Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690540 | XP_003607352.1 | 97.613 | 377 | 7 | 1 | 1 | 375 | 1 | 377 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690540 | sp|P54967|BIOB_ARATH | 78.042 | 378 | 79 | 3 | 1 | 375 | 1 | 377 | 0.0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690540 | G7JRL6 | 97.613 | 377 | 7 | 1 | 1 | 375 | 1 | 377 | 0.0 | 766 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa0690540 | 0.805691 | 1.181313e-49 | -8.615850e-47 |
| Msa0024400 | Msa0690540 | 0.801974 | 6.988505e-49 | -8.615850e-47 |
| Msa0038000 | Msa0690540 | 0.800012 | 1.759479e-48 | -8.615850e-47 |
| Msa0093010 | Msa0690540 | 0.809148 | 2.183262e-50 | -8.615850e-47 |
| Msa0093850 | Msa0690540 | 0.828487 | 8.747750e-55 | -8.615850e-47 |
| Msa0607520 | Msa0690540 | 0.952986 | 7.388209e-111 | -8.615850e-47 |
| Msa0614510 | Msa0690540 | 0.802361 | 5.818847e-49 | -8.615850e-47 |
| Msa0628420 | Msa0690540 | 0.822825 | 1.925742e-53 | -8.615850e-47 |
| Msa0638480 | Msa0690540 | 0.812627 | 3.854254e-51 | -8.615850e-47 |
| Msa0647820 | Msa0690540 | 0.938198 | 9.988288e-99 | -8.615850e-47 |
| Msa0690310 | Msa0690540 | 0.853154 | 2.883131e-61 | -8.615850e-47 |
| Msa0690540 | Msa0692980 | 0.830092 | 3.568201e-55 | -8.615850e-47 |
| Msa0690540 | Msa0755330 | 0.850209 | 1.969195e-60 | -8.615850e-47 |
| Msa0690540 | Msa0786750 | 0.803324 | 3.679991e-49 | -8.615850e-47 |
| Msa0690540 | Msa0808800 | 0.825153 | 5.473560e-54 | -8.615850e-47 |
| Msa0690540 | Msa0872250 | 0.814934 | 1.196232e-51 | -8.615850e-47 |
| Msa0690540 | Msa0910960 | 0.806245 | 9.032868e-50 | -8.615850e-47 |
| Msa0690540 | Msa1039900 | 0.800618 | 1.324530e-48 | -8.615850e-47 |
| Msa0690540 | Msa1050960 | 0.801944 | 7.089173e-49 | -8.615850e-47 |
| Msa0690540 | Msa1070460 | 0.824748 | 6.823273e-54 | -8.615850e-47 |
| Msa0690540 | Msa1076560 | 0.806996 | 6.271421e-50 | -8.615850e-47 |
| Msa0690540 | Msa1127590 | 0.818001 | 2.461497e-52 | -8.615850e-47 |
| Msa0690540 | Msa1145810 | 0.813325 | 2.710790e-51 | -8.615850e-47 |
| Msa0690540 | Msa1178580 | 0.812346 | 4.440398e-51 | -8.615850e-47 |
| Msa0690540 | Msa1206650 | 0.801539 | 8.586700e-49 | -8.615850e-47 |
| Msa0690540 | Msa1212730 | 0.810411 | 1.167979e-50 | -8.615850e-47 |
| Msa0690540 | Msa1219000 | 0.811984 | 5.325897e-51 | -8.615850e-47 |
| Msa0690540 | Msa1227460 | 0.817852 | 2.659320e-52 | -8.615850e-47 |
| Msa0690540 | Msa1233850 | 0.810217 | 1.286114e-50 | -8.615850e-47 |
| Msa0690540 | Msa1235460 | 0.809386 | 1.941193e-50 | -8.615850e-47 |
| Msa0690540 | Msa1270420 | 0.820634 | 6.182531e-53 | -8.615850e-47 |
| Msa0690540 | Msa1276150 | 0.808050 | 3.746733e-50 | -8.615850e-47 |
| Msa0690540 | Msa1332760 | 0.809919 | 1.490976e-50 | -8.615850e-47 |
| Msa0690540 | Msa1345100 | 0.814423 | 1.552591e-51 | -8.615850e-47 |
| Msa0690540 | Msa1371520 | 0.825544 | 4.424667e-54 | -8.615850e-47 |
| Msa0690540 | Msa1411950 | 0.820900 | 5.371202e-53 | -8.615850e-47 |
| Msa0690540 | Msa1414820 | 0.800536 | 1.376423e-48 | -8.615850e-47 |
| Msa0690540 | Msa1422590 | 0.802337 | 5.885253e-49 | -8.615850e-47 |
| Msa0690540 | Msa1434740 | 0.849050 | 4.146143e-60 | -8.615850e-47 |
| Msa0131590 | Msa0690540 | 0.815906 | 7.269720e-52 | -8.615850e-47 |
| Msa0138360 | Msa0690540 | 0.840249 | 9.741305e-58 | -8.615850e-47 |
| Msa0147980 | Msa0690540 | 0.846400 | 2.223846e-59 | -8.615850e-47 |
| Msa0163510 | Msa0690540 | 0.803890 | 2.808918e-49 | -8.615850e-47 |
| Msa0166460 | Msa0690540 | 0.820939 | 5.261225e-53 | -8.615850e-47 |
| Msa0202490 | Msa0690540 | 0.812923 | 3.320783e-51 | -8.615850e-47 |
| Msa0423750 | Msa0690540 | 0.816517 | 5.308538e-52 | -8.615850e-47 |
| Msa0434570 | Msa0690540 | 0.801605 | 8.320321e-49 | -8.615850e-47 |
| Msa0468250 | Msa0690540 | 0.805158 | 1.527736e-49 | -8.615850e-47 |
| Msa0468270 | Msa0690540 | 0.811293 | 7.527029e-51 | -8.615850e-47 |
| Msa0470530 | Msa0690540 | 0.810738 | 9.930048e-51 | -8.615850e-47 |
| Msa0245580 | Msa0690540 | 0.808073 | 3.705326e-50 | -8.615850e-47 |
| Msa0269470 | Msa0690540 | 0.804691 | 1.913014e-49 | -8.615850e-47 |
| Msa0341690 | Msa0690540 | 0.834160 | 3.519814e-56 | -8.615850e-47 |
| Msa0358400 | Msa0690540 | 0.806152 | 9.450435e-50 | -8.615850e-47 |
| Msa0527190 | Msa0690540 | 0.848756 | 5.005132e-60 | -8.615850e-47 |
| Msa0531250 | Msa0690540 | 0.812867 | 3.414929e-51 | -8.615850e-47 |
| Msa0559870 | Msa0690540 | 0.816027 | 6.834500e-52 | -8.615850e-47 |
| Msa0588090 | Msa0690540 | 0.805906 | 1.064433e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690540 | MtrunA17_Chr4g0039201 | 97.613 | 377 | 7 | 1 | 1 | 375 | 1 | 377 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690540 | AT2G43360.1 | 78.042 | 378 | 79 | 3 | 1 | 375 | 1 | 377 | 0.0 | 619 |
Find 108 sgRNAs with CRISPR-Local
Find 450 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTGGTCCAATCGTTTC+TGG | -0.015035 | 4_4:+58389628 | None:intergenic |
| CACAATCAAGATCTTCAATT+TGG | 0.113084 | 4_4:-58389727 | Msa0690540:CDS |
| CAACTCATGTTTAAAGTTCT+TGG | 0.195744 | 4_4:-58384098 | Msa0690540:CDS |
| CTACTCTCTTCCTCCTTTAT+AGG | 0.204638 | 4_4:-58383955 | Msa0690540:three_prime_UTR |
| TACAGCAATAAGTGCATTAA+TGG | 0.211624 | 4_4:+58384808 | None:intergenic |
| ATTCTTGATCTTCTCTTTCA+TGG | 0.214373 | 4_4:-58389578 | Msa0690540:CDS |
| ATAGACATGCTCATAACTTT+AGG | 0.220660 | 4_4:-58389342 | Msa0690540:CDS |
| TCATCCAAGCTTGGAGCTTT+TGG | 0.226583 | 4_4:+58384068 | None:intergenic |
| ACAATGTATCTGAAGTTATC+AGG | 0.236404 | 4_4:+58383928 | None:intergenic |
| ACTTCGTGATTAACTACTAT+TGG | 0.239885 | 4_4:-58389882 | Msa0690540:five_prime_UTR |
| TCTTGATTGTGAACGCAAAA+TGG | 0.254182 | 4_4:+58389739 | None:intergenic |
| GATGGATTTGACTTCCTCTT+TGG | 0.298498 | 4_4:+58389613 | None:intergenic |
| CTTCAGATACATTGTATGTT+AGG | 0.304944 | 4_4:-58383920 | Msa0690540:three_prime_UTR |
| TAGACATGCTCATAACTTTA+GGG | 0.315642 | 4_4:-58389341 | Msa0690540:CDS |
| CTGTTTACAGGTGGAATTAT+CGG | 0.325033 | 4_4:-58384908 | Msa0690540:intron |
| AAGAAGAAGAAATCATGTTT+TGG | 0.330494 | 4_4:-58389769 | Msa0690540:exon |
| GAACAAGGATGCTGTTCTTC+AGG | 0.331156 | 4_4:-58389206 | Msa0690540:CDS |
| ATGGAGGTGTGTTGCACCCT+TGG | 0.332305 | 4_4:-58388018 | Msa0690540:CDS |
| GCATTAATGGGAACACTCTC+TGG | 0.337355 | 4_4:+58384821 | None:intergenic |
| TCTTTGGTCCAATCGTTTCT+GGG | 0.338511 | 4_4:+58389629 | None:intergenic |
| ACTCTTCTATCTGTGAAAAC+TGG | 0.339092 | 4_4:-58389304 | Msa0690540:CDS |
| ACAATCAAGATCTTCAATTT+GGG | 0.353418 | 4_4:-58389726 | Msa0690540:CDS |
| CTCGAGTTTGTTCGTGATGC+AGG | 0.355837 | 4_4:-58387862 | Msa0690540:CDS |
| GTCCTTGTTGTGATGATGTT+TGG | 0.358078 | 4_4:+58387907 | None:intergenic |
| GATAACCTGACCATTGCTTT+TGG | 0.373125 | 4_4:+58384239 | None:intergenic |
| TTCTTGATCTTCTCTTTCAT+GGG | 0.374526 | 4_4:-58389577 | Msa0690540:CDS |
| AGCTGCTTCTTCTAGTTAGT+TGG | 0.381526 | 4_4:-58384012 | Msa0690540:exon |
| TTTCCAGCCTGTTGAAATAT+GGG | 0.382462 | 4_4:-58384300 | Msa0690540:intron |
| TAATGCACTTATTGCTGTAA+AGG | 0.384583 | 4_4:-58384804 | Msa0690540:CDS |
