Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607520 | XP_003607352.1 | 97.613 | 377 | 7 | 1 | 1 | 375 | 1 | 377 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607520 | sp|P54967|BIOB_ARATH | 78.042 | 378 | 79 | 3 | 1 | 375 | 1 | 377 | 0.0 | 620 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607520 | G7JRL6 | 97.613 | 377 | 7 | 1 | 1 | 375 | 1 | 377 | 0.0 | 767 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0607520 | 0.800142 | 1.655816e-48 | -8.615850e-47 |
| Msa0002680 | Msa0607520 | 0.841399 | 4.865126e-58 | -8.615850e-47 |
| Msa0002710 | Msa0607520 | 0.809817 | 1.568676e-50 | -8.615850e-47 |
| Msa0003700 | Msa0607520 | 0.809013 | 2.333286e-50 | -8.615850e-47 |
| Msa0003720 | Msa0607520 | 0.808157 | 3.554694e-50 | -8.615850e-47 |
| Msa0012940 | Msa0607520 | 0.843642 | 1.235748e-58 | -8.615850e-47 |
| Msa0024400 | Msa0607520 | 0.816443 | 5.515851e-52 | -8.615850e-47 |
| Msa0024710 | Msa0607520 | 0.804205 | 2.415777e-49 | -8.615850e-47 |
| Msa0032920 | Msa0607520 | -0.802718 | 4.910998e-49 | -8.615850e-47 |
| Msa0033880 | Msa0607520 | 0.800114 | 1.677438e-48 | -8.615850e-47 |
| Msa0041690 | Msa0607520 | 0.819383 | 1.195705e-52 | -8.615850e-47 |
| Msa0051020 | Msa0607520 | 0.820987 | 5.129268e-53 | -8.615850e-47 |
| Msa0061340 | Msa0607520 | 0.807323 | 5.345904e-50 | -8.615850e-47 |
| Msa0069600 | Msa0607520 | 0.810964 | 8.869233e-51 | -8.615850e-47 |
| Msa0075170 | Msa0607520 | 0.800754 | 1.242684e-48 | -8.615850e-47 |
| Msa0081520 | Msa0607520 | 0.816545 | 5.233809e-52 | -8.615850e-47 |
| Msa0089980 | Msa0607520 | 0.804118 | 2.518499e-49 | -8.615850e-47 |
| Msa0090010 | Msa0607520 | 0.803856 | 2.854986e-49 | -8.615850e-47 |
| Msa0093010 | Msa0607520 | 0.816284 | 5.985746e-52 | -8.615850e-47 |
| Msa0093850 | Msa0607520 | 0.864282 | 1.360072e-64 | -8.615850e-47 |
| Msa0101270 | Msa0607520 | 0.827894 | 1.215714e-54 | -8.615850e-47 |
| Msa0106320 | Msa0607520 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0106620 | Msa0607520 | 0.829027 | 6.474544e-55 | -8.615850e-47 |
| Msa0106710 | Msa0607520 | 0.824908 | 6.255589e-54 | -8.615850e-47 |
| Msa0116790 | Msa0607520 | 0.822784 | 1.967808e-53 | -8.615850e-47 |
| Msa0119900 | Msa0607520 | 0.808524 | 2.969640e-50 | -8.615850e-47 |
| Msa0607520 | Msa0610250 | 0.811663 | 6.254369e-51 | -8.615850e-47 |
| Msa0607520 | Msa0614000 | 0.817191 | 3.748817e-52 | -8.615850e-47 |
| Msa0607520 | Msa0614510 | 0.833631 | 4.773728e-56 | -8.615850e-47 |
| Msa0607520 | Msa0618950 | 0.803060 | 4.174277e-49 | -8.615850e-47 |
| Msa0607520 | Msa0619420 | 0.822719 | 2.038353e-53 | -8.615850e-47 |
| Msa0607520 | Msa0626450 | 0.824507 | 7.774205e-54 | -8.615850e-47 |
| Msa0607520 | Msa0626490 | 0.827346 | 1.645875e-54 | -8.615850e-47 |
| Msa0607520 | Msa0628420 | 0.850730 | 1.405278e-60 | -8.615850e-47 |
| Msa0607520 | Msa0638480 | 0.841083 | 5.891784e-58 | -8.615850e-47 |
| Msa0607520 | Msa0647430 | 0.812541 | 4.025014e-51 | -8.615850e-47 |
| Msa0607520 | Msa0647820 | 0.960060 | 3.925163e-118 | -8.615850e-47 |
| Msa0607520 | Msa0652690 | 0.813944 | 1.980295e-51 | -8.615850e-47 |
| Msa0607520 | Msa0658040 | 0.816008 | 6.898410e-52 | -8.615850e-47 |
| Msa0607520 | Msa0663270 | 0.805135 | 1.545064e-49 | -8.615850e-47 |
| Msa0607520 | Msa0664600 | 0.823255 | 1.528101e-53 | -8.615850e-47 |
| Msa0607520 | Msa0679100 | 0.804000 | 2.664345e-49 | -8.615850e-47 |
| Msa0607520 | Msa0690310 | 0.870849 | 1.069197e-66 | -8.615850e-47 |
| Msa0607520 | Msa0690540 | 0.952986 | 7.388209e-111 | -8.615850e-47 |
| Msa0607520 | Msa0692880 | 0.808131 | 3.601553e-50 | -8.615850e-47 |
| Msa0607520 | Msa0692980 | 0.831437 | 1.670389e-55 | -8.615850e-47 |
| Msa0607520 | Msa0697720 | 0.803474 | 3.426048e-49 | -8.615850e-47 |
| Msa0607520 | Msa0698100 | 0.808255 | 3.387855e-50 | -8.615850e-47 |
| Msa0607520 | Msa0698910 | 0.824568 | 7.523573e-54 | -8.615850e-47 |
| Msa0607520 | Msa0702720 | 0.802256 | 6.114495e-49 | -8.615850e-47 |
| Msa0607520 | Msa0703440 | 0.822430 | 2.378420e-53 | -8.615850e-47 |
| Msa0607520 | Msa0705390 | 0.809217 | 2.109897e-50 | -8.615850e-47 |
| Msa0607520 | Msa0716410 | 0.810200 | 1.297421e-50 | -8.615850e-47 |
| Msa0607520 | Msa0741440 | 0.816638 | 4.987553e-52 | -8.615850e-47 |
| Msa0607520 | Msa0743530 | 0.812338 | 4.457302e-51 | -8.615850e-47 |
| Msa0607520 | Msa0744100 | 0.811079 | 8.376365e-51 | -8.615850e-47 |
| Msa0607520 | Msa0752700 | 0.810351 | 1.203601e-50 | -8.615850e-47 |
| Msa0607520 | Msa0755330 | 0.851064 | 1.131994e-60 | -8.615850e-47 |
| Msa0607520 | Msa0757800 | 0.805103 | 1.569082e-49 | -8.615850e-47 |
| Msa0607520 | Msa0780930 | 0.822360 | 2.469842e-53 | -8.615850e-47 |
| Msa0607520 | Msa0784480 | 0.808425 | 3.117434e-50 | -8.615850e-47 |
| Msa0607520 | Msa0786750 | 0.838359 | 3.014212e-57 | -8.615850e-47 |
| Msa0607520 | Msa0794970 | 0.812274 | 4.603574e-51 | -8.615850e-47 |
| Msa0607520 | Msa0797930 | 0.819146 | 1.353797e-52 | -8.615850e-47 |
| Msa0607520 | Msa0808800 | 0.818618 | 1.784284e-52 | -8.615850e-47 |
| Msa0607520 | Msa0822170 | 0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0607520 | Msa0822500 | 0.837423 | 5.244050e-57 | -8.615850e-47 |
| Msa0607520 | Msa0825270 | 0.801206 | 1.004434e-48 | -8.615850e-47 |
| Msa0607520 | Msa0831100 | 0.814207 | 1.732398e-51 | -8.615850e-47 |
| Msa0607520 | Msa0833530 | 0.827861 | 1.238021e-54 | -8.615850e-47 |
| Msa0607520 | Msa0843120 | -0.810253 | 1.263790e-50 | -8.615850e-47 |
| Msa0607520 | Msa0865030 | 0.812071 | 5.097168e-51 | -8.615850e-47 |
| Msa0607520 | Msa0879060 | 0.822584 | 2.190669e-53 | -8.615850e-47 |
| Msa0607520 | Msa0880450 | 0.811146 | 8.101885e-51 | -8.615850e-47 |
| Msa0607520 | Msa0884290 | 0.800586 | 1.344529e-48 | -8.615850e-47 |
| Msa0607520 | Msa0903780 | 0.818273 | 2.136037e-52 | -8.615850e-47 |
| Msa0607520 | Msa0937020 | 0.803787 | 2.951352e-49 | -8.615850e-47 |
| Msa0607520 | Msa0939000 | 0.803772 | 2.972553e-49 | -8.615850e-47 |
| Msa0607520 | Msa0943170 | 0.805866 | 1.085400e-49 | -8.615850e-47 |
| Msa0607520 | Msa0945240 | 0.815579 | 8.601811e-52 | -8.615850e-47 |
| Msa0607520 | Msa0958000 | 0.811141 | 8.122287e-51 | -8.615850e-47 |
| Msa0607520 | Msa0997430 | 0.813496 | 2.485719e-51 | -8.615850e-47 |
| Msa0607520 | Msa1009660 | 0.834600 | 2.729875e-56 | -8.615850e-47 |
| Msa0607520 | Msa1028280 | 0.830825 | 2.361450e-55 | -8.615850e-47 |
| Msa0607520 | Msa1034500 | 0.806846 | 6.746217e-50 | -8.615850e-47 |
| Msa0607520 | Msa1037520 | 0.813153 | 2.955975e-51 | -8.615850e-47 |
| Msa0607520 | Msa1042480 | 0.805663 | 1.197243e-49 | -8.615850e-47 |
| Msa0607520 | Msa1047760 | 0.818830 | 1.597469e-52 | -8.615850e-47 |
| Msa0607520 | Msa1050910 | 0.828697 | 7.781749e-55 | -8.615850e-47 |
| Msa0607520 | Msa1050960 | 0.848382 | 6.353579e-60 | -8.615850e-47 |
| Msa0607520 | Msa1068100 | 0.815243 | 1.021669e-51 | -8.615850e-47 |
| Msa0607520 | Msa1070390 | 0.800023 | 1.750171e-48 | -8.615850e-47 |
| Msa0607520 | Msa1070460 | 0.811938 | 5.450326e-51 | -8.615850e-47 |
| Msa0607520 | Msa1075970 | 0.809063 | 2.277461e-50 | -8.615850e-47 |
| Msa0607520 | Msa1076560 | 0.837832 | 4.117747e-57 | -8.615850e-47 |
| Msa0607520 | Msa1079230 | 0.815439 | 9.240813e-52 | -8.615850e-47 |
| Msa0607520 | Msa1089450 | 0.839836 | 1.248412e-57 | -8.615850e-47 |
| Msa0607520 | Msa1096070 | 0.809589 | 1.756047e-50 | -8.615850e-47 |
| Msa0607520 | Msa1101090 | 0.817020 | 4.095071e-52 | -8.615850e-47 |
| Msa0607520 | Msa1105410 | 0.803716 | 3.052699e-49 | -8.615850e-47 |
| Msa0607520 | Msa1114590 | 0.803103 | 4.090017e-49 | -8.615850e-47 |
| Msa0607520 | Msa1123350 | 0.821604 | 3.695923e-53 | -8.615850e-47 |
| Msa0607520 | Msa1127590 | 0.855723 | 5.209997e-62 | -8.615850e-47 |
| Msa0607520 | Msa1131490 | 0.806573 | 7.705208e-50 | -8.615850e-47 |
| Msa0607520 | Msa1145810 | 0.864331 | 1.312902e-64 | -8.615850e-47 |
| Msa0607520 | Msa1168950 | 0.803263 | 3.789947e-49 | -8.615850e-47 |
| Msa0607520 | Msa1169040 | 0.809005 | 2.342655e-50 | -8.615850e-47 |
| Msa0607520 | Msa1178580 | 0.821661 | 3.586102e-53 | -8.615850e-47 |
| Msa0607520 | Msa1205590 | 0.806376 | 8.476664e-50 | -8.615850e-47 |
| Msa0607520 | Msa1206650 | 0.826593 | 2.491594e-54 | -8.615850e-47 |
| Msa0607520 | Msa1211340 | 0.812925 | 3.316565e-51 | -8.615850e-47 |
| Msa0607520 | Msa1219000 | 0.856777 | 2.557033e-62 | -8.615850e-47 |
| Msa0607520 | Msa1227460 | 0.827740 | 1.323709e-54 | -8.615850e-47 |
| Msa0607520 | Msa1233850 | 0.819451 | 1.153770e-52 | -8.615850e-47 |
