285 | Msa0643250:CDS |
| ATGTTAGTGTAATTTCCCAA+TGG | 0.651961 | 4_3:+45857507 | None:intergenic |
| TGCTAAAGGAAAATATCACA+GGG | 0.654134 | 4_3:+45856472 | None:intergenic |
| AATTTGCAGCTTCATCGGCG+AGG | 0.683827 | 4_3:-45858441 | Msa0643250:CDS |
| ATGGTGCTGGAATTGGAATG+AGG | 0.685103 | 4_3:+45858824 | None:intergenic |
| AATCTCCAGAGCCAGTATGG+TGG | 0.695447 | 4_3:-45856793 | Msa0643250:CDS |
| TTATTATAATTCAGCCACTG+TGG | 0.703090 | 4_3:+45857426 | None:intergenic |
| ATTAGATTAGGGCTCCACAA+CGG | 0.703546 | 4_3:+45856584 | None:intergenic |
| ACAAAGTGCAAAGATAACAA+CGG | 0.712713 | 4_3:-45857658 | Msa0643250:CDS |
| TGTTTGGATCACAACCACAG+TGG | 0.860213 | 4_3:-45857440 | Msa0643250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAACTTAATGTATTTAGA+AGG | + | chr4_3:45857474-45857493 | None:intergenic | 15.0% |
| !!! | TTTGGAATAAATAATAAATG+AGG | - | chr4_3:45857540-45857559 | Msa0643250:CDS | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | + | chr4_3:45858804-45858823 | None:intergenic | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | + | chr4_3:45858805-45858824 | None:intergenic | 15.0% |
| !!! | TTTAACTTAATGTATTTAGA+AGG | + | chr4_3:45857474-45857493 | None:intergenic | 15.0% |
| !!! | TTTGGAATAAATAATAAATG+AGG | - | chr4_3:45857540-45857559 | Msa0643250:CDS | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | + | chr4_3:45858804-45858823 | None:intergenic | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | + | chr4_3:45858805-45858824 | None:intergenic | 15.0% |
| !! | TAATGATATATAGAAGAGAA+AGG | + | chr4_3:45856657-45856676 | None:intergenic | 20.0% |
| !! | AAACATTATAGTAGAAAACA+TGG | - | chr4_3:45857048-45857067 | Msa0643250:CDS | 20.0% |
| !! | AGATAGTAAATATATATACC+TGG | + | chr4_3:45857193-45857212 | None:intergenic | 20.0% |
| !! | CCATTAAAATCATGAAATTA+AGG | + | chr4_3:45857361-45857380 | None:intergenic | 20.0% |
| !!! | CCTTAATTTCATGATTTTAA+TGG | - | chr4_3:45857358-45857377 | Msa0643250:CDS | 20.0% |
| !!! | TAATTTCATGATTTTAATGG+CGG | - | chr4_3:45857361-45857380 | Msa0643250:CDS | 20.0% |
| !! | TCAAATTCAAACAATATGTT+TGG | - | chr4_3:45858300-45858319 | Msa0643250:CDS | 20.0% |
| !! | CAAATTCAAACAATATGTTT+GGG | - | chr4_3:45858301-45858320 | Msa0643250:CDS | 20.0% |
| !! | TCAAAAGAAAAAAACCAAAT+GGG | - | chr4_3:45858414-45858433 | Msa0643250:CDS | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr4_3:45858836-45858855 | None:intergenic | 20.0% |
| !! | TAATGATATATAGAAGAGAA+AGG | + | chr4_3:45856657-45856676 | None:intergenic | 20.0% |
| !! | AAACATTATAGTAGAAAACA+TGG | - | chr4_3:45857048-45857067 | Msa0643250:CDS | 20.0% |
| !! | AGATAGTAAATATATATACC+TGG | + | chr4_3:45857193-45857212 | None:intergenic | 20.0% |
| !! | CCATTAAAATCATGAAATTA+AGG | + | chr4_3:45857361-45857380 | None:intergenic | 20.0% |
| !!! | CCTTAATTTCATGATTTTAA+TGG | - | chr4_3:45857358-45857377 | Msa0643250:CDS | 20.0% |
| !!! | TAATTTCATGATTTTAATGG+CGG | - | chr4_3:45857361-45857380 | Msa0643250:CDS | 20.0% |
| !! | TCAAATTCAAACAATATGTT+TGG | - | chr4_3:45858300-45858319 | Msa0643250:CDS | 20.0% |
| !! | CAAATTCAAACAATATGTTT+GGG | - | chr4_3:45858301-45858320 | Msa0643250:CDS | 20.0% |
| !! | TCAAAAGAAAAAAACCAAAT+GGG | - | chr4_3:45858414-45858433 | Msa0643250:CDS | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr4_3:45858836-45858855 | None:intergenic | 20.0% |
| !!! | CAATTTCACAACTACTTTTT+CGG | + | chr4_3:45857408-45857427 | None:intergenic | 25.0% |
| ! | TAATTGAAGGAATGTTTGTT+TGG | - | chr4_3:45857522-45857541 | Msa0643250:CDS | 25.0% |
| ! | ATTATGTGTGTTAACAAATC+AGG | - | chr4_3:45857605-45857624 | Msa0643250:CDS | 25.0% |