| ATCACAATCTTGACACTTCA+AGG | 0.393394 | 4_4:-58387939 | Msa0690540:CDS |
| GGTGCCAATTCTATCTTTGC+TGG | 0.395612 | 4_4:-58384164 | Msa0690540:CDS |
| AGATATGATACAGGACTTAA+AGG | 0.396045 | 4_4:-58389241 | Msa0690540:CDS |
| TGTAAAGGGAACCCCTCTTC+AGG | 0.396586 | 4_4:-58384789 | Msa0690540:CDS |
| AATGCACTTATTGCTGTAAA+GGG | 0.397169 | 4_4:-58384803 | Msa0690540:CDS |
| GTTATCAGGGGAGCCTATAA+AGG | 0.398806 | 4_4:+58383942 | None:intergenic |
| GGTTATCTGCCGGCAGAGTT+CGG | 0.405446 | 4_4:-58384223 | Msa0690540:CDS |
| ACTACATATGTTAACAGAAA+TGG | 0.406189 | 4_4:+58383985 | None:intergenic |
| ACAGGTGGAATTATCGGGCT+TGG | 0.409015 | 4_4:-58384902 | Msa0690540:intron |
| CAGGCATTGTGCTTTCTAGC+TGG | 0.411208 | 4_4:-58384185 | Msa0690540:CDS |
| TTCACCAGCAAAGATAGAAT+TGG | 0.413825 | 4_4:+58384160 | None:intergenic |
| TTTATTGTTCTGAATGAAAA+GGG | 0.419540 | 4_4:+58389850 | None:intergenic |
| CTCTTCTATCTGTGAAAACT+GGG | 0.419588 | 4_4:-58389303 | Msa0690540:CDS |
| ACAGCAATAAGTGCATTAAT+GGG | 0.424019 | 4_4:+58384809 | None:intergenic |
| ATCATCTCCCATATTTCAAC+AGG | 0.427600 | 4_4:+58384293 | None:intergenic |
| TTGTTCTAGGCTAAAGAGGC+TGG | 0.434392 | 4_4:-58388356 | Msa0690540:intron |
| AGAAAGCACAATGCCTGCTC+AGG | 0.444179 | 4_4:+58384191 | None:intergenic |
| TCGGTTCTCCGTGCCTGAGC+AGG | 0.450301 | 4_4:-58384204 | Msa0690540:CDS |
| CTTGATTGTGAACGCAAAAT+GGG | 0.454351 | 4_4:+58389740 | None:intergenic |
| AAGAATGGGAGAATCATAGA+TGG | 0.458283 | 4_4:+58389595 | None:intergenic |
| AGGAGGAAGAGAGTAGTTGA+AGG | 0.460452 | 4_4:+58383962 | None:intergenic |
| TGTTTACAGGTGGAATTATC+GGG | 0.461360 | 4_4:-58384907 | Msa0690540:intron |
| ATGAAAGAGAAGATCAAGAA+TGG | 0.467131 | 4_4:+58389580 | None:intergenic |
| TTAATCACGAAGTGAAGTAA+AGG | 0.486197 | 4_4:+58389892 | None:intergenic |
| TTCAAGTATCTGCTTGAAGT+TGG | 0.487141 | 4_4:+58388280 | None:intergenic |
| GTTTCATCATCATCCAAGCT+TGG | 0.487186 | 4_4:+58384059 | None:intergenic |
| TTGCATGGGCGCTGCATGGA+GGG | 0.488788 | 4_4:-58388321 | Msa0690540:CDS |
| GCTTCCAAAAGCTCCAAGCT+TGG | 0.493652 | 4_4:-58384072 | Msa0690540:CDS |
| GTGTTGCACCCTTGGCATGC+TGG | 0.496041 | 4_4:-58388010 | Msa0690540:CDS |
| TATCATATCTAGAGGATTGA+GGG | 0.496475 | 4_4:+58389254 | None:intergenic |
| TGGCATGCTGGATAAAGATC+AGG | 0.498708 | 4_4:-58387998 | Msa0690540:CDS |
| CAATGCCAAAAGCAATGGTC+AGG | 0.500807 | 4_4:-58384244 | Msa0690540:CDS |
| TGAAAGAGAAGATCAAGAAT+GGG | 0.501465 | 4_4:+58389581 | None:intergenic |
| TAATCACGAAGTGAAGTAAA+GGG | 0.505067 | 4_4:+58389893 | None:intergenic |
| CACGGAGAACCGAACTCTGC+CGG | 0.506574 | 4_4:+58384214 | None:intergenic |
| AAAGGAATTATAATGCTGTA+AGG | 0.507216 | 4_4:+58389703 | None:intergenic |
| TTTGCATGGGCGCTGCATGG+AGG | 0.508596 | 4_4:-58388322 | Msa0690540:CDS |
| AGCTGCTGATGAAGTTGAAA+AGG | 0.521626 | 4_4:+58389685 | None:intergenic |
| TCGAGTTTGTTCGTGATGCA+GGG | 0.521893 | 4_4:-58387861 | Msa0690540:CDS |
| CAATCCTCTAGATATGATAC+AGG | 0.523313 | 4_4:-58389250 | Msa0690540:CDS |
| GCTGGTGAGCTCAAGAAGGC+AGG | 0.530926 | 4_4:-58387976 | Msa0690540:CDS |
| CAATGTATCTGAAGTTATCA+GGG | 0.533618 | 4_4:+58383929 | None:intergenic |
| ATCAAAATCATTGTTAGCAG+TGG | 0.540009 | 4_4:+58384127 | None:intergenic |
| GTATCATATCTAGAGGATTG+AGG | 0.540265 | 4_4:+58389253 | None:intergenic |
| CTTTGGTCCAATCGTTTCTG+GGG | 0.546525 | 4_4:+58389630 | None:intergenic |
| TCACCTTCTGATCCTGAAGA+GGG | 0.552064 | 4_4:+58384777 | None:intergenic |
| TCTTGATCTTCTCTTTCATG+GGG | 0.553899 | 4_4:-58389576 | Msa0690540:intron |
| ATCTTTATCCAGCATGCCAA+GGG | 0.555001 | 4_4:+58388002 | None:intergenic |
| TGTTCTAGGCTAAAGAGGCT+GGG | 0.557041 | 4_4:-58388355 | Msa0690540:intron |
| GATCTTTATCCAGCATGCCA+AGG | 0.567801 | 4_4:+58388001 | None:intergenic |
| GGAACACTCTCTGGATGTGT+AGG | 0.573548 | 4_4:+58384830 | None:intergenic |
| AACCCCTCTTCAGGATCAGA+AGG | 0.584376 | 4_4:-58384780 | Msa0690540:intron |
| TCAGGCTGGTGAGCTCAAGA+AGG | 0.586637 | 4_4:-58387980 | Msa0690540:CDS |
| CTTCTATCTGTGAAAACTGG+GGG | 0.591187 | 4_4:-58389301 | Msa0690540:CDS |
| TGTTCTTCAGGCCGCAGTCA+AGG | 0.593054 | 4_4:-58389194 | Msa0690540:intron |
| CTCACCTTCTGATCCTGAAG+AGG | 0.598031 | 4_4:+58384776 | None:intergenic |
| GCACAATGCCTGCTCAGGCA+CGG | 0.607283 | 4_4:+58384196 | None:intergenic |
| GCAATGGTCAGGTTATCTGC+CGG | 0.608756 | 4_4:-58384233 | Msa0690540:CDS |
| TCACAATCTTGACACTTCAA+GGG | 0.616066 | 4_4:-58387938 | Msa0690540:CDS |
| TATCACAATGCCAAAAGCAA+TGG | 0.617688 | 4_4:-58384249 | Msa0690540:CDS |
| AAGTCCTGTATCATATCTAG+AGG | 0.624831 | 4_4:+58389246 | None:intergenic |
| AATATGGCCCCAGAAACGAT+TGG | 0.630760 | 4_4:-58389637 | Msa0690540:CDS |
| CAGAAACGATTGGACCAAAG+AGG | 0.631306 | 4_4:-58389627 | Msa0690540:CDS |
| ATCAGGGGAGCCTATAAAGG+AGG | 0.635883 | 4_4:+58383945 | None:intergenic |
| GATGATCCGCATGATTGCAA+CGG | 0.641283 | 4_4:-58384276 | Msa0690540:CDS |
| TATCGGGCTTGGAGAAGCAG+AGG | 0.642505 | 4_4:-58384891 | Msa0690540:CDS |
| GCAGGGATTAATGTTTGTAG+TGG | 0.646587 | 4_4:-58387844 | Msa0690540:intron |
| GCTGCATGGAGGGATACGAT+AGG | 0.661097 | 4_4:-58388311 | Msa0690540:CDS |
| GAAGCAGAGGAAGACCGTGT+AGG | 0.666808 | 4_4:-58384878 | Msa0690540:CDS |
| CACCTTCTGATCCTGAAGAG+GGG | 0.671172 | 4_4:+58384778 | None:intergenic |
| TACGTGCCGTTGCAATCATG+CGG | 0.678363 | 4_4:+58384270 | None:intergenic |
| TCTTCTATCTGTGAAAACTG+GGG | 0.679013 | 4_4:-58389302 | Msa0690540:CDS |
| GGATGATGATGAAACTAATG+AGG | 0.695089 | 4_4:-58384051 | Msa0690540:CDS |
| ATCCAAACATCATCACAACA+AGG | 0.696715 | 4_4:-58387909 | Msa0690540:CDS |
| TTCTATCTGTGAAAACTGGG+GGG | 0.697571 | 4_4:-58389300 | Msa0690540:CDS |
| ATGTATGTAACAAACCTACA+CGG | 0.697572 | 4_4:+58384864 | None:intergenic |
| AATGTATCTGAAGTTATCAG+GGG | 0.697966 | 4_4:+58383930 | None:intergenic |
| ATGCTGGATAAAGATCAGGC+TGG | 0.711212 | 4_4:-58387994 | Msa0690540:CDS |
| ATAAAAGACTACCTTGACTG+CGG | 0.713325 | 4_4:+58389183 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTGATTTTTTTTTTAAT+TGG | - | chr4_4:58384242-58384261 | Msa0690540:CDS | 10.0% |
| !!! | ACTAAAATTAATTTTTTTGT+GGG | + | chr4_4:58387756-58387775 | None:intergenic | 10.0% |
| !!! | ACAAAAAAATTAATTTTAGT+GGG | - | chr4_4:58387756-58387775 | Msa0690540:intron | 10.0% |
| !!! | AAACAAATTTATTTTAAGAA+GGG | - | chr4_4:58387787-58387806 | Msa0690540:intron | 10.0% |
| !! | ATTATATTATAATAAACATC+AGG | + | chr4_4:58388286-58388305 | None:intergenic | 10.0% |
| !! | ACAATTGTTAAAATGATAAA+GGG | + | chr4_4:58384930-58384949 | None:intergenic | 15.0% |
| !! | AACAATTGTTAAAATGATAA+AGG | + | chr4_4:58384931-58384950 | None:intergenic | 15.0% |
| !! | TACTTGAATAAAGAATAAAA+TGG | + | chr4_4:58386238-58386257 | None:intergenic | 15.0% |
| !! | AAAAAAAGTTAAAGACTTTA+GGG | + | chr4_4:58387116-58387135 | None:intergenic | 15.0% |
| !! | TAAAAAAAGTTAAAGACTTT+AGG | + | chr4_4:58387117-58387136 | None:intergenic | 15.0% |
| !! | AAGATAAAGTTTATAGTTAA+TGG | - | chr4_4:58387707-58387726 | Msa0690540:intron | 15.0% |
| !! | AGATAAAGTTTATAGTTAAT+GGG | - | chr4_4:58387708-58387727 | Msa0690540:intron | 15.0% |