| Msa0607520 | Msa1254560 | 0.807535 | 4.821064e-50 | -8.615850e-47 |
| Msa0607520 | Msa1259640 | 0.815894 | 7.316909e-52 | -8.615850e-47 |
| Msa0607520 | Msa1262890 | 0.820726 | 5.888988e-53 | -8.615850e-47 |
| Msa0607520 | Msa1270420 | 0.832278 | 1.035520e-55 | -8.615850e-47 |
| Msa0607520 | Msa1276150 | 0.818713 | 1.698357e-52 | -8.615850e-47 |
| Msa0607520 | Msa1276660 | 0.809898 | 1.507268e-50 | -8.615850e-47 |
| Msa0607520 | Msa1297530 | 0.810064 | 1.388017e-50 | -8.615850e-47 |
| Msa0607520 | Msa1298370 | 0.800408 | 1.461303e-48 | -8.615850e-47 |
| Msa0607520 | Msa1323690 | 0.820128 | 8.077663e-53 | -8.615850e-47 |
| Msa0607520 | Msa1329790 | 0.810386 | 1.182693e-50 | -8.615850e-47 |
| Msa0607520 | Msa1332760 | 0.845034 | 5.223483e-59 | -8.615850e-47 |
| Msa0607520 | Msa1342630 | 0.814263 | 1.684036e-51 | -8.615850e-47 |
| Msa0607520 | Msa1344310 | 0.814947 | 1.188562e-51 | -8.615850e-47 |
| Msa0607520 | Msa1345100 | 0.842467 | 2.540247e-58 | -8.615850e-47 |
| Msa0607520 | Msa1356830 | 0.807627 | 4.608692e-50 | -8.615850e-47 |
| Msa0607520 | Msa1360980 | 0.828735 | 7.619749e-55 | -8.615850e-47 |
| Msa0607520 | Msa1365610 | 0.803942 | 2.740363e-49 | -8.615850e-47 |
| Msa0607520 | Msa1369150 | 0.824403 | 8.227205e-54 | -8.615850e-47 |
| Msa0607520 | Msa1370590 | 0.816394 | 5.657259e-52 | -8.615850e-47 |
| Msa0607520 | Msa1371520 | 0.847887 | 8.703220e-60 | -8.615850e-47 |
| Msa0607520 | Msa1373820 | 0.829395 | 5.272227e-55 | -8.615850e-47 |
| Msa0607520 | Msa1374060 | 0.817540 | 3.127299e-52 | -8.615850e-47 |
| Msa0607520 | Msa1384100 | 0.812930 | 3.308146e-51 | -8.615850e-47 |
| Msa0607520 | Msa1386710 | 0.821681 | 3.548367e-53 | -8.615850e-47 |
| Msa0607520 | Msa1393820 | 0.810071 | 1.382824e-50 | -8.615850e-47 |
| Msa0607520 | Msa1407190 | 0.807164 | 5.779047e-50 | -8.615850e-47 |
| Msa0607520 | Msa1408050 | 0.805085 | 1.582467e-49 | -8.615850e-47 |
| Msa0607520 | Msa1411950 | 0.850419 | 1.718657e-60 | -8.615850e-47 |
| Msa0607520 | Msa1414820 | 0.804181 | 2.443643e-49 | -8.615850e-47 |
| Msa0607520 | Msa1418240 | 0.847743 | 9.533034e-60 | -8.615850e-47 |
| Msa0607520 | Msa1419690 | 0.804073 | 2.573795e-49 | -8.615850e-47 |
| Msa0607520 | Msa1432130 | 0.817445 | 3.284795e-52 | -8.615850e-47 |
| Msa0607520 | Msa1434740 | 0.858914 | 5.937695e-63 | -8.615850e-47 |
| Msa0607520 | Msa1439610 | 0.816491 | 5.380716e-52 | -8.615850e-47 |
| Msa0607520 | Msa1440960 | 0.808092 | 3.671167e-50 | -8.615850e-47 |
| Msa0607520 | Msa1444120 | 0.815767 | 7.810813e-52 | -8.615850e-47 |
| Msa0607520 | Msa1461540 | 0.806766 | 7.013063e-50 | -8.615850e-47 |
| Msa0123510 | Msa0607520 | 0.805284 | 1.437728e-49 | -8.615850e-47 |
| Msa0127850 | Msa0607520 | 0.805738 | 1.154994e-49 | -8.615850e-47 |
| Msa0131590 | Msa0607520 | 0.809219 | 2.108586e-50 | -8.615850e-47 |
| Msa0136120 | Msa0607520 | 0.805438 | 1.334988e-49 | -8.615850e-47 |
| Msa0138360 | Msa0607520 | 0.861759 | 8.182879e-64 | -8.615850e-47 |
| Msa0138750 | Msa0607520 | 0.807768 | 4.301887e-50 | -8.615850e-47 |
| Msa0141400 | Msa0607520 | 0.835570 | 1.553547e-56 | -8.615850e-47 |
| Msa0144360 | Msa0607520 | 0.821292 | 4.363519e-53 | -8.615850e-47 |
| Msa0145580 | Msa0607520 | 0.822750 | 2.003929e-53 | -8.615850e-47 |
| Msa0146280 | Msa0607520 | 0.815027 | 1.140679e-51 | -8.615850e-47 |
| Msa0147980 | Msa0607520 | 0.863836 | 1.872556e-64 | -8.615850e-47 |
| Msa0150260 | Msa0607520 | 0.806398 | 8.389021e-50 | -8.615850e-47 |
| Msa0152400 | Msa0607520 | 0.810928 | 9.032240e-51 | -8.615850e-47 |
| Msa0163510 | Msa0607520 | 0.812122 | 4.969860e-51 | -8.615850e-47 |
| Msa0166460 | Msa0607520 | 0.836357 | 9.809491e-57 | -8.615850e-47 |
| Msa0168870 | Msa0607520 | 0.810876 | 9.267762e-51 | -8.615850e-47 |
| Msa0173890 | Msa0607520 | 0.816644 | 4.971718e-52 | -8.615850e-47 |
| Msa0202490 | Msa0607520 | 0.800623 | 1.321401e-48 | -8.615850e-47 |
| Msa0204960 | Msa0607520 | 0.814497 | 1.494936e-51 | -8.615850e-47 |
| Msa0206690 | Msa0607520 | 0.801350 | 9.387087e-49 | -8.615850e-47 |
| Msa0207040 | Msa0607520 | -0.819066 | 1.411348e-52 | -8.615850e-47 |
| Msa0211150 | Msa0607520 | 0.812786 | 3.558710e-51 | -8.615850e-47 |
| Msa0214550 | Msa0607520 | 0.821782 | 3.362017e-53 | -8.615850e-47 |
| Msa0225480 | Msa0607520 | 0.801207 | 1.003838e-48 | -8.615850e-47 |
| Msa0230150 | Msa0607520 | 0.813043 | 3.125517e-51 | -8.615850e-47 |
| Msa0237420 | Msa0607520 | 0.805352 | 1.391324e-49 | -8.615850e-47 |
| Msa0378970 | Msa0607520 | 0.817843 | 2.671537e-52 | -8.615850e-47 |
| Msa0384670 | Msa0607520 | 0.826554 | 2.545592e-54 | -8.615850e-47 |
| Msa0423750 | Msa0607520 | 0.821202 | 4.575689e-53 | -8.615850e-47 |
| Msa0428580 | Msa0607520 | 0.809124 | 2.209188e-50 | -8.615850e-47 |
| Msa0432160 | Msa0607520 | 0.813607 | 2.350031e-51 | -8.615850e-47 |
| Msa0434570 | Msa0607520 | 0.834121 | 3.600008e-56 | -8.615850e-47 |
| Msa0434770 | Msa0607520 | 0.832014 | 1.203829e-55 | -8.615850e-47 |
| Msa0450400 | Msa0607520 | -0.821325 | 4.288280e-53 | -8.615850e-47 |
| Msa0468250 | Msa0607520 | 0.836834 | 7.419351e-57 | -8.615850e-47 |
| Msa0468270 | Msa0607520 | 0.836648 | 8.271360e-57 | -8.615850e-47 |
| Msa0474940 | Msa0607520 | 0.803143 | 4.012250e-49 | -8.615850e-47 |
| Msa0476680 | Msa0607520 | 0.812865 | 3.419271e-51 | -8.615850e-47 |
| Msa0478580 | Msa0607520 | 0.803216 | 3.875697e-49 | -8.615850e-47 |
| Msa0479200 | Msa0607520 | 0.802389 | 5.742879e-49 | -8.615850e-47 |
| Msa0480780 | Msa0607520 | 0.812765 | 3.595191e-51 | -8.615850e-47 |
| Msa0240900 | Msa0607520 | 0.832800 | 7.689174e-56 | -8.615850e-47 |
| Msa0241830 | Msa0607520 | 0.820922 | 5.310614e-53 | -8.615850e-47 |
| Msa0244980 | Msa0607520 | 0.816286 | 5.981865e-52 | -8.615850e-47 |
| Msa0245580 | Msa0607520 | 0.817254 | 3.627436e-52 | -8.615850e-47 |
| Msa0249580 | Msa0607520 | 0.818859 | 1.572715e-52 | -8.615850e-47 |
| Msa0257490 | Msa0607520 | 0.814338 | 1.620731e-51 | -8.615850e-47 |
| Msa0269470 | Msa0607520 | 0.814749 | 1.314793e-51 | -8.615850e-47 |
| Msa0274980 | Msa0607520 | 0.822879 | 1.870613e-53 | -8.615850e-47 |
| Msa0277450 | Msa0607520 | 0.821142 | 4.725730e-53 | -8.615850e-47 |
| Msa0279850 | Msa0607520 | 0.831210 | 1.899229e-55 | -8.615850e-47 |
| Msa0283420 | Msa0607520 | 0.818035 | 2.418318e-52 | -8.615850e-47 |
| Msa0296250 | Msa0607520 | 0.802274 | 6.063606e-49 | -8.615850e-47 |
| Msa0296790 | Msa0607520 | 0.807418 | 5.104969e-50 | -8.615850e-47 |
| Msa0300320 | Msa0607520 | 0.807558 | 4.767775e-50 | -8.615850e-47 |
| Msa0307850 | Msa0607520 | 0.805233 | 1.473979e-49 | -8.615850e-47 |
| Msa0315690 | Msa0607520 | 0.810729 | 9.973742e-51 | -8.615850e-47 |
| Msa0317970 | Msa0607520 | 0.840069 | 1.085493e-57 | -8.615850e-47 |
| Msa0321690 | Msa0607520 | 0.800772 | 1.232296e-48 | -8.615850e-47 |
| Msa0322240 | Msa0607520 | 0.815901 | 7.288559e-52 | -8.615850e-47 |
| Msa0322900 | Msa0607520 | 0.857705 | 1.360273e-62 | -8.615850e-47 |
| Msa0326590 | Msa0607520 | 0.819591 | 1.071480e-52 | -8.615850e-47 |
| Msa0341690 | Msa0607520 | 0.870364 | 1.542986e-66 | -8.615850e-47 |
| Msa0342010 | Msa0607520 | 0.810692 | 1.015679e-50 | -8.615850e-47 |
| Msa0358400 | Msa0607520 | 0.840329 | 9.287266e-58 | -8.615850e-47 |
| Msa0482940 | Msa0607520 | 0.808248 | 3.400442e-50 | -8.615850e-47 |
| Msa0485240 | Msa0607520 | 0.841475 | 4.647235e-58 | -8.615850e-47 |
| Msa0491000 | Msa0607520 | 0.804989 | 1.657127e-49 | -8.615850e-47 |
| Msa0518030 | Msa0607520 | 0.835948 | 1.246267e-56 | -8.615850e-47 |
| Msa0521010 | Msa0607520 | 0.811599 | 6.458775e-51 | -8.615850e-47 |
| Msa0527020 | Msa0607520 | 0.815696 | 8.098711e-52 | -8.615850e-47 |
| Msa0527190 | Msa0607520 | 0.867015 | 1.867874e-65 | -8.615850e-47 |
| Msa0531250 | Msa0607520 | 0.843825 | 1.104237e-58 | -8.615850e-47 |
| Msa0532980 | Msa0607520 | 0.815026 | 1.141345e-51 | -8.615850e-47 |
| Msa0547990 | Msa0607520 | 0.802993 | 4.309055e-49 | -8.615850e-47 |
| Msa0556010 | Msa0607520 | 0.823253 | 1.530172e-53 | -8.615850e-47 |
| Msa0559870 | Msa0607520 | 0.806199 | 9.238959e-50 | -8.615850e-47 |
| Msa0560500 | Msa0607520 | 0.800443 | 1.437948e-48 | -8.615850e-47 |
| Msa0574390 | Msa0607520 | 0.822337 | 2.499959e-53 | -8.615850e-47 |
| Msa0576680 | Msa0607520 | 0.809139 | 2.192778e-50 | -8.615850e-47 |
| Msa0582480 | Msa0607520 | 0.824601 | 7.387660e-54 | -8.615850e-47 |
| Msa0584550 | Msa0607520 | 0.806119 | 9.603739e-50 | -8.615850e-47 |
