Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131590 | XP_003591188.1 | 99.221 | 385 | 3 | 0 | 1 | 385 | 1 | 385 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131590 | sp|Q8LB54|PRP38_ARATH | 84.783 | 184 | 28 | 0 | 1 | 184 | 1 | 184 | 1.75e-116 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131590 | A2Q158 | 99.221 | 385 | 3 | 0 | 1 | 385 | 1 | 385 | 0.0 | 758 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0131590 | 0.813935 | 1.989178e-51 | -8.615850e-47 |
| Msa0012940 | Msa0131590 | 0.807529 | 4.835923e-50 | -8.615850e-47 |
| Msa0029630 | Msa0131590 | 0.864137 | 1.509142e-64 | -8.615850e-47 |
| Msa0033880 | Msa0131590 | 0.804903 | 1.727918e-49 | -8.615850e-47 |
| Msa0038000 | Msa0131590 | 0.845679 | 3.494557e-59 | -8.615850e-47 |
| Msa0038440 | Msa0131590 | 0.829737 | 4.355160e-55 | -8.615850e-47 |
| Msa0043860 | Msa0131590 | 0.803408 | 3.536900e-49 | -8.615850e-47 |
| Msa0053240 | Msa0131590 | 0.812475 | 4.161549e-51 | -8.615850e-47 |
| Msa0070430 | Msa0131590 | 0.812944 | 3.286076e-51 | -8.615850e-47 |
| Msa0079920 | Msa0131590 | 0.837828 | 4.127854e-57 | -8.615850e-47 |
| Msa0080190 | Msa0131590 | 0.896136 | 4.925074e-76 | -8.615850e-47 |
| Msa0091610 | Msa0131590 | 0.801173 | 1.020048e-48 | -8.615850e-47 |
| Msa0093010 | Msa0131590 | 0.801943 | 7.093398e-49 | -8.615850e-47 |
| Msa0093850 | Msa0131590 | 0.838243 | 3.228757e-57 | -8.615850e-47 |
| Msa0097950 | Msa0131590 | 0.818497 | 1.900564e-52 | -8.615850e-47 |
| Msa0098740 | Msa0131590 | 0.813589 | 2.370938e-51 | -8.615850e-47 |
| Msa0119900 | Msa0131590 | 0.825123 | 5.564332e-54 | -8.615850e-47 |
| Msa0123510 | Msa0131590 | 0.817109 | 3.909924e-52 | -8.615850e-47 |
| Msa0125450 | Msa0131590 | 0.857340 | 1.744781e-62 | -8.615850e-47 |
| Msa0125540 | Msa0131590 | 0.856253 | 3.645048e-62 | -8.615850e-47 |
| Msa0127850 | Msa0131590 | 0.818934 | 1.512444e-52 | -8.615850e-47 |
| Msa0131590 | Msa0132830 | 0.832412 | 9.596227e-56 | -8.615850e-47 |
| Msa0131590 | Msa0136120 | 0.806589 | 7.644143e-50 | -8.615850e-47 |
| Msa0131590 | Msa0138360 | 0.839750 | 1.314184e-57 | -8.615850e-47 |
| Msa0131590 | Msa0147980 | 0.853048 | 3.091400e-61 | -8.615850e-47 |
| Msa0131590 | Msa0150260 | 0.800336 | 1.511978e-48 | -8.615850e-47 |
| Msa0131590 | Msa0169610 | 0.864462 | 1.194878e-64 | -8.615850e-47 |
| Msa0131590 | Msa0172980 | 0.872459 | 3.130362e-67 | -8.615850e-47 |
| Msa0131590 | Msa0177960 | 0.803380 | 3.584000e-49 | -8.615850e-47 |
| Msa0131590 | Msa0198530 | 0.801668 | 8.076268e-49 | -8.615850e-47 |
| Msa0131590 | Msa0202490 | 0.801045 | 1.083654e-48 | -8.615850e-47 |
| Msa0131590 | Msa0226460 | 0.806338 | 8.634561e-50 | -8.615850e-47 |
| Msa0131590 | Msa0230820 | 0.808291 | 3.329722e-50 | -8.615850e-47 |
| Msa0131590 | Msa0237200 | 0.803249 | 3.814992e-49 | -8.615850e-47 |
| Msa0131590 | Msa0244980 | 0.815337 | 9.734493e-52 | -8.615850e-47 |
| Msa0131590 | Msa0245430 | 0.829053 | 6.384184e-55 | -8.615850e-47 |
| Msa0131590 | Msa0245580 | 0.836890 | 7.176319e-57 | -8.615850e-47 |
| Msa0131590 | Msa0247060 | 0.804809 | 1.807160e-49 | -8.615850e-47 |
| Msa0131590 | Msa0257490 | 0.801789 | 7.628014e-49 | -8.615850e-47 |
| Msa0131590 | Msa0269470 | 0.801052 | 1.079807e-48 | -8.615850e-47 |
| Msa0131590 | Msa0278790 | 0.802867 | 4.575986e-49 | -8.615850e-47 |
| Msa0131590 | Msa0281530 | 0.811415 | 7.081145e-51 | -8.615850e-47 |
| Msa0131590 | Msa0284180 | 0.806576 | 7.691073e-50 | -8.615850e-47 |
| Msa0131590 | Msa0295590 | 0.803674 | 3.114985e-49 | -8.615850e-47 |
| Msa0131590 | Msa0296250 | 0.828006 | 1.142567e-54 | -8.615850e-47 |
| Msa0131590 | Msa0296790 | 0.811369 | 7.248058e-51 | -8.615850e-47 |
| Msa0131590 | Msa0307850 | 0.815554 | 8.711950e-52 | -8.615850e-47 |
| Msa0131590 | Msa0317910 | 0.814008 | 1.916990e-51 | -8.615850e-47 |
| Msa0131590 | Msa0320590 | 0.847234 | 1.315428e-59 | -8.615850e-47 |
| Msa0131590 | Msa0324240 | 0.812597 | 3.914263e-51 | -8.615850e-47 |
| Msa0131590 | Msa0341690 | 0.834099 | 3.644749e-56 | -8.615850e-47 |
| Msa0131590 | Msa0343190 | 0.800919 | 1.149812e-48 | -8.615850e-47 |
| Msa0131590 | Msa0348830 | 0.805158 | 1.527736e-49 | -8.615850e-47 |
| Msa0131590 | Msa0363060 | 0.815789 | 7.720440e-52 | -8.615850e-47 |
| Msa0131590 | Msa0363640 | 0.835028 | 2.130141e-56 | -8.615850e-47 |
| Msa0131590 | Msa0365700 | 0.809874 | 1.525246e-50 | -8.615850e-47 |
| Msa0131590 | Msa0376280 | 0.801628 | 8.231723e-49 | -8.615850e-47 |
| Msa0131590 | Msa0377820 | 0.810704 | 1.009963e-50 | -8.615850e-47 |
| Msa0131590 | Msa0378970 | 0.818254 | 2.157464e-52 | -8.615850e-47 |
| Msa0131590 | Msa0385500 | 0.807336 | 5.313141e-50 | -8.615850e-47 |
| Msa0131590 | Msa0413530 | 0.818657 | 1.748259e-52 | -8.615850e-47 |
| Msa0131590 | Msa0423750 | 0.854622 | 1.088742e-61 | -8.615850e-47 |
| Msa0131590 | Msa0426580 | 0.822870 | 1.879480e-53 | -8.615850e-47 |
| Msa0131590 | Msa0434570 | 0.819302 | 1.247360e-52 | -8.615850e-47 |
| Msa0131590 | Msa0434770 | 0.819480 | 1.136353e-52 | -8.615850e-47 |
| Msa0131590 | Msa0443390 | 0.815299 | 9.924611e-52 | -8.615850e-47 |
| Msa0131590 | Msa0458640 | 0.804876 | 1.750050e-49 | -8.615850e-47 |
| Msa0131590 | Msa0470530 | 0.843186 | 1.635526e-58 | -8.615850e-47 |
| Msa0131590 | Msa0472930 | 0.813367 | 2.652702e-51 | -8.615850e-47 |
| Msa0131590 | Msa0474940 | 0.808736 | 2.674477e-50 | -8.615850e-47 |
| Msa0131590 | Msa0478580 | 0.815914 | 7.240595e-52 | -8.615850e-47 |
| Msa0131590 | Msa0511770 | 0.806346 | 8.602954e-50 | -8.615850e-47 |
| Msa0131590 | Msa0517590 | 0.813355 | 2.669658e-51 | -8.615850e-47 |
| Msa0131590 | Msa0518030 | 0.802076 | 6.659066e-49 | -8.615850e-47 |
| Msa0131590 | Msa0524500 | 0.829711 | 4.417079e-55 | -8.615850e-47 |
| Msa0131590 | Msa0527190 | 0.826739 | 2.299394e-54 | -8.615850e-47 |
| Msa0131590 | Msa0531250 | 0.818987 | 1.471139e-52 | -8.615850e-47 |
| Msa0131590 | Msa0547990 | 0.802539 | 5.348635e-49 | -8.615850e-47 |
| Msa0131590 | Msa0581110 | 0.846854 | 1.672110e-59 | -8.615850e-47 |
| Msa0131590 | Msa0588090 | 0.807789 | 4.257047e-50 | -8.615850e-47 |
| Msa0131590 | Msa0593700 | 0.827245 | 1.739957e-54 | -8.615850e-47 |
| Msa0131590 | Msa0595170 | 0.807789 | 4.256945e-50 | -8.615850e-47 |
| Msa0131590 | Msa0603570 | 0.807323 | 5.345904e-50 | -8.615850e-47 |
| Msa0131590 | Msa0607520 | 0.809219 | 2.108586e-50 | -8.615850e-47 |
| Msa0131590 | Msa0610310 | 0.832078 | 1.160622e-55 | -8.615850e-47 |