| ! | TTCTGATATAATGCAAACAA+TGG | - | chr4_3:45857867-45857886 | Msa0643250:intron | 25.0% |
| ! | AATAGACAAATGTATGATTC+AGG | - | chr4_3:45858384-45858403 | Msa0643250:CDS | 25.0% |
| ! | GTCAAAAGAAAAAAACCAAA+TGG | - | chr4_3:45858413-45858432 | Msa0643250:CDS | 25.0% |
| ! | TCTAAATTGTAGTTTGATAG+TGG | - | chr4_3:45858709-45858728 | Msa0643250:intron | 25.0% |
| ! | CCAGAACAAAAATTAGATTA+GGG | + | chr4_3:45858763-45858782 | None:intergenic | 25.0% |
| !! | CCTAATCTAATTTTTGTTCT+GGG | - | chr4_3:45858761-45858780 | Msa0643250:CDS | 25.0% |
| !!! | CAATTTCACAACTACTTTTT+CGG | + | chr4_3:45857408-45857427 | None:intergenic | 25.0% |
| ! | TAATTGAAGGAATGTTTGTT+TGG | - | chr4_3:45857522-45857541 | Msa0643250:CDS | 25.0% |
| ! | ATTATGTGTGTTAACAAATC+AGG | - | chr4_3:45857605-45857624 | Msa0643250:CDS | 25.0% |
| ! | TTCTGATATAATGCAAACAA+TGG | - | chr4_3:45857867-45857886 | Msa0643250:intron | 25.0% |
| ! | AATAGACAAATGTATGATTC+AGG | - | chr4_3:45858384-45858403 | Msa0643250:CDS | 25.0% |
| ! | GTCAAAAGAAAAAAACCAAA+TGG | - | chr4_3:45858413-45858432 | Msa0643250:CDS | 25.0% |
| ! | TCTAAATTGTAGTTTGATAG+TGG | - | chr4_3:45858709-45858728 | Msa0643250:intron | 25.0% |
| ! | CCAGAACAAAAATTAGATTA+GGG | + | chr4_3:45858763-45858782 | None:intergenic | 25.0% |
| !! | CCTAATCTAATTTTTGTTCT+GGG | - | chr4_3:45858761-45858780 | Msa0643250:CDS | 25.0% |
| !!! | AGGTTTCTTTTTTTCTTAGC+TGG | + | chr4_3:45856590-45856609 | None:intergenic | 30.0% |
| AAGAAAAAAAGAAACCTACC+AGG | - | chr4_3:45856593-45856612 | Msa0643250:three_prime_UTR | 30.0% | |
| TATTACTAAATGAACTTGCC+TGG | + | chr4_3:45856623-45856642 | None:intergenic | 30.0% | |
| TGCAGATTTCACATAAGAAA+CGG | + | chr4_3:45856849-45856868 | None:intergenic | 30.0% | |
| TTATGTGAAATCTGCAACAA+GGG | - | chr4_3:45856853-45856872 | Msa0643250:CDS | 30.0% | |
| CAAAGATCAAATTCGAAAGA+AGG | - | chr4_3:45856951-45856970 | Msa0643250:CDS | 30.0% | |
| AGATTGAACTGCATATTTCT+TGG | + | chr4_3:45857103-45857122 | None:intergenic | 30.0% | |
| AATATGCAGTTCAATCTGAT+TGG | - | chr4_3:45857106-45857125 | Msa0643250:CDS | 30.0% | |
| CGAAAAAGTAGTTGTGAAAT+TGG | - | chr4_3:45857406-45857425 | Msa0643250:CDS | 30.0% | |
| AAAAGTAGTTGTGAAATTGG+TGG | - | chr4_3:45857409-45857428 | Msa0643250:CDS | 30.0% | |
| AAAGTAGTTGTGAAATTGGT+GGG | - | chr4_3:45857410-45857429 | Msa0643250:CDS | 30.0% | |
| TTTAAATTGCAGCAGTCTAA+AGG | + | chr4_3:45857449-45857468 | None:intergenic | 30.0% | |
| CATGTGACAGATATAATTGA+AGG | - | chr4_3:45857509-45857528 | Msa0643250:CDS | 30.0% | |
| ACAAAGTGCAAAGATAACAA+CGG | - | chr4_3:45857675-45857694 | Msa0643250:CDS | 30.0% | |
| GGAAAAATATGAGGAATTCT+TGG | + | chr4_3:45857754-45857773 | None:intergenic | 30.0% | |
| ! | AGAATTCCTCATATTTTTCC+TGG | - | chr4_3:45857754-45857773 | Msa0643250:intron | 30.0% |
| TGAAAACCAGGAAAAATATG+AGG | + | chr4_3:45857763-45857782 | None:intergenic | 30.0% | |
| TTTCAGTTTCACTCAGAATT+TGG | - | chr4_3:45857778-45857797 | Msa0643250:intron | 30.0% | |
| ATGTTAGTGTAATTTCCCAA+TGG | + | chr4_3:45857829-45857848 | None:intergenic | 30.0% | |
| TTATTATAATTCAGCCACTG+TGG | + | chr4_3:45857910-45857929 | None:intergenic | 30.0% | |
| TTGCAGAAAGAATCTCAAAT+GGG | - | chr4_3:45858090-45858109 | Msa0643250:intron | 30.0% | |
| ! | GAAGACTGTGTTATTATCAT+TGG | + | chr4_3:45858136-45858155 | None:intergenic | 30.0% |
| AAGTGAAGAGTTGAATAAGT+TGG | - | chr4_3:45858218-45858237 | Msa0643250:CDS | 30.0% | |
| !! | GTTGAATAAGTTGGTGAATT+TGG | - | chr4_3:45858227-45858246 | Msa0643250:CDS | 30.0% |
| !! | AATAAGTTGGTGAATTTGGA+GGG | - | chr4_3:45858231-45858250 | Msa0643250:CDS | 30.0% |
| ! | AATATGTTTGGGATTGTGAA+TGG | - | chr4_3:45858312-45858331 | Msa0643250:CDS | 30.0% |