| !!! | CACTAAAATTAATTTTTTTG+TGG | + | chr4_4:58387757-58387776 | None:intergenic | 15.0% |
| !!! | CACAAAAAAATTAATTTTAG+TGG | - | chr4_4:58387755-58387774 | Msa0690540:intron | 15.0% |
| !!! | CTTCTTAAAATAAATTTGTT+TGG | + | chr4_4:58387788-58387807 | None:intergenic | 15.0% |
| !!! | CAAACAAATTTATTTTAAGA+AGG | - | chr4_4:58387786-58387805 | Msa0690540:intron | 15.0% |
| !!! | AACAAATTTATTTTAAGAAG+GGG | - | chr4_4:58387788-58387807 | Msa0690540:intron | 15.0% |
| !!! | TTATAATTTTCATACATTCA+AGG | - | chr4_4:58388079-58388098 | Msa0690540:intron | 15.0% |
| !!! | ATATTTTGTAGTTAATTAAC+TGG | + | chr4_4:58388404-58388423 | None:intergenic | 15.0% |
| !!! | ATTTTGATAATATATATAGC+TGG | + | chr4_4:58388553-58388572 | None:intergenic | 15.0% |
| !! | TAAAAACAGTTAAAAAAACT+GGG | + | chr4_4:58388717-58388736 | None:intergenic | 15.0% |
| !! | ACAAGCATAAAAAAAATTAT+GGG | + | chr4_4:58389170-58389189 | None:intergenic | 15.0% |
| !! | AACAAGCATAAAAAAAATTA+TGG | + | chr4_4:58389171-58389190 | None:intergenic | 15.0% |
| !!! | TTTATTGTTCTGAATGAAAA+GGG | + | chr4_4:58383889-58383908 | None:intergenic | 20.0% |
| !!! | TTTTATTGTTCTGAATGAAA+AGG | + | chr4_4:58383890-58383909 | None:intergenic | 20.0% |
| !! | AATGAATGAATTCAAAATTG+AGG | + | chr4_4:58383937-58383956 | None:intergenic | 20.0% |
| !! | TTTAACTAAAAGAACAAAAG+GGG | + | chr4_4:58384222-58384241 | None:intergenic | 20.0% |
| !! | CTTTAACTAAAAGAACAAAA+GGG | + | chr4_4:58384223-58384242 | None:intergenic | 20.0% |
| !! | ACTTTAACTAAAAGAACAAA+AGG | + | chr4_4:58384224-58384243 | None:intergenic | 20.0% |
| !!! | TTTGTTGGAAAATTTTGAAA+TGG | - | chr4_4:58384297-58384316 | Msa0690540:intron | 20.0% |
| !!! | TGTTTTTGTTGTGATTTTTT+AGG | - | chr4_4:58384362-58384381 | Msa0690540:intron | 20.0% |
| !!! | ATTATTGTTACCTGATTTTT+GGG | + | chr4_4:58384722-58384741 | None:intergenic | 20.0% |
| !! | CAATAATGAAAAAGATAGTA+AGG | - | chr4_4:58384735-58384754 | Msa0690540:intron | 20.0% |
| !! | ATTGTTACAATATCTTCATT+TGG | - | chr4_4:58385067-58385086 | Msa0690540:intron | 20.0% |
| !!! | TTTGGAATTATAACCATTTA+TGG | - | chr4_4:58385145-58385164 | Msa0690540:intron | 20.0% |
| !! | TTGGAATTATAACCATTTAT+GGG | - | chr4_4:58385146-58385165 | Msa0690540:intron | 20.0% |
| !!! | ATGATTAATTTTCCCATAAA+TGG | + | chr4_4:58385161-58385180 | None:intergenic | 20.0% |
| !! | TGATAGAAAAATCAAACAAT+TGG | + | chr4_4:58385240-58385259 | None:intergenic | 20.0% |
| !! | ATATTATTCAAGAACAATCA+TGG | + | chr4_4:58385349-58385368 | None:intergenic | 20.0% |
| !! | ATGATTGTTCTTGAATAATA+TGG | - | chr4_4:58385348-58385367 | Msa0690540:intron | 20.0% |
| !!! | TTCATAGTAGTTGATAATTA+AGG | + | chr4_4:58385524-58385543 | None:intergenic | 20.0% |
| !!! | CTACTATGAAATAAGTTTTA+TGG | - | chr4_4:58385534-58385553 | Msa0690540:intron | 20.0% |
| !! | TATTTGACAAACCTAATAAT+TGG | - | chr4_4:58385573-58385592 | Msa0690540:intron | 20.0% |
| !! | TGATACAGATAGTTATAATA+TGG | - | chr4_4:58386033-58386052 | Msa0690540:intron | 20.0% |
| !! | TGATACAGATAGTTATAATA+TGG | - | chr4_4:58386033-58386052 | Msa0690540:intron | 20.0% |
| !! | TAATTATAACTATCTGTATC+TGG | + | chr4_4:58386305-58386324 | None:intergenic | 20.0% |
| !! | AGATACAGATAGTTATAATT+AGG | - | chr4_4:58386304-58386323 | Msa0690540:intron | 20.0% |
| !! | ATAGAATGTAAAGAATAGAA+TGG | + | chr4_4:58386402-58386421 | None:intergenic | 20.0% |
| !! | AAAAAAGTTAAAGACTTTAG+GGG | + | chr4_4:58387115-58387134 | None:intergenic | 20.0% |
| !! | TAAAAAGAACAACAGAAAAT+TGG | - | chr4_4:58387314-58387333 | Msa0690540:intron | 20.0% |
| !! | AAAAAAACTGAAAAAAGATG+GGG | + | chr4_4:58387400-58387419 | None:intergenic | 20.0% |
| !! | GAAAAAAACTGAAAAAAGAT+GGG | + | chr4_4:58387401-58387420 | None:intergenic | 20.0% |
| !! | AGAAAAAAACTGAAAAAAGA+TGG | + | chr4_4:58387402-58387421 | None:intergenic | 20.0% |
| !!! | ACAAATTTATTTTAAGAAGG+GGG | - | chr4_4:58387789-58387808 | Msa0690540:intron | 20.0% |
| !!! | TAATGAGTAAATAGTCATTT+TGG | + | chr4_4:58388138-58388157 | None:intergenic | 20.0% |
| !! | ATATTATAATAAACATCAGG+AGG | + | chr4_4:58388283-58388302 | None:intergenic | 20.0% |
| !! | AACTACAAAATATTTCTTCT+TGG | - | chr4_4:58388411-58388430 | Msa0690540:intron | 20.0% |
| !! | GTAAAAACAGTTAAAAAAAC+TGG | + | chr4_4:58388718-58388737 | None:intergenic | 20.0% |
| !! | AATTGAAAGAGAAAAAAAAC+TGG | + | chr4_4:58388780-58388799 | None:intergenic | 20.0% |
| !!! | TAATAGAGCTTAATTTTTAG+TGG | - | chr4_4:58389063-58389082 | Msa0690540:intron | 20.0% |
| !! | CAAACATGAAAAAATATTTC+AGG | + | chr4_4:58389207-58389226 | None:intergenic | 20.0% |
| !!! | ATTTTTAGCCATATTTTGAT+TGG | - | chr4_4:58389294-58389313 | Msa0690540:CDS | 20.0% |
| !! | TTTGTGAAAAATGATATGTA+AGG | + | chr4_4:58389357-58389376 | None:intergenic | 20.0% |
| !! | AAGAAGAAGAAATCATGTTT+TGG | - | chr4_4:58383967-58383986 | Msa0690540:three_prime_UTR | 25.0% |
| ! | ACAATCAAGATCTTCAATTT+GGG | - | chr4_4:58384010-58384029 | Msa0690540:exon | 25.0% |
| ! | AAAGGAATTATAATGCTGTA+AGG | + | chr4_4:58384036-58384055 | None:intergenic | 25.0% |
| ! | GCTGAAAAAACCATAAAATA+TGG | - | chr4_4:58384083-58384102 | Msa0690540:CDS | 25.0% |
| ! | TGTTTAAATAGCATGTATCT+TGG | - | chr4_4:58384590-58384609 | Msa0690540:intron | 25.0% |
| ! | ATGATCCAAAATATAGCATT+TGG | - | chr4_4:58384639-58384658 | Msa0690540:intron | 25.0% |
| !! | TTGATCCAAATGCTATATTT+TGG | + | chr4_4:58384647-58384666 | None:intergenic | 25.0% |
| !! | CATTATTGTTACCTGATTTT+TGG | + | chr4_4:58384723-58384742 | None:intergenic | 25.0% |
| ! | TAATGAAAAAGATAGTAAGG+TGG | - | chr4_4:58384738-58384757 | Msa0690540:intron | 25.0% |
| !! | TTGGTATTGAGTAAAATGAT+TGG | - | chr4_4:58384814-58384833 | Msa0690540:CDS | 25.0% |
| !!! | TAGCTATTAGTCTTATACTT+AGG | - | chr4_4:58384875-58384894 | Msa0690540:CDS | 25.0% |
| ! | TTGTTAAAATGATAAAGGGA+AGG | + | chr4_4:58384926-58384945 | None:intergenic | 25.0% |
| ! | AAGTTGTATTTACTAAACCT+TGG | + | chr4_4:58385012-58385031 | None:intergenic | 25.0% |
| !!! | ATGGAGAATATTTTTGTTCT+AGG | - | chr4_4:58385367-58385386 | Msa0690540:intron | 25.0% |
| ! | TGAGTAAACAAATTATTGAC+AGG | + | chr4_4:58385952-58385971 | None:intergenic | 25.0% |
| ! | TGAGTAAACAAATTATTGAC+AGG | + | chr4_4:58385952-58385971 | None:intergenic | 25.0% |
| !!! | GTCAATAATTTGTTTACTCA+TGG | - | chr4_4:58385952-58385971 | Msa0690540:intron | 25.0% |
| ! | TGAGTAAACAAATTATTGAC+AGG | + | chr4_4:58385952-58385971 | None:intergenic | 25.0% |
| !!! | GTCAATAATTTGTTTACTCA+TGG | - | chr4_4:58385952-58385971 | Msa0690540:intron | 25.0% |
| ! | CAAGAAAAACAAAGACATAA+TGG | + | chr4_4:58386510-58386529 | None:intergenic | 25.0% |
| !!! | CATTATGTCTTTGTTTTTCT+TGG | - | chr4_4:58386508-58386527 | Msa0690540:intron | 25.0% |
| ! | TATACTTCTCAGTCTATATT+GGG | + | chr4_4:58386659-58386678 | None:intergenic | 25.0% |
| ! | TTATACTTCTCAGTCTATAT+TGG | + | chr4_4:58386660-58386679 | None:intergenic | 25.0% |
| !! | ACTGAGAAGTATAAACATAT+TGG | - | chr4_4:58386666-58386685 | Msa0690540:intron | 25.0% |