| Msa0131590 | Msa0614510 | 0.801342 | 9.420630e-49 | -8.615850e-47 |
| Msa0131590 | Msa0618950 | 0.812553 | 4.002112e-51 | -8.615850e-47 |
| Msa0131590 | Msa0628420 | 0.829555 | 4.820866e-55 | -8.615850e-47 |
| Msa0131590 | Msa0631250 | 0.816249 | 6.095422e-52 | -8.615850e-47 |
| Msa0131590 | Msa0633570 | 0.815969 | 7.038248e-52 | -8.615850e-47 |
| Msa0131590 | Msa0634890 | 0.803749 | 3.004944e-49 | -8.615850e-47 |
| Msa0131590 | Msa0644030 | 0.805180 | 1.512051e-49 | -8.615850e-47 |
| Msa0131590 | Msa0647820 | 0.803260 | 3.794434e-49 | -8.615850e-47 |
| Msa0131590 | Msa0679100 | 0.806740 | 7.103540e-50 | -8.615850e-47 |
| Msa0131590 | Msa0687230 | 0.809744 | 1.626459e-50 | -8.615850e-47 |
| Msa0131590 | Msa0690310 | 0.825896 | 3.649507e-54 | -8.615850e-47 |
| Msa0131590 | Msa0690540 | 0.815906 | 7.269720e-52 | -8.615850e-47 |
| Msa0131590 | Msa0693210 | 0.823515 | 1.328977e-53 | -8.615850e-47 |
| Msa0131590 | Msa0694990 | 0.814954 | 1.183983e-51 | -8.615850e-47 |
| Msa0131590 | Msa0699190 | 0.812566 | 3.974455e-51 | -8.615850e-47 |
| Msa0131590 | Msa0704660 | 0.834104 | 3.634172e-56 | -8.615850e-47 |
| Msa0131590 | Msa0741440 | 0.803298 | 3.726696e-49 | -8.615850e-47 |
| Msa0131590 | Msa0744090 | 0.809764 | 1.610312e-50 | -8.615850e-47 |
| Msa0131590 | Msa0744100 | 0.836145 | 1.111076e-56 | -8.615850e-47 |
| Msa0131590 | Msa0752700 | 0.854076 | 1.566355e-61 | -8.615850e-47 |
| Msa0131590 | Msa0755330 | 0.826430 | 2.724571e-54 | -8.615850e-47 |
| Msa0131590 | Msa0781020 | 0.814292 | 1.659619e-51 | -8.615850e-47 |
| Msa0131590 | Msa0786750 | 0.821857 | 3.229775e-53 | -8.615850e-47 |
| Msa0131590 | Msa0788770 | 0.803487 | 3.405836e-49 | -8.615850e-47 |
| Msa0131590 | Msa0794970 | 0.845087 | 5.054126e-59 | -8.615850e-47 |
| Msa0131590 | Msa0808800 | 0.852746 | 3.771981e-61 | -8.615850e-47 |
| Msa0131590 | Msa0822170 | 0.816034 | 6.809652e-52 | -8.615850e-47 |
| Msa0131590 | Msa0822180 | 0.840824 | 6.891605e-58 | -8.615850e-47 |
| Msa0131590 | Msa0825270 | 0.835412 | 1.703930e-56 | -8.615850e-47 |
| Msa0131590 | Msa0825280 | 0.803597 | 3.231926e-49 | -8.615850e-47 |
| Msa0131590 | Msa0828680 | 0.819078 | 1.402909e-52 | -8.615850e-47 |
| Msa0131590 | Msa0831100 | 0.844340 | 8.033095e-59 | -8.615850e-47 |
| Msa0131590 | Msa0833190 | -0.806949 | 6.415396e-50 | -8.615850e-47 |
| Msa0131590 | Msa0834260 | 0.807725 | 4.392972e-50 | -8.615850e-47 |
| Msa0131590 | Msa0836500 | 0.810729 | 9.973742e-51 | -8.615850e-47 |
| Msa0131590 | Msa0838370 | 0.807147 | 5.826090e-50 | -8.615850e-47 |
| Msa0131590 | Msa0851470 | 0.805745 | 1.150781e-49 | -8.615850e-47 |
| Msa0131590 | Msa0853120 | 0.836142 | 1.112714e-56 | -8.615850e-47 |
| Msa0131590 | Msa0858440 | 0.805856 | 1.090705e-49 | -8.615850e-47 |
| Msa0131590 | Msa0864420 | 0.820530 | 6.533881e-53 | -8.615850e-47 |
| Msa0131590 | Msa0872250 | 0.824736 | 6.865382e-54 | -8.615850e-47 |
| Msa0131590 | Msa0880450 | 0.803900 | 2.795410e-49 | -8.615850e-47 |
| Msa0131590 | Msa0943170 | 0.846361 | 2.279029e-59 | -8.615850e-47 |
| Msa0131590 | Msa0943440 | 0.811085 | 8.351075e-51 | -8.615850e-47 |
| Msa0131590 | Msa0958000 | 0.803034 | 4.227174e-49 | -8.615850e-47 |
| Msa0131590 | Msa0963020 | 0.830715 | 2.511699e-55 | -8.615850e-47 |
| Msa0131590 | Msa0980540 | 0.828373 | 9.323074e-55 | -8.615850e-47 |
| Msa0131590 | Msa0980940 | 0.801690 | 7.995234e-49 | -8.615850e-47 |
| Msa0131590 | Msa1025940 | 0.813872 | 2.054548e-51 | -8.615850e-47 |
| Msa0131590 | Msa1029070 | 0.808439 | 3.095371e-50 | -8.615850e-47 |
| Msa0131590 | Msa1037510 | 0.824566 | 7.528713e-54 | -8.615850e-47 |
| Msa0131590 | Msa1039900 | 0.834015 | 3.826498e-56 | -8.615850e-47 |
| Msa0131590 | Msa1069820 | 0.804379 | 2.222592e-49 | -8.615850e-47 |
| Msa0131590 | Msa1097820 | 0.806122 | 9.590328e-50 | -8.615850e-47 |
| Msa0131590 | Msa1123350 | 0.830332 | 3.116816e-55 | -8.615850e-47 |
| Msa0131590 | Msa1123830 | 0.809896 | 1.508209e-50 | -8.615850e-47 |
| Msa0131590 | Msa1126500 | 0.808347 | 3.237948e-50 | -8.615850e-47 |
| Msa0131590 | Msa1126830 | 0.846417 | 2.201099e-59 | -8.615850e-47 |
| Msa0131590 | Msa1127590 | 0.831676 | 1.458377e-55 | -8.615850e-47 |
| Msa0131590 | Msa1130980 | 0.838741 | 2.401194e-57 | -8.615850e-47 |
| Msa0131590 | Msa1156160 | 0.808175 | 3.524523e-50 | -8.615850e-47 |
| Msa0131590 | Msa1165780 | 0.841544 | 4.455991e-58 | -8.615850e-47 |
| Msa0131590 | Msa1165940 | 0.806963 | 6.372255e-50 | -8.615850e-47 |
| Msa0131590 | Msa1171830 | 0.800673 | 1.290505e-48 | -8.615850e-47 |
| Msa0131590 | Msa1186130 | 0.803086 | 4.121967e-49 | -8.615850e-47 |
| Msa0131590 | Msa1204830 | 0.804867 | 1.757489e-49 | -8.615850e-47 |
| Msa0131590 | Msa1206650 | 0.838249 | 3.216719e-57 | -8.615850e-47 |
| Msa0131590 | Msa1208020 | 0.826536 | 2.570878e-54 | -8.615850e-47 |
| Msa0131590 | Msa1219000 | 0.811095 | 8.311331e-51 | -8.615850e-47 |
| Msa0131590 | Msa1227460 | 0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa0131590 | Msa1227690 | 0.813806 | 2.124528e-51 | -8.615850e-47 |
| Msa0131590 | Msa1233850 | 0.806452 | 8.171314e-50 | -8.615850e-47 |
| Msa0131590 | Msa1235250 | 0.801566 | 8.475120e-49 | -8.615850e-47 |
| Msa0131590 | Msa1255370 | 0.818274 | 2.134922e-52 | -8.615850e-47 |
| Msa0131590 | Msa1270420 | 0.804094 | 2.547535e-49 | -8.615850e-47 |
| Msa0131590 | Msa1272600 | 0.813375 | 2.642580e-51 | -8.615850e-47 |
| Msa0131590 | Msa1278900 | 0.811833 | 5.743638e-51 | -8.615850e-47 |
| Msa0131590 | Msa1295910 | 0.811773 | 5.920327e-51 | -8.615850e-47 |
| Msa0131590 | Msa1331250 | 0.820022 | 8.540312e-53 | -8.615850e-47 |
| Msa0131590 | Msa1332760 | 0.818568 | 1.831215e-52 | -8.615850e-47 |
| Msa0131590 | Msa1340480 | 0.815336 | 9.740291e-52 | -8.615850e-47 |
| Msa0131590 | Msa1343290 | 0.811952 | 5.412581e-51 | -8.615850e-47 |
| Msa0131590 | Msa1346730 | 0.810592 | 1.067444e-50 | -8.615850e-47 |
| Msa0131590 | Msa1356610 | 0.813733 | 2.204708e-51 | -8.615850e-47 |
| Msa0131590 | Msa1367590 | 0.807722 | 4.398389e-50 | -8.615850e-47 |
| Msa0131590 | Msa1371520 | 0.820151 | 7.981677e-53 | -8.615850e-47 |
| Msa0131590 | Msa1376650 | 0.823546 | 1.306629e-53 | -8.615850e-47 |
| Msa0131590 | Msa1389680 | 0.815432 | 9.273581e-52 | -8.615850e-47 |
| Msa0131590 | Msa1396870 | 0.829956 | 3.851426e-55 | -8.615850e-47 |
| Msa0131590 | Msa1400820 | 0.805822 | 1.108800e-49 | -8.615850e-47 |
| Msa0131590 | Msa1411950 | 0.834563 | 2.788541e-56 | -8.615850e-47 |