| ! | AAATGTATGATTCAGGTTCA+AGG | - | chr4_3:45858391-45858410 | Msa0643250:CDS | 30.0% |
| ! | GTTTTACGAGAGATTTTCTT+GGG | - | chr4_3:45858436-45858455 | Msa0643250:CDS | 30.0% |
| ! | TTTTACGAGAGATTTTCTTG+GGG | - | chr4_3:45858437-45858456 | Msa0643250:CDS | 30.0% |
| TTTAATGGAATGGGATCATT+AGG | - | chr4_3:45858513-45858532 | Msa0643250:CDS | 30.0% | |
| TGTGAACTTAACAAGAGATT+AGG | - | chr4_3:45858671-45858690 | Msa0643250:intron | 30.0% | |
| GTGAACTTAACAAGAGATTA+GGG | - | chr4_3:45858672-45858691 | Msa0643250:intron | 30.0% | |
| !! | TAGTTTGATAGTGGTAATTG+TGG | - | chr4_3:45858718-45858737 | Msa0643250:intron | 30.0% |
| ! | CCCTAATCTAATTTTTGTTC+TGG | - | chr4_3:45858760-45858779 | Msa0643250:CDS | 30.0% |
| CCCAGAACAAAAATTAGATT+AGG | + | chr4_3:45858764-45858783 | None:intergenic | 30.0% | |
| TTCTGGGCTAATTAAGTAAA+TGG | - | chr4_3:45858777-45858796 | Msa0643250:CDS | 30.0% | |
| !!! | AGGTTTCTTTTTTTCTTAGC+TGG | + | chr4_3:45856590-45856609 | None:intergenic | 30.0% |
| AAGAAAAAAAGAAACCTACC+AGG | - | chr4_3:45856593-45856612 | Msa0643250:three_prime_UTR | 30.0% | |
| TATTACTAAATGAACTTGCC+TGG | + | chr4_3:45856623-45856642 | None:intergenic | 30.0% | |
| TGCAGATTTCACATAAGAAA+CGG | + | chr4_3:45856849-45856868 | None:intergenic | 30.0% | |
| TTATGTGAAATCTGCAACAA+GGG | - | chr4_3:45856853-45856872 | Msa0643250:CDS | 30.0% | |
| CAAAGATCAAATTCGAAAGA+AGG | - | chr4_3:45856951-45856970 | Msa0643250:CDS | 30.0% | |
| AGATTGAACTGCATATTTCT+TGG | + | chr4_3:45857103-45857122 | None:intergenic | 30.0% | |
| AATATGCAGTTCAATCTGAT+TGG | - | chr4_3:45857106-45857125 | Msa0643250:CDS | 30.0% | |
| CGAAAAAGTAGTTGTGAAAT+TGG | - | chr4_3:45857406-45857425 | Msa0643250:CDS | 30.0% | |
| AAAAGTAGTTGTGAAATTGG+TGG | - | chr4_3:45857409-45857428 | Msa0643250:CDS | 30.0% | |
| AAAGTAGTTGTGAAATTGGT+GGG | - | chr4_3:45857410-45857429 | Msa0643250:CDS | 30.0% | |
| TTTAAATTGCAGCAGTCTAA+AGG | + | chr4_3:45857449-45857468 | None:intergenic | 30.0% | |
| CATGTGACAGATATAATTGA+AGG | - | chr4_3:45857509-45857528 | Msa0643250:CDS | 30.0% | |
| ACAAAGTGCAAAGATAACAA+CGG | - | chr4_3:45857675-45857694 | Msa0643250:CDS | 30.0% | |
| GGAAAAATATGAGGAATTCT+TGG | + | chr4_3:45857754-45857773 | None:intergenic | 30.0% | |
| ! | AGAATTCCTCATATTTTTCC+TGG | - | chr4_3:45857754-45857773 | Msa0643250:intron | 30.0% |
| TGAAAACCAGGAAAAATATG+AGG | + | chr4_3:45857763-45857782 | None:intergenic | 30.0% | |
| TTTCAGTTTCACTCAGAATT+TGG | - | chr4_3:45857778-45857797 | Msa0643250:intron | 30.0% | |
| ATGTTAGTGTAATTTCCCAA+TGG | + | chr4_3:45857829-45857848 | None:intergenic | 30.0% | |
| TTATTATAATTCAGCCACTG+TGG | + | chr4_3:45857910-45857929 | None:intergenic | 30.0% | |
| TTGCAGAAAGAATCTCAAAT+GGG | - | chr4_3:45858090-45858109 | Msa0643250:intron | 30.0% | |
| ! | GAAGACTGTGTTATTATCAT+TGG | + | chr4_3:45858136-45858155 | None:intergenic | 30.0% |
| AAGTGAAGAGTTGAATAAGT+TGG | - | chr4_3:45858218-45858237 | Msa0643250:CDS | 30.0% | |
| !! | GTTGAATAAGTTGGTGAATT+TGG | - | chr4_3:45858227-45858246 | Msa0643250:CDS | 30.0% |
| !! | AATAAGTTGGTGAATTTGGA+GGG | - | chr4_3:45858231-45858250 | Msa0643250:CDS | 30.0% |
| ! | AATATGTTTGGGATTGTGAA+TGG | - | chr4_3:45858312-45858331 | Msa0643250:CDS | 30.0% |
| ! | AAATGTATGATTCAGGTTCA+AGG | - | chr4_3:45858391-45858410 | Msa0643250:CDS | 30.0% |
| ! | GTTTTACGAGAGATTTTCTT+GGG | - | chr4_3:45858436-45858455 | Msa0643250:CDS | 30.0% |
| ! | TTTTACGAGAGATTTTCTTG+GGG | - | chr4_3:45858437-45858456 | Msa0643250:CDS | 30.0% |
| TTTAATGGAATGGGATCATT+AGG | - | chr4_3:45858513-45858532 | Msa0643250:CDS | 30.0% | |
| TGTGAACTTAACAAGAGATT+AGG | - | chr4_3:45858671-45858690 | Msa0643250:intron | 30.0% | |