| !!! | TAAACATATTGGTTTGATAC+TGG | - | chr4_4:58386677-58386696 | Msa0690540:intron | 25.0% |
| !!! | AAACATATTGGTTTGATACT+GGG | - | chr4_4:58386678-58386697 | Msa0690540:intron | 25.0% |
| ! | AAAAAGCTAAGTTATCAAAG+TGG | - | chr4_4:58386779-58386798 | Msa0690540:intron | 25.0% |
| ! | GAAAATTGCTATAAAGAGAA+AGG | - | chr4_4:58386872-58386891 | Msa0690540:intron | 25.0% |
| !! | ATCTTTTCTATTCCTTCAAT+TGG | - | chr4_4:58386963-58386982 | Msa0690540:intron | 25.0% |
| ! | GTAGCAAATTACATGTATTA+TGG | + | chr4_4:58386996-58387015 | None:intergenic | 25.0% |
| ! | TTGACTACAGTATAAGTAAA+AGG | + | chr4_4:58387047-58387066 | None:intergenic | 25.0% |
| ! | AAAAAGTTAAAGACTTTAGG+GGG | + | chr4_4:58387114-58387133 | None:intergenic | 25.0% |
| ! | CACTATAACTATTGTTCATA+CGG | + | chr4_4:58387150-58387169 | None:intergenic | 25.0% |
| !! | GAGTATTGCATTTATTAAAG+GGG | + | chr4_4:58387195-58387214 | None:intergenic | 25.0% |
| !! | CGAGTATTGCATTTATTAAA+GGG | + | chr4_4:58387196-58387215 | None:intergenic | 25.0% |
| !! | TCGAGTATTGCATTTATTAA+AGG | + | chr4_4:58387197-58387216 | None:intergenic | 25.0% |
| ! | CAATACTCGAAACTTATATA+TGG | - | chr4_4:58387207-58387226 | Msa0690540:intron | 25.0% |
| !!! | TCTTTTTTTGAAAAGCTGTT+CGG | - | chr4_4:58387419-58387438 | Msa0690540:intron | 25.0% |
| !!! | AAAAATTAATTTTAGTGGGC+TGG | - | chr4_4:58387760-58387779 | Msa0690540:intron | 25.0% |
| !!! | AAAATTAATTTTAGTGGGCT+GGG | - | chr4_4:58387761-58387780 | Msa0690540:intron | 25.0% |
| ! | TTGTTAATTAGTTCGGTTAT+CGG | + | chr4_4:58388006-58388025 | None:intergenic | 25.0% |
| !! | GTGTCTTTTGTTAATTAGTT+CGG | + | chr4_4:58388013-58388032 | None:intergenic | 25.0% |
| ! | ATTATAAAAACATTCCAGAG+CGG | + | chr4_4:58388066-58388085 | None:intergenic | 25.0% |
| ! | ACATCATTTCACACATTTAA+AGG | - | chr4_4:58388111-58388130 | Msa0690540:intron | 25.0% |
| ! | TTGTATTGTGTCAATCTAAT+AGG | + | chr4_4:58388176-58388195 | None:intergenic | 25.0% |
| ! | AACCTTCTGTTTATATATTG+TGG | - | chr4_4:58388336-58388355 | Msa0690540:CDS | 25.0% |
| ! | TTATGGGCATTAAAATCAAA+AGG | + | chr4_4:58389154-58389173 | None:intergenic | 25.0% |
| ! | ACTACATATGTTAACAGAAA+TGG | + | chr4_4:58389754-58389773 | None:intergenic | 25.0% |
| TAATCACGAAGTGAAGTAAA+GGG | + | chr4_4:58383846-58383865 | None:intergenic | 30.0% | |
| TTAATCACGAAGTGAAGTAA+AGG | + | chr4_4:58383847-58383866 | None:intergenic | 30.0% | |
| ACTTCGTGATTAACTACTAT+TGG | - | chr4_4:58383854-58383873 | Msa0690540:three_prime_UTR | 30.0% | |
| CACAATCAAGATCTTCAATT+TGG | - | chr4_4:58384009-58384028 | Msa0690540:exon | 30.0% | |
| TGAAAGAGAAGATCAAGAAT+GGG | + | chr4_4:58384158-58384177 | None:intergenic | 30.0% | |
| ATGAAAGAGAAGATCAAGAA+TGG | + | chr4_4:58384159-58384178 | None:intergenic | 30.0% | |
| ATTCTTGATCTTCTCTTTCA+TGG | - | chr4_4:58384158-58384177 | Msa0690540:CDS | 30.0% | |
| TTCTTGATCTTCTCTTTCAT+GGG | - | chr4_4:58384159-58384178 | Msa0690540:CDS | 30.0% | |
| AAACACCTCATTTCCTTAAT+GGG | + | chr4_4:58384278-58384297 | None:intergenic | 30.0% | |
| AAAACACCTCATTTCCTTAA+TGG | + | chr4_4:58384279-58384298 | None:intergenic | 30.0% | |
| ATAGACATGCTCATAACTTT+AGG | - | chr4_4:58384394-58384413 | Msa0690540:intron | 30.0% | |
| TAGACATGCTCATAACTTTA+GGG | - | chr4_4:58384395-58384414 | Msa0690540:intron | 30.0% | |
| TATCATATCTAGAGGATTGA+GGG | + | chr4_4:58384485-58384504 | None:intergenic | 30.0% | |
| AGATATGATACAGGACTTAA+AGG | - | chr4_4:58384495-58384514 | Msa0690540:intron | 30.0% | |
| ! | GTCAAGGTAGTCTTTTATAT+TGG | - | chr4_4:58384558-58384577 | Msa0690540:intron | 30.0% |
| !! | TGTATCTTGGTGTTTCAATA+AGG | - | chr4_4:58384603-58384622 | Msa0690540:intron | 30.0% |
| TGGTATAACATATTTAGTCG+AGG | - | chr4_4:58384673-58384692 | Msa0690540:intron | 30.0% | |
| ACATATTTAGTCGAGGAAAA+TGG | - | chr4_4:58384680-58384699 | Msa0690540:intron | 30.0% | |
| !! | TTCCAGGGATTTTGTTTAAA+AGG | - | chr4_4:58384773-58384792 | Msa0690540:intron | 30.0% |
| !! | TCCAGGGATTTTGTTTAAAA+GGG | - | chr4_4:58384774-58384793 | Msa0690540:intron | 30.0% |
| ! | TTTTACTCAATACCAACCAT+TGG | + | chr4_4:58384810-58384829 | None:intergenic | 30.0% |
| ATTGTTGGTACAAATTGCAA+TGG | + | chr4_4:58384967-58384986 | None:intergenic | 30.0% | |
| ! | AAGACATGTATCGTGTTTTT+CGG | - | chr4_4:58385090-58385109 | Msa0690540:intron | 30.0% |
| !! | ATTTTTGTTCTAGGCTAAAG+AGG | - | chr4_4:58385376-58385395 | Msa0690540:intron | 30.0% |
| TGACAAACCTAATAATTGGT+TGG | - | chr4_4:58385577-58385596 | Msa0690540:intron | 30.0% | |
| GAGATAATGATTCAATCCAT+AGG | - | chr4_4:58385647-58385666 | Msa0690540:intron | 30.0% | |
| AGTGTTATCATATCTACCTA+TGG | + | chr4_4:58385666-58385685 | None:intergenic | 30.0% | |
| !!! | TCAGCTATCTTTGTCATTTT+AGG | - | chr4_4:58385686-58385705 | Msa0690540:intron | 30.0% |
| !!! | CAGCTATCTTTGTCATTTTA+GGG | - | chr4_4:58385687-58385706 | Msa0690540:intron | 30.0% |
| !!! | AGCTATCTTTGTCATTTTAG+GGG | - | chr4_4:58385688-58385707 | Msa0690540:intron | 30.0% |
| CAAATTATTGACAGGTTTCA+TGG | + | chr4_4:58385944-58385963 | None:intergenic | 30.0% | |
| CAAATTATTGACAGGTTTCA+TGG | + | chr4_4:58385944-58385963 | None:intergenic | 30.0% | |
| CAAATTATTGACAGGTTTCA+TGG | + | chr4_4:58385944-58385963 | None:intergenic | 30.0% | |
| ! | CTTGAGAAGAGTATATAAAG+AGG | + | chr4_4:58386602-58386621 | None:intergenic | 30.0% |
| GGAAGACTAAATTGTTAAGT+TGG | + | chr4_4:58386704-58386723 | None:intergenic | 30.0% | |
| GAAAAGATAACTGGAACAAA+AGG | + | chr4_4:58386951-58386970 | None:intergenic | 30.0% | |
| GAAGGAATAGAAAAGATAAC+TGG | + | chr4_4:58386960-58386979 | None:intergenic | 30.0% | |
| TATGGAATCAATCCAATTGA+AGG | + | chr4_4:58386978-58386997 | None:intergenic | 30.0% | |
| ! | GGGTATTGCATTTATTAAAG+GGG | + | chr4_4:58387175-58387194 | None:intergenic | 30.0% |
| !! | GGGGTATTGCATTTATTAAA+GGG | + | chr4_4:58387176-58387195 | None:intergenic | 30.0% |
| !! | AGGGGTATTGCATTTATTAA+AGG | + | chr4_4:58387177-58387196 | None:intergenic | 30.0% |
| !!! | AAATTAATTTTAGTGGGCTG+GGG | - | chr4_4:58387762-58387781 | Msa0690540:intron | 30.0% |
| !! | ACATTAAACCCCATTTTTGT+TGG | + | chr4_4:58387815-58387834 | None:intergenic | 30.0% |
| AACAAAAATGGGGTTTAATG+TGG | - | chr4_4:58387814-58387833 | Msa0690540:intron | 30.0% | |
| ACAAAAATGGGGTTTAATGT+GGG | - | chr4_4:58387815-58387834 | Msa0690540:intron | 30.0% | |
| !! | TTTAATGTGGGCTTTTTAAG+TGG | - | chr4_4:58387827-58387846 | Msa0690540:intron | 30.0% |
| !!! | TTAATGTGGGCTTTTTAAGT+GGG | - | chr4_4:58387828-58387847 | Msa0690540:intron | 30.0% |
| ! | TCTTCTGCTGGTAATTTTAT+GGG | - | chr4_4:58387955-58387974 | Msa0690540:CDS | 30.0% |
| TTATAAAAACATTCCAGAGC+GGG | + | chr4_4:58388065-58388084 | None:intergenic | 30.0% | |
| ATAAACATCAGGAGGATTAA+GGG | + | chr4_4:58388275-58388294 | None:intergenic | 30.0% | |
| AATAAACATCAGGAGGATTA+AGG | + | chr4_4:58388276-58388295 | None:intergenic | 30.0% | |
| TGCCACAATATATAAACAGA+AGG | + | chr4_4:58388341-58388360 | None:intergenic | 30.0% | |
| !!! | TCGCAAGTTTTAGATCATTT+GGG | - | chr4_4:58388476-58388495 | Msa0690540:intron | 30.0% |