| Msa0131590 | Msa1413260 | 0.827560 | 1.462326e-54 | -8.615850e-47 |
| Msa0131590 | Msa1418340 | 0.839405 | 1.615743e-57 | -8.615850e-47 |
| Msa0131590 | Msa1425670 | 0.829027 | 6.474544e-55 | -8.615850e-47 |
| Msa0131590 | Msa1432480 | 0.813144 | 2.969172e-51 | -8.615850e-47 |
| Msa0131590 | Msa1433390 | 0.800114 | 1.677438e-48 | -8.615850e-47 |
| Msa0131590 | Msa1434740 | 0.822245 | 2.626179e-53 | -8.615850e-47 |
| Msa0131590 | Msa1435770 | 0.845646 | 3.566768e-59 | -8.615850e-47 |
| Msa0131590 | Msa1437860 | 0.801290 | 9.652770e-49 | -8.615850e-47 |
| Msa0131590 | Msa1438050 | 0.808700 | 2.722907e-50 | -8.615850e-47 |
| Msa0131590 | Msa1443300 | 0.805285 | 1.436855e-49 | -8.615850e-47 |
| Msa0131590 | Msa1445940 | 0.827266 | 1.719880e-54 | -8.615850e-47 |
| Msa0131590 | Msa1458810 | 0.809136 | 2.196869e-50 | -8.615850e-47 |
| Msa0131590 | Msa1459960 | 0.805511 | 1.288810e-49 | -8.615850e-47 |
| Msa0131590 | Msa1462860 | 0.810139 | 1.336941e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131590 | MtrunA17_Chr1g0192441 | 99.221 | 385 | 3 | 0 | 1 | 385 | 1 | 385 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131590 | AT2G40650.1 | 84.783 | 184 | 28 | 0 | 1 | 184 | 1 | 184 | 1.77e-117 | 345 |
Find 131 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTATCTCTTTCCCTTGC+AGG | 0.202403 | 1_3:-62470121 | None:intergenic |
| GCATTCTATTTGCGTCTTAC+TGG | 0.216581 | 1_3:+62469024 | Msa0131590:CDS |
| TGAACTGTATGGCTTGAATT+TGG | 0.239668 | 1_3:+62472209 | Msa0131590:three_prime_UTR |
| AAAAGGAAAGGGACAGAGAT+AGG | 0.253347 | 1_3:+62471824 | Msa0131590:CDS |
| TCCTCAGCTCCATCTCTTCT+AGG | 0.306646 | 1_3:-62472048 | None:intergenic |
| TTCGATGACGATTTCTTTCT+CGG | 0.306868 | 1_3:-62468865 | None:intergenic |
| TCTATTAGTACTCTGATAAA+AGG | 0.308496 | 1_3:+62472487 | Msa0131590:three_prime_UTR |
| TGCACTTTGTCTAGGTTCTA+AGG | 0.312757 | 1_3:-62469918 | None:intergenic |
| ACATGAAGGGAGTGGGTTTC+CGG | 0.331461 | 1_3:-62468812 | None:intergenic |
| TACTGATGTGTATCATTATC+TGG | 0.333973 | 1_3:+62469053 | Msa0131590:CDS |
| CCTCGAATGCTCTTCGCTGC+TGG | 0.349121 | 1_3:-62468639 | None:intergenic |
| ATAGAGATCGGGACAGAGAT+AGG | 0.353256 | 1_3:+62471800 | Msa0131590:CDS |
| AGGCAATCAAAACAAATCTA+TGG | 0.355758 | 1_3:-62472401 | None:intergenic |
| CTGTTTGCTTCTGCAATCTC+TGG | 0.359328 | 1_3:-62472144 | None:intergenic |
| CCCTATCTCTTTCCCTTGCA+GGG | 0.370664 | 1_3:-62470120 | None:intergenic |
| AGATCTATCAGCACACATAT+TGG | 0.372870 | 1_3:+62468703 | Msa0131590:CDS |
| GAAGGAAAAGAAAGAAAAGA+AGG | 0.374717 | 1_3:+62472089 | Msa0131590:CDS |
| GCTTCTGCAATCTCTGGATC+TGG | 0.377528 | 1_3:-62472138 | None:intergenic |
| TGAGGAGGAAGAGGAGAATG+AGG | 0.386800 | 1_3:+62469955 | Msa0131590:CDS |
| GCCCTGCAAGGGAAAGAGAT+AGG | 0.391241 | 1_3:+62470119 | Msa0131590:CDS |
| GAAAGAAAAGAAGGAAAAGA+AGG | 0.397502 | 1_3:+62472098 | Msa0131590:CDS |
| ATGCAGGTATGTGAGGATAC+TGG | 0.405268 | 1_3:+62468999 | Msa0131590:intron |
| TGAATTGACAATTGCCGCTC+AGG | 0.407360 | 1_3:-62472311 | None:intergenic |
| TTTCTTCCCTCAGACGATAT+CGG | 0.414737 | 1_3:-62471861 | None:intergenic |
| CTGAGGGAAGAAAAGGATTA+TGG | 0.415767 | 1_3:+62471871 | Msa0131590:CDS |
| AGCCGTTGTATAATGATTAT+AGG | 0.416127 | 1_3:+62469076 | Msa0131590:CDS |
| GATTTGTATGATATAGATAA+AGG | 0.418036 | 1_3:-62472421 | None:intergenic |
| GCTCCATGGCTTTGTCGACT+AGG | 0.420325 | 1_3:-62468758 | None:intergenic |
| GACCACCTCGGCGGCACTTA+CGG | 0.427204 | 1_3:+62468783 | Msa0131590:CDS |
| AGAGTGTTCAATTGATGTAA+TGG | 0.429494 | 1_3:+62472458 | Msa0131590:three_prime_UTR |
| AAAGGAAAGGGACAGAGATA+GGG | 0.437635 | 1_3:+62471825 | Msa0131590:CDS |
| TCTTCAAGTGCACTTTGTCT+AGG | 0.438667 | 1_3:-62469926 | None:intergenic |
| GGTTGTGAATCGTGATGAAT+TGG | 0.439341 | 1_3:-62468598 | None:intergenic |
| CAGAGATTGCAGAAGCAAAC+AGG | 0.439672 | 1_3:+62472145 | Msa0131590:CDS |
| GCGGCACTTACGGTGGCAAC+CGG | 0.442983 | 1_3:+62468793 | Msa0131590:CDS |
| AAACAGGATACGAGCATCAC+TGG | 0.445067 | 1_3:+62472161 | Msa0131590:CDS |
| CTCCATGGCTTTGTCGACTA+GGG | 0.448233 | 1_3:-62468757 | None:intergenic |
| GCGGCAATTGTCAATTCAAC+AGG | 0.451593 | 1_3:+62472316 | Msa0131590:three_prime_UTR |
| CTCAATAACTTACGTCCATC+CGG | 0.452000 | 1_3:-62469117 | None:intergenic |
| AGAAAGGAAAGCACCTTCTC+AGG | 0.452898 | 1_3:-62470001 | None:intergenic |
| ACCTTCTCAGGCTCCTCAGC+AGG | 0.454985 | 1_3:-62469989 | None:intergenic |
| AGTTCAGATCACATCTTAAG+TGG | 0.458888 | 1_3:-62472192 | None:intergenic |
| AGGTGGACTCTTGAATCTCT+TGG | 0.461088 | 1_3:+62469893 | Msa0131590:intron |
| GAAACTGCGGAGGAAATTAC+CGG | 0.470423 | 1_3:+62469098 | Msa0131590:CDS |
| AGAACAATGCTTCGGCTTAA+CGG | 0.471701 | 1_3:+62468728 | Msa0131590:CDS |
| CCAGCAGCGAAGAGCATTCG+AGG | 0.474837 | 1_3:+62468639 | Msa0131590:CDS |
| CTCTGTCCCGATCTCTATCT+CGG | 0.475661 | 1_3:-62471795 | None:intergenic |
| TGTATGGCTTGAATTTGGAC+TGG | 0.487500 | 1_3:+62472214 | Msa0131590:three_prime_UTR |
| CAAGGAGTCGAAGTAGAAGC+AGG | 0.498926 | 1_3:+62471965 | Msa0131590:CDS |
| TCGATGACGATTTCTTTCTC+GGG | 0.499616 | 1_3:-62468864 | None:intergenic |
| GAGAAGGCAGGGAGCGCGAG+AGG | 0.505596 | 1_3:+62471902 | Msa0131590:CDS |
| CTATGCCGCGTATTAAGAAA+AGG | 0.508860 | 1_3:+62469299 | Msa0131590:CDS |
| ATCGTGACCGTGGTAGGAGG+AGG | 0.511017 | 1_3:+62471935 | Msa0131590:CDS |
| ATATCGTCTGAGGGAAGAAA+AGG | 0.514906 | 1_3:+62471864 | Msa0131590:CDS |
| AACACTCTAGTTGTCAGTAC+AGG | 0.516645 | 1_3:-62472443 | None:intergenic |
| AAAGGGACAGAGATAGGGAG+AGG | 0.519341 | 1_3:+62471830 | Msa0131590:CDS |
| CAGAGATAGGGAAAAGGAAA+GGG | 0.522303 | 1_3:+62471813 | Msa0131590:CDS |
| TAGAGATCGGGACAGAGATA+GGG | 0.522697 | 1_3:+62471801 | Msa0131590:CDS |
| AGCGTAAGTCCTAGAAGAGA+TGG | 0.522785 | 1_3:+62472039 | Msa0131590:CDS |
| GCCGAGGTGGTCGAGCTCCA+TGG | 0.522793 | 1_3:-62468772 | None:intergenic |
| TATTGGAAAGAACAATGCTT+CGG | 0.527020 | 1_3:+62468720 | Msa0131590:CDS |
| AGAAGGAAAAGAAGGATGAC+GGG | 0.527671 | 1_3:+62472106 | Msa0131590:CDS |
| TGTAGGTGCAGCGGTATGCT+TGG | 0.533282 | 1_3:+62472367 | Msa0131590:three_prime_UTR |
| TGCAGGTATGTGAGGATACT+GGG | 0.544095 | 1_3:+62469000 | Msa0131590:intron |
| CACCGTAAGTGCCGCCGAGG+TGG | 0.544664 | 1_3:-62468785 | None:intergenic |
| CACTGCTCTTGCGATATGAA+TGG | 0.549939 | 1_3:+62472528 | Msa0131590:three_prime_UTR |
| TAGACAAAGTGCACTTGAAG+AGG | 0.550517 | 1_3:+62469928 | Msa0131590:CDS |
| CCCTGCAAGGGAAAGAGATA+GGG | 0.555278 | 1_3:+62470120 | Msa0131590:CDS |