| GTGAACTTAACAAGAGATTA+GGG | - | chr4_3:45858672-45858691 | Msa0643250:intron | 30.0% | |
| !! | TAGTTTGATAGTGGTAATTG+TGG | - | chr4_3:45858718-45858737 | Msa0643250:intron | 30.0% |
| ! | CCCTAATCTAATTTTTGTTC+TGG | - | chr4_3:45858760-45858779 | Msa0643250:CDS | 30.0% |
| CCCAGAACAAAAATTAGATT+AGG | + | chr4_3:45858764-45858783 | None:intergenic | 30.0% | |
| TTCTGGGCTAATTAAGTAAA+TGG | - | chr4_3:45858777-45858796 | Msa0643250:CDS | 30.0% | |
| GAATGAGGTGAAACTGAAAA+GGG | + | chr4_3:45856497-45856516 | None:intergenic | 35.0% | |
| !!! | CTTTTTTTCTTAGCTGGAAC+TGG | + | chr4_3:45856584-45856603 | None:intergenic | 35.0% |
| TATGTCACCAAAGTCATTGA+TGG | - | chr4_3:45856816-45856835 | Msa0643250:CDS | 35.0% | |
| CTTATGTGAAATCTGCAACA+AGG | - | chr4_3:45856852-45856871 | Msa0643250:CDS | 35.0% | |
| AAAGCTCATAGCAAGATTTG+TGG | - | chr4_3:45857129-45857148 | Msa0643250:CDS | 35.0% | |
| ! | AGAGAGTACAAATGTGATTG+TGG | - | chr4_3:45857156-45857175 | Msa0643250:CDS | 35.0% |
| !!! | AACTACTTTTTCGGTTGCAT+TGG | + | chr4_3:45857399-45857418 | None:intergenic | 35.0% |
| AAGTAGTTGTGAAATTGGTG+GGG | - | chr4_3:45857411-45857430 | Msa0643250:CDS | 35.0% | |
| TGTGTGTTAACAAATCAGGA+AGG | - | chr4_3:45857609-45857628 | Msa0643250:CDS | 35.0% | |
| TTAGTGTAATTTCCCAATGG+TGG | + | chr4_3:45857826-45857845 | None:intergenic | 35.0% | |
| ATGCAAACAATGGATGTGTT+TGG | - | chr4_3:45857877-45857896 | Msa0643250:intron | 35.0% | |
| TTCATTACTCCATGTAGCAT+TGG | + | chr4_3:45857949-45857968 | None:intergenic | 35.0% | |
| GTTGTTACTGACAAGTGATT+TGG | + | chr4_3:45858063-45858082 | None:intergenic | 35.0% | |
| GTTGCAGAAAGAATCTCAAA+TGG | - | chr4_3:45858089-45858108 | Msa0643250:intron | 35.0% | |
| AATCTCAAATGGGATCTACA+AGG | - | chr4_3:45858100-45858119 | Msa0643250:intron | 35.0% | |
| CCTCATTAACAATGTGAAAG+TGG | + | chr4_3:45858170-45858189 | None:intergenic | 35.0% | |
| CCACTTTCACATTGTTAATG+AGG | - | chr4_3:45858167-45858186 | Msa0643250:CDS | 35.0% | |
| !! | GAATAAGTTGGTGAATTTGG+AGG | - | chr4_3:45858230-45858249 | Msa0643250:CDS | 35.0% |
| TGTGAATGGTACAAAGGATT+TGG | - | chr4_3:45858326-45858345 | Msa0643250:CDS | 35.0% | |
| ! | TACAAAGGATTTGGAACATG+TGG | - | chr4_3:45858335-45858354 | Msa0643250:CDS | 35.0% |
| AATCTCTCGTAAAACCCATT+TGG | + | chr4_3:45858431-45858450 | None:intergenic | 35.0% | |
| ! | GGTTTTACGAGAGATTTTCT+TGG | - | chr4_3:45858435-45858454 | Msa0643250:CDS | 35.0% |
| ! | CAAGAACTTGGTGAGTTTAA+TGG | - | chr4_3:45858498-45858517 | Msa0643250:CDS | 35.0% |
| ! | ACTTGGTGAGTTTAATGGAA+TGG | - | chr4_3:45858503-45858522 | Msa0643250:CDS | 35.0% |
| CTTGGTGAGTTTAATGGAAT+GGG | - | chr4_3:45858504-45858523 | Msa0643250:CDS | 35.0% | |
| GAGATTAGGGATTTCTATCA+TGG | - | chr4_3:45858685-45858704 | Msa0643250:intron | 35.0% | |
| AAAGGGTTGTTTAGACATCA+TGG | + | chr4_3:45856480-45856499 | None:intergenic | 35.0% | |
| GAATGAGGTGAAACTGAAAA+GGG | + | chr4_3:45856497-45856516 | None:intergenic | 35.0% | |
| !!! | CTTTTTTTCTTAGCTGGAAC+TGG | + | chr4_3:45856584-45856603 | None:intergenic | 35.0% |
| TATGTCACCAAAGTCATTGA+TGG | - | chr4_3:45856816-45856835 | Msa0643250:CDS | 35.0% | |
| CTTATGTGAAATCTGCAACA+AGG | - | chr4_3:45856852-45856871 | Msa0643250:CDS | 35.0% | |
| AAAGCTCATAGCAAGATTTG+TGG | - | chr4_3:45857129-45857148 | Msa0643250:CDS | 35.0% | |
| ! | AGAGAGTACAAATGTGATTG+TGG | - | chr4_3:45857156-45857175 | Msa0643250:CDS | 35.0% |
| !!! | AACTACTTTTTCGGTTGCAT+TGG | + | chr4_3:45857399-45857418 | None:intergenic | 35.0% |
| AAGTAGTTGTGAAATTGGTG+GGG | - | chr4_3:45857411-45857430 | Msa0643250:CDS | 35.0% | |
| TGTGTGTTAACAAATCAGGA+AGG | - | chr4_3:45857609-45857628 | Msa0643250:CDS | 35.0% | |