| !!! | ATCCATAGAAGACTAGTTTT+TGG | - | chr4_4:58388507-58388526 | Msa0690540:intron | 30.0% |
| !!! | TCCATAGAAGACTAGTTTTT+GGG | - | chr4_4:58388508-58388527 | Msa0690540:intron | 30.0% |
| ! | ATCCAAAGAAAGTTTGTTCA+AGG | - | chr4_4:58388690-58388709 | Msa0690540:intron | 30.0% |
| ACAAGACATTATCTTGCATA+GGG | + | chr4_4:58388755-58388774 | None:intergenic | 30.0% | |
| AACAAGACATTATCTTGCAT+AGG | + | chr4_4:58388756-58388775 | None:intergenic | 30.0% | |
| ATGTATGTAACAAACCTACA+CGG | + | chr4_4:58388875-58388894 | None:intergenic | 30.0% | |
| ACAGCAATAAGTGCATTAAT+GGG | + | chr4_4:58388930-58388949 | None:intergenic | 30.0% | |
| TACAGCAATAAGTGCATTAA+TGG | + | chr4_4:58388931-58388950 | None:intergenic | 30.0% | |
| TAATGCACTTATTGCTGTAA+AGG | - | chr4_4:58388932-58388951 | Msa0690540:intron | 30.0% | |
| AATGCACTTATTGCTGTAAA+GGG | - | chr4_4:58388933-58388952 | Msa0690540:intron | 30.0% | |
| ATGCAATGTTGAATTGTTAG+AGG | - | chr4_4:58389094-58389113 | Msa0690540:intron | 30.0% | |
| ! | TAGAGGTTTAAGTGTGTTTT+TGG | - | chr4_4:58389111-58389130 | Msa0690540:intron | 30.0% |
| TTTCATGTTTGAATTGATCG+TGG | - | chr4_4:58389216-58389235 | Msa0690540:CDS | 30.0% | |
| TGATGACACCAATCAAAATA+TGG | + | chr4_4:58389305-58389324 | None:intergenic | 30.0% | |
| GTAGATGAGTGATGAATTTA+AGG | + | chr4_4:58389335-58389354 | None:intergenic | 30.0% | |
| ATCAAAATCATTGTTAGCAG+TGG | + | chr4_4:58389612-58389631 | None:intergenic | 30.0% | |
| ! | CAACTCATGTTTAAAGTTCT+TGG | - | chr4_4:58389638-58389657 | Msa0690540:CDS | 30.0% |
| ! | AATGTATCTGAAGTTATCAG+GGG | + | chr4_4:58389809-58389828 | None:intergenic | 30.0% |
| ! | CAATGTATCTGAAGTTATCA+GGG | + | chr4_4:58389810-58389829 | None:intergenic | 30.0% |
| ! | ACAATGTATCTGAAGTTATC+AGG | + | chr4_4:58389811-58389830 | None:intergenic | 30.0% |
| CTTCAGATACATTGTATGTT+AGG | - | chr4_4:58389816-58389835 | Msa0690540:intron | 30.0% | |
| TGTCTTCAAAGCTGAAAAAT+AGG | + | chr4_4:58389856-58389875 | None:intergenic | 30.0% | |
| CTTGATTGTGAACGCAAAAT+GGG | + | chr4_4:58383999-58384018 | None:intergenic | 35.0% | |
| TCTTGATTGTGAACGCAAAA+TGG | + | chr4_4:58384000-58384019 | None:intergenic | 35.0% | |
| AAGAATGGGAGAATCATAGA+TGG | + | chr4_4:58384144-58384163 | None:intergenic | 35.0% | |
| TCTTGATCTTCTCTTTCATG+GGG | - | chr4_4:58384160-58384179 | Msa0690540:CDS | 35.0% | |
| TGGATAAGAGAAACCCATTA+AGG | - | chr4_4:58384262-58384281 | Msa0690540:CDS | 35.0% | |
| AGAAACCCATTAAGGAAATG+AGG | - | chr4_4:58384270-58384289 | Msa0690540:CDS | 35.0% | |
| !! | AGGAAATGAGGTGTTTTTGT+TGG | - | chr4_4:58384282-58384301 | Msa0690540:CDS | 35.0% |
| !!! | TGTTGTGATTTTTTAGGCTC+AGG | - | chr4_4:58384368-58384387 | Msa0690540:intron | 35.0% |
| ACTCTTCTATCTGTGAAAAC+TGG | - | chr4_4:58384432-58384451 | Msa0690540:intron | 35.0% | |
| CTCTTCTATCTGTGAAAACT+GGG | - | chr4_4:58384433-58384452 | Msa0690540:intron | 35.0% | |
| TCTTCTATCTGTGAAAACTG+GGG | - | chr4_4:58384434-58384453 | Msa0690540:intron | 35.0% | |
| GTATCATATCTAGAGGATTG+AGG | + | chr4_4:58384486-58384505 | None:intergenic | 35.0% | |
| CAATCCTCTAGATATGATAC+AGG | - | chr4_4:58384486-58384505 | Msa0690540:intron | 35.0% | |
| AAGTCCTGTATCATATCTAG+AGG | + | chr4_4:58384493-58384512 | None:intergenic | 35.0% | |
| ! | AGGTCAAAAGCTTTTGAACA+AGG | - | chr4_4:58384515-58384534 | Msa0690540:intron | 35.0% |
| ATAAAAGACTACCTTGACTG+CGG | + | chr4_4:58384556-58384575 | None:intergenic | 35.0% | |
| AGCATTTGGATCAATACACT+TGG | - | chr4_4:58384653-58384672 | Msa0690540:intron | 35.0% | |
| GGAAATTGATCCCAAAAATC+AGG | - | chr4_4:58384709-58384728 | Msa0690540:intron | 35.0% | |
| TGGCTAACTGAAATATTCCA+GGG | - | chr4_4:58384758-58384777 | Msa0690540:intron | 35.0% | |
| !! | CCAGGGATTTTGTTTAAAAG+GGG | - | chr4_4:58384775-58384794 | Msa0690540:intron | 35.0% |
| ! | ATAGCTACCAAAAGAGCATA+AGG | + | chr4_4:58384862-58384881 | None:intergenic | 35.0% |
| !! | CAGTACAATGAAGGTATTGT+TGG | + | chr4_4:58384982-58385001 | None:intergenic | 35.0% |
| GGCATAAAACAGTACAATGA+AGG | + | chr4_4:58384991-58385010 | None:intergenic | 35.0% | |
| ! | CATTGTACTGTTTTATGCCA+AGG | - | chr4_4:58384992-58385011 | Msa0690540:intron | 35.0% |
| AACAAGAGGATTGTGAAGTT+TGG | - | chr4_4:58385127-58385146 | Msa0690540:intron | 35.0% | |
| CAAACAAGCAAAAAGATGCA+TGG | + | chr4_4:58385323-58385342 | None:intergenic | 35.0% | |
| ! | CATGCATCTTTTTGCTTGTT+TGG | - | chr4_4:58385321-58385340 | Msa0690540:intron | 35.0% |
| TTCAAGTATCTGCTTGAAGT+TGG | + | chr4_4:58385459-58385478 | None:intergenic | 35.0% | |
| !!! | TCTTTGTCATTTTAGGGGTA+TGG | - | chr4_4:58385693-58385712 | Msa0690540:intron | 35.0% |
| !!! | CTTTGTCATTTTAGGGGTAT+GGG | - | chr4_4:58385694-58385713 | Msa0690540:intron | 35.0% |
| !!! | TTTGTCATTTTAGGGGTATG+GGG | - | chr4_4:58385695-58385714 | Msa0690540:intron | 35.0% |
| ATCACAATCTTGACACTTCA+AGG | - | chr4_4:58385797-58385816 | Msa0690540:intron | 35.0% | |
| TCACAATCTTGACACTTCAA+GGG | - | chr4_4:58385798-58385817 | Msa0690540:intron | 35.0% | |
| ATCCAAACATCATCACAACA+AGG | - | chr4_4:58385827-58385846 | Msa0690540:intron | 35.0% | |
| ! | GAACAAACTCGAGAGTTTTT+AGG | + | chr4_4:58385867-58385886 | None:intergenic | 35.0% |
| CTATCTGTATCATCTGTATC+TGG | + | chr4_4:58386025-58386044 | None:intergenic | 35.0% | |
| CTATCTGTATCATCTGTATC+TGG | + | chr4_4:58386025-58386044 | None:intergenic | 35.0% | |
| AATGGATGAGATTCATGCAA+CGG | + | chr4_4:58386220-58386239 | None:intergenic | 35.0% | |
| GCTCTTGACTGTTGAAATTT+GGG | - | chr4_4:58386530-58386549 | Msa0690540:intron | 35.0% | |
| CTCTTGACTGTTGAAATTTG+GGG | - | chr4_4:58386531-58386550 | Msa0690540:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4_4:58386555-58386574 | Msa0690540:intron | 35.0% | |
| AACAAGATTCAAGCGTATCA+AGG | + | chr4_4:58386725-58386744 | None:intergenic | 35.0% | |
| ! | ACGCTTGAATCTTGTTTATG+TGG | - | chr4_4:58386729-58386748 | Msa0690540:intron | 35.0% |
| TCAAAGTGGAGTCAACAAAT+TGG | - | chr4_4:58386793-58386812 | Msa0690540:intron | 35.0% | |
| TCACTTGATCCAGTAATTAG+AGG | - | chr4_4:58386836-58386855 | Msa0690540:intron | 35.0% | |
| CACTTGATCCAGTAATTAGA+GGG | - | chr4_4:58386837-58386856 | Msa0690540:intron | 35.0% | |
| AGCAATATCCCTCTAATTAC+TGG | + | chr4_4:58386848-58386867 | None:intergenic | 35.0% | |
| GGAACAAAAGGTCTAGAAAT+AGG | + | chr4_4:58386939-58386958 | None:intergenic | 35.0% | |
| GTAGAGCTGTCAATTTGATA+TGG | - | chr4_4:58387252-58387271 | Msa0690540:intron | 35.0% | |
| TTTAAACCCCCTTTACATGT+GGG | + | chr4_4:58387298-58387317 | None:intergenic | 35.0% | |
| ! | TTTTAAACCCCCTTTACATG+TGG | + | chr4_4:58387299-58387318 | None:intergenic | 35.0% |
| ! | AAATTGGCCCCATTTTACAT+AGG | - | chr4_4:58387330-58387349 | Msa0690540:intron | 35.0% |
| TATTGGGGCCTATGTAAAAT+GGG | + | chr4_4:58387341-58387360 | None:intergenic | 35.0% | |
| TTGTAGGGCTTAACACTATT+GGG | + | chr4_4:58387357-58387376 | None:intergenic | 35.0% | |
| TTTGTAGGGCTTAACACTAT+TGG | + | chr4_4:58387358-58387377 | None:intergenic | 35.0% | |