| Msa0586220 | Msa0607520 | 0.810125 | 1.346473e-50 | -8.615850e-47 |
| Msa0588090 | Msa0607520 | 0.838373 | 2.989523e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607520 | MtrunA17_Chr4g0039201 | 97.613 | 377 | 7 | 1 | 1 | 375 | 1 | 377 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0607520 | AT2G43360.1 | 78.042 | 378 | 79 | 3 | 1 | 375 | 1 | 377 | 0.0 | 620 |
Find 102 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTGGTCCAATCGTTTC+TGG | -0.015035 | 4_2:-54333791 | None:intergenic |
| CACAATCAAGATCTTCAATT+TGG | 0.113084 | 4_2:+54333692 | Msa0607520:CDS |
| CTACTCTCTTCTTCCTTTAT+AGG | 0.159208 | 4_2:+54339320 | Msa0607520:three_prime_UTR |
| CTAGGTGTCTGGTGAATTTC+AGG | 0.182373 | 4_2:-54339477 | None:intergenic |
| CAACTCATGTTTAAAGTTCT+TGG | 0.195744 | 4_2:+54339177 | Msa0607520:CDS |
| TACAGCAATAAGTGCATTAA+TGG | 0.211624 | 4_2:-54338467 | None:intergenic |
| ATTCTTGATCTTCTCTTTCA+TGG | 0.214373 | 4_2:+54333841 | Msa0607520:CDS |
| ATAGACATGCTCATAACTTT+AGG | 0.220660 | 4_2:+54334075 | Msa0607520:CDS |
| TCATCCAAGCTTGGAGCTTT+TGG | 0.226583 | 4_2:-54339207 | None:intergenic |
| ACAATGTATCTGAAGTTATC+AGG | 0.236404 | 4_2:-54339347 | None:intergenic |
| TCTTGATTGTGAACGCAAAA+TGG | 0.254182 | 4_2:-54333680 | None:intergenic |
| GATGGATTTGACTTCCTCTT+TGG | 0.298498 | 4_2:-54333806 | None:intergenic |
| CTTCAGATACATTGTATGTT+AGG | 0.304944 | 4_2:+54339355 | Msa0607520:three_prime_UTR |
| TAGACATGCTCATAACTTTA+GGG | 0.315642 | 4_2:+54334076 | Msa0607520:CDS |
| CTGTTTACAGGTGGAATTAT+CGG | 0.325033 | 4_2:+54338367 | Msa0607520:intron |
| GAACAAGGATGCTGTTCTTC+AGG | 0.331156 | 4_2:+54334211 | Msa0607520:CDS |
| ATGGAGGTGTGTTGCACCCT+TGG | 0.332305 | 4_2:+54335399 | Msa0607520:CDS |
| GCATTAATGGGAACACTCTC+TGG | 0.337355 | 4_2:-54338454 | None:intergenic |
| TCTTTGGTCCAATCGTTTCT+GGG | 0.338511 | 4_2:-54333790 | None:intergenic |
| ACTCTTCTATCTGTGAAAAC+TGG | 0.339092 | 4_2:+54334113 | Msa0607520:CDS |
| ACAATCAAGATCTTCAATTT+GGG | 0.353418 | 4_2:+54333693 | Msa0607520:CDS |
| CTCGAGTTTGTTCGTGATGC+AGG | 0.355837 | 4_2:+54335555 | Msa0607520:CDS |
| GTCCTTGTTGTGATGATGTT+TGG | 0.358078 | 4_2:-54335510 | None:intergenic |
| GATAACCTGACCATTGCTTT+TGG | 0.373125 | 4_2:-54339036 | None:intergenic |
| TTCTTGATCTTCTCTTTCAT+GGG | 0.374526 | 4_2:+54333842 | Msa0607520:CDS |
| AGCTGCTTCTTCTAGTTAGT+TGG | 0.381526 | 4_2:+54339263 | Msa0607520:exon |
| TTTCCAGCCTGTTGAAATAT+GGG | 0.382462 | 4_2:+54338975 | Msa0607520:intron |
| TAATGCACTTATTGCTGTAA+AGG | 0.384583 | 4_2:+54338471 | Msa0607520:CDS |
| GTTATCAGGGGAGCCTATAA+AGG | 0.390453 | 4_2:-54339333 | None:intergenic |
| ATCACAATCTTGACACTTCA+AGG | 0.393394 | 4_2:+54335478 | Msa0607520:CDS |
| GGTGCCAATTCTATCTTTGC+TGG | 0.395612 | 4_2:+54339111 | Msa0607520:CDS |
| AGATATGATACAGGACTTAA+AGG | 0.396045 | 4_2:+54334176 | Msa0607520:CDS |
| TGTAAAGGGAACCCCTCTTC+AGG | 0.396586 | 4_2:+54338486 | Msa0607520:CDS |
| AATGCACTTATTGCTGTAAA+GGG | 0.397169 | 4_2:+54338472 | Msa0607520:CDS |
| GGTTATCTGCCGGCAGAGTT+CGG | 0.405446 | 4_2:+54339052 | Msa0607520:CDS |
| ACTACATATGTTAACAGAAA+TGG | 0.406189 | 4_2:-54339290 | None:intergenic |
| ACAGGTGGAATTATCGGGCT+TGG | 0.409015 | 4_2:+54338373 | Msa0607520:intron |
| CAGGCATTGTGCTTTCTAGC+TGG | 0.411208 | 4_2:+54339090 | Msa0607520:CDS |
| TTCACCAGCAAAGATAGAAT+TGG | 0.413825 | 4_2:-54339115 | None:intergenic |
| CTCTTCTATCTGTGAAAACT+GGG | 0.419588 | 4_2:+54334114 | Msa0607520:CDS |
| ACAGCAATAAGTGCATTAAT+GGG | 0.424019 | 4_2:-54338466 | None:intergenic |
| ATCATCTCCCATATTTCAAC+AGG | 0.427600 | 4_2:-54338982 | None:intergenic |
| TTGTTCTAGGCTAAAGAGGC+TGG | 0.434392 | 4_2:+54335061 | Msa0607520:intron |
| AGAAAGCACAATGCCTGCTC+AGG | 0.444179 | 4_2:-54339084 | None:intergenic |
| TCGGTTCTCCGTGCCTGAGC+AGG | 0.450301 | 4_2:+54339071 | Msa0607520:CDS |
| CTTGATTGTGAACGCAAAAT+GGG | 0.454351 | 4_2:-54333679 | None:intergenic |
| AAGAATGGGAGAATCATAGA+TGG | 0.458283 | 4_2:-54333824 | None:intergenic |
| TGTTTACAGGTGGAATTATC+GGG | 0.461360 | 4_2:+54338368 | Msa0607520:intron |
| ATGAAAGAGAAGATCAAGAA+TGG | 0.467131 | 4_2:-54333839 | None:intergenic |
| AGGAAGAAGAGAGTAGTTGA+AGG | 0.479983 | 4_2:-54339313 | None:intergenic |
| TTCAAGTATCTGCTTGAAGT+TGG | 0.487141 | 4_2:-54335137 | None:intergenic |
| GTTTCATCATCATCCAAGCT+TGG | 0.487186 | 4_2:-54339216 | None:intergenic |
| TTGCATGGGCGCTGCATGGA+GGG | 0.488788 | 4_2:+54335096 | Msa0607520:CDS |
| GCTTCCAAAAGCTCCAAGCT+TGG | 0.493652 | 4_2:+54339203 | Msa0607520:CDS |
| GTGTTGCACCCTTGGCATGC+TGG | 0.496041 | 4_2:+54335407 | Msa0607520:CDS |
| TATCATATCTAGAGGATTGA+GGG | 0.496475 | 4_2:-54334163 | None:intergenic |
| TGGCATGCTGGATAAAGATC+AGG | 0.498708 | 4_2:+54335419 | Msa0607520:CDS |
| CAATGCCAAAAGCAATGGTC+AGG | 0.500807 | 4_2:+54339031 | Msa0607520:CDS |
| TGAAAGAGAAGATCAAGAAT+GGG | 0.501465 | 4_2:-54333838 | None:intergenic |
| CACGGAGAACCGAACTCTGC+CGG | 0.506574 | 4_2:-54339061 | None:intergenic |
| AAAGTAATTATAATGCTGTA+AGG | 0.507216 | 4_2:-54333716 | None:intergenic |
| TTTGCATGGGCGCTGCATGG+AGG | 0.508596 | 4_2:+54335095 | Msa0607520:CDS |
| TCGAGTTTGTTCGTGATGCA+GGG | 0.521893 | 4_2:+54335556 | Msa0607520:CDS |
| CAATCCTCTAGATATGATAC+AGG | 0.523313 | 4_2:+54334167 | Msa0607520:CDS |
| GCTGGTGAGCTCAAGAAGGC+AGG | 0.530926 | 4_2:+54335441 | Msa0607520:CDS |
| CAATGTATCTGAAGTTATCA+GGG | 0.533618 | 4_2:-54339346 | None:intergenic |
| ATCAAAATCATTGTTAGCAG+TGG | 0.540009 | 4_2:-54339148 | None:intergenic |
| GTATCATATCTAGAGGATTG+AGG | 0.540265 | 4_2:-54334164 | None:intergenic |
| CTTTGGTCCAATCGTTTCTG+GGG | 0.546525 | 4_2:-54333789 | None:intergenic |
| TCACCTTCTGATCCTGAAGA+GGG | 0.552064 | 4_2:-54338498 | None:intergenic |
| TCTTGATCTTCTCTTTCATG+GGG | 0.553899 | 4_2:+54333843 | Msa0607520:CDS |
| ATCTTTATCCAGCATGCCAA+GGG | 0.555001 | 4_2:-54335415 | None:intergenic |
| TGTTCTAGGCTAAAGAGGCT+GGG | 0.557041 | 4_2:+54335062 | Msa0607520:intron |
| GATCTTTATCCAGCATGCCA+AGG | 0.567801 | 4_2:-54335416 | None:intergenic |
| GGAACACTCTCTGGATGTGT+AGG | 0.573548 | 4_2:-54338445 | None:intergenic |
| AACCCCTCTTCAGGATCAGA+AGG | 0.584376 | 4_2:+54338495 | Msa0607520:CDS |
| TCAGGCTGGTGAGCTCAAGA+AGG | 0.586637 | 4_2:+54335437 | Msa0607520:CDS |
| CTTCTATCTGTGAAAACTGG+GGG | 0.591187 | 4_2:+54334116 | Msa0607520:CDS |
| TGTTCTTCAGGCCGCAGTCA+AGG | 0.593054 | 4_2:+54334223 | Msa0607520:CDS |
| CTCACCTTCTGATCCTGAAG+AGG | 0.598031 | 4_2:-54338499 | None:intergenic |
| GCACAATGCCTGCTCAGGCA+CGG | 0.607283 | 4_2:-54339079 | None:intergenic |
| GCAATGGTCAGGTTATCTGC+CGG | 0.608756 | 4_2:+54339042 | Msa0607520:CDS |
| TCACAATCTTGACACTTCAA+GGG | 0.616066 | 4_2:+54335479 | Msa0607520:CDS |
| TATCACAATGCCAAAAGCAA+TGG | 0.617688 | 4_2:+54339026 | Msa0607520:CDS |
| AAAATGGCCCCAGAAACGAT+TGG | 0.622289 | 4_2:+54333782 | Msa0607520:CDS |
| AAGTCCTGTATCATATCTAG+AGG | 0.624831 | 4_2:-54334171 | None:intergenic |
| CAGAAACGATTGGACCAAAG+AGG | 0.631306 | 4_2:+54333792 | Msa0607520:CDS |
| GATGATCCGCATGATTGCAA+CGG | 0.641283 | 4_2:+54338999 | Msa0607520:CDS |
| TATCGGGCTTGGAGAAGCAG+AGG | 0.642505 | 4_2:+54338384 | Msa0607520:CDS |
| GCAGGGATTAATGTTTGTAG+TGG | 0.646587 | 4_2:+54335573 | Msa0607520:CDS |
| GCTGCATGGAGGGATACGAT+AGG | 0.661097 | 4_2:+54335106 | Msa0607520:CDS |
| GAAGCAGAGGAAGACCGTGT+AGG | 0.666808 | 4_2:+54338397 | Msa0607520:CDS |
| CACCTTCTGATCCTGAAGAG+GGG | 0.671172 | 4_2:-54338497 | None:intergenic |
| TACGTGCCGTTGCAATCATG+CGG | 0.678363 | 4_2:-54339005 | None:intergenic |
| TCTTCTATCTGTGAAAACTG+GGG | 0.679013 | 4_2:+54334115 | Msa0607520:CDS |
| GGATGATGATGAAACTAATG+AGG | 0.695089 | 4_2:+54339224 | Msa0607520:CDS |
| ATCCAAACATCATCACAACA+AGG | 0.696715 | 4_2:+54335508 | Msa0607520:CDS |
| TTCTATCTGTGAAAACTGGG+GGG | 0.697571 | 4_2:+54334117 | Msa0607520:CDS |
| ATGTATGTAACAAACCTACA+CGG | 0.697572 | 4_2:-54338411 | None:intergenic |
| AATGTATCTGAAGTTATCAG+GGG | 0.697966 | 4_2:-54339345 | None:intergenic |
| ATGCTGGATAAAGATCAGGC+TGG | 0.711212 | 4_2:+54335423 | Msa0607520:CDS |
| ATAAAAGACTACCTTGACTG+CGG | 0.713325 | 4_2:-54334234 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTTTGATTTTTTTTAAT+TGG | + | chr4_2:54333923-54333942 | Msa0607520:intron | 10.0% |
| !!! | ACTAAAATTAATTTTTTTGT+GGG | - | chr4_2:54337293-54337312 | None:intergenic | 10.0% |
| !!! | ACAAAAAAATTAATTTTAGT+GGG | + | chr4_2:54337293-54337312 | Msa0607520:intron | 10.0% |
| !!! | AAACAAATTTATTTTAAGAA+GGG | + | chr4_2:54337324-54337343 | Msa0607520:intron | 10.0% |
| !! | ATTATATTATAATAAACATC+AGG | - | chr4_2:54337823-54337842 | None:intergenic | 10.0% |