| GTATGGCTTGAATTTGGACT+GGG | 0.555839 | 1_3:+62472215 | Msa0131590:three_prime_UTR |
| ATGGTCGTGAGAGAGAAGGC+AGG | 0.557251 | 1_3:+62471890 | Msa0131590:CDS |
| TATGACAGAGAGCGTGGACG+TGG | 0.558775 | 1_3:+62471772 | Msa0131590:CDS |
| TCCTAGAAGAGATGGAGCTG+AGG | 0.561364 | 1_3:+62472047 | Msa0131590:CDS |
| TCGGGACAGAGATAGGGAAA+AGG | 0.563174 | 1_3:+62471807 | Msa0131590:CDS |
| GCCTGCTGAGGAGCCTGAGA+AGG | 0.563693 | 1_3:+62469988 | Msa0131590:CDS |
| GACGAGGCACATGAAGGGAG+TGG | 0.564286 | 1_3:-62468820 | None:intergenic |
| AAGAAGGAAAAGAAGGATGA+CGG | 0.567699 | 1_3:+62472105 | Msa0131590:CDS |
| GACGTGGCCGAGATAGAGAT+CGG | 0.570627 | 1_3:+62471788 | Msa0131590:CDS |
| GATCGCAAGGAACATGATGG+TGG | 0.570891 | 1_3:+62471988 | Msa0131590:CDS |
| AATCGTGATGAATTGGATGA+TGG | 0.573412 | 1_3:-62468591 | None:intergenic |
| ATCGCAAGGAACATGATGGT+GGG | 0.574370 | 1_3:+62471989 | Msa0131590:CDS |
| ACAGAGATAGGGAAAAGGAA+AGG | 0.577809 | 1_3:+62471812 | Msa0131590:CDS |
| AACCCTAGTCGACAAAGCCA+TGG | 0.577816 | 1_3:+62468755 | Msa0131590:CDS |
| ACAGAGATCGTGACCGTGGT+AGG | 0.578698 | 1_3:+62471929 | Msa0131590:CDS |
| TGGATCAGTGCGATTTGCCA+TGG | 0.579045 | 1_3:-62468619 | None:intergenic |
| CTGCAATCTCTGGATCTGGA+TGG | 0.579331 | 1_3:-62472134 | None:intergenic |
| TGGTGAGCCAAAGAAGAAGA+AGG | 0.579870 | 1_3:+62472071 | Msa0131590:CDS |
| AGTAGCTCCTCCTCCTACCA+CGG | 0.582815 | 1_3:-62471942 | None:intergenic |
| AGAAGAGATGGAGCTGAGGA+TGG | 0.583701 | 1_3:+62472051 | Msa0131590:CDS |
| ATCGTGGGCGAAGCCCTGCA+AGG | 0.584499 | 1_3:+62470107 | Msa0131590:CDS |
| AAGTAGAAGCAGGGATCGCA+AGG | 0.585476 | 1_3:+62471975 | Msa0131590:CDS |
| TTTCATGACGAGGCACATGA+AGG | 0.588448 | 1_3:-62468826 | None:intergenic |
| GGCAATAGCATGTTACCTCA+AGG | 0.590742 | 1_3:+62472251 | Msa0131590:three_prime_UTR |
| AATCTCTGGATCTGGATGGT+CGG | 0.593545 | 1_3:-62472130 | None:intergenic |
| ACGTGGCCGAGATAGAGATC+GGG | 0.596361 | 1_3:+62471789 | Msa0131590:CDS |
| GTTTATAGGATTATCATCGT+GGG | 0.596566 | 1_3:+62470092 | Msa0131590:intron |
| ACAGAGACCGATATCGTCTG+AGG | 0.596802 | 1_3:+62471854 | Msa0131590:CDS |
| ACGAGGCACATGAAGGGAGT+GGG | 0.599318 | 1_3:-62468819 | None:intergenic |
| GAATTGACAATTGCCGCTCA+GGG | 0.600465 | 1_3:-62472310 | None:intergenic |
| GAGATCGTGACCGTGGTAGG+AGG | 0.602297 | 1_3:+62471932 | Msa0131590:CDS |
| TCGTGGGCGAAGCCCTGCAA+GGG | 0.603091 | 1_3:+62470108 | Msa0131590:CDS |
| TGGTCGTGAGAGAGAAGGCA+GGG | 0.605694 | 1_3:+62471891 | Msa0131590:CDS |
| TTCATGACGAGGCACATGAA+GGG | 0.606717 | 1_3:-62468825 | None:intergenic |
| TGCTTTGACACATGTTGATG+AGG | 0.607496 | 1_3:+62469234 | Msa0131590:CDS |
| GATTATGGTCGTGAGAGAGA+AGG | 0.609683 | 1_3:+62471886 | Msa0131590:CDS |
| GTAGGAGGAGGAGCTACTCA+AGG | 0.610437 | 1_3:+62471947 | Msa0131590:CDS |
| AAGGGACAGAGATAGGGAGA+GGG | 0.613155 | 1_3:+62471831 | Msa0131590:CDS |
| GGTTTATAGGATTATCATCG+TGG | 0.614925 | 1_3:+62470091 | Msa0131590:intron |
| AACAGGATACGAGCATCACT+GGG | 0.622392 | 1_3:+62472162 | Msa0131590:CDS |
| AAGATGTGATCTGAACTGTA+TGG | 0.623132 | 1_3:+62472198 | Msa0131590:exon |
| AGAGATTATGACAGAGAGCG+TGG | 0.623322 | 1_3:+62471766 | Msa0131590:CDS |
| TTCCTATAATCATTATACAA+CGG | 0.623715 | 1_3:-62469078 | None:intergenic |
| AAGGAGTCGAAGTAGAAGCA+GGG | 0.630233 | 1_3:+62471966 | Msa0131590:CDS |
| AGGGATCGCAAGGAACATGA+TGG | 0.633153 | 1_3:+62471985 | Msa0131590:CDS |
| TGCCACCGTAAGTGCCGCCG+AGG | 0.634024 | 1_3:-62468788 | None:intergenic |
| CACCTCGGCGGCACTTACGG+TGG | 0.637349 | 1_3:+62468786 | Msa0131590:CDS |
| AGAGACAGAGATCGTGACCG+TGG | 0.637818 | 1_3:+62471925 | Msa0131590:CDS |
| CAGAGACCGATATCGTCTGA+GGG | 0.649302 | 1_3:+62471855 | Msa0131590:CDS |
| GGATAATGAACAGCCTGCTG+AGG | 0.651475 | 1_3:+62469976 | Msa0131590:CDS |
| TTCATCACGATTCACAACCA+TGG | 0.652686 | 1_3:+62468602 | Msa0131590:exon |
| ATGTACTTGTGTAGGTGCAG+CGG | 0.660123 | 1_3:+62472358 | Msa0131590:three_prime_UTR |
| GGACTGGGTTACAAAAGACA+AGG | 0.668930 | 1_3:+62472230 | Msa0131590:three_prime_UTR |
| ATACAAGTATGTACTTGTGT+AGG | 0.675592 | 1_3:+62472350 | Msa0131590:three_prime_UTR |
| GACGTGATAGTCATAGACAC+AGG | 0.680693 | 1_3:+62470149 | Msa0131590:CDS |
| TCGCAAGGAACATGATGGTG+GGG | 0.683038 | 1_3:+62471990 | Msa0131590:CDS |
| CTGCGGAGGAAATTACCGGA+TGG | 0.688234 | 1_3:+62469102 | Msa0131590:CDS |
| GCCATGGAGCTCGACCACCT+CGG | 0.691184 | 1_3:+62468771 | Msa0131590:CDS |
| ATGATTATAGGAAACTGCGG+AGG | 0.698822 | 1_3:+62469088 | Msa0131590:CDS |
| GTCAAACGTCACAAACCTTG+AGG | 0.710882 | 1_3:-62472266 | None:intergenic |
| TGTGCTGATAGATCTTTGAA+CGG | 0.719231 | 1_3:-62468695 | None:intergenic |
| ATAATGATTATAGGAAACTG+CGG | 0.722366 | 1_3:+62469085 | Msa0131590:CDS |
| ATGGAGCTCGACCACCTCGG+CGG | 0.724394 | 1_3:+62468774 | Msa0131590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAAGAAACATATATT+TGG | - | chr1_3:62471526-62471545 | None:intergenic | 10.0% |
| !!! | TAATATTTTTTGAAAAATGC+AGG | + | chr1_3:62468983-62469002 | Msa0131590:intron | 15.0% |
| !! | AATCCAAATCTTATATAAAT+AGG | - | chr1_3:62470570-62470589 | None:intergenic | 15.0% |
| !! | TTCCTTTATTAAATAAATGT+TGG | + | chr1_3:62470590-62470609 | Msa0131590:intron | 15.0% |
| !! | ATCCAACATTTATTTAATAA+AGG | - | chr1_3:62470595-62470614 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTGATTTATAGA+TGG | + | chr1_3:62471319-62471338 | Msa0131590:intron | 15.0% |
| !! | TTCCTATAATCATTATACAA+CGG | - | chr1_3:62469081-62469100 | None:intergenic | 20.0% |
| !!! | TCTACTATCTTTTATACTAT+AGG | - | chr1_3:62469425-62469444 | None:intergenic | 20.0% |
| !!! | TTTACAGTTTCATATTTTTG+TGG | + | chr1_3:62469834-62469853 | Msa0131590:intron | 20.0% |
| !!! | ACTTCTTTTTATTTGCTTTT+TGG | + | chr1_3:62470257-62470276 | Msa0131590:intron | 20.0% |
| !!! | CTTCTTTTTATTTGCTTTTT+GGG | + | chr1_3:62470258-62470277 | Msa0131590:intron | 20.0% |
| !! | GATCCTATTTATATAAGATT+TGG | + | chr1_3:62470564-62470583 | Msa0131590:intron | 20.0% |
| !!! | ATTGCCTATTTTTTTTAATC+TGG | + | chr1_3:62470621-62470640 | Msa0131590:intron | 20.0% |
| !!! | TTGCCTATTTTTTTTAATCT+GGG | + | chr1_3:62470622-62470641 | Msa0131590:intron | 20.0% |
| !! | AAAATTAATAATTCTCCACT+TGG | + | chr1_3:62470648-62470667 | Msa0131590:intron | 20.0% |
| !! | ATCCTGTATTTCATAAAAAT+TGG | + | chr1_3:62470888-62470907 | Msa0131590:intron | 20.0% |
| !! | TCCTGTATTTCATAAAAATT+GGG | + | chr1_3:62470889-62470908 | Msa0131590:intron | 20.0% |