| ! | GGGCTGATGTATATTTTGTA+GGG | + | chr4_4:58387372-58387391 | None:intergenic | 35.0% |
| ! | TGGGCTGATGTATATTTTGT+AGG | + | chr4_4:58387373-58387392 | None:intergenic | 35.0% |
| ! | ACTTTTCGCCTGAAAATTTC+TGG | + | chr4_4:58387526-58387545 | None:intergenic | 35.0% |
| !! | AGAAATTTTCAGGCGAAAAG+TGG | - | chr4_4:58387525-58387544 | Msa0690540:intron | 35.0% |
| !!! | TAATGTGGGCTTTTTAAGTG+GGG | - | chr4_4:58387829-58387848 | Msa0690540:intron | 35.0% |
| TAATCATAGCTTCAGAGTAG+AGG | + | chr4_4:58387881-58387900 | None:intergenic | 35.0% | |
| ! | GTCTTCTGCTGGTAATTTTA+TGG | - | chr4_4:58387954-58387973 | Msa0690540:CDS | 35.0% |
| ! | TTTGAAGACCAAACTGACTT+AGG | - | chr4_4:58388034-58388053 | Msa0690540:intron | 35.0% |
| !!! | GTCGCAAGTTTTAGATCATT+TGG | - | chr4_4:58388475-58388494 | Msa0690540:intron | 35.0% |
| !!! | CGCAAGTTTTAGATCATTTG+GGG | - | chr4_4:58388477-58388496 | Msa0690540:intron | 35.0% |
| !! | TCCCAAAAACTAGTCTTCTA+TGG | + | chr4_4:58388512-58388531 | None:intergenic | 35.0% |
| AAGGGCTTATATGTAAGCAA+TGG | + | chr4_4:58388656-58388675 | None:intergenic | 35.0% | |
| GGATTGCAATGAAAAGTCAA+GGG | + | chr4_4:58388674-58388693 | None:intergenic | 35.0% | |
| TGGATTGCAATGAAAAGTCA+AGG | + | chr4_4:58388675-58388694 | None:intergenic | 35.0% | |
| GACCTTGAACAAACTTTCTT+TGG | + | chr4_4:58388695-58388714 | None:intergenic | 35.0% | |
| AGTAGTTGAGAACTGTTTAC+AGG | - | chr4_4:58388816-58388835 | Msa0690540:intron | 35.0% | |
| CTGTTTACAGGTGGAATTAT+CGG | - | chr4_4:58388828-58388847 | Msa0690540:intron | 35.0% | |
| TGTTTACAGGTGGAATTATC+GGG | - | chr4_4:58388829-58388848 | Msa0690540:intron | 35.0% | |
| ATCTATAGCAAGAACGAAGA+AGG | - | chr4_4:58389007-58389026 | Msa0690540:intron | 35.0% | |
| TCAAAAGGTGGTATATTTGC+AGG | + | chr4_4:58389139-58389158 | None:intergenic | 35.0% | |
| TGGGCATTAAAATCAAAAGG+TGG | + | chr4_4:58389151-58389170 | None:intergenic | 35.0% | |
| ! | TTTTCCAGCCTGTTGAAATA+TGG | - | chr4_4:58389435-58389454 | Msa0690540:intron | 35.0% |
| TTTCCAGCCTGTTGAAATAT+GGG | - | chr4_4:58389436-58389455 | Msa0690540:intron | 35.0% | |
| ATCATCTCCCATATTTCAAC+AGG | + | chr4_4:58389446-58389465 | None:intergenic | 35.0% | |
| TATCACAATGCCAAAAGCAA+TGG | - | chr4_4:58389487-58389506 | Msa0690540:intron | 35.0% | |
| TTCACCAGCAAAGATAGAAT+TGG | + | chr4_4:58389579-58389598 | None:intergenic | 35.0% | |
| ! | GGATGATGATGAAACTAATG+AGG | - | chr4_4:58389685-58389704 | Msa0690540:CDS | 35.0% |
| AGCTGCTGATGAAGTTGAAA+AGG | + | chr4_4:58384054-58384073 | None:intergenic | 40.0% | |
| !!! | GTTTCTGGGGCCATATTTTA+TGG | + | chr4_4:58384096-58384115 | None:intergenic | 40.0% |
| TCTTTGGTCCAATCGTTTCT+GGG | + | chr4_4:58384110-58384129 | None:intergenic | 40.0% | |
| ! | GATGGATTTGACTTCCTCTT+TGG | + | chr4_4:58384126-58384145 | None:intergenic | 40.0% |
| CTTCTATCTGTGAAAACTGG+GGG | - | chr4_4:58384435-58384454 | Msa0690540:intron | 40.0% | |
| TTCTATCTGTGAAAACTGGG+GGG | - | chr4_4:58384436-58384455 | Msa0690540:intron | 40.0% | |
| AGTCGAGGAAAATGGATAAG+TGG | - | chr4_4:58384688-58384707 | Msa0690540:intron | 40.0% | |
| GTGGCTAACTGAAATATTCC+AGG | - | chr4_4:58384757-58384776 | Msa0690540:intron | 40.0% | |
| ! | CCCCTTTTAAACAAAATCCC+TGG | + | chr4_4:58384778-58384797 | None:intergenic | 40.0% |
| GCATAAGGCTCACAGAAATA+AGG | + | chr4_4:58384847-58384866 | None:intergenic | 40.0% | |
| GGTACAAATTGCAATGGCTT+TGG | + | chr4_4:58384961-58384980 | None:intergenic | 40.0% | |
| !! | TGTATCGTGTTTTTCGGATG+TGG | - | chr4_4:58385096-58385115 | Msa0690540:intron | 40.0% |
| ATGTGGCTCTTCAAAACAAG+AGG | - | chr4_4:58385113-58385132 | Msa0690540:intron | 40.0% | |
| ! | CTTTAGAGGGTAAAGAGCAA+CGG | + | chr4_4:58385270-58385289 | None:intergenic | 40.0% |
| GTGAAGGAATGCACTTTAGA+GGG | + | chr4_4:58385283-58385302 | None:intergenic | 40.0% | |
| AACCTAATAATTGGTTGGCG+TGG | - | chr4_4:58385582-58385601 | Msa0690540:intron | 40.0% | |
| ATCTTTATCCAGCATGCCAA+GGG | + | chr4_4:58385737-58385756 | None:intergenic | 40.0% | |
| ! | GTCCTTGTTGTGATGATGTT+TGG | + | chr4_4:58385832-58385851 | None:intergenic | 40.0% |
| GCAGGGATTAATGTTTGTAG+TGG | - | chr4_4:58385892-58385911 | Msa0690540:intron | 40.0% | |
| ACAGGTTTCATGGTATTCGA+TGG | + | chr4_4:58385934-58385953 | None:intergenic | 40.0% | |
| GGCTCTTGACTGTTGAAATT+TGG | - | chr4_4:58386529-58386548 | Msa0690540:intron | 40.0% | |
| ! | AGAGTCTTATCTATCCGATG+TGG | - | chr4_4:58386620-58386639 | Msa0690540:intron | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | - | chr4_4:58386621-58386640 | Msa0690540:intron | 40.0% |
| AATTGACAGCTCTACTTCAG+AGG | + | chr4_4:58387247-58387266 | None:intergenic | 40.0% | |
| GCTGTCAATTTGATATGGCT+TGG | - | chr4_4:58387257-58387276 | Msa0690540:intron | 40.0% | |
| ATTGGGGCCTATGTAAAATG+GGG | + | chr4_4:58387340-58387359 | None:intergenic | 40.0% | |
| CTATTGGGGCCTATGTAAAA+TGG | + | chr4_4:58387342-58387361 | None:intergenic | 40.0% | |
| TGTAGGGCTTAACACTATTG+GGG | + | chr4_4:58387356-58387375 | None:intergenic | 40.0% | |
| TGAAAAAAGATGGGGCTTGT+GGG | + | chr4_4:58387392-58387411 | None:intergenic | 40.0% | |
| !! | AATTTTCAGGCGAAAAGTGG+TGG | - | chr4_4:58387528-58387547 | Msa0690540:intron | 40.0% |
| ATTAAAAAATCAGCCACCGC+CGG | + | chr4_4:58387605-58387624 | None:intergenic | 40.0% | |
| ! | TTTTGTGGGCTTAGTGACAA+AGG | + | chr4_4:58387742-58387761 | None:intergenic | 40.0% |
| ! | TTAAGTGGGGCTTTGCATTT+TGG | - | chr4_4:58387842-58387861 | Msa0690540:intron | 40.0% |
| ! | TAAGTGGGGCTTTGCATTTT+GGG | - | chr4_4:58387843-58387862 | Msa0690540:intron | 40.0% |
| ATTCTTACTGTGTCTTCTGC+TGG | - | chr4_4:58387943-58387962 | Msa0690540:CDS | 40.0% | |
| ATGCTGTACAGTATGAGACT+AGG | + | chr4_4:58388214-58388233 | None:intergenic | 40.0% | |
| !! | GAGATCCTGAGTTTTGATCA+TGG | - | chr4_4:58388602-58388621 | Msa0690540:intron | 40.0% |
| ! | AGCTAGGATTTTATCTCGAG+GGG | + | chr4_4:58388630-58388649 | None:intergenic | 40.0% |
| ! | GAGCTAGGATTTTATCTCGA+GGG | + | chr4_4:58388631-58388650 | None:intergenic | 40.0% |
| GGCTTATATGTAAGCAATGG+AGG | + | chr4_4:58388653-58388672 | None:intergenic | 40.0% | |
| AGTTGAGAACTGTTTACAGG+TGG | - | chr4_4:58388819-58388838 | Msa0690540:intron | 40.0% | |
| ! | AGTCCTAGTTGATGCTGTTA+GGG | - | chr4_4:58389248-58389267 | Msa0690540:CDS | 40.0% |
| ! | GATAACCTGACCATTGCTTT+TGG | + | chr4_4:58389500-58389519 | None:intergenic | 40.0% |
| GTTTCATCATCATCCAAGCT+TGG | + | chr4_4:58389680-58389699 | None:intergenic | 40.0% | |
| ! | AGCTGCTTCTTCTAGTTAGT+TGG | - | chr4_4:58389724-58389743 | Msa0690540:CDS | 40.0% |
| CTACTCTCTTCCTCCTTTAT+AGG | - | chr4_4:58389781-58389800 | Msa0690540:five_prime_UTR | 40.0% | |
| AATATGGCCCCAGAAACGAT+TGG | - | chr4_4:58384099-58384118 | Msa0690540:CDS | 45.0% | |
| CTTTGGTCCAATCGTTTCTG+GGG | + | chr4_4:58384109-58384128 | None:intergenic | 45.0% | |
| CTCTTTGGTCCAATCGTTTC+TGG | + | chr4_4:58384111-58384130 | None:intergenic | 45.0% | |
| CAGAAACGATTGGACCAAAG+AGG | - | chr4_4:58384109-58384128 | Msa0690540:CDS | 45.0% | |
| GAACAAGGATGCTGTTCTTC+AGG | - | chr4_4:58384530-58384549 | Msa0690540:intron | 45.0% | |