| TTAGTGTAATTTCCCAATGG+TGG | + | chr4_3:45857826-45857845 | None:intergenic | 35.0% | |
| ATGCAAACAATGGATGTGTT+TGG | - | chr4_3:45857877-45857896 | Msa0643250:intron | 35.0% | |
| TTCATTACTCCATGTAGCAT+TGG | + | chr4_3:45857949-45857968 | None:intergenic | 35.0% | |
| GTTGTTACTGACAAGTGATT+TGG | + | chr4_3:45858063-45858082 | None:intergenic | 35.0% | |
| GTTGCAGAAAGAATCTCAAA+TGG | - | chr4_3:45858089-45858108 | Msa0643250:intron | 35.0% | |
| AATCTCAAATGGGATCTACA+AGG | - | chr4_3:45858100-45858119 | Msa0643250:intron | 35.0% | |
| CCTCATTAACAATGTGAAAG+TGG | + | chr4_3:45858170-45858189 | None:intergenic | 35.0% | |
| CCACTTTCACATTGTTAATG+AGG | - | chr4_3:45858167-45858186 | Msa0643250:CDS | 35.0% | |
| !! | GAATAAGTTGGTGAATTTGG+AGG | - | chr4_3:45858230-45858249 | Msa0643250:CDS | 35.0% |
| TGTGAATGGTACAAAGGATT+TGG | - | chr4_3:45858326-45858345 | Msa0643250:CDS | 35.0% | |
| ! | TACAAAGGATTTGGAACATG+TGG | - | chr4_3:45858335-45858354 | Msa0643250:CDS | 35.0% |
| AATCTCTCGTAAAACCCATT+TGG | + | chr4_3:45858431-45858450 | None:intergenic | 35.0% | |
| ! | GGTTTTACGAGAGATTTTCT+TGG | - | chr4_3:45858435-45858454 | Msa0643250:CDS | 35.0% |
| ! | CAAGAACTTGGTGAGTTTAA+TGG | - | chr4_3:45858498-45858517 | Msa0643250:CDS | 35.0% |
| ! | ACTTGGTGAGTTTAATGGAA+TGG | - | chr4_3:45858503-45858522 | Msa0643250:CDS | 35.0% |
| CTTGGTGAGTTTAATGGAAT+GGG | - | chr4_3:45858504-45858523 | Msa0643250:CDS | 35.0% | |
| GAGATTAGGGATTTCTATCA+TGG | - | chr4_3:45858685-45858704 | Msa0643250:intron | 35.0% | |
| GGAATGAGGTGAAACTGAAA+AGG | + | chr4_3:45856498-45856517 | None:intergenic | 40.0% | |
| ATTTGATGAGGAAGCTCTCA+TGG | + | chr4_3:45856531-45856550 | None:intergenic | 40.0% | |
| ! | GTGTTGGACTTGATTTGATG+AGG | + | chr4_3:45856543-45856562 | None:intergenic | 40.0% |
| ! | CTGGATTTGGATTAGGGTTT+GGG | + | chr4_3:45856565-45856584 | None:intergenic | 40.0% |
| ! | ACTGGATTTGGATTAGGGTT+TGG | + | chr4_3:45856566-45856585 | None:intergenic | 40.0% |
| CTGGAACTGGATTTGGATTA+GGG | + | chr4_3:45856571-45856590 | None:intergenic | 40.0% | |
| TTCTTAGCTGGAACTGGATT+TGG | + | chr4_3:45856578-45856597 | None:intergenic | 40.0% | |
| CACATGAATGAATCCAGATC+CGG | - | chr4_3:45856777-45856796 | Msa0643250:CDS | 40.0% | |
| ATAGCAACCACTTCTGATTC+CGG | + | chr4_3:45856799-45856818 | None:intergenic | 40.0% | |
| TTTGTCGCCATCAATGACTT+TGG | + | chr4_3:45856826-45856845 | None:intergenic | 40.0% | |
| ACCAGAATTTGCAGCTTCAT+CGG | - | chr4_3:45856887-45856906 | Msa0643250:CDS | 40.0% | |
| !! | CATGAACCTTCTAGAGCTTT+GGG | - | chr4_3:45857006-45857025 | Msa0643250:CDS | 40.0% |
| !! | AAATCTCCCAAAGCTCTAGA+AGG | + | chr4_3:45857015-45857034 | None:intergenic | 40.0% |
| GAAAACATGGTGAGAAGAAG+TGG | - | chr4_3:45857061-45857080 | Msa0643250:CDS | 40.0% | |
| ! | ATTGTGGCACAATTTTCTCC+AGG | - | chr4_3:45857172-45857191 | Msa0643250:CDS | 40.0% |
| TCTCAAATCCAACGTGTTCT+TGG | + | chr4_3:45857232-45857251 | None:intergenic | 40.0% | |
| TCAGTAGTGGCTGCAATATA+CGG | - | chr4_3:45857286-45857305 | Msa0643250:CDS | 40.0% | |
| TCTGAGTGAAACTGAAAACC+AGG | + | chr4_3:45857775-45857794 | None:intergenic | 40.0% | |
| AACATCATCAGAACCACCAT+TGG | - | chr4_3:45857810-45857829 | Msa0643250:intron | 40.0% | |
| ACATCATCAGAACCACCATT+GGG | - | chr4_3:45857811-45857830 | Msa0643250:intron | 40.0% | |
| TAAATACCCACCTCCAAGAT+TGG | + | chr4_3:45858271-45858290 | None:intergenic | 40.0% | |
| TGGGATTGTGAATGGTACAA+AGG | - | chr4_3:45858320-45858339 | Msa0643250:CDS | 40.0% | |
| CCAAGTTCTTGCTGCAAAAA+AGG | + | chr4_3:45858489-45858508 | None:intergenic | 40.0% | |
| !!! | CCTTTTTTGCAGCAAGAACT+TGG | - | chr4_3:45858486-45858505 | Msa0643250:CDS | 40.0% |