| !! | TTTAACTAAAAAAACAAAAG+GGG | - | chr4_2:54333905-54333924 | None:intergenic | 15.0% |
| !! | CTTTAACTAAAAAAACAAAA+GGG | - | chr4_2:54333906-54333925 | None:intergenic | 15.0% |
| !! | ACTTTAACTAAAAAAACAAA+AGG | - | chr4_2:54333907-54333926 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTTGTGATTTTTT+AGG | + | chr4_2:54334043-54334062 | Msa0607520:intron | 15.0% |
| !! | ACAATTGTTAAAATGATAAA+GGG | - | chr4_2:54334611-54334630 | None:intergenic | 15.0% |
| !! | AACAATTGTTAAAATGATAA+AGG | - | chr4_2:54334612-54334631 | None:intergenic | 15.0% |
| !! | TACTTGAATAAAGAATAAAA+TGG | - | chr4_2:54335794-54335813 | None:intergenic | 15.0% |
| !! | AAAAAAAGTTAAAGACTTTA+GGG | - | chr4_2:54336652-54336671 | None:intergenic | 15.0% |
| !! | TAAAAAAAGTTAAAGACTTT+AGG | - | chr4_2:54336653-54336672 | None:intergenic | 15.0% |
| !! | AAAAAAAACTGAAAAAAGAT+GGG | - | chr4_2:54336937-54336956 | None:intergenic | 15.0% |
| !! | AAAAAAAAACTGAAAAAAGA+TGG | - | chr4_2:54336938-54336957 | None:intergenic | 15.0% |
| !! | AAGATAAAGTTTATAGTTAA+TGG | + | chr4_2:54337244-54337263 | Msa0607520:intron | 15.0% |
| !! | AGATAAAGTTTATAGTTAAT+GGG | + | chr4_2:54337245-54337264 | Msa0607520:intron | 15.0% |
| !!! | CACTAAAATTAATTTTTTTG+TGG | - | chr4_2:54337294-54337313 | None:intergenic | 15.0% |
| !!! | CACAAAAAAATTAATTTTAG+TGG | + | chr4_2:54337292-54337311 | Msa0607520:intron | 15.0% |
| !!! | CTTCTTAAAATAAATTTGTT+TGG | - | chr4_2:54337325-54337344 | None:intergenic | 15.0% |
| !!! | CAAACAAATTTATTTTAAGA+AGG | + | chr4_2:54337323-54337342 | Msa0607520:intron | 15.0% |
| !!! | AACAAATTTATTTTAAGAAG+GGG | + | chr4_2:54337325-54337344 | Msa0607520:intron | 15.0% |
| !!! | TTATAATTTTCATACATTCA+AGG | + | chr4_2:54337616-54337635 | Msa0607520:intron | 15.0% |
| !!! | ATATTTTGTAGTTAATTAAC+TGG | - | chr4_2:54337943-54337962 | None:intergenic | 15.0% |
| !!! | ATTTTGATATTATATATAGC+TGG | - | chr4_2:54338092-54338111 | None:intergenic | 15.0% |
| !! | TAAAAACAGTTAAAAAAACT+GGG | - | chr4_2:54338256-54338275 | None:intergenic | 15.0% |
| !! | ACAAGCATAAAAAAAATTAT+GGG | - | chr4_2:54338709-54338728 | None:intergenic | 15.0% |
| !! | AACAAGCATAAAAAAAATTA+TGG | - | chr4_2:54338710-54338729 | None:intergenic | 15.0% |
| !! | TTCAGAATGAATTCAAAAAT+GGG | - | chr4_2:54333609-54333628 | None:intergenic | 20.0% |
| !! | AAAGTAATTATAATGCTGTA+AGG | - | chr4_2:54333719-54333738 | None:intergenic | 20.0% |
| !!! | TTTGTTGGAAAATTTTGAAA+TGG | + | chr4_2:54333978-54333997 | Msa0607520:intron | 20.0% |
| !!! | ATTATTGTTACCTGATTTTT+GGG | - | chr4_2:54334403-54334422 | None:intergenic | 20.0% |
| !! | CAATAATGAAAAAGATAGTA+AGG | + | chr4_2:54334416-54334435 | Msa0607520:intron | 20.0% |
| !! | ATTGTTACAATATCTTCATT+TGG | + | chr4_2:54334748-54334767 | Msa0607520:intron | 20.0% |
| !!! | TTTGGAATTATAACCATTTA+TGG | + | chr4_2:54334826-54334845 | Msa0607520:intron | 20.0% |
| !! | TTGGAATTATAACCATTTAT+GGG | + | chr4_2:54334827-54334846 | Msa0607520:intron | 20.0% |
| !!! | ATGATTAATTTTCCCATAAA+TGG | - | chr4_2:54334842-54334861 | None:intergenic | 20.0% |
| !! | TGATAGAAAAATCAAACAAT+TGG | - | chr4_2:54334921-54334940 | None:intergenic | 20.0% |
| !! | ATATTATTCAAGAACAATCA+TGG | - | chr4_2:54335030-54335049 | None:intergenic | 20.0% |
| !! | ATGATTGTTCTTGAATAATA+TGG | + | chr4_2:54335029-54335048 | Msa0607520:intron | 20.0% |
| !!! | TTCATAGTAGTTGATAATTA+AGG | - | chr4_2:54335205-54335224 | None:intergenic | 20.0% |
| !!! | CTACTATGAAATAAGTTTTA+TGG | + | chr4_2:54335215-54335234 | Msa0607520:intron | 20.0% |
| !! | TATTTGACAAACCTAATAAT+TGG | + | chr4_2:54335254-54335273 | Msa0607520:intron | 20.0% |
| !! | TAATTATAACTATCTGTATC+TGG | - | chr4_2:54335850-54335869 | None:intergenic | 20.0% |
| !! | AGATACAGATAGTTATAATT+AGG | + | chr4_2:54335849-54335868 | Msa0607520:intron | 20.0% |
| !! | TACTTGAATAAAGAATAGAA+TGG | - | chr4_2:54335914-54335933 | None:intergenic | 20.0% |
| !! | TTGACTACAATATAAGTAAA+AGG | - | chr4_2:54336555-54336574 | None:intergenic | 20.0% |
| !! | AAAAAAGTTAAAGACTTTAG+GGG | - | chr4_2:54336651-54336670 | None:intergenic | 20.0% |
| !!! | GAGTATTGTATTTATTAAAG+GGG | - | chr4_2:54336731-54336750 | None:intergenic | 20.0% |
| !!! | CGAGTATTGTATTTATTAAA+GGG | - | chr4_2:54336732-54336751 | None:intergenic | 20.0% |
| !!! | TCGAGTATTGTATTTATTAA+AGG | - | chr4_2:54336733-54336752 | None:intergenic | 20.0% |
| !! | TAAAAAGAACAACAGAAAAT+TGG | + | chr4_2:54336850-54336869 | Msa0607520:intron | 20.0% |
| !! | AAAAAAACTGAAAAAAGATG+GGG | - | chr4_2:54336936-54336955 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGAAAAGCTGTT+CGG | + | chr4_2:54336955-54336974 | Msa0607520:intron | 20.0% |
| !!! | ACAAATTTATTTTAAGAAGG+GGG | + | chr4_2:54337326-54337345 | Msa0607520:intron | 20.0% |
| !!! | TAATGAGTAAATAGTCATTT+TGG | - | chr4_2:54337675-54337694 | None:intergenic | 20.0% |
| !! | ATATTATAATAAACATCAGG+AGG | - | chr4_2:54337820-54337839 | None:intergenic | 20.0% |
| !! | AACTACAAAATATTTCTTCT+TGG | + | chr4_2:54337950-54337969 | Msa0607520:intron | 20.0% |
| !! | GTAAAAACAGTTAAAAAAAC+TGG | - | chr4_2:54338257-54338276 | None:intergenic | 20.0% |
| !! | AATTGAAAGAGAAAAAAAAC+TGG | - | chr4_2:54338319-54338338 | None:intergenic | 20.0% |
| !!! | TAATAGAGCTTAATTTTTAG+TGG | + | chr4_2:54338602-54338621 | Msa0607520:intron | 20.0% |
| !! | CAAACATGAAAAAATATTTC+AGG | - | chr4_2:54338746-54338765 | None:intergenic | 20.0% |
| !!! | ATTTTTAGCCATATTTTGAT+TGG | + | chr4_2:54338833-54338852 | Msa0607520:intron | 20.0% |
| !! | TTTGTGAAAAATGATATGTA+AGG | - | chr4_2:54338896-54338915 | None:intergenic | 20.0% |
| ! | CTTCAGAATGAATTCAAAAA+TGG | - | chr4_2:54333610-54333629 | None:intergenic | 25.0% |
| !! | GAAGAAGAAAAATCATGTTT+TGG | + | chr4_2:54333650-54333669 | Msa0607520:intron | 25.0% |
| ! | ACAATCAAGATCTTCAATTT+GGG | + | chr4_2:54333693-54333712 | Msa0607520:CDS | 25.0% |
| ! | GCTGAAAAAACCATAAAAAA+TGG | + | chr4_2:54333766-54333785 | Msa0607520:CDS | 25.0% |
| ! | TGTTTAAATAGCATGTATCT+TGG | + | chr4_2:54334271-54334290 | Msa0607520:intron | 25.0% |
| ! | ATGATCCAAAATATAGCATT+TGG | + | chr4_2:54334320-54334339 | Msa0607520:intron | 25.0% |
| !! | TTGATCCAAATGCTATATTT+TGG | - | chr4_2:54334328-54334347 | None:intergenic | 25.0% |
| !! | CATTATTGTTACCTGATTTT+TGG | - | chr4_2:54334404-54334423 | None:intergenic | 25.0% |
| ! | TAATGAAAAAGATAGTAAGG+TGG | + | chr4_2:54334419-54334438 | Msa0607520:intron | 25.0% |
| !! | TTGGTATTGAGTAAAATGAT+TGG | + | chr4_2:54334495-54334514 | Msa0607520:intron | 25.0% |
| !!! | TAGCTATTAGTCTTATACTT+AGG | + | chr4_2:54334556-54334575 | Msa0607520:intron | 25.0% |
| ! | TTGTTAAAATGATAAAGGGA+AGG | - | chr4_2:54334607-54334626 | None:intergenic | 25.0% |
| ! | AAGTTGTATTTACTAAACCT+TGG | - | chr4_2:54334693-54334712 | None:intergenic | 25.0% |
| !!! | ATGGAGAATATTTTTGTTCT+AGG | + | chr4_2:54335048-54335067 | Msa0607520:intron | 25.0% |
| ! | TGAGTAAACAAATTATTGAC+AGG | - | chr4_2:54335633-54335652 | None:intergenic | 25.0% |
| ! | TGAGTAAACAAATTATTGAC+AGG | - | chr4_2:54335633-54335652 | None:intergenic | 25.0% |
| !!! | GTCAATAATTTGTTTACTCA+TGG | + | chr4_2:54335633-54335652 | Msa0607520:intron | 25.0% |
| ! | GATGATACAGATAGTTATAA+TGG | + | chr4_2:54335712-54335731 | Msa0607520:intron | 25.0% |
| ! | CAAGAAAAACAAAGACATAA+TGG | - | chr4_2:54336018-54336037 | None:intergenic | 25.0% |
| !!! | CATTATGTCTTTGTTTTTCT+TGG | + | chr4_2:54336016-54336035 | Msa0607520:intron | 25.0% |
| ! | TATACTTCTCAGTCTATATT+GGG | - | chr4_2:54336167-54336186 | None:intergenic | 25.0% |
| ! | TTATACTTCTCAGTCTATAT+TGG | - | chr4_2:54336168-54336187 | None:intergenic | 25.0% |
| !! | ACTGAGAAGTATAAACATAT+TGG | + | chr4_2:54336174-54336193 | Msa0607520:intron | 25.0% |
| !!! | TAAACATATTGGTTTGATAC+TGG | + | chr4_2:54336185-54336204 | Msa0607520:intron | 25.0% |
| !!! | AAACATATTGGTTTGATACT+GGG | + | chr4_2:54336186-54336205 | Msa0607520:intron | 25.0% |
| ! | AAAAAGCTAAGTTATCAAAG+TGG | + | chr4_2:54336287-54336306 | Msa0607520:intron | 25.0% |
| ! | GAAAATTGCTATAAAGAGAA+AGG | + | chr4_2:54336380-54336399 | Msa0607520:intron | 25.0% |
| !! | ATCTTTTCTATTCCTTCAAT+TGG | + | chr4_2:54336471-54336490 | Msa0607520:intron | 25.0% |
| ! | GTAGCAAATTACATGTATTA+TGG | - | chr4_2:54336504-54336523 | None:intergenic | 25.0% |
| ! | AAAAAGTTAAAGACTTTAGG+GGG | - | chr4_2:54336650-54336669 | None:intergenic | 25.0% |
| ! | CACTATAACTATTGTTCATA+CGG | - | chr4_2:54336686-54336705 | None:intergenic | 25.0% |