| AAAGGGGAATCTGACTCCAA+TGG | - | chr4_4:58384791-58384810 | Msa0690540:CDS | 45.0% | |
| !! | CTGTGAGCCTTATGCTCTTT+TGG | - | chr4_4:58384852-58384871 | Msa0690540:CDS | 45.0% |
| CGTGAAGGAATGCACTTTAG+AGG | + | chr4_4:58385284-58385303 | None:intergenic | 45.0% | |
| TTGTATACGCACATGCGTGA+AGG | + | chr4_4:58385299-58385318 | None:intergenic | 45.0% | |
| ! | TTGTTCTAGGCTAAAGAGGC+TGG | - | chr4_4:58385380-58385399 | Msa0690540:intron | 45.0% |
| ! | TGTTCTAGGCTAAAGAGGCT+GGG | - | chr4_4:58385381-58385400 | Msa0690540:intron | 45.0% |
| GTCCACGCCAACCAATTATT+AGG | + | chr4_4:58385587-58385606 | None:intergenic | 45.0% | |
| !! | TCATTTTAGGGGTATGGGGA+TGG | - | chr4_4:58385699-58385718 | Msa0690540:intron | 45.0% |
| GATCTTTATCCAGCATGCCA+AGG | + | chr4_4:58385738-58385757 | None:intergenic | 45.0% | |
| TGGCATGCTGGATAAAGATC+AGG | - | chr4_4:58385738-58385757 | Msa0690540:intron | 45.0% | |
| ATGCTGGATAAAGATCAGGC+TGG | - | chr4_4:58385742-58385761 | Msa0690540:intron | 45.0% | |
| ! | TCGAGTTTGTTCGTGATGCA+GGG | - | chr4_4:58385875-58385894 | Msa0690540:intron | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4_4:58386567-58386586 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4_4:58386564-58386583 | Msa0690540:intron | 45.0% |
| ACAATCCTCACCTTACAAGC+CGG | + | chr4_4:58386577-58386596 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | - | chr4_4:58386627-58386646 | Msa0690540:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | - | chr4_4:58386628-58386647 | Msa0690540:intron | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | + | chr4_4:58386637-58386656 | None:intergenic | 45.0% | |
| ! | TAAAGACTTTAGGGGGACCA+CGG | + | chr4_4:58387107-58387126 | None:intergenic | 45.0% |
| CTGAAAAAAGATGGGGCTTG+TGG | + | chr4_4:58387393-58387412 | None:intergenic | 45.0% | |
| GCTTAGTGACAAAGGCTTCA+AGG | + | chr4_4:58387734-58387753 | None:intergenic | 45.0% | |
| AAGAAGGGGGCCAACAAAAA+TGG | - | chr4_4:58387802-58387821 | Msa0690540:intron | 45.0% | |
| AGAAGGGGGCCAACAAAAAT+GGG | - | chr4_4:58387803-58387822 | Msa0690540:intron | 45.0% | |
| ! | AAGTGGGGCTTTGCATTTTG+GGG | - | chr4_4:58387844-58387863 | Msa0690540:intron | 45.0% |
| GGGTCTTTCCTAAGTCAGTT+TGG | + | chr4_4:58388045-58388064 | None:intergenic | 45.0% | |
| CTGTACAGTATGAGACTAGG+AGG | + | chr4_4:58388211-58388230 | None:intergenic | 45.0% | |
| GCATGCAGAACTATTGACAG+AGG | - | chr4_4:58388230-58388249 | Msa0690540:intron | 45.0% | |
| ! | GCTAGGATTTTATCTCGAGG+GGG | + | chr4_4:58388629-58388648 | None:intergenic | 45.0% |
| ! | GGAGCTAGGATTTTATCTCG+AGG | + | chr4_4:58388632-58388651 | None:intergenic | 45.0% |
| ATGTAAGCAATGGAGGAGCT+AGG | + | chr4_4:58388646-58388665 | None:intergenic | 45.0% | |
| GCATTAATGGGAACACTCTC+TGG | + | chr4_4:58388918-58388937 | None:intergenic | 45.0% | |
| TCACCTTCTGATCCTGAAGA+GGG | + | chr4_4:58388962-58388981 | None:intergenic | 45.0% | |
| ! | TGCGCATCTTTAGCAGCTTT+TGG | - | chr4_4:58389031-58389050 | Msa0690540:intron | 45.0% |
| ! | GCGCATCTTTAGCAGCTTTT+GGG | - | chr4_4:58389032-58389051 | Msa0690540:intron | 45.0% |
| ! | GAGTCCTAGTTGATGCTGTT+AGG | - | chr4_4:58389247-58389266 | Msa0690540:CDS | 45.0% |
| TCTCCCATATTTCAACAGGC+TGG | + | chr4_4:58389442-58389461 | None:intergenic | 45.0% | |
| GATGATCCGCATGATTGCAA+CGG | - | chr4_4:58389460-58389479 | Msa0690540:intron | 45.0% | |
| CAATGCCAAAAGCAATGGTC+AGG | - | chr4_4:58389492-58389511 | Msa0690540:intron | 45.0% | |
| GGTGCCAATTCTATCTTTGC+TGG | - | chr4_4:58389572-58389591 | Msa0690540:intron | 45.0% | |
| ! | TCATCCAAGCTTGGAGCTTT+TGG | + | chr4_4:58389671-58389690 | None:intergenic | 45.0% |
| AGGAGGAAGAGAGTAGTTGA+AGG | + | chr4_4:58389777-58389796 | None:intergenic | 45.0% | |
| GTTATCAGGGGAGCCTATAA+AGG | + | chr4_4:58389797-58389816 | None:intergenic | 45.0% | |
| GGGAATCTGACTCCAATGGT+TGG | - | chr4_4:58384795-58384814 | Msa0690540:CDS | 50.0% | |
| !!! | TGGGAGTACTCGCTTTTGCA+TGG | - | chr4_4:58385400-58385419 | Msa0690540:intron | 50.0% |
| !!! | GGGAGTACTCGCTTTTGCAT+GGG | - | chr4_4:58385401-58385420 | Msa0690540:intron | 50.0% |
| !! | TTTTAGGGGTATGGGGATGG+AGG | - | chr4_4:58385702-58385721 | Msa0690540:intron | 50.0% |
| ! | CTCGAGTTTGTTCGTGATGC+AGG | - | chr4_4:58385874-58385893 | Msa0690540:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr4_4:58386569-58386588 | Msa0690540:intron | 50.0% |
| TTCACTGCAATCCACCACAG+TGG | - | chr4_4:58387071-58387090 | Msa0690540:intron | 50.0% | |
| !!! | GTGGCGGACCAGAAATTTTC+AGG | - | chr4_4:58387515-58387534 | Msa0690540:intron | 50.0% |
| TTTCAGGCGAAAAGTGGTGG+TGG | - | chr4_4:58387531-58387550 | Msa0690540:intron | 50.0% | |
| GAAGGGGGCCAACAAAAATG+GGG | - | chr4_4:58387804-58387823 | Msa0690540:intron | 50.0% | |
| GGGGTCCATGATCAAAACTC+AGG | + | chr4_4:58388610-58388629 | None:intergenic | 50.0% | |
| ACAGGTGGAATTATCGGGCT+TGG | - | chr4_4:58388834-58388853 | Msa0690540:intron | 50.0% | |
| GGAACACTCTCTGGATGTGT+AGG | + | chr4_4:58388909-58388928 | None:intergenic | 50.0% | |
| TGTAAAGGGAACCCCTCTTC+AGG | - | chr4_4:58388947-58388966 | Msa0690540:intron | 50.0% | |
| AACCCCTCTTCAGGATCAGA+AGG | - | chr4_4:58388956-58388975 | Msa0690540:intron | 50.0% | |
| CACCTTCTGATCCTGAAGAG+GGG | + | chr4_4:58388961-58388980 | None:intergenic | 50.0% | |
| CTCACCTTCTGATCCTGAAG+AGG | + | chr4_4:58388963-58388982 | None:intergenic | 50.0% | |
| CAGCCCTAACAGCATCAACT+AGG | + | chr4_4:58389254-58389273 | None:intergenic | 50.0% | |
| ! | CTAGTTGATGCTGTTAGGGC+TGG | - | chr4_4:58389252-58389271 | Msa0690540:CDS | 50.0% |
| ! | CTGTTAGGGCTGGTGGTTAT+TGG | - | chr4_4:58389262-58389281 | Msa0690540:CDS | 50.0% |
| ! | TACGTGCCGTTGCAATCATG+CGG | + | chr4_4:58389469-58389488 | None:intergenic | 50.0% |
| GCAATGGTCAGGTTATCTGC+CGG | - | chr4_4:58389503-58389522 | Msa0690540:intron | 50.0% | |
| ! | AGAAAGCACAATGCCTGCTC+AGG | + | chr4_4:58389548-58389567 | None:intergenic | 50.0% |
| ! | CAGGCATTGTGCTTTCTAGC+TGG | - | chr4_4:58389551-58389570 | Msa0690540:intron | 50.0% |
| GCTTCCAAAAGCTCCAAGCT+TGG | - | chr4_4:58389664-58389683 | Msa0690540:CDS | 50.0% | |
| ATCAGGGGAGCCTATAAAGG+AGG | + | chr4_4:58389794-58389813 | None:intergenic | 50.0% | |
| ! | GAAAACTGGGGGGTGTAGTG+AGG | - | chr4_4:58384446-58384465 | Msa0690540:intron | 55.0% |
| TGTTCTTCAGGCCGCAGTCA+AGG | - | chr4_4:58384542-58384561 | Msa0690540:intron | 55.0% | |
| GCTGCATGGAGGGATACGAT+AGG | - | chr4_4:58385425-58385444 | Msa0690540:intron | 55.0% | |
| ! | ATGGAGGTGTGTTGCACCCT+TGG | - | chr4_4:58385718-58385737 | Msa0690540:intron | 55.0% |
| TCAGGCTGGTGAGCTCAAGA+AGG | - | chr4_4:58385756-58385775 | Msa0690540:intron | 55.0% | |
| AGCCCCAGCCCACATGTAAA+GGG | - | chr4_4:58387287-58387306 | Msa0690540:intron | 55.0% | |
| ACCCCCTTTACATGTGGGCT+GGG | + | chr4_4:58387293-58387312 | None:intergenic | 55.0% | |
| AACCCCCTTTACATGTGGGC+TGG | + | chr4_4:58387294-58387313 | None:intergenic | 55.0% | |
| AGCTGTTCGGTCAACAGCAG+AGG | - | chr4_4:58387432-58387451 | Msa0690540:intron | 55.0% | |