| AATAATCTCCAGAGCCAGTA+TGG | - | chr4_3:45858537-45858556 | Msa0643250:CDS | 40.0% | |
| ATTAGATTAGGGCTCCACAA+CGG | + | chr4_3:45858752-45858771 | None:intergenic | 40.0% | |
| GGAATGAGGTGAAACTGAAA+AGG | + | chr4_3:45856498-45856517 | None:intergenic | 40.0% | |
| ATTTGATGAGGAAGCTCTCA+TGG | + | chr4_3:45856531-45856550 | None:intergenic | 40.0% | |
| ! | GTGTTGGACTTGATTTGATG+AGG | + | chr4_3:45856543-45856562 | None:intergenic | 40.0% |
| ! | CTGGATTTGGATTAGGGTTT+GGG | + | chr4_3:45856565-45856584 | None:intergenic | 40.0% |
| ! | ACTGGATTTGGATTAGGGTT+TGG | + | chr4_3:45856566-45856585 | None:intergenic | 40.0% |
| CTGGAACTGGATTTGGATTA+GGG | + | chr4_3:45856571-45856590 | None:intergenic | 40.0% | |
| TTCTTAGCTGGAACTGGATT+TGG | + | chr4_3:45856578-45856597 | None:intergenic | 40.0% | |
| CACATGAATGAATCCAGATC+CGG | - | chr4_3:45856777-45856796 | Msa0643250:CDS | 40.0% | |
| ATAGCAACCACTTCTGATTC+CGG | + | chr4_3:45856799-45856818 | None:intergenic | 40.0% | |
| TTTGTCGCCATCAATGACTT+TGG | + | chr4_3:45856826-45856845 | None:intergenic | 40.0% | |
| ACCAGAATTTGCAGCTTCAT+CGG | - | chr4_3:45856887-45856906 | Msa0643250:CDS | 40.0% | |
| !! | CATGAACCTTCTAGAGCTTT+GGG | - | chr4_3:45857006-45857025 | Msa0643250:CDS | 40.0% |
| !! | AAATCTCCCAAAGCTCTAGA+AGG | + | chr4_3:45857015-45857034 | None:intergenic | 40.0% |
| GAAAACATGGTGAGAAGAAG+TGG | - | chr4_3:45857061-45857080 | Msa0643250:CDS | 40.0% | |
| ! | ATTGTGGCACAATTTTCTCC+AGG | - | chr4_3:45857172-45857191 | Msa0643250:CDS | 40.0% |
| TCTCAAATCCAACGTGTTCT+TGG | + | chr4_3:45857232-45857251 | None:intergenic | 40.0% | |
| TCAGTAGTGGCTGCAATATA+CGG | - | chr4_3:45857286-45857305 | Msa0643250:CDS | 40.0% | |
| TCTGAGTGAAACTGAAAACC+AGG | + | chr4_3:45857775-45857794 | None:intergenic | 40.0% | |
| AACATCATCAGAACCACCAT+TGG | - | chr4_3:45857810-45857829 | Msa0643250:intron | 40.0% | |
| ACATCATCAGAACCACCATT+GGG | - | chr4_3:45857811-45857830 | Msa0643250:intron | 40.0% | |
| TAAATACCCACCTCCAAGAT+TGG | + | chr4_3:45858271-45858290 | None:intergenic | 40.0% | |
| TGGGATTGTGAATGGTACAA+AGG | - | chr4_3:45858320-45858339 | Msa0643250:CDS | 40.0% | |
| CCAAGTTCTTGCTGCAAAAA+AGG | + | chr4_3:45858489-45858508 | None:intergenic | 40.0% | |
| !!! | CCTTTTTTGCAGCAAGAACT+TGG | - | chr4_3:45858486-45858505 | Msa0643250:CDS | 40.0% |
| AATAATCTCCAGAGCCAGTA+TGG | - | chr4_3:45858537-45858556 | Msa0643250:CDS | 40.0% | |
| ATTAGATTAGGGCTCCACAA+CGG | + | chr4_3:45858752-45858771 | None:intergenic | 40.0% | |
| ! | ATGGTGCTGGAATTGGAATG+AGG | + | chr4_3:45856512-45856531 | None:intergenic | 45.0% |
| ! | TTGGATTAGGGTTTGGGTGT+TGG | + | chr4_3:45856559-45856578 | None:intergenic | 45.0% |
| GCTGGAACTGGATTTGGATT+AGG | + | chr4_3:45856572-45856591 | None:intergenic | 45.0% | |
| TTTGCTTCAGCTTCCATGGT+AGG | + | chr4_3:45856924-45856943 | None:intergenic | 45.0% | |
| !! | CCAAAGCTCTAGAAGGTTCA+TGG | + | chr4_3:45857008-45857027 | None:intergenic | 45.0% |
| !! | CCATGAACCTTCTAGAGCTT+TGG | - | chr4_3:45857005-45857024 | Msa0643250:CDS | 45.0% |
| !! | AGAGCTTTGGGAGATTTGAC+AGG | - | chr4_3:45857018-45857037 | Msa0643250:CDS | 45.0% |
| CAGATCCAATGACTCAGTAG+TGG | - | chr4_3:45857273-45857292 | Msa0643250:CDS | 45.0% | |
| TTTAATGGCGGTTGCAATCG+CGG | - | chr4_3:45857373-45857392 | Msa0643250:CDS | 45.0% | |
| CGAAAGTTGCTTAATGCTGC+TGG | + | chr4_3:45857703-45857722 | None:intergenic | 45.0% | |
| TGTTTGGATCACAACCACAG+TGG | - | chr4_3:45857893-45857912 | Msa0643250:intron | 45.0% | |
| !! | CCATGTAGCATTGGCAAAGA+TGG | + | chr4_3:45857940-45857959 | None:intergenic | 45.0% |