| ! | CAATACTCGAAACTTATATA+TGG | + | chr4_2:54336743-54336762 | Msa0607520:intron | 25.0% |
| !!! | AAAAATTAATTTTAGTGGGC+TGG | + | chr4_2:54337297-54337316 | Msa0607520:intron | 25.0% |
| !!! | AAAATTAATTTTAGTGGGCT+GGG | + | chr4_2:54337298-54337317 | Msa0607520:intron | 25.0% |
| ! | TTGTTAATTAGTTCGGTTAT+CGG | - | chr4_2:54337543-54337562 | None:intergenic | 25.0% |
| !! | GTGTCTTTTGTTAATTAGTT+CGG | - | chr4_2:54337550-54337569 | None:intergenic | 25.0% |
| ! | ATTATAAAAACATTCCAGAG+CGG | - | chr4_2:54337603-54337622 | None:intergenic | 25.0% |
| ! | ACATCATTTCACACATTTAA+AGG | + | chr4_2:54337648-54337667 | Msa0607520:intron | 25.0% |
| ! | TTGTATTGTGTCAATCTAAT+AGG | - | chr4_2:54337713-54337732 | None:intergenic | 25.0% |
| ! | CCACAAAATATATAAACAGA+AGG | - | chr4_2:54337878-54337897 | None:intergenic | 25.0% |
| !! | CCTTCTGTTTATATATTTTG+TGG | + | chr4_2:54337875-54337894 | Msa0607520:intron | 25.0% |
| ! | TTATGGGCATTAAAATCAAA+AGG | - | chr4_2:54338693-54338712 | None:intergenic | 25.0% |
| ! | ACTACATATGTTAACAGAAA+TGG | - | chr4_2:54339293-54339312 | None:intergenic | 25.0% |
| CACAATCAAGATCTTCAATT+TGG | + | chr4_2:54333692-54333711 | Msa0607520:CDS | 30.0% | |
| TGAAAGAGAAGATCAAGAAT+GGG | - | chr4_2:54333841-54333860 | None:intergenic | 30.0% | |
| ATGAAAGAGAAGATCAAGAA+TGG | - | chr4_2:54333842-54333861 | None:intergenic | 30.0% | |
| ATTCTTGATCTTCTCTTTCA+TGG | + | chr4_2:54333841-54333860 | Msa0607520:CDS | 30.0% | |
| TTCTTGATCTTCTCTTTCAT+GGG | + | chr4_2:54333842-54333861 | Msa0607520:CDS | 30.0% | |
| AAACACCTCATTTCCTTAAT+GGG | - | chr4_2:54333959-54333978 | None:intergenic | 30.0% | |
| AAAACACCTCATTTCCTTAA+TGG | - | chr4_2:54333960-54333979 | None:intergenic | 30.0% | |
| ATAGACATGCTCATAACTTT+AGG | + | chr4_2:54334075-54334094 | Msa0607520:CDS | 30.0% | |
| TAGACATGCTCATAACTTTA+GGG | + | chr4_2:54334076-54334095 | Msa0607520:CDS | 30.0% | |
| TATCATATCTAGAGGATTGA+GGG | - | chr4_2:54334166-54334185 | None:intergenic | 30.0% | |
| AGATATGATACAGGACTTAA+AGG | + | chr4_2:54334176-54334195 | Msa0607520:CDS | 30.0% | |
| ! | GTCAAGGTAGTCTTTTATAT+TGG | + | chr4_2:54334239-54334258 | Msa0607520:intron | 30.0% |
| !! | TGTATCTTGGTGTTTCAATA+AGG | + | chr4_2:54334284-54334303 | Msa0607520:intron | 30.0% |
| TGGTATAACATATTTAGTCG+AGG | + | chr4_2:54334354-54334373 | Msa0607520:intron | 30.0% | |
| ACATATTTAGTCGAGGAAAA+TGG | + | chr4_2:54334361-54334380 | Msa0607520:intron | 30.0% | |
| !! | TTCCAGGGATTTTGTTTAAA+AGG | + | chr4_2:54334454-54334473 | Msa0607520:intron | 30.0% |
| !! | TCCAGGGATTTTGTTTAAAA+GGG | + | chr4_2:54334455-54334474 | Msa0607520:intron | 30.0% |
| ! | TTTTACTCAATACCAACCAT+TGG | - | chr4_2:54334491-54334510 | None:intergenic | 30.0% |
| ATTGTTGGTACAAATTGCAA+TGG | - | chr4_2:54334648-54334667 | None:intergenic | 30.0% | |
| ! | AAGACATGTATCGTGTTTTT+CGG | + | chr4_2:54334771-54334790 | Msa0607520:intron | 30.0% |
| !! | ATTTTTGTTCTAGGCTAAAG+AGG | + | chr4_2:54335057-54335076 | Msa0607520:intron | 30.0% |
| TGACAAACCTAATAATTGGT+TGG | + | chr4_2:54335258-54335277 | Msa0607520:intron | 30.0% | |
| GAGATAATGATTCAATCCAT+AGG | + | chr4_2:54335328-54335347 | Msa0607520:intron | 30.0% | |
| AGTGTTATCATATCTACCTA+TGG | - | chr4_2:54335347-54335366 | None:intergenic | 30.0% | |
| !!! | TCAGCTATCTTTGTCATTTT+AGG | + | chr4_2:54335367-54335386 | Msa0607520:intron | 30.0% |
| !!! | CAGCTATCTTTGTCATTTTA+GGG | + | chr4_2:54335368-54335387 | Msa0607520:intron | 30.0% |
| !!! | AGCTATCTTTGTCATTTTAG+GGG | + | chr4_2:54335369-54335388 | Msa0607520:intron | 30.0% |
| CAAATTATTGACAGGTTTCA+TGG | - | chr4_2:54335625-54335644 | None:intergenic | 30.0% | |
| CAAATTATTGACAGGTTTCA+TGG | - | chr4_2:54335625-54335644 | None:intergenic | 30.0% | |
| ! | CTTGAGAAGAGTATATAAAG+AGG | - | chr4_2:54336110-54336129 | None:intergenic | 30.0% |
| GGAAGACTAAATTGTTAAGT+TGG | - | chr4_2:54336212-54336231 | None:intergenic | 30.0% | |
| GAAAAGATAACTGGAACAAA+AGG | - | chr4_2:54336459-54336478 | None:intergenic | 30.0% | |
| GAAGGAATAGAAAAGATAAC+TGG | - | chr4_2:54336468-54336487 | None:intergenic | 30.0% | |
| TATGGAATCAATCCAATTGA+AGG | - | chr4_2:54336486-54336505 | None:intergenic | 30.0% | |
| ! | GGGTATTGCATTTATTAAAG+GGG | - | chr4_2:54336711-54336730 | None:intergenic | 30.0% |
| !! | GGGGTATTGCATTTATTAAA+GGG | - | chr4_2:54336712-54336731 | None:intergenic | 30.0% |
| !! | AGGGGTATTGCATTTATTAA+AGG | - | chr4_2:54336713-54336732 | None:intergenic | 30.0% |
| !! | TTGATATGGCTTGGAATTTT+CGG | + | chr4_2:54336802-54336821 | Msa0607520:intron | 30.0% |
| !!! | AAATTAATTTTAGTGGGCTG+GGG | + | chr4_2:54337299-54337318 | Msa0607520:intron | 30.0% |
| !! | ACATTAAACCCCATTTTTGT+TGG | - | chr4_2:54337352-54337371 | None:intergenic | 30.0% |
| AACAAAAATGGGGTTTAATG+TGG | + | chr4_2:54337351-54337370 | Msa0607520:intron | 30.0% | |
| ACAAAAATGGGGTTTAATGT+GGG | + | chr4_2:54337352-54337371 | Msa0607520:intron | 30.0% | |
| !! | TTTAATGTGGGCTTTTTAAG+TGG | + | chr4_2:54337364-54337383 | Msa0607520:intron | 30.0% |
| !!! | TTAATGTGGGCTTTTTAAGT+GGG | + | chr4_2:54337365-54337384 | Msa0607520:intron | 30.0% |
| ! | TCTTCTGCTGGTAATTTTAT+GGG | + | chr4_2:54337492-54337511 | Msa0607520:intron | 30.0% |
| TTATAAAAACATTCCAGAGC+GGG | - | chr4_2:54337602-54337621 | None:intergenic | 30.0% | |
| ATAAACATCAGGAGGATTAA+GGG | - | chr4_2:54337812-54337831 | None:intergenic | 30.0% | |
| AATAAACATCAGGAGGATTA+AGG | - | chr4_2:54337813-54337832 | None:intergenic | 30.0% | |
| !!! | TCGCAAGTTTTAGATCATTT+GGG | + | chr4_2:54338015-54338034 | Msa0607520:intron | 30.0% |
| !!! | ATCCATAGAAGACTAGTTTT+TGG | + | chr4_2:54338046-54338065 | Msa0607520:intron | 30.0% |
| !!! | TCCATAGAAGACTAGTTTTT+GGG | + | chr4_2:54338047-54338066 | Msa0607520:intron | 30.0% |
| ! | ATCCAAAGAAAGTTTGTTCA+AGG | + | chr4_2:54338229-54338248 | Msa0607520:intron | 30.0% |
| ACAAGACATTATCTTGCATA+GGG | - | chr4_2:54338294-54338313 | None:intergenic | 30.0% | |
| AACAAGACATTATCTTGCAT+AGG | - | chr4_2:54338295-54338314 | None:intergenic | 30.0% | |
| ATGTATGTAACAAACCTACA+CGG | - | chr4_2:54338414-54338433 | None:intergenic | 30.0% | |
| ACAGCAATAAGTGCATTAAT+GGG | - | chr4_2:54338469-54338488 | None:intergenic | 30.0% | |
| TACAGCAATAAGTGCATTAA+TGG | - | chr4_2:54338470-54338489 | None:intergenic | 30.0% | |
| TAATGCACTTATTGCTGTAA+AGG | + | chr4_2:54338471-54338490 | Msa0607520:CDS | 30.0% | |
| AATGCACTTATTGCTGTAAA+GGG | + | chr4_2:54338472-54338491 | Msa0607520:CDS | 30.0% | |
| ATGCAATGTTGAATTGTTAG+AGG | + | chr4_2:54338633-54338652 | Msa0607520:intron | 30.0% | |
| ! | TAGAGGTTTAAGTGTGTTTT+TGG | + | chr4_2:54338650-54338669 | Msa0607520:intron | 30.0% |
| TTTCATGTTTGAATTGATCG+TGG | + | chr4_2:54338755-54338774 | Msa0607520:intron | 30.0% | |
| TGATGACACCAATCAAAATA+TGG | - | chr4_2:54338844-54338863 | None:intergenic | 30.0% | |
| GTAGATGAGTGATGAATTTA+AGG | - | chr4_2:54338874-54338893 | None:intergenic | 30.0% | |
| ATCAAAATCATTGTTAGCAG+TGG | - | chr4_2:54339151-54339170 | None:intergenic | 30.0% | |
| ! | CAACTCATGTTTAAAGTTCT+TGG | + | chr4_2:54339177-54339196 | Msa0607520:CDS | 30.0% |
| ! | AATGTATCTGAAGTTATCAG+GGG | - | chr4_2:54339348-54339367 | None:intergenic | 30.0% |
| ! | CAATGTATCTGAAGTTATCA+GGG | - | chr4_2:54339349-54339368 | None:intergenic | 30.0% |
| ! | ACAATGTATCTGAAGTTATC+AGG | - | chr4_2:54339350-54339369 | None:intergenic | 30.0% |
| CTTCAGATACATTGTATGTT+AGG | + | chr4_2:54339355-54339374 | Msa0607520:three_prime_UTR | 30.0% | |
| TGTCTTCAAAGCTGAAAAAT+AGG | - | chr4_2:54339395-54339414 | None:intergenic | 30.0% | |
| CTTGATTGTGAACGCAAAAT+GGG | - | chr4_2:54333682-54333701 | None:intergenic | 35.0% | |
| TCTTGATTGTGAACGCAAAA+TGG | - | chr4_2:54333683-54333702 | None:intergenic | 35.0% | |
| AAGAATGGGAGAATCATAGA+TGG | - | chr4_2:54333827-54333846 | None:intergenic | 35.0% | |
| TCTTGATCTTCTCTTTCATG+GGG | + | chr4_2:54333843-54333862 | Msa0607520:CDS | 35.0% | |
| TGGATAAGAGAAACCCATTA+AGG | + | chr4_2:54333943-54333962 | Msa0607520:intron | 35.0% | |
| AGAAACCCATTAAGGAAATG+AGG | + | chr4_2:54333951-54333970 | Msa0607520:intron | 35.0% | |
| !! | AGGAAATGAGGTGTTTTTGT+TGG | + | chr4_2:54333963-54333982 | Msa0607520:intron | 35.0% |
| !!! | TGTTGTGATTTTTTAGGCTC+AGG | + | chr4_2:54334049-54334068 | Msa0607520:intron | 35.0% |
| ACTCTTCTATCTGTGAAAAC+TGG | + | chr4_2:54334113-54334132 | Msa0607520:CDS | 35.0% | |
| CTCTTCTATCTGTGAAAACT+GGG | + | chr4_2:54334114-54334133 | Msa0607520:CDS | 35.0% | |