| TCAACAGCAGAGGTCAACGC+CGG | - | chr4_4:58387442-58387461 | Msa0690540:intron | 55.0% | |
| !! | AAATTTCTGGTCCGCCACCG+TGG | + | chr4_4:58387513-58387532 | None:intergenic | 55.0% |
| !! | AGGCGAAAAGTGGTGGTGGA+CGG | - | chr4_4:58387535-58387554 | Msa0690540:intron | 55.0% |
| GACTTAGGAAAGACCCGCTC+TGG | - | chr4_4:58388049-58388068 | Msa0690540:intron | 55.0% | |
| TATCGGGCTTGGAGAAGCAG+AGG | - | chr4_4:58388845-58388864 | Msa0690540:intron | 55.0% | |
| GAAGCAGAGGAAGACCGTGT+AGG | - | chr4_4:58388858-58388877 | Msa0690540:intron | 55.0% | |
| GTTGATGCTGTTAGGGCTGG+TGG | - | chr4_4:58389255-58389274 | Msa0690540:CDS | 55.0% | |
| GGTTATCTGCCGGCAGAGTT+CGG | - | chr4_4:58389513-58389532 | Msa0690540:intron | 55.0% | |
| !! | GCTTTTGCATGGGCGCTGCA+TGG | - | chr4_4:58385411-58385430 | Msa0690540:intron | 60.0% |
| ! | TTTGCATGGGCGCTGCATGG+AGG | - | chr4_4:58385414-58385433 | Msa0690540:intron | 60.0% |
| ! | TTGCATGGGCGCTGCATGGA+GGG | - | chr4_4:58385415-58385434 | Msa0690540:intron | 60.0% |
| GTGTTGCACCCTTGGCATGC+TGG | - | chr4_4:58385726-58385745 | Msa0690540:intron | 60.0% | |
| GCTGGTGAGCTCAAGAAGGC+AGG | - | chr4_4:58385760-58385779 | Msa0690540:intron | 60.0% | |
| TCCACCACAGTGGCCTACTG+AGG | - | chr4_4:58387081-58387100 | Msa0690540:intron | 60.0% | |
| CAGCCCCAGCCCACATGTAA+AGG | - | chr4_4:58387286-58387305 | Msa0690540:intron | 60.0% | |
| GCCCCAGCCCACATGTAAAG+GGG | - | chr4_4:58387288-58387307 | Msa0690540:intron | 60.0% | |
| ! | CCCCCTTTACATGTGGGCTG+GGG | + | chr4_4:58387292-58387311 | None:intergenic | 60.0% |
| CCCCAGCCCACATGTAAAGG+GGG | - | chr4_4:58387289-58387308 | Msa0690540:intron | 60.0% | |
| !! | CGAAAAGTGGTGGTGGACGG+CGG | - | chr4_4:58387538-58387557 | Msa0690540:intron | 60.0% |
| ACCGACCAACACCAGAGCTC+CGG | + | chr4_4:58387564-58387583 | None:intergenic | 60.0% | |
| !! | AGCTCTGGTGTTGGTCGGTG+CGG | - | chr4_4:58387565-58387584 | Msa0690540:intron | 60.0% |
| CACGGAGAACCGAACTCTGC+CGG | + | chr4_4:58389525-58389544 | None:intergenic | 60.0% | |
| GCACAATGCCTGCTCAGGCA+CGG | + | chr4_4:58389543-58389562 | None:intergenic | 60.0% | |
| GCCTCAGTAGGCCACTGTGG+TGG | + | chr4_4:58387085-58387104 | None:intergenic | 65.0% | |
| ACGGCCTCAGTAGGCCACTG+TGG | + | chr4_4:58387088-58387107 | None:intergenic | 65.0% | |
| ACAGTGGCCTACTGAGGCCG+TGG | - | chr4_4:58387087-58387106 | Msa0690540:intron | 65.0% | |
| AGAGGTCAACGCCGGAGCTC+CGG | - | chr4_4:58387450-58387469 | Msa0690540:intron | 65.0% | |
| !! | GCCGGAGCTCTGGTGTTGGT+CGG | - | chr4_4:58387560-58387579 | Msa0690540:intron | 65.0% |
| !! | TCTGGTGTTGGTCGGTGCGG+TGG | - | chr4_4:58387568-58387587 | Msa0690540:intron | 65.0% |
| TTGGTCGGTGCGGTGGTTGC+CGG | - | chr4_4:58387575-58387594 | Msa0690540:intron | 65.0% | |
| TCGGTTCTCCGTGCCTGAGC+AGG | - | chr4_4:58389532-58389551 | Msa0690540:intron | 65.0% | |
| AGGGGGACCACGGCCTCAGT+AGG | + | chr4_4:58387097-58387116 | None:intergenic | 70.0% | |
| !! | AAGTGGTGGTGGACGGCGGC+CGG | - | chr4_4:58387542-58387561 | Msa0690540:intron | 70.0% |
| TGCGGTGGTTGCCGGAGCTC+CGG | - | chr4_4:58387583-58387602 | Msa0690540:intron | 70.0% | |
| ATCAGCCACCGCCGGAGCTC+CGG | + | chr4_4:58387597-58387616 | None:intergenic | 70.0% | |
| ACCACGGTCGGCCGGAGCTC+CGG | + | chr4_4:58387464-58387483 | None:intergenic | 75.0% | |
| CCGGAACCACCACGGTCGGC+CGG | + | chr4_4:58387472-58387491 | None:intergenic | 75.0% | |
| CCGGCCGACCGTGGTGGTTC+CGG | - | chr4_4:58387469-58387488 | Msa0690540:intron | 75.0% | |
| GCCGACCGTGGTGGTTCCGG+CGG | - | chr4_4:58387472-58387491 | Msa0690540:intron | 75.0% | |
| GCCGCCGGAACCACCACGGT+CGG | + | chr4_4:58387476-58387495 | None:intergenic | 75.0% | |
| GACCGTGGTGGTTCCGGCGG+CGG | - | chr4_4:58387475-58387494 | Msa0690540:intron | 75.0% | |
| CTCCGCCGCCGGAACCACCA+CGG | + | chr4_4:58387480-58387499 | None:intergenic | 75.0% | |
| TGGTTCCGGCGGCGGAGCTC+CGG | - | chr4_4:58387483-58387502 | Msa0690540:intron | 75.0% | |
| GGCGGAGCTCCGGCGATCCA+CGG | - | chr4_4:58387493-58387512 | Msa0690540:intron | 75.0% | |
| GGAGCTCCGGCGATCCACGG+TGG | - | chr4_4:58387496-58387515 | Msa0690540:intron | 75.0% | |
| GCTCCGGCGATCCACGGTGG+CGG | - | chr4_4:58387499-58387518 | Msa0690540:intron | 75.0% | |
| GGTCCGCCACCGTGGATCGC+CGG | + | chr4_4:58387505-58387524 | None:intergenic | 75.0% | |
| ! | GGCGGCCGGAGCTCTGGTGT+TGG | - | chr4_4:58387556-58387575 | Msa0690540:intron | 75.0% |
| GGTGGTTGCCGGAGCTCCGG+CGG | - | chr4_4:58387586-58387605 | Msa0690540:intron | 75.0% | |
| ! | GGAGCTCCGGCCGACCGTGG+TGG | - | chr4_4:58387463-58387482 | Msa0690540:intron | 80.0% |
| ! | GATCGCCGGAGCTCCGCCGC+CGG | + | chr4_4:58387491-58387510 | None:intergenic | 80.0% |
| ! | GTGGACGGCGGCCGGAGCTC+TGG | - | chr4_4:58387550-58387569 | Msa0690540:intron | 80.0% |
| ! | GGTTGCCGGAGCTCCGGCGG+TGG | - | chr4_4:58387589-58387608 | Msa0690540:intron | 80.0% |
| ! | GCCGGAGCTCCGGCCGACCG+TGG | - | chr4_4:58387460-58387479 | Msa0690540:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 58383806 | 58389952 | 58383806 | ID=Msa0690540;Name=Msa0690540 |
| chr4_4 | mRNA | 58383806 | 58389952 | 58383806 | ID=Msa0690540-mRNA-1;Parent=Msa0690540;Name=Msa0690540-mRNA-1;_AED=0.05;_eAED=0.05;_QI=152|0.83|0.85|1|0.5|0.57|7|210|375 |
| chr4_4 | exon | 58383806 | 58384315 | 58383806 | ID=Msa0690540-mRNA-1:exon:15709;Parent=Msa0690540-mRNA-1 |
| chr4_4 | exon | 58384781 | 58384920 | 58384781 | ID=Msa0690540-mRNA-1:exon:15708;Parent=Msa0690540-mRNA-1 |
| chr4_4 | exon | 58387845 | 58388050 | 58387845 | ID=Msa0690540-mRNA-1:exon:15707;Parent=Msa0690540-mRNA-1 |
| chr4_4 | exon | 58388263 | 58388369 | 58388263 | ID=Msa0690540-mRNA-1:exon:15706;Parent=Msa0690540-mRNA-1 |
| chr4_4 | exon | 58389195 | 58389368 | 58389195 | ID=Msa0690540-mRNA-1:exon:15705;Parent=Msa0690540-mRNA-1 |
| chr4_4 | exon | 58389577 | 58389818 | 58389577 | ID=Msa0690540-mRNA-1:exon:15704;Parent=Msa0690540-mRNA-1 |
| chr4_4 | exon | 58389842 | 58389952 | 58389842 | ID=Msa0690540-mRNA-1:exon:15703;Parent=Msa0690540-mRNA-1 |
| chr4_4 | five_prime_UTR | 58389842 | 58389952 | 58389842 | ID=Msa0690540-mRNA-1:five_prime_utr;Parent=Msa0690540-mRNA-1 |
| chr4_4 | five_prime_UTR | 58389778 | 58389818 | 58389778 | ID=Msa0690540-mRNA-1:five_prime_utr;Parent=Msa0690540-mRNA-1 |
| chr4_4 | CDS | 58389577 | 58389777 | 58389577 | ID=Msa0690540-mRNA-1:cds;Parent=Msa0690540-mRNA-1 |
| chr4_4 | CDS | 58389195 | 58389368 | 58389195 | ID=Msa0690540-mRNA-1:cds;Parent=Msa0690540-mRNA-1 |
| chr4_4 | CDS | 58388263 | 58388369 | 58388263 | ID=Msa0690540-mRNA-1:cds;Parent=Msa0690540-mRNA-1 |
| chr4_4 | CDS | 58387845 | 58388050 | 58387845 | ID=Msa0690540-mRNA-1:cds;Parent=Msa0690540-mRNA-1 |
| chr4_4 | CDS | 58384781 | 58384920 | 58384781 | ID=Msa0690540-mRNA-1:cds;Parent=Msa0690540-mRNA-1 |
| chr4_4 | CDS | 58384016 | 58384315 | 58384016 | ID=Msa0690540-mRNA-1:cds;Parent=Msa0690540-mRNA-1 |
| chr4_4 | three_prime_UTR | 58383806 | 58384015 | 58383806 | ID=Msa0690540-mRNA-1:three_prime_utr;Parent=Msa0690540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