| CCATCTTTGCCAATGCTACA+TGG | - | chr4_3:45857937-45857956 | Msa0643250:intron | 45.0% | |
| AGCAATAGCAGCACCAATCT+TGG | - | chr4_3:45858255-45858274 | Msa0643250:CDS | 45.0% | |
| AATAGCAGCACCAATCTTGG+AGG | - | chr4_3:45858258-45858277 | Msa0643250:CDS | 45.0% | |
| !!! | GGAACATGTGGTTTTGTCTG+TGG | - | chr4_3:45858347-45858366 | Msa0643250:CDS | 45.0% |
| ! | ACGAGAGATTTTCTTGGGGT+TGG | - | chr4_3:45858441-45858460 | Msa0643250:CDS | 45.0% |
| ! | ATGGTGCTGGAATTGGAATG+AGG | + | chr4_3:45856512-45856531 | None:intergenic | 45.0% |
| ! | TTGGATTAGGGTTTGGGTGT+TGG | + | chr4_3:45856559-45856578 | None:intergenic | 45.0% |
| GCTGGAACTGGATTTGGATT+AGG | + | chr4_3:45856572-45856591 | None:intergenic | 45.0% | |
| TTTGCTTCAGCTTCCATGGT+AGG | + | chr4_3:45856924-45856943 | None:intergenic | 45.0% | |
| !! | CCAAAGCTCTAGAAGGTTCA+TGG | + | chr4_3:45857008-45857027 | None:intergenic | 45.0% |
| !! | CCATGAACCTTCTAGAGCTT+TGG | - | chr4_3:45857005-45857024 | Msa0643250:CDS | 45.0% |
| !! | AGAGCTTTGGGAGATTTGAC+AGG | - | chr4_3:45857018-45857037 | Msa0643250:CDS | 45.0% |
| CAGATCCAATGACTCAGTAG+TGG | - | chr4_3:45857273-45857292 | Msa0643250:CDS | 45.0% | |
| TTTAATGGCGGTTGCAATCG+CGG | - | chr4_3:45857373-45857392 | Msa0643250:CDS | 45.0% | |
| CGAAAGTTGCTTAATGCTGC+TGG | + | chr4_3:45857703-45857722 | None:intergenic | 45.0% | |
| TGTTTGGATCACAACCACAG+TGG | - | chr4_3:45857893-45857912 | Msa0643250:intron | 45.0% | |
| !! | CCATGTAGCATTGGCAAAGA+TGG | + | chr4_3:45857940-45857959 | None:intergenic | 45.0% |
| CCATCTTTGCCAATGCTACA+TGG | - | chr4_3:45857937-45857956 | Msa0643250:intron | 45.0% | |
| AGCAATAGCAGCACCAATCT+TGG | - | chr4_3:45858255-45858274 | Msa0643250:CDS | 45.0% | |
| AATAGCAGCACCAATCTTGG+AGG | - | chr4_3:45858258-45858277 | Msa0643250:CDS | 45.0% | |
| !!! | GGAACATGTGGTTTTGTCTG+TGG | - | chr4_3:45858347-45858366 | Msa0643250:CDS | 45.0% |
| ! | ACGAGAGATTTTCTTGGGGT+TGG | - | chr4_3:45858441-45858460 | Msa0643250:CDS | 45.0% |
| !! | ATTAAGTTAAATTAATTTAA+TGG | - | chr4_3:45857483-45857502 | Msa0643250:CDS | 5.0% |
| !! | ATTAAGTTAAATTAATTTAA+TGG | - | chr4_3:45857483-45857502 | Msa0643250:CDS | 5.0% |
| ! | AGCTCTCATGGTGCTGGAAT+TGG | + | chr4_3:45856519-45856538 | None:intergenic | 50.0% |
| AGAAACCTACCAGGAACACC+AGG | - | chr4_3:45856602-45856621 | Msa0643250:three_prime_UTR | 50.0% | |
| ATGAACTTGCCTGGTGTTCC+TGG | + | chr4_3:45856614-45856633 | None:intergenic | 50.0% | |
| TCCAGATCCGGAATCAGAAG+TGG | - | chr4_3:45856789-45856808 | Msa0643250:CDS | 50.0% | |
| ACCACTTCTGATTCCGGATC+TGG | + | chr4_3:45856793-45856812 | None:intergenic | 50.0% | |
| GCTGCAAATTCTGGTCTCTC+TGG | + | chr4_3:45856882-45856901 | None:intergenic | 50.0% | |
| GCCGATGAAGCTGCAAATTC+TGG | + | chr4_3:45856891-45856910 | None:intergenic | 50.0% | |
| AATTTGCAGCTTCATCGGCG+AGG | - | chr4_3:45856892-45856911 | Msa0643250:CDS | 50.0% | |
| GCTCTTTGCTTCAGCTTCCA+TGG | + | chr4_3:45856928-45856947 | None:intergenic | 50.0% | |
| TGGTGCACACAAGTCTTCTC+AGG | + | chr4_3:45856988-45857007 | None:intergenic | 50.0% | |
| ! | CGTGTTCTTGGTGACTGCAA+TGG | + | chr4_3:45857220-45857239 | None:intergenic | 50.0% |
| TGCAGTCACCAAGAACACGT+TGG | - | chr4_3:45857221-45857240 | Msa0643250:CDS | 50.0% | |
| TGCAGCCACTACTGAGTCAT+TGG | + | chr4_3:45857281-45857300 | None:intergenic | 50.0% | |
| AATCTCCAGAGCCAGTATGG+TGG | - | chr4_3:45858540-45858559 | Msa0643250:CDS | 50.0% | |
| AGTAGTGTCCACCACCATAC+TGG | + | chr4_3:45858554-45858573 | None:intergenic | 50.0% | |
| TTGTGGTTGCAATGCCGTTG+TGG | - | chr4_3:45858735-45858754 | Msa0643250:CDS | 50.0% | |
| ! | AGCTCTCATGGTGCTGGAAT+TGG | + | chr4_3:45856519-45856538 | None:intergenic | 50.0% |