| TCTTCTATCTGTGAAAACTG+GGG | + | chr4_2:54334115-54334134 | Msa0607520:CDS | 35.0% | |
| GTATCATATCTAGAGGATTG+AGG | - | chr4_2:54334167-54334186 | None:intergenic | 35.0% | |
| CAATCCTCTAGATATGATAC+AGG | + | chr4_2:54334167-54334186 | Msa0607520:CDS | 35.0% | |
| AAGTCCTGTATCATATCTAG+AGG | - | chr4_2:54334174-54334193 | None:intergenic | 35.0% | |
| ! | AGGTCAAAAGCTTTTGAACA+AGG | + | chr4_2:54334196-54334215 | Msa0607520:CDS | 35.0% |
| ATAAAAGACTACCTTGACTG+CGG | - | chr4_2:54334237-54334256 | None:intergenic | 35.0% | |
| AGCATTTGGATCAATACACT+TGG | + | chr4_2:54334334-54334353 | Msa0607520:intron | 35.0% | |
| GGAAATTGATCCCAAAAATC+AGG | + | chr4_2:54334390-54334409 | Msa0607520:intron | 35.0% | |
| TGGCTAACTGAAATATTCCA+GGG | + | chr4_2:54334439-54334458 | Msa0607520:intron | 35.0% | |
| !! | CCAGGGATTTTGTTTAAAAG+GGG | + | chr4_2:54334456-54334475 | Msa0607520:intron | 35.0% |
| ! | ATAGCTACCAAAAGAGCATA+AGG | - | chr4_2:54334543-54334562 | None:intergenic | 35.0% |
| !! | CAGTACAATGAAGGTATTGT+TGG | - | chr4_2:54334663-54334682 | None:intergenic | 35.0% |
| GGCATAAAACAGTACAATGA+AGG | - | chr4_2:54334672-54334691 | None:intergenic | 35.0% | |
| ! | CATTGTACTGTTTTATGCCA+AGG | + | chr4_2:54334673-54334692 | Msa0607520:intron | 35.0% |
| AACAAGAGGATTGTGAAGTT+TGG | + | chr4_2:54334808-54334827 | Msa0607520:intron | 35.0% | |
| CAAACAAGCAAAAAGATGCA+TGG | - | chr4_2:54335004-54335023 | None:intergenic | 35.0% | |
| ! | CATGCATCTTTTTGCTTGTT+TGG | + | chr4_2:54335002-54335021 | Msa0607520:intron | 35.0% |
| TTCAAGTATCTGCTTGAAGT+TGG | - | chr4_2:54335140-54335159 | None:intergenic | 35.0% | |
| !!! | TCTTTGTCATTTTAGGGGTA+TGG | + | chr4_2:54335374-54335393 | Msa0607520:intron | 35.0% |
| !!! | CTTTGTCATTTTAGGGGTAT+GGG | + | chr4_2:54335375-54335394 | Msa0607520:intron | 35.0% |
| !!! | TTTGTCATTTTAGGGGTATG+GGG | + | chr4_2:54335376-54335395 | Msa0607520:intron | 35.0% |
| ATCACAATCTTGACACTTCA+AGG | + | chr4_2:54335478-54335497 | Msa0607520:CDS | 35.0% | |
| TCACAATCTTGACACTTCAA+GGG | + | chr4_2:54335479-54335498 | Msa0607520:CDS | 35.0% | |
| ATCCAAACATCATCACAACA+AGG | + | chr4_2:54335508-54335527 | Msa0607520:CDS | 35.0% | |
| ! | GAACAAACTCGAGAGTTTTT+AGG | - | chr4_2:54335548-54335567 | None:intergenic | 35.0% |
| CTATCTGTATCATCTGTATC+TGG | - | chr4_2:54335706-54335725 | None:intergenic | 35.0% | |
| AATGGATGAGATTCATGCAA+CGG | - | chr4_2:54335776-54335795 | None:intergenic | 35.0% | |
| GCTCTTGACTGTTGAAATTT+GGG | + | chr4_2:54336038-54336057 | Msa0607520:intron | 35.0% | |
| CTCTTGACTGTTGAAATTTG+GGG | + | chr4_2:54336039-54336058 | Msa0607520:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr4_2:54336063-54336082 | Msa0607520:intron | 35.0% | |
| AACAAGATTCAAGCGTATCA+AGG | - | chr4_2:54336233-54336252 | None:intergenic | 35.0% | |
| ! | ACGCTTGAATCTTGTTTATG+TGG | + | chr4_2:54336237-54336256 | Msa0607520:intron | 35.0% |
| TCAAAGTGGAGTCAACAAAT+TGG | + | chr4_2:54336301-54336320 | Msa0607520:intron | 35.0% | |
| TCACTTGATCCAGTAATTAG+AGG | + | chr4_2:54336344-54336363 | Msa0607520:intron | 35.0% | |
| CACTTGATCCAGTAATTAGA+GGG | + | chr4_2:54336345-54336364 | Msa0607520:intron | 35.0% | |
| AGCAATATCCCTCTAATTAC+TGG | - | chr4_2:54336356-54336375 | None:intergenic | 35.0% | |
| GGAACAAAAGGTCTAGAAAT+AGG | - | chr4_2:54336447-54336466 | None:intergenic | 35.0% | |
| ATTAATCACAACCCTTACAC+AGG | + | chr4_2:54336588-54336607 | Msa0607520:intron | 35.0% | |
| TTAATCACAACCCTTACACA+GGG | + | chr4_2:54336589-54336608 | Msa0607520:intron | 35.0% | |
| GTAGAGCTGTCAATTTGATA+TGG | + | chr4_2:54336788-54336807 | Msa0607520:intron | 35.0% | |
| TTTAAACCCCCTTTACATGT+GGG | - | chr4_2:54336834-54336853 | None:intergenic | 35.0% | |
| ! | TTTTAAACCCCCTTTACATG+TGG | - | chr4_2:54336835-54336854 | None:intergenic | 35.0% |
| ! | AAATTGGCCCCATTTTACAT+AGG | + | chr4_2:54336866-54336885 | Msa0607520:intron | 35.0% |
| TATTGGGGCCTATGTAAAAT+GGG | - | chr4_2:54336877-54336896 | None:intergenic | 35.0% | |
| TTGTAGGGCTTAACACTATT+GGG | - | chr4_2:54336893-54336912 | None:intergenic | 35.0% | |
| TTTGTAGGGCTTAACACTAT+TGG | - | chr4_2:54336894-54336913 | None:intergenic | 35.0% | |
| ! | GGGCTGATGTATATTTTGTA+GGG | - | chr4_2:54336908-54336927 | None:intergenic | 35.0% |
| ! | TGGGCTGATGTATATTTTGT+AGG | - | chr4_2:54336909-54336928 | None:intergenic | 35.0% |
| ! | ACTTTTCGCCTGAAAATTTC+TGG | - | chr4_2:54337062-54337081 | None:intergenic | 35.0% |
| !! | AGAAATTTTCAGGCGAAAAG+TGG | + | chr4_2:54337061-54337080 | Msa0607520:intron | 35.0% |
| !!! | TAATGTGGGCTTTTTAAGTG+GGG | + | chr4_2:54337366-54337385 | Msa0607520:intron | 35.0% |
| TAATCATAGCTTCAGAGTAG+AGG | - | chr4_2:54337418-54337437 | None:intergenic | 35.0% | |
| ! | GTCTTCTGCTGGTAATTTTA+TGG | + | chr4_2:54337491-54337510 | Msa0607520:intron | 35.0% |
| ! | TTTGAAGACCAAACTGACTT+AGG | + | chr4_2:54337571-54337590 | Msa0607520:intron | 35.0% |
| !!! | GTCGCAAGTTTTAGATCATT+TGG | + | chr4_2:54338014-54338033 | Msa0607520:intron | 35.0% |
| !!! | CGCAAGTTTTAGATCATTTG+GGG | + | chr4_2:54338016-54338035 | Msa0607520:intron | 35.0% |
| !! | TCCCAAAAACTAGTCTTCTA+TGG | - | chr4_2:54338051-54338070 | None:intergenic | 35.0% |
| AAGGGCTTATATGTAAGCAA+TGG | - | chr4_2:54338195-54338214 | None:intergenic | 35.0% | |
| GGATTGCAATGAAAAGTCAA+GGG | - | chr4_2:54338213-54338232 | None:intergenic | 35.0% | |
| TGGATTGCAATGAAAAGTCA+AGG | - | chr4_2:54338214-54338233 | None:intergenic | 35.0% | |
| GACCTTGAACAAACTTTCTT+TGG | - | chr4_2:54338234-54338253 | None:intergenic | 35.0% | |
| AGTAGTTGAGAACTGTTTAC+AGG | + | chr4_2:54338355-54338374 | Msa0607520:intron | 35.0% | |
| CTGTTTACAGGTGGAATTAT+CGG | + | chr4_2:54338367-54338386 | Msa0607520:intron | 35.0% | |
| TGTTTACAGGTGGAATTATC+GGG | + | chr4_2:54338368-54338387 | Msa0607520:intron | 35.0% | |
| ATCTATAGCAAGAACGAAGA+AGG | + | chr4_2:54338546-54338565 | Msa0607520:intron | 35.0% | |
| TCAAAAGGTGGTATATTTGC+AGG | - | chr4_2:54338678-54338697 | None:intergenic | 35.0% | |
| TGGGCATTAAAATCAAAAGG+TGG | - | chr4_2:54338690-54338709 | None:intergenic | 35.0% | |
| ! | TTTTCCAGCCTGTTGAAATA+TGG | + | chr4_2:54338974-54338993 | Msa0607520:intron | 35.0% |
| TTTCCAGCCTGTTGAAATAT+GGG | + | chr4_2:54338975-54338994 | Msa0607520:intron | 35.0% | |
| ATCATCTCCCATATTTCAAC+AGG | - | chr4_2:54338985-54339004 | None:intergenic | 35.0% | |
| TATCACAATGCCAAAAGCAA+TGG | + | chr4_2:54339026-54339045 | Msa0607520:CDS | 35.0% | |
| TTCACCAGCAAAGATAGAAT+TGG | - | chr4_2:54339118-54339137 | None:intergenic | 35.0% | |
| ! | GGATGATGATGAAACTAATG+AGG | + | chr4_2:54339224-54339243 | Msa0607520:CDS | 35.0% |
| CTACTCTCTTCTTCCTTTAT+AGG | + | chr4_2:54339320-54339339 | Msa0607520:three_prime_UTR | 35.0% | |
| !!! | GTTTCTGGGGCCATTTTTTA+TGG | - | chr4_2:54333779-54333798 | None:intergenic | 40.0% |
| TCTTTGGTCCAATCGTTTCT+GGG | - | chr4_2:54333793-54333812 | None:intergenic | 40.0% | |
| ! | GATGGATTTGACTTCCTCTT+TGG | - | chr4_2:54333809-54333828 | None:intergenic | 40.0% |
| CTTCTATCTGTGAAAACTGG+GGG | + | chr4_2:54334116-54334135 | Msa0607520:CDS | 40.0% | |
| TTCTATCTGTGAAAACTGGG+GGG | + | chr4_2:54334117-54334136 | Msa0607520:CDS | 40.0% | |
| AGTCGAGGAAAATGGATAAG+TGG | + | chr4_2:54334369-54334388 | Msa0607520:intron | 40.0% | |
| GTGGCTAACTGAAATATTCC+AGG | + | chr4_2:54334438-54334457 | Msa0607520:intron | 40.0% | |
| ! | CCCCTTTTAAACAAAATCCC+TGG | - | chr4_2:54334459-54334478 | None:intergenic | 40.0% |
| GCATAAGGCTCACAGAAATA+AGG | - | chr4_2:54334528-54334547 | None:intergenic | 40.0% | |
| GGTACAAATTGCAATGGCTT+TGG | - | chr4_2:54334642-54334661 | None:intergenic | 40.0% | |
| !! | TGTATCGTGTTTTTCGGATG+TGG | + | chr4_2:54334777-54334796 | Msa0607520:intron | 40.0% |
| ATGTGGCTCTTCAAAACAAG+AGG | + | chr4_2:54334794-54334813 | Msa0607520:intron | 40.0% | |
| ! | CTTTAGAGGGTAAAGAGCAA+CGG | - | chr4_2:54334951-54334970 | None:intergenic | 40.0% |
| GTGAAGGAATGCACTTTAGA+GGG | - | chr4_2:54334964-54334983 | None:intergenic | 40.0% | |
| AACCTAATAATTGGTTGGCG+TGG | + | chr4_2:54335263-54335282 | Msa0607520:intron | 40.0% | |
| ATCTTTATCCAGCATGCCAA+GGG | - | chr4_2:54335418-54335437 | None:intergenic | 40.0% | |
| ! | GTCCTTGTTGTGATGATGTT+TGG | - | chr4_2:54335513-54335532 | None:intergenic | 40.0% |
| GCAGGGATTAATGTTTGTAG+TGG | + | chr4_2:54335573-54335592 | Msa0607520:CDS | 40.0% | |
| ACAGGTTTCATGGTATTCGA+TGG | - | chr4_2:54335615-54335634 | None:intergenic | 40.0% | |