| !!! | AGTTTTTAGTTTTTTGTTAG+AGG | + | chr1_3:62471190-62471209 | Msa0131590:intron | 20.0% |
| !! | TTAAAGTGACATGAAATAAT+TGG | - | chr1_3:62471235-62471254 | None:intergenic | 20.0% |
| !! | ATGATAACATCAATGATAAA+AGG | - | chr1_3:62471345-62471364 | None:intergenic | 20.0% |
| !! | TAAAAGAAACATATATTTGG+CGG | - | chr1_3:62471523-62471542 | None:intergenic | 20.0% |
| !!! | TCATTAGTGATAAATTTTGT+TGG | + | chr1_3:62471672-62471691 | Msa0131590:intron | 20.0% |
| !!! | TTACTAAACTTTTGCTTTTT+TGG | + | chr1_3:62471701-62471720 | Msa0131590:intron | 20.0% |
| !! | GATTTGTATGATATAGATAA+AGG | - | chr1_3:62472424-62472443 | None:intergenic | 20.0% |
| !!! | TTTTTTCAACAAGGTTTTGA+GGG | - | chr1_3:62468671-62468690 | None:intergenic | 25.0% |
| !!! | ATTTTTTCAACAAGGTTTTG+AGG | - | chr1_3:62468672-62468691 | None:intergenic | 25.0% |
| ! | AAAATCCGAAACTAAAAAGA+GGG | - | chr1_3:62468921-62468940 | None:intergenic | 25.0% |
| ! | ATAATGATTATAGGAAACTG+CGG | + | chr1_3:62469085-62469104 | Msa0131590:CDS | 25.0% |
| !! | TAATACCTTTTCTTAATACG+CGG | - | chr1_3:62469307-62469326 | None:intergenic | 25.0% |
| !!! | GTTCTTTCTTTTTTCTCTAT+TGG | + | chr1_3:62469342-62469361 | Msa0131590:intron | 25.0% |
| !!! | TTGTCTTTTGTTTTCTTTGT+AGG | + | chr1_3:62469727-62469746 | Msa0131590:intron | 25.0% |
| ! | ACTGTAAACTAATCATACAA+GGG | - | chr1_3:62469822-62469841 | None:intergenic | 25.0% |
| ! | AACTGTAAACTAATCATACA+AGG | - | chr1_3:62469823-62469842 | None:intergenic | 25.0% |
| !!! | TTTTGTCATTTGTTTTTTGC+AGG | + | chr1_3:62469873-62469892 | Msa0131590:intron | 25.0% |
| !! | AAAAGTACATTGCTTAAGAA+AGG | - | chr1_3:62470020-62470039 | None:intergenic | 25.0% |
| ! | TTGATTGTTGAATGGTTTAT+AGG | + | chr1_3:62470078-62470097 | Msa0131590:intron | 25.0% |
| ! | TAAATAGGATCATGATAACA+GGG | - | chr1_3:62470555-62470574 | None:intergenic | 25.0% |
| ! | ATAAATAGGATCATGATAAC+AGG | - | chr1_3:62470556-62470575 | None:intergenic | 25.0% |
| !!! | TGCCTATTTTTTTTAATCTG+GGG | + | chr1_3:62470623-62470642 | Msa0131590:intron | 25.0% |
| ! | AACCCCAGATTAAAAAAAAT+AGG | - | chr1_3:62470628-62470647 | None:intergenic | 25.0% |
| !!! | TGTTTCCTTTTTTAAAGCTT+CGG | - | chr1_3:62470791-62470810 | None:intergenic | 25.0% |
| ! | CCTGTATTTCATAAAAATTG+GGG | + | chr1_3:62470890-62470909 | Msa0131590:intron | 25.0% |
| ! | CTGTATTTCATAAAAATTGG+GGG | + | chr1_3:62470891-62470910 | Msa0131590:intron | 25.0% |
| ! | TGTATTTCATAAAAATTGGG+GGG | + | chr1_3:62470892-62470911 | Msa0131590:intron | 25.0% |
| ! | ATTAAAATACGTTTCAGAAG+TGG | + | chr1_3:62470960-62470979 | Msa0131590:intron | 25.0% |
| !!! | AAGTTCAGATTTTCAAGAAA+GGG | - | chr1_3:62471024-62471043 | None:intergenic | 25.0% |
| !!! | AAAGTTCAGATTTTCAAGAA+AGG | - | chr1_3:62471025-62471044 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTATAACTGTTCA+AGG | - | chr1_3:62471095-62471114 | None:intergenic | 25.0% |
| ! | TACTAACATGCTGATATAAA+GGG | - | chr1_3:62471126-62471145 | None:intergenic | 25.0% |
| ! | TATCTCAGTTACATATTTGA+CGG | - | chr1_3:62471156-62471175 | None:intergenic | 25.0% |
| ! | CATTTAACTCAAAAAAACCA+CGG | - | chr1_3:62471643-62471662 | None:intergenic | 25.0% |
| ! | TCTATTAGTACTCTGATAAA+AGG | + | chr1_3:62472487-62472506 | Msa0131590:three_prime_UTR | 25.0% |
| !!! | AACGGAGAATTTTTTCAACA+AGG | - | chr1_3:62468680-62468699 | None:intergenic | 30.0% |
| TATTGGAAAGAACAATGCTT+CGG | + | chr1_3:62468720-62468739 | Msa0131590:CDS | 30.0% | |
| !!! | AATTCCCCTCTTTTTAGTTT+CGG | + | chr1_3:62468913-62468932 | Msa0131590:intron | 30.0% |
| AAATCCGAAACTAAAAAGAG+GGG | - | chr1_3:62468920-62468939 | None:intergenic | 30.0% | |
| GAAAATCCGAAACTAAAAAG+AGG | - | chr1_3:62468922-62468941 | None:intergenic | 30.0% | |
| ! | TTAGTTTCGGATTTTCATTC+TGG | + | chr1_3:62468926-62468945 | Msa0131590:intron | 30.0% |
| ! | TAGTTTCGGATTTTCATTCT+GGG | + | chr1_3:62468927-62468946 | Msa0131590:intron | 30.0% |
| TACTGATGTGTATCATTATC+TGG | + | chr1_3:62469053-62469072 | Msa0131590:CDS | 30.0% | |
| AGCCGTTGTATAATGATTAT+AGG | + | chr1_3:62469076-62469095 | Msa0131590:CDS | 30.0% | |
| !! | GTTTAGTTATTTTGCTTGCT+CGG | + | chr1_3:62469368-62469387 | Msa0131590:intron | 30.0% |
| AACAACATTAGATAGAGAGT+TGG | + | chr1_3:62469392-62469411 | Msa0131590:intron | 30.0% | |
| ACAACATTAGATAGAGAGTT+GGG | + | chr1_3:62469393-62469412 | Msa0131590:intron | 30.0% | |
| GTTTCGCTAATAGTATTTCT+AGG | - | chr1_3:62469554-62469573 | None:intergenic | 30.0% | |
| ! | TGGTTTTTGATAGAAGACTA+TGG | + | chr1_3:62469614-62469633 | Msa0131590:intron | 30.0% |
| !! | TTTGTAGGATTTTGAGTAGT+AGG | + | chr1_3:62469742-62469761 | Msa0131590:intron | 30.0% |
| GTTTATAGGATTATCATCGT+GGG | + | chr1_3:62470092-62470111 | Msa0131590:intron | 30.0% | |
| AGGATAGCTATTTAAATGAC+GGG | - | chr1_3:62470234-62470253 | None:intergenic | 30.0% | |
| CAGGATAGCTATTTAAATGA+CGG | - | chr1_3:62470235-62470254 | None:intergenic | 30.0% | |
| !! | AGCAAATAAAAAGAAGTACC+AGG | - | chr1_3:62470254-62470273 | None:intergenic | 30.0% |
| TTATACATCTATTTCCACTG+CGG | + | chr1_3:62470396-62470415 | Msa0131590:intron | 30.0% | |
| GGATCATTGAACTTTACTAT+AGG | - | chr1_3:62470454-62470473 | None:intergenic | 30.0% | |
| ATCAAACAGTTATGTTGCAT+TGG | + | chr1_3:62470521-62470540 | Msa0131590:intron | 30.0% | |
| ATAGTCATAATTCAACCAAG+TGG | - | chr1_3:62470666-62470685 | None:intergenic | 30.0% | |
| TATGACTATTGAACATCCAT+TGG | + | chr1_3:62470677-62470696 | Msa0131590:intron | 30.0% | |
| CATCAAATTAAACTCTCCAA+TGG | - | chr1_3:62470696-62470715 | None:intergenic | 30.0% | |
| !! | TTCTTCCGAAGCTTTAAAAA+AGG | + | chr1_3:62470783-62470802 | Msa0131590:intron | 30.0% |
| ! | CCCCAATTTTTATGAAATAC+AGG | - | chr1_3:62470893-62470912 | None:intergenic | 30.0% |
| GTATTTCATAAAAATTGGGG+GGG | + | chr1_3:62470893-62470912 | Msa0131590:intron | 30.0% | |
| !!! | GTATTTTAATGCCCAAAAGT+TGG | - | chr1_3:62470950-62470969 | None:intergenic | 30.0% |
| GTACTAACATGCTGATATAA+AGG | - | chr1_3:62471127-62471146 | None:intergenic | 30.0% | |
| ! | AATTTCTCTCCTTGTGATTT+TGG | + | chr1_3:62471425-62471444 | Msa0131590:intron | 30.0% |
| !!! | CGTGGTTTTTTTGAGTTAAA+TGG | + | chr1_3:62471641-62471660 | Msa0131590:intron | 30.0% |
| !!! | TTTTTTGGTGTCCTTTTCAT+AGG | + | chr1_3:62471716-62471735 | Msa0131590:intron | 30.0% |
| !!! | TTTTTGGTGTCCTTTTCATA+GGG | + | chr1_3:62471717-62471736 | Msa0131590:intron | 30.0% |
| ! | TTCTTTTCCTTCTTCTTCTT+TGG | - | chr1_3:62472081-62472100 | None:intergenic | 30.0% |