| AGAAACCTACCAGGAACACC+AGG | - | chr4_3:45856602-45856621 | Msa0643250:three_prime_UTR | 50.0% | |
| ATGAACTTGCCTGGTGTTCC+TGG | + | chr4_3:45856614-45856633 | None:intergenic | 50.0% | |
| TCCAGATCCGGAATCAGAAG+TGG | - | chr4_3:45856789-45856808 | Msa0643250:CDS | 50.0% | |
| ACCACTTCTGATTCCGGATC+TGG | + | chr4_3:45856793-45856812 | None:intergenic | 50.0% | |
| GCTGCAAATTCTGGTCTCTC+TGG | + | chr4_3:45856882-45856901 | None:intergenic | 50.0% | |
| GCCGATGAAGCTGCAAATTC+TGG | + | chr4_3:45856891-45856910 | None:intergenic | 50.0% | |
| AATTTGCAGCTTCATCGGCG+AGG | - | chr4_3:45856892-45856911 | Msa0643250:CDS | 50.0% | |
| GCTCTTTGCTTCAGCTTCCA+TGG | + | chr4_3:45856928-45856947 | None:intergenic | 50.0% | |
| TGGTGCACACAAGTCTTCTC+AGG | + | chr4_3:45856988-45857007 | None:intergenic | 50.0% | |
| ! | CGTGTTCTTGGTGACTGCAA+TGG | + | chr4_3:45857220-45857239 | None:intergenic | 50.0% |
| TGCAGTCACCAAGAACACGT+TGG | - | chr4_3:45857221-45857240 | Msa0643250:CDS | 50.0% | |
| TGCAGCCACTACTGAGTCAT+TGG | + | chr4_3:45857281-45857300 | None:intergenic | 50.0% | |
| AATCTCCAGAGCCAGTATGG+TGG | - | chr4_3:45858540-45858559 | Msa0643250:CDS | 50.0% | |
| AGTAGTGTCCACCACCATAC+TGG | + | chr4_3:45858554-45858573 | None:intergenic | 50.0% | |
| TTGTGGTTGCAATGCCGTTG+TGG | - | chr4_3:45858735-45858754 | Msa0643250:CDS | 50.0% | |
| TGAGGAAGCTCTCATGGTGC+TGG | + | chr4_3:45856525-45856544 | None:intergenic | 55.0% | |
| ACTTGCCTGGTGTTCCTGGT+AGG | + | chr4_3:45856610-45856629 | None:intergenic | 55.0% | |
| AGCAGCACCAATCTTGGAGG+TGG | - | chr4_3:45858261-45858280 | Msa0643250:CDS | 55.0% | |
| GCAGCACCAATCTTGGAGGT+GGG | - | chr4_3:45858262-45858281 | Msa0643250:CDS | 55.0% | |
| TGAGGAAGCTCTCATGGTGC+TGG | + | chr4_3:45856525-45856544 | None:intergenic | 55.0% | |
| ACTTGCCTGGTGTTCCTGGT+AGG | + | chr4_3:45856610-45856629 | None:intergenic | 55.0% | |
| AGCAGCACCAATCTTGGAGG+TGG | - | chr4_3:45858261-45858280 | Msa0643250:CDS | 55.0% | |
| GCAGCACCAATCTTGGAGGT+GGG | - | chr4_3:45858262-45858281 | Msa0643250:CDS | 55.0% | |
| GGCGAGGACACAACCTACCA+TGG | - | chr4_3:45856908-45856927 | Msa0643250:CDS | 60.0% | |
| CTCCAGAGCCAGTATGGTGG+TGG | - | chr4_3:45858543-45858562 | Msa0643250:intron | 60.0% | |
| !! | GTCCACCACCATACTGGCTC+TGG | + | chr4_3:45858548-45858567 | None:intergenic | 60.0% |
| GGCGAGGACACAACCTACCA+TGG | - | chr4_3:45856908-45856927 | Msa0643250:CDS | 60.0% | |
| CTCCAGAGCCAGTATGGTGG+TGG | - | chr4_3:45858543-45858562 | Msa0643250:intron | 60.0% | |
| !! | GTCCACCACCATACTGGCTC+TGG | + | chr4_3:45858548-45858567 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 45856479 | 45858876 | 45856479 | ID=Msa0643250;Name=Msa0643250 |
| chr4_3 | mRNA | 45856479 | 45858876 | 45856479 | ID=Msa0643250-mRNA-1;Parent=Msa0643250;Name=Msa0643250-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.5|0.33|1|1|1|3|298|498 |
| chr4_3 | exon | 45856479 | 45857728 | 45856479 | ID=Msa0643250-mRNA-1:exon:10653;Parent=Msa0643250-mRNA-1 |
| chr4_3 | exon | 45858162 | 45858561 | 45858162 | ID=Msa0643250-mRNA-1:exon:10652;Parent=Msa0643250-mRNA-1 |
| chr4_3 | exon | 45858732 | 45858876 | 45858732 | ID=Msa0643250-mRNA-1:exon:10651;Parent=Msa0643250-mRNA-1 |
| chr4_3 | CDS | 45858732 | 45858876 | 45858732 | ID=Msa0643250-mRNA-1:cds;Parent=Msa0643250-mRNA-1 |
| chr4_3 | CDS | 45858162 | 45858561 | 45858162 | ID=Msa0643250-mRNA-1:cds;Parent=Msa0643250-mRNA-1 |
| chr4_3 | CDS | 45856777 | 45857728 | 45856777 | ID=Msa0643250-mRNA-1:cds;Parent=Msa0643250-mRNA-1 |
| chr4_3 | three_prime_UTR | 45856479 | 45856776 | 45856479 | ID=Msa0643250-mRNA-1:three_prime_utr;Parent=Msa0643250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