| GGCTCTTGACTGTTGAAATT+TGG | + | chr4_2:54336037-54336056 | Msa0607520:intron | 40.0% | |
| AAAATCCTCACCTTACAAGC+CGG | - | chr4_2:54336085-54336104 | None:intergenic | 40.0% | |
| ! | AGAGTCTTATCTATCCGATG+TGG | + | chr4_2:54336128-54336147 | Msa0607520:intron | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | + | chr4_2:54336129-54336148 | Msa0607520:intron | 40.0% |
| TAATCACAACCCTTACACAG+GGG | + | chr4_2:54336590-54336609 | Msa0607520:intron | 40.0% | |
| AATTGACAGCTCTACTTCAG+AGG | - | chr4_2:54336783-54336802 | None:intergenic | 40.0% | |
| GCTGTCAATTTGATATGGCT+TGG | + | chr4_2:54336793-54336812 | Msa0607520:intron | 40.0% | |
| ATTGGGGCCTATGTAAAATG+GGG | - | chr4_2:54336876-54336895 | None:intergenic | 40.0% | |
| CTATTGGGGCCTATGTAAAA+TGG | - | chr4_2:54336878-54336897 | None:intergenic | 40.0% | |
| TGTAGGGCTTAACACTATTG+GGG | - | chr4_2:54336892-54336911 | None:intergenic | 40.0% | |
| TGAAAAAAGATGGGGCTTGT+GGG | - | chr4_2:54336928-54336947 | None:intergenic | 40.0% | |
| !! | AATTTTCAGGCGAAAAGTGG+TGG | + | chr4_2:54337064-54337083 | Msa0607520:intron | 40.0% |
| ATTAAAAAATCAGCCACCGC+CGG | - | chr4_2:54337141-54337160 | None:intergenic | 40.0% | |
| ! | TTTTGTGGGCTTAGTGACAA+AGG | - | chr4_2:54337279-54337298 | None:intergenic | 40.0% |
| ! | TTAAGTGGGGCTTTGCATTT+TGG | + | chr4_2:54337379-54337398 | Msa0607520:intron | 40.0% |
| ! | TAAGTGGGGCTTTGCATTTT+GGG | + | chr4_2:54337380-54337399 | Msa0607520:intron | 40.0% |
| ATTCTTACTGTGTCTTCTGC+TGG | + | chr4_2:54337480-54337499 | Msa0607520:intron | 40.0% | |
| ATGCTGTACAGTATGAGACT+AGG | - | chr4_2:54337751-54337770 | None:intergenic | 40.0% | |
| !! | GAGATCCTGAGTTTTGATCA+TGG | + | chr4_2:54338141-54338160 | Msa0607520:intron | 40.0% |
| ! | AGCTAGGATTTTATCTCGAG+GGG | - | chr4_2:54338169-54338188 | None:intergenic | 40.0% |
| ! | GAGCTAGGATTTTATCTCGA+GGG | - | chr4_2:54338170-54338189 | None:intergenic | 40.0% |
| GGCTTATATGTAAGCAATGG+AGG | - | chr4_2:54338192-54338211 | None:intergenic | 40.0% | |
| AGTTGAGAACTGTTTACAGG+TGG | + | chr4_2:54338358-54338377 | Msa0607520:intron | 40.0% | |
| ! | AGTCCTAGTTGATGCTGTTA+GGG | + | chr4_2:54338787-54338806 | Msa0607520:intron | 40.0% |
| ! | GATAACCTGACCATTGCTTT+TGG | - | chr4_2:54339039-54339058 | None:intergenic | 40.0% |
| GTTTCATCATCATCCAAGCT+TGG | - | chr4_2:54339219-54339238 | None:intergenic | 40.0% | |
| ! | AGCTGCTTCTTCTAGTTAGT+TGG | + | chr4_2:54339263-54339282 | Msa0607520:exon | 40.0% |
| AGGAAGAAGAGAGTAGTTGA+AGG | - | chr4_2:54339316-54339335 | None:intergenic | 40.0% | |
| AAAATGGCCCCAGAAACGAT+TGG | + | chr4_2:54333782-54333801 | Msa0607520:CDS | 45.0% | |
| CTTTGGTCCAATCGTTTCTG+GGG | - | chr4_2:54333792-54333811 | None:intergenic | 45.0% | |
| CTCTTTGGTCCAATCGTTTC+TGG | - | chr4_2:54333794-54333813 | None:intergenic | 45.0% | |
| CAGAAACGATTGGACCAAAG+AGG | + | chr4_2:54333792-54333811 | Msa0607520:CDS | 45.0% | |
| GAACAAGGATGCTGTTCTTC+AGG | + | chr4_2:54334211-54334230 | Msa0607520:CDS | 45.0% | |
| AAAGGGGAATCTGACTCCAA+TGG | + | chr4_2:54334472-54334491 | Msa0607520:intron | 45.0% | |
| !! | CTGTGAGCCTTATGCTCTTT+TGG | + | chr4_2:54334533-54334552 | Msa0607520:intron | 45.0% |
| CGTGAAGGAATGCACTTTAG+AGG | - | chr4_2:54334965-54334984 | None:intergenic | 45.0% | |
| TTGTATACGCACATGCGTGA+AGG | - | chr4_2:54334980-54334999 | None:intergenic | 45.0% | |
| ! | TTGTTCTAGGCTAAAGAGGC+TGG | + | chr4_2:54335061-54335080 | Msa0607520:intron | 45.0% |
| ! | TGTTCTAGGCTAAAGAGGCT+GGG | + | chr4_2:54335062-54335081 | Msa0607520:intron | 45.0% |
| GTCCACGCCAACCAATTATT+AGG | - | chr4_2:54335268-54335287 | None:intergenic | 45.0% | |
| !! | TCATTTTAGGGGTATGGGGA+TGG | + | chr4_2:54335380-54335399 | Msa0607520:intron | 45.0% |
| GATCTTTATCCAGCATGCCA+AGG | - | chr4_2:54335419-54335438 | None:intergenic | 45.0% | |
| TGGCATGCTGGATAAAGATC+AGG | + | chr4_2:54335419-54335438 | Msa0607520:CDS | 45.0% | |
| ATGCTGGATAAAGATCAGGC+TGG | + | chr4_2:54335423-54335442 | Msa0607520:CDS | 45.0% | |
| ! | TCGAGTTTGTTCGTGATGCA+GGG | + | chr4_2:54335556-54335575 | Msa0607520:CDS | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4_2:54336075-54336094 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4_2:54336072-54336091 | Msa0607520:intron | 45.0% |
| TATCTATCCGATGTGGGACT+TGG | + | chr4_2:54336135-54336154 | Msa0607520:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | + | chr4_2:54336136-54336155 | Msa0607520:intron | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | - | chr4_2:54336145-54336164 | None:intergenic | 45.0% | |
| ! | TAAAGACTTTAGGGGGACCA+CGG | - | chr4_2:54336643-54336662 | None:intergenic | 45.0% |
| CTGAAAAAAGATGGGGCTTG+TGG | - | chr4_2:54336929-54336948 | None:intergenic | 45.0% | |
| GCTTAGTGACAAAGGCTTCA+AGG | - | chr4_2:54337271-54337290 | None:intergenic | 45.0% | |
| AAGAAGGGGGCCAACAAAAA+TGG | + | chr4_2:54337339-54337358 | Msa0607520:intron | 45.0% | |
| AGAAGGGGGCCAACAAAAAT+GGG | + | chr4_2:54337340-54337359 | Msa0607520:intron | 45.0% | |
| ! | AAGTGGGGCTTTGCATTTTG+GGG | + | chr4_2:54337381-54337400 | Msa0607520:intron | 45.0% |
| GGGTCTTTCCTAAGTCAGTT+TGG | - | chr4_2:54337582-54337601 | None:intergenic | 45.0% | |
| CTGTACAGTATGAGACTAGG+AGG | - | chr4_2:54337748-54337767 | None:intergenic | 45.0% | |
| GCATGCAGAACTATTGACAG+AGG | + | chr4_2:54337767-54337786 | Msa0607520:intron | 45.0% | |
| ! | GCTAGGATTTTATCTCGAGG+GGG | - | chr4_2:54338168-54338187 | None:intergenic | 45.0% |
| ! | GGAGCTAGGATTTTATCTCG+AGG | - | chr4_2:54338171-54338190 | None:intergenic | 45.0% |
| ATGTAAGCAATGGAGGAGCT+AGG | - | chr4_2:54338185-54338204 | None:intergenic | 45.0% | |
| GCATTAATGGGAACACTCTC+TGG | - | chr4_2:54338457-54338476 | None:intergenic | 45.0% | |
| TCACCTTCTGATCCTGAAGA+GGG | - | chr4_2:54338501-54338520 | None:intergenic | 45.0% | |
| ! | TGCGCATCTTTAGCAGCTTT+TGG | + | chr4_2:54338570-54338589 | Msa0607520:intron | 45.0% |
| ! | GCGCATCTTTAGCAGCTTTT+GGG | + | chr4_2:54338571-54338590 | Msa0607520:intron | 45.0% |
| ! | GAGTCCTAGTTGATGCTGTT+AGG | + | chr4_2:54338786-54338805 | Msa0607520:intron | 45.0% |
| TCTCCCATATTTCAACAGGC+TGG | - | chr4_2:54338981-54339000 | None:intergenic | 45.0% | |
| GATGATCCGCATGATTGCAA+CGG | + | chr4_2:54338999-54339018 | Msa0607520:CDS | 45.0% | |
| CAATGCCAAAAGCAATGGTC+AGG | + | chr4_2:54339031-54339050 | Msa0607520:CDS | 45.0% | |
| GGTGCCAATTCTATCTTTGC+TGG | + | chr4_2:54339111-54339130 | Msa0607520:CDS | 45.0% | |
| ! | TCATCCAAGCTTGGAGCTTT+TGG | - | chr4_2:54339210-54339229 | None:intergenic | 45.0% |
| GTTATCAGGGGAGCCTATAA+AGG | - | chr4_2:54339336-54339355 | None:intergenic | 45.0% | |
| GGGAATCTGACTCCAATGGT+TGG | + | chr4_2:54334476-54334495 | Msa0607520:intron | 50.0% | |
| !!! | TGGGAGTACTCGCTTTTGCA+TGG | + | chr4_2:54335081-54335100 | Msa0607520:CDS | 50.0% |
| !!! | GGGAGTACTCGCTTTTGCAT+GGG | + | chr4_2:54335082-54335101 | Msa0607520:CDS | 50.0% |
| !! | TTTTAGGGGTATGGGGATGG+AGG | + | chr4_2:54335383-54335402 | Msa0607520:intron | 50.0% |
| ! | CTCGAGTTTGTTCGTGATGC+AGG | + | chr4_2:54335555-54335574 | Msa0607520:CDS | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4_2:54336077-54336096 | Msa0607520:intron | 50.0% |
| !!! | GTGGCGGACCAGAAATTTTC+AGG | + | chr4_2:54337051-54337070 | Msa0607520:intron | 50.0% |
| TTTCAGGCGAAAAGTGGTGG+TGG | + | chr4_2:54337067-54337086 | Msa0607520:intron | 50.0% | |
| GAAGGGGGCCAACAAAAATG+GGG | + | chr4_2:54337341-54337360 | Msa0607520:intron | 50.0% | |
| GGGGTCCATGATCAAAACTC+AGG | - | chr4_2:54338149-54338168 | None:intergenic | 50.0% | |
| ACAGGTGGAATTATCGGGCT+TGG | + | chr4_2:54338373-54338392 | Msa0607520:intron | 50.0% | |
| GGAACACTCTCTGGATGTGT+AGG | - | chr4_2:54338448-54338467 | None:intergenic | 50.0% | |
| TGTAAAGGGAACCCCTCTTC+AGG | + | chr4_2:54338486-54338505 | Msa0607520:CDS | 50.0% | |
| AACCCCTCTTCAGGATCAGA+AGG | + | chr4_2:54338495-54338514 | Msa0607520:CDS | 50.0% | |
| CACCTTCTGATCCTGAAGAG+GGG | - | chr4_2:54338500-54338519 | None:intergenic | 50.0% | |
| CTCACCTTCTGATCCTGAAG+AGG | - | chr4_2:54338502-54338521 | None:intergenic | 50.0% | |
| CAGCCCTAACAGCATCAACT+AGG | - | chr4_2:54338793-54338812 | None:intergenic | 50.0% | |
| ! | CTAGTTGATGCTGTTAGGGC+TGG | + | chr4_2:54338791-54338810 | Msa0607520:intron | 50.0% |
| ! | CTGTTAGGGCTGGTGGTTAT+TGG | + | chr4_2:54338801-54338820 | Msa0607520:intron | 50.0% |
| ! | TACGTGCCGTTGCAATCATG+CGG | - | chr4_2:54339008-54339027 | None:intergenic | 50.0% |
| GCAATGGTCAGGTTATCTGC+CGG | + | chr4_2:54339042-54339061 | Msa0607520:CDS | 50.0% | |