| GAAGGAAAAGAAAGAAAAGA+AGG | + | chr1_3:62472089-62472108 | Msa0131590:CDS | 30.0% | |
| GAAAGAAAAGAAGGAAAAGA+AGG | + | chr1_3:62472098-62472117 | Msa0131590:CDS | 30.0% | |
| ATACAAGTATGTACTTGTGT+AGG | + | chr1_3:62472350-62472369 | Msa0131590:three_prime_UTR | 30.0% | |
| AGGCAATCAAAACAAATCTA+TGG | - | chr1_3:62472404-62472423 | None:intergenic | 30.0% | |
| ! | AGAGTGTTCAATTGATGTAA+TGG | + | chr1_3:62472458-62472477 | Msa0131590:three_prime_UTR | 30.0% |
| AAAGGAAAAGAAAAACGTTG+TGG | + | chr1_3:62472505-62472524 | Msa0131590:three_prime_UTR | 30.0% | |
| !!! | AAAACTACATCGTTTTGGAG+AGG | + | chr1_3:62468545-62468564 | Msa0131590:five_prime_UTR | 35.0% |
| AATCGTGATGAATTGGATGA+TGG | - | chr1_3:62468594-62468613 | None:intergenic | 35.0% | |
| ! | TGTGCTGATAGATCTTTGAA+CGG | - | chr1_3:62468698-62468717 | None:intergenic | 35.0% |
| AGATCTATCAGCACACATAT+TGG | + | chr1_3:62468703-62468722 | Msa0131590:CDS | 35.0% | |
| TTCGATGACGATTTCTTTCT+CGG | - | chr1_3:62468868-62468887 | None:intergenic | 35.0% | |
| TTGAAAAATGCAGGTATGTG+AGG | + | chr1_3:62468992-62469011 | Msa0131590:intron | 35.0% | |
| CAACATTAGATAGAGAGTTG+GGG | + | chr1_3:62469394-62469413 | Msa0131590:intron | 35.0% | |
| TAGTAGAAACTAGACTTCAG+TGG | + | chr1_3:62469438-62469457 | Msa0131590:intron | 35.0% | |
| AAACTAGACTTCAGTGGTTT+GGG | + | chr1_3:62469444-62469463 | Msa0131590:intron | 35.0% | |
| AGATCTAGAGATCAATGAGT+TGG | + | chr1_3:62469582-62469601 | Msa0131590:intron | 35.0% | |
| GTAAACTAATCATACAAGGG+AGG | - | chr1_3:62469819-62469838 | None:intergenic | 35.0% | |
| !!! | TGTCATTTGTTTTTTGCAGG+TGG | + | chr1_3:62469876-62469895 | Msa0131590:intron | 35.0% |
| TGAATGTGATTCTGATGTTC+TGG | + | chr1_3:62470054-62470073 | Msa0131590:intron | 35.0% | |
| !! | GTTCTGGTTTGATTGTTGAA+TGG | + | chr1_3:62470070-62470089 | Msa0131590:intron | 35.0% |
| GGTTTATAGGATTATCATCG+TGG | + | chr1_3:62470091-62470110 | Msa0131590:intron | 35.0% | |
| GAAGTAACAGCACATTTACA+AGG | - | chr1_3:62470187-62470206 | None:intergenic | 35.0% | |
| CGTCATTTAAATAGCTATCC+TGG | + | chr1_3:62470233-62470252 | Msa0131590:intron | 35.0% | |
| ! | TTGTGCATGAGTGTATCTTT+TGG | + | chr1_3:62470296-62470315 | Msa0131590:intron | 35.0% |
| ! | TGTGCATGAGTGTATCTTTT+GGG | + | chr1_3:62470297-62470316 | Msa0131590:intron | 35.0% |
| !! | TGTATCTTTTGGGTCTATGT+TGG | + | chr1_3:62470307-62470326 | Msa0131590:intron | 35.0% |
| ! | TATCTTAAGTTGTCGAAGTG+CGG | + | chr1_3:62470832-62470851 | Msa0131590:intron | 35.0% |
| GCGATATTATCTTTATGCGA+AGG | + | chr1_3:62470915-62470934 | Msa0131590:intron | 35.0% | |
| TTAATGCCCAAAAGTTGGAT+AGG | - | chr1_3:62470945-62470964 | None:intergenic | 35.0% | |
| GAGATTCCTAGCATATCATA+AGG | + | chr1_3:62470996-62471015 | Msa0131590:intron | 35.0% | |
| ! | CACAAGAGTGTGAAAAACAT+AGG | + | chr1_3:62471045-62471064 | Msa0131590:intron | 35.0% |
| !!! | GTTTTTTGTTAGAGGCATTG+TGG | + | chr1_3:62471198-62471217 | Msa0131590:intron | 35.0% |
| CATGCACACATACATCTAAA+TGG | + | chr1_3:62471266-62471285 | Msa0131590:intron | 35.0% | |
| CATCTAAATGGTGGTAAAGT+TGG | + | chr1_3:62471278-62471297 | Msa0131590:intron | 35.0% | |
| ! | GATTTGCTCTTCGTAGTATA+AGG | - | chr1_3:62471463-62471482 | None:intergenic | 35.0% |
| CATATATTTGGCGGAAATCA+CGG | - | chr1_3:62471514-62471533 | None:intergenic | 35.0% | |
| TGTGATATAGCATCACTGTT+TGG | + | chr1_3:62471610-62471629 | Msa0131590:intron | 35.0% | |
| AAGAAGGAAAAGAAGGATGA+CGG | + | chr1_3:62472105-62472124 | Msa0131590:CDS | 35.0% | |
| AGTTCAGATCACATCTTAAG+TGG | - | chr1_3:62472195-62472214 | None:intergenic | 35.0% | |
| AAGATGTGATCTGAACTGTA+TGG | + | chr1_3:62472198-62472217 | Msa0131590:exon | 35.0% | |
| TGAACTGTATGGCTTGAATT+TGG | + | chr1_3:62472209-62472228 | Msa0131590:three_prime_UTR | 35.0% | |
| !!! | ACATCGTTTTGGAGAGGATT+AGG | + | chr1_3:62468551-62468570 | Msa0131590:five_prime_UTR | 40.0% |
| !!! | CATCGTTTTGGAGAGGATTA+GGG | + | chr1_3:62468552-62468571 | Msa0131590:five_prime_UTR | 40.0% |
| GGTTGTGAATCGTGATGAAT+TGG | - | chr1_3:62468601-62468620 | None:intergenic | 40.0% | |
| TTCATCACGATTCACAACCA+TGG | + | chr1_3:62468602-62468621 | Msa0131590:exon | 40.0% | |
| AGAACAATGCTTCGGCTTAA+CGG | + | chr1_3:62468728-62468747 | Msa0131590:CDS | 40.0% | |
| !! | TCTGAAGCATTTTCATGACG+AGG | - | chr1_3:62468839-62468858 | None:intergenic | 40.0% |
| TCGATGACGATTTCTTTCTC+GGG | - | chr1_3:62468867-62468886 | None:intergenic | 40.0% | |
| GCATTCTATTTGCGTCTTAC+TGG | + | chr1_3:62469024-62469043 | Msa0131590:CDS | 40.0% | |
| ATGATTATAGGAAACTGCGG+AGG | + | chr1_3:62469088-62469107 | Msa0131590:CDS | 40.0% | |
| CTCAATAACTTACGTCCATC+CGG | - | chr1_3:62469120-62469139 | None:intergenic | 40.0% | |
| TGCTTTGACACATGTTGATG+AGG | + | chr1_3:62469234-62469253 | Msa0131590:CDS | 40.0% | |
| CTATGCCGCGTATTAAGAAA+AGG | + | chr1_3:62469299-62469318 | Msa0131590:CDS | 40.0% | |
| GAAACTAGACTTCAGTGGTT+TGG | + | chr1_3:62469443-62469462 | Msa0131590:intron | 40.0% | |
| GCATGTAGAGAGAAAACTTG+TGG | + | chr1_3:62469466-62469485 | Msa0131590:intron | 40.0% | |
| GGTAAGGAGAGTAAATCAGA+TGG | + | chr1_3:62469496-62469515 | Msa0131590:intron | 40.0% | |
| AAGGAGAGTAAATCAGATGG+AGG | + | chr1_3:62469499-62469518 | Msa0131590:intron | 40.0% | |
| AGGAGAGTAAATCAGATGGA+GGG | + | chr1_3:62469500-62469519 | Msa0131590:intron | 40.0% | |
| ! | CAATGAGTTGGAGAAACACA+TGG | + | chr1_3:62469594-62469613 | Msa0131590:intron | 40.0% |
| ! | GGATAAGGCTTGGTTATTGT+CGG | + | chr1_3:62469672-62469691 | Msa0131590:intron | 40.0% |
| TACTCTGTGCTTTGCATGAT+AGG | + | chr1_3:62469699-62469718 | Msa0131590:intron | 40.0% | |
| !! | AGGATTTTGAGTAGTAGGTG+AGG | + | chr1_3:62469747-62469766 | Msa0131590:intron | 40.0% |
| AGGATAGAGAAGCAAGACAA+AGG | - | chr1_3:62469799-62469818 | None:intergenic | 40.0% | |
| TGCACTTTGTCTAGGTTCTA+AGG | - | chr1_3:62469921-62469940 | None:intergenic | 40.0% | |
| TCTTCAAGTGCACTTTGTCT+AGG | - | chr1_3:62469929-62469948 | None:intergenic | 40.0% | |
| TAGACAAAGTGCACTTGAAG+AGG | + | chr1_3:62469928-62469947 | Msa0131590:CDS | 40.0% | |
| ! | TGCACTTGAAGAGGATTTTG+AGG | + | chr1_3:62469937-62469956 | Msa0131590:CDS | 40.0% |
| !! | ACTTGAAGAGGATTTTGAGG+AGG | + | chr1_3:62469940-62469959 | Msa0131590:CDS | 40.0% |
| AAGCAGTTGTATACCGCAAA+TGG | - | chr1_3:62470431-62470450 | None:intergenic | 40.0% | |
| TAAAGTTCAATGATCCTGCC+AGG | + | chr1_3:62470458-62470477 | Msa0131590:intron | 40.0% | |