| ! | AGAAAGCACAATGCCTGCTC+AGG | - | chr4_2:54339087-54339106 | None:intergenic | 50.0% |
| ! | CAGGCATTGTGCTTTCTAGC+TGG | + | chr4_2:54339090-54339109 | Msa0607520:CDS | 50.0% |
| GCTTCCAAAAGCTCCAAGCT+TGG | + | chr4_2:54339203-54339222 | Msa0607520:CDS | 50.0% | |
| ! | GAAAACTGGGGGGTGTAGTG+AGG | + | chr4_2:54334127-54334146 | Msa0607520:CDS | 55.0% |
| TGTTCTTCAGGCCGCAGTCA+AGG | + | chr4_2:54334223-54334242 | Msa0607520:CDS | 55.0% | |
| GCTGCATGGAGGGATACGAT+AGG | + | chr4_2:54335106-54335125 | Msa0607520:CDS | 55.0% | |
| ! | ATGGAGGTGTGTTGCACCCT+TGG | + | chr4_2:54335399-54335418 | Msa0607520:CDS | 55.0% |
| TCAGGCTGGTGAGCTCAAGA+AGG | + | chr4_2:54335437-54335456 | Msa0607520:CDS | 55.0% | |
| ! | GTGGCTTTGCCCCTGTGTAA+GGG | - | chr4_2:54336602-54336621 | None:intergenic | 55.0% |
| ACCCCCTTTACATGTGGGCT+GGG | - | chr4_2:54336829-54336848 | None:intergenic | 55.0% | |
| AACCCCCTTTACATGTGGGC+TGG | - | chr4_2:54336830-54336849 | None:intergenic | 55.0% | |
| AGCTGTTCGGTCAACAGCAG+AGG | + | chr4_2:54336968-54336987 | Msa0607520:intron | 55.0% | |
| TCAACAGCAGAGGTCAACGC+CGG | + | chr4_2:54336978-54336997 | Msa0607520:intron | 55.0% | |
| !! | AAATTTCTGGTCCGCCACCG+TGG | - | chr4_2:54337049-54337068 | None:intergenic | 55.0% |
| !! | AGGCGAAAAGTGGTGGTGGA+CGG | + | chr4_2:54337071-54337090 | Msa0607520:intron | 55.0% |
| GACTTAGGAAAGACCCGCTC+TGG | + | chr4_2:54337586-54337605 | Msa0607520:intron | 55.0% | |
| TATCGGGCTTGGAGAAGCAG+AGG | + | chr4_2:54338384-54338403 | Msa0607520:CDS | 55.0% | |
| GAAGCAGAGGAAGACCGTGT+AGG | + | chr4_2:54338397-54338416 | Msa0607520:CDS | 55.0% | |
| GTTGATGCTGTTAGGGCTGG+TGG | + | chr4_2:54338794-54338813 | Msa0607520:intron | 55.0% | |
| GGTTATCTGCCGGCAGAGTT+CGG | + | chr4_2:54339052-54339071 | Msa0607520:CDS | 55.0% | |
| !! | GCTTTTGCATGGGCGCTGCA+TGG | + | chr4_2:54335092-54335111 | Msa0607520:CDS | 60.0% |
| ! | TTTGCATGGGCGCTGCATGG+AGG | + | chr4_2:54335095-54335114 | Msa0607520:CDS | 60.0% |
| ! | TTGCATGGGCGCTGCATGGA+GGG | + | chr4_2:54335096-54335115 | Msa0607520:CDS | 60.0% |
| GTGTTGCACCCTTGGCATGC+TGG | + | chr4_2:54335407-54335426 | Msa0607520:CDS | 60.0% | |
| GCTGGTGAGCTCAAGAAGGC+AGG | + | chr4_2:54335441-54335460 | Msa0607520:CDS | 60.0% | |
| ! | GGTGGCTTTGCCCCTGTGTA+AGG | - | chr4_2:54336603-54336622 | None:intergenic | 60.0% |
| GGCCCCAGCCCACATGTAAA+GGG | + | chr4_2:54336823-54336842 | Msa0607520:intron | 60.0% | |
| GCCCCAGCCCACATGTAAAG+GGG | + | chr4_2:54336824-54336843 | Msa0607520:intron | 60.0% | |
| ! | CCCCCTTTACATGTGGGCTG+GGG | - | chr4_2:54336828-54336847 | None:intergenic | 60.0% |
| CCCCAGCCCACATGTAAAGG+GGG | + | chr4_2:54336825-54336844 | Msa0607520:intron | 60.0% | |
| !! | CGAAAAGTGGTGGTGGACGG+CGG | + | chr4_2:54337074-54337093 | Msa0607520:intron | 60.0% |
| CACGGAGAACCGAACTCTGC+CGG | - | chr4_2:54339064-54339083 | None:intergenic | 60.0% | |
| GCACAATGCCTGCTCAGGCA+CGG | - | chr4_2:54339082-54339101 | None:intergenic | 60.0% | |
| CAGGGGCAAAGCCACCACAG+TGG | + | chr4_2:54336607-54336626 | Msa0607520:intron | 65.0% | |
| GCCACCACAGTGGCCTACTG+AGG | + | chr4_2:54336617-54336636 | Msa0607520:intron | 65.0% | |
| GCCTCAGTAGGCCACTGTGG+TGG | - | chr4_2:54336621-54336640 | None:intergenic | 65.0% | |
| ACGGCCTCAGTAGGCCACTG+TGG | - | chr4_2:54336624-54336643 | None:intergenic | 65.0% | |
| ACAGTGGCCTACTGAGGCCG+TGG | + | chr4_2:54336623-54336642 | Msa0607520:intron | 65.0% | |
| CGGCCCCAGCCCACATGTAA+AGG | + | chr4_2:54336822-54336841 | Msa0607520:intron | 65.0% | |
| AGAGGTCAACGCCGGAGCTC+CGG | + | chr4_2:54336986-54337005 | Msa0607520:intron | 65.0% | |
| ACCGACCAACACCGGAGCTC+CGG | - | chr4_2:54337100-54337119 | None:intergenic | 65.0% | |
| !! | AGCTCCGGTGTTGGTCGGTG+CGG | + | chr4_2:54337101-54337120 | Msa0607520:intron | 65.0% |
| ! | ACCACCGCACCGACCAACAC+CGG | - | chr4_2:54337108-54337127 | None:intergenic | 65.0% |
| TTGGTCGGTGCGGTGGTTGC+CGG | + | chr4_2:54337111-54337130 | Msa0607520:intron | 65.0% | |
| TCGGTTCTCCGTGCCTGAGC+AGG | + | chr4_2:54339071-54339090 | Msa0607520:CDS | 65.0% | |
| AGGGGGACCACGGCCTCAGT+AGG | - | chr4_2:54336633-54336652 | None:intergenic | 70.0% | |
| !! | AAGTGGTGGTGGACGGCGGC+CGG | + | chr4_2:54337078-54337097 | Msa0607520:intron | 70.0% |
| !! | GCCGGAGCTCCGGTGTTGGT+CGG | + | chr4_2:54337096-54337115 | Msa0607520:intron | 70.0% |
| !! | TCCGGTGTTGGTCGGTGCGG+TGG | + | chr4_2:54337104-54337123 | Msa0607520:intron | 70.0% |
| TGCGGTGGTTGCCGGAGCTC+CGG | + | chr4_2:54337119-54337138 | Msa0607520:intron | 70.0% | |
| ATCAGCCACCGCCGGAGCTC+CGG | - | chr4_2:54337133-54337152 | None:intergenic | 70.0% | |
| ACCACGGTCGGCCGGAGCTC+CGG | - | chr4_2:54337000-54337019 | None:intergenic | 75.0% | |
| CCGGAACCACCACGGTCGGC+CGG | - | chr4_2:54337008-54337027 | None:intergenic | 75.0% | |
| CCGGCCGACCGTGGTGGTTC+CGG | + | chr4_2:54337005-54337024 | Msa0607520:intron | 75.0% | |
| GCCGACCGTGGTGGTTCCGG+CGG | + | chr4_2:54337008-54337027 | Msa0607520:intron | 75.0% | |
| GCCGCCGGAACCACCACGGT+CGG | - | chr4_2:54337012-54337031 | None:intergenic | 75.0% | |
| GACCGTGGTGGTTCCGGCGG+CGG | + | chr4_2:54337011-54337030 | Msa0607520:intron | 75.0% | |
| CTCCGCCGCCGGAACCACCA+CGG | - | chr4_2:54337016-54337035 | None:intergenic | 75.0% | |
| TGGTTCCGGCGGCGGAGCTC+CGG | + | chr4_2:54337019-54337038 | Msa0607520:intron | 75.0% | |
| GGCGGAGCTCCGGCGATCCA+CGG | + | chr4_2:54337029-54337048 | Msa0607520:intron | 75.0% | |
| GGAGCTCCGGCGATCCACGG+TGG | + | chr4_2:54337032-54337051 | Msa0607520:intron | 75.0% | |
| GCTCCGGCGATCCACGGTGG+CGG | + | chr4_2:54337035-54337054 | Msa0607520:intron | 75.0% | |
| GGTCCGCCACCGTGGATCGC+CGG | - | chr4_2:54337041-54337060 | None:intergenic | 75.0% | |
| GGTGGTTGCCGGAGCTCCGG+CGG | + | chr4_2:54337122-54337141 | Msa0607520:intron | 75.0% | |
| ! | GGAGCTCCGGCCGACCGTGG+TGG | + | chr4_2:54336999-54337018 | Msa0607520:intron | 80.0% |
| ! | GATCGCCGGAGCTCCGCCGC+CGG | - | chr4_2:54337027-54337046 | None:intergenic | 80.0% |
| ! | GTGGACGGCGGCCGGAGCTC+CGG | + | chr4_2:54337086-54337105 | Msa0607520:intron | 80.0% |
| ! | GGCGGCCGGAGCTCCGGTGT+TGG | + | chr4_2:54337092-54337111 | Msa0607520:intron | 80.0% |
| ! | GGTTGCCGGAGCTCCGGCGG+TGG | + | chr4_2:54337125-54337144 | Msa0607520:intron | 80.0% |
| ! | GCCGGAGCTCCGGCCGACCG+TGG | + | chr4_2:54336996-54337015 | Msa0607520:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 54333596 | 54339491 | 54333596 | ID=Msa0607520;Name=Msa0607520 |
| chr4_2 | mRNA | 54333596 | 54339491 | 54333596 | ID=Msa0607520-mRNA-1;Parent=Msa0607520;Name=Msa0607520-mRNA-1;_AED=0.08;_eAED=0.08;_QI=45|0.83|0.85|1|0.5|0.57|7|210|375 |
| chr4_2 | exon | 54333596 | 54333633 | 54333596 | ID=Msa0607520-mRNA-1:exon:13580;Parent=Msa0607520-mRNA-1 |
| chr4_2 | exon | 54333657 | 54333864 | 54333657 | ID=Msa0607520-mRNA-1:exon:13581;Parent=Msa0607520-mRNA-1 |
| chr4_2 | exon | 54334071 | 54334244 | 54334071 | ID=Msa0607520-mRNA-1:exon:13582;Parent=Msa0607520-mRNA-1 |
| chr4_2 | exon | 54335070 | 54335176 | 54335070 | ID=Msa0607520-mRNA-1:exon:13583;Parent=Msa0607520-mRNA-1 |
| chr4_2 | exon | 54335389 | 54335594 | 54335389 | ID=Msa0607520-mRNA-1:exon:13584;Parent=Msa0607520-mRNA-1 |
| chr4_2 | exon | 54338377 | 54338516 | 54338377 | ID=Msa0607520-mRNA-1:exon:13585;Parent=Msa0607520-mRNA-1 |
| chr4_2 | exon | 54338982 | 54339491 | 54338982 | ID=Msa0607520-mRNA-1:exon:13586;Parent=Msa0607520-mRNA-1 |
| chr4_2 | five_prime_UTR | 54333596 | 54333633 | 54333596 | ID=Msa0607520-mRNA-1:five_prime_utr;Parent=Msa0607520-mRNA-1 |
| chr4_2 | five_prime_UTR | 54333657 | 54333663 | 54333657 | ID=Msa0607520-mRNA-1:five_prime_utr;Parent=Msa0607520-mRNA-1 |
| chr4_2 | CDS | 54333664 | 54333864 | 54333664 | ID=Msa0607520-mRNA-1:cds;Parent=Msa0607520-mRNA-1 |
| chr4_2 | CDS | 54334071 | 54334244 | 54334071 | ID=Msa0607520-mRNA-1:cds;Parent=Msa0607520-mRNA-1 |
| chr4_2 | CDS | 54335070 | 54335176 | 54335070 | ID=Msa0607520-mRNA-1:cds;Parent=Msa0607520-mRNA-1 |
| chr4_2 | CDS | 54335389 | 54335594 | 54335389 | ID=Msa0607520-mRNA-1:cds;Parent=Msa0607520-mRNA-1 |
| chr4_2 | CDS | 54338377 | 54338516 | 54338377 | ID=Msa0607520-mRNA-1:cds;Parent=Msa0607520-mRNA-1 |
| chr4_2 | CDS | 54338982 | 54339281 | 54338982 | ID=Msa0607520-mRNA-1:cds;Parent=Msa0607520-mRNA-1 |
| chr4_2 | three_prime_UTR | 54339282 | 54339491 | 54339282 | ID=Msa0607520-mRNA-1:three_prime_utr;Parent=Msa0607520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