| ! | TGTGCAGTTGAGAAGTATGA+TGG | + | chr1_3:62470498-62470517 | Msa0131590:intron | 40.0% |
| AGGGAACCTTATGATATGCT+AGG | - | chr1_3:62471005-62471024 | None:intergenic | 40.0% | |
| ATAACTGTTCAAGGACTGCA+GGG | - | chr1_3:62471086-62471105 | None:intergenic | 40.0% | |
| TATAACTGTTCAAGGACTGC+AGG | - | chr1_3:62471087-62471106 | None:intergenic | 40.0% | |
| !!! | TTTTGTTAGAGGCATTGTGG+TGG | + | chr1_3:62471201-62471220 | Msa0131590:intron | 40.0% |
| GCACACATACATCTAAATGG+TGG | + | chr1_3:62471269-62471288 | Msa0131590:intron | 40.0% | |
| ! | TCTCCTTGTGATTTTGGATG+AGG | + | chr1_3:62471431-62471450 | Msa0131590:intron | 40.0% |
| ! | CTCCTTGTGATTTTGGATGA+GGG | + | chr1_3:62471432-62471451 | Msa0131590:intron | 40.0% |
| TTCCCTCATCCAAAATCACA+AGG | - | chr1_3:62471437-62471456 | None:intergenic | 40.0% | |
| AACTGAAATGTACTGTGTCG+TGG | + | chr1_3:62471566-62471585 | Msa0131590:intron | 40.0% | |
| TAGTCACGATCCCTATGAAA+AGG | - | chr1_3:62471730-62471749 | None:intergenic | 40.0% | |
| ACAGAGATAGGGAAAAGGAA+AGG | + | chr1_3:62471812-62471831 | Msa0131590:CDS | 40.0% | |
| CAGAGATAGGGAAAAGGAAA+GGG | + | chr1_3:62471813-62471832 | Msa0131590:CDS | 40.0% | |
| AAAAGGAAAGGGACAGAGAT+AGG | + | chr1_3:62471824-62471843 | Msa0131590:CDS | 40.0% | |
| AAAGGAAAGGGACAGAGATA+GGG | + | chr1_3:62471825-62471844 | Msa0131590:CDS | 40.0% | |
| TTTCTTCCCTCAGACGATAT+CGG | - | chr1_3:62471864-62471883 | None:intergenic | 40.0% | |
| ATATCGTCTGAGGGAAGAAA+AGG | + | chr1_3:62471864-62471883 | Msa0131590:CDS | 40.0% | |
| CTGAGGGAAGAAAAGGATTA+TGG | + | chr1_3:62471871-62471890 | Msa0131590:CDS | 40.0% | |
| AGAAGGAAAAGAAGGATGAC+GGG | + | chr1_3:62472106-62472125 | Msa0131590:CDS | 40.0% | |
| TGTATGGCTTGAATTTGGAC+TGG | + | chr1_3:62472214-62472233 | Msa0131590:three_prime_UTR | 40.0% | |
| GTATGGCTTGAATTTGGACT+GGG | + | chr1_3:62472215-62472234 | Msa0131590:three_prime_UTR | 40.0% | |
| AACACTCTAGTTGTCAGTAC+AGG | - | chr1_3:62472446-62472465 | None:intergenic | 40.0% | |
| TTCATGACGAGGCACATGAA+GGG | - | chr1_3:62468828-62468847 | None:intergenic | 45.0% | |
| TTTCATGACGAGGCACATGA+AGG | - | chr1_3:62468829-62468848 | None:intergenic | 45.0% | |
| ATGCAGGTATGTGAGGATAC+TGG | + | chr1_3:62468999-62469018 | Msa0131590:intron | 45.0% | |
| TGCAGGTATGTGAGGATACT+GGG | + | chr1_3:62469000-62469019 | Msa0131590:intron | 45.0% | |
| GAAACTGCGGAGGAAATTAC+CGG | + | chr1_3:62469098-62469117 | Msa0131590:CDS | 45.0% | |
| GAGAAAACTTGTGGATGCTG+CGG | + | chr1_3:62469475-62469494 | Msa0131590:intron | 45.0% | |
| GGAGAGTAAATCAGATGGAG+GGG | + | chr1_3:62469501-62469520 | Msa0131590:intron | 45.0% | |
| GGTGTCAAATCACTAGAGGT+AGG | + | chr1_3:62469522-62469541 | Msa0131590:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr1_3:62469663-62469682 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr1_3:62469664-62469683 | None:intergenic | 45.0% |
| ! | AGGTGGACTCTTGAATCTCT+TGG | + | chr1_3:62469893-62469912 | Msa0131590:intron | 45.0% |
| !! | AGAGGATTTTGAGGAGGAAG+AGG | + | chr1_3:62469946-62469965 | Msa0131590:CDS | 45.0% |
| !! | AGAAAGGAAAGCACCTTCTC+AGG | - | chr1_3:62470004-62470023 | None:intergenic | 45.0% |
| GACGTGATAGTCATAGACAC+AGG | + | chr1_3:62470149-62470168 | Msa0131590:CDS | 45.0% | |
| ACATAGTGTGTGTGTGAGCA+GGG | - | chr1_3:62470358-62470377 | None:intergenic | 45.0% | |
| TACATAGTGTGTGTGTGAGC+AGG | - | chr1_3:62470359-62470378 | None:intergenic | 45.0% | |
| ! | AGGCCATCCTATCCAACTTT+TGG | + | chr1_3:62470935-62470954 | Msa0131590:intron | 45.0% |
| ! | GGCCATCCTATCCAACTTTT+GGG | + | chr1_3:62470936-62470955 | Msa0131590:intron | 45.0% |
| TGCCCAAAAGTTGGATAGGA+TGG | - | chr1_3:62470941-62470960 | None:intergenic | 45.0% | |
| !! | GGTGGTAAAGTTGGTACAGA+TGG | + | chr1_3:62471287-62471306 | Msa0131590:intron | 45.0% |
| AGAGATTATGACAGAGAGCG+TGG | + | chr1_3:62471766-62471785 | Msa0131590:CDS | 45.0% | |
| ATAGAGATCGGGACAGAGAT+AGG | + | chr1_3:62471800-62471819 | Msa0131590:CDS | 45.0% | |
| TAGAGATCGGGACAGAGATA+GGG | + | chr1_3:62471801-62471820 | Msa0131590:CDS | 45.0% | |
| GATTATGGTCGTGAGAGAGA+AGG | + | chr1_3:62471886-62471905 | Msa0131590:CDS | 45.0% | |
| AAGGAGTCGAAGTAGAAGCA+GGG | + | chr1_3:62471966-62471985 | Msa0131590:CDS | 45.0% | |
| ATCGCAAGGAACATGATGGT+GGG | + | chr1_3:62471989-62472008 | Msa0131590:CDS | 45.0% | |
| AGCGTAAGTCCTAGAAGAGA+TGG | + | chr1_3:62472039-62472058 | Msa0131590:CDS | 45.0% | |
| TGGTGAGCCAAAGAAGAAGA+AGG | + | chr1_3:62472071-62472090 | Msa0131590:CDS | 45.0% | |
| AATCTCTGGATCTGGATGGT+CGG | - | chr1_3:62472133-62472152 | None:intergenic | 45.0% | |
| CTGTTTGCTTCTGCAATCTC+TGG | - | chr1_3:62472147-62472166 | None:intergenic | 45.0% | |
| CAGAGATTGCAGAAGCAAAC+AGG | + | chr1_3:62472145-62472164 | Msa0131590:CDS | 45.0% | |
| AAACAGGATACGAGCATCAC+TGG | + | chr1_3:62472161-62472180 | Msa0131590:CDS | 45.0% | |
| AACAGGATACGAGCATCACT+GGG | + | chr1_3:62472162-62472181 | Msa0131590:CDS | 45.0% | |
| GGACTGGGTTACAAAAGACA+AGG | + | chr1_3:62472230-62472249 | Msa0131590:three_prime_UTR | 45.0% | |
| GGCAATAGCATGTTACCTCA+AGG | + | chr1_3:62472251-62472270 | Msa0131590:three_prime_UTR | 45.0% | |
| GTCAAACGTCACAAACCTTG+AGG | - | chr1_3:62472269-62472288 | None:intergenic | 45.0% | |
| ! | AGTTTTTGTACTGCCCTGAG+CGG | + | chr1_3:62472297-62472316 | Msa0131590:three_prime_UTR | 45.0% |
| GAATTGACAATTGCCGCTCA+GGG | - | chr1_3:62472313-62472332 | None:intergenic | 45.0% | |
| TGAATTGACAATTGCCGCTC+AGG | - | chr1_3:62472314-62472333 | None:intergenic | 45.0% | |
| GCGGCAATTGTCAATTCAAC+AGG | + | chr1_3:62472316-62472335 | Msa0131590:three_prime_UTR | 45.0% | |
| ATGTACTTGTGTAGGTGCAG+CGG | + | chr1_3:62472358-62472377 | Msa0131590:three_prime_UTR | 45.0% | |
| CACTGCTCTTGCGATATGAA+TGG | + | chr1_3:62472528-62472547 | Msa0131590:three_prime_UTR | 45.0% | |
| TGGATCAGTGCGATTTGCCA+TGG | - | chr1_3:62468622-62468641 | None:intergenic | 50.0% | |
| AACCCTAGTCGACAAAGCCA+TGG | + | chr1_3:62468755-62468774 | Msa0131590:CDS | 50.0% | |
| !! | CTCCATGGCTTTGTCGACTA+GGG | - | chr1_3:62468760-62468779 | None:intergenic | 50.0% |
| ! | ACATGAAGGGAGTGGGTTTC+CGG | - | chr1_3:62468815-62468834 | None:intergenic | 50.0% |
| AACTTGTGGATGCTGCGGTA+AGG | + | chr1_3:62469480-62469499 | Msa0131590:intron | 50.0% | |
| !! | GAGGGGTGTCAAATCACTAG+AGG | + | chr1_3:62469518-62469537 | Msa0131590:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1_3:62469659-62469678 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr1_3:62469665-62469684 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr1_3:62469662-62469681 | Msa0131590:intron | 50.0% | |
| TGAGGAGGAAGAGGAGAATG+AGG | + | chr1_3:62469955-62469974 | Msa0131590:CDS | 50.0% | |
| GGATAATGAACAGCCTGCTG+AGG | + | chr1_3:62469976-62469995 | Msa0131590:CDS | 50.0% | |
| CCCTATCTCTTTCCCTTGCA+GGG | - | chr1_3:62470123-62470142 | None:intergenic | 50.0% | |
| CCCTGCAAGGGAAAGAGATA+GGG | + | chr1_3:62470120-62470139 | Msa0131590:CDS | 50.0% | |
| TCCCTATCTCTTTCCCTTGC+AGG | - | chr1_3:62470124-62470143 | None:intergenic | 50.0% | |
| AATGGCTCTTTATGCCGCAG+TGG | - | chr1_3:62470413-62470432 | None:intergenic | 50.0% | |
| GCGGCATAAAGAGCCATTTG+CGG | + | chr1_3:62470415-62470434 | Msa0131590:intron | 50.0% | |
| ACTGTCAGTGCAGAGAAACC+TGG | - | chr1_3:62470479-62470498 | None:intergenic | 50.0% | |
| ! | GTACTGTGTCGTGGTTTTCG+TGG | + | chr1_3:62471575-62471594 | Msa0131590:intron | 50.0% |
| CACTGTTTGGATAACGTCCG+TGG | + | chr1_3:62471623-62471642 | Msa0131590:intron | 50.0% | |
| CTCTGTCCCGATCTCTATCT+CGG | - | chr1_3:62471798-62471817 | None:intergenic | 50.0% | |
| TCGGGACAGAGATAGGGAAA+AGG | + | chr1_3:62471807-62471826 | Msa0131590:CDS | 50.0% | |
| AAAGGGACAGAGATAGGGAG+AGG | + | chr1_3:62471830-62471849 | Msa0131590:CDS | 50.0% | |
| AAGGGACAGAGATAGGGAGA+GGG | + | chr1_3:62471831-62471850 | Msa0131590:CDS | 50.0% | |
| ACAGAGACCGATATCGTCTG+AGG | + | chr1_3:62471854-62471873 | Msa0131590:CDS | 50.0% | |
| CAGAGACCGATATCGTCTGA+GGG | + | chr1_3:62471855-62471874 | Msa0131590:CDS | 50.0% | |
| CAAGGAGTCGAAGTAGAAGC+AGG | + | chr1_3:62471965-62471984 | Msa0131590:CDS | 50.0% | |
| AAGTAGAAGCAGGGATCGCA+AGG | + | chr1_3:62471975-62471994 | Msa0131590:CDS | 50.0% | |
| AGGGATCGCAAGGAACATGA+TGG | + | chr1_3:62471985-62472004 | Msa0131590:CDS | 50.0% | |
| GATCGCAAGGAACATGATGG+TGG | + | chr1_3:62471988-62472007 | Msa0131590:CDS | 50.0% | |
| ! | TCGCAAGGAACATGATGGTG+GGG | + | chr1_3:62471990-62472009 | Msa0131590:CDS | 50.0% |
| TCCTAGAAGAGATGGAGCTG+AGG | + | chr1_3:62472047-62472066 | Msa0131590:CDS | 50.0% | |
| TCCTCAGCTCCATCTCTTCT+AGG | - | chr1_3:62472051-62472070 | None:intergenic | 50.0% | |
| AGAAGAGATGGAGCTGAGGA+TGG | + | chr1_3:62472051-62472070 | Msa0131590:CDS | 50.0% | |
| CTGCAATCTCTGGATCTGGA+TGG | - | chr1_3:62472137-62472156 | None:intergenic | 50.0% | |
| GCTTCTGCAATCTCTGGATC+TGG | - | chr1_3:62472141-62472160 | None:intergenic | 50.0% | |
| !! | GCTCCATGGCTTTGTCGACT+AGG | - | chr1_3:62468761-62468780 | None:intergenic | 55.0% |
| ACGAGGCACATGAAGGGAGT+GGG | - | chr1_3:62468822-62468841 | None:intergenic | 55.0% | |
| CTGCGGAGGAAATTACCGGA+TGG | + | chr1_3:62469102-62469121 | Msa0131590:CDS | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1_3:62469650-62469669 | Msa0131590:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1_3:62469651-62469670 | Msa0131590:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1_3:62469657-62469676 | Msa0131590:intron | 55.0% | |
| GCCCTGCAAGGGAAAGAGAT+AGG | + | chr1_3:62470119-62470138 | Msa0131590:CDS | 55.0% | |
| TCAGTGCAGAGAAACCTGGC+AGG | - | chr1_3:62470475-62470494 | None:intergenic | 55.0% | |
| ! | TATGACAGAGAGCGTGGACG+TGG | + | chr1_3:62471772-62471791 | Msa0131590:CDS | 55.0% |
| GACGTGGCCGAGATAGAGAT+CGG | + | chr1_3:62471788-62471807 | Msa0131590:CDS | 55.0% | |
| ACGTGGCCGAGATAGAGATC+GGG | + | chr1_3:62471789-62471808 | Msa0131590:CDS | 55.0% | |
| ATGGTCGTGAGAGAGAAGGC+AGG | + | chr1_3:62471890-62471909 | Msa0131590:CDS | 55.0% | |
| TGGTCGTGAGAGAGAAGGCA+GGG | + | chr1_3:62471891-62471910 | Msa0131590:CDS | 55.0% | |
| AGAGACAGAGATCGTGACCG+TGG | + | chr1_3:62471925-62471944 | Msa0131590:CDS | 55.0% | |
| ACAGAGATCGTGACCGTGGT+AGG | + | chr1_3:62471929-62471948 | Msa0131590:CDS | 55.0% | |
| AGTAGCTCCTCCTCCTACCA+CGG | - | chr1_3:62471945-62471964 | None:intergenic | 55.0% | |
| GTAGGAGGAGGAGCTACTCA+AGG | + | chr1_3:62471947-62471966 | Msa0131590:CDS | 55.0% | |
| TGTAGGTGCAGCGGTATGCT+TGG | + | chr1_3:62472367-62472386 | Msa0131590:three_prime_UTR | 55.0% | |
| CCTCGAATGCTCTTCGCTGC+TGG | - | chr1_3:62468642-62468661 | None:intergenic | 60.0% | |
| !! | CCAGCAGCGAAGAGCATTCG+AGG | + | chr1_3:62468639-62468658 | Msa0131590:CDS | 60.0% |
| GACGAGGCACATGAAGGGAG+TGG | - | chr1_3:62468823-62468842 | None:intergenic | 60.0% | |
| ACCTTCTCAGGCTCCTCAGC+AGG | - | chr1_3:62469992-62470011 | None:intergenic | 60.0% | |
| GAGATCGTGACCGTGGTAGG+AGG | + | chr1_3:62471932-62471951 | Msa0131590:CDS | 60.0% | |
| ATCGTGACCGTGGTAGGAGG+AGG | + | chr1_3:62471935-62471954 | Msa0131590:CDS | 60.0% | |
| GCCATGGAGCTCGACCACCT+CGG | + | chr1_3:62468771-62468790 | Msa0131590:CDS | 65.0% | |
| ATGGAGCTCGACCACCTCGG+CGG | + | chr1_3:62468774-62468793 | Msa0131590:CDS | 65.0% | |
| GACCACCTCGGCGGCACTTA+CGG | + | chr1_3:62468783-62468802 | Msa0131590:CDS | 65.0% | |
| GCGGCACTTACGGTGGCAAC+CGG | + | chr1_3:62468793-62468812 | Msa0131590:CDS | 65.0% | |
| GCCTGCTGAGGAGCCTGAGA+AGG | + | chr1_3:62469988-62470007 | Msa0131590:CDS | 65.0% | |
| ATCGTGGGCGAAGCCCTGCA+AGG | + | chr1_3:62470107-62470126 | Msa0131590:CDS | 65.0% | |
| TCGTGGGCGAAGCCCTGCAA+GGG | + | chr1_3:62470108-62470127 | Msa0131590:CDS | 65.0% | |
| GCCGAGGTGGTCGAGCTCCA+TGG | - | chr1_3:62468775-62468794 | None:intergenic | 70.0% | |
| ! | CACCGTAAGTGCCGCCGAGG+TGG | - | chr1_3:62468788-62468807 | None:intergenic | 70.0% |
| CACCTCGGCGGCACTTACGG+TGG | + | chr1_3:62468786-62468805 | Msa0131590:CDS | 70.0% | |
| ! | TGCCACCGTAAGTGCCGCCG+AGG | - | chr1_3:62468791-62468810 | None:intergenic | 70.0% |
| ! | GAGAAGGCAGGGAGCGCGAG+AGG | + | chr1_3:62471902-62471921 | Msa0131590:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 62468541 | 62472566 | 62468541 | ID=Msa0131590;Name=Msa0131590 |
| chr1_3 | mRNA | 62468541 | 62472566 | 62468541 | ID=Msa0131590-mRNA-1;Parent=Msa0131590;Name=Msa0131590-mRNA-1;_AED=0.04;_eAED=0.04;_QI=80|1|1|1|1|1|6|360|385 |
| chr1_3 | exon | 62468541 | 62468910 | 62468541 | ID=Msa0131590-mRNA-1:exon:20779;Parent=Msa0131590-mRNA-1 |
| chr1_3 | exon | 62469005 | 62469126 | 62469005 | ID=Msa0131590-mRNA-1:exon:20780;Parent=Msa0131590-mRNA-1 |
| chr1_3 | exon | 62469230 | 62469320 | 62469230 | ID=Msa0131590-mRNA-1:exon:20781;Parent=Msa0131590-mRNA-1 |
| chr1_3 | exon | 62469895 | 62470009 | 62469895 | ID=Msa0131590-mRNA-1:exon:20782;Parent=Msa0131590-mRNA-1 |
| chr1_3 | exon | 62470100 | 62470170 | 62470100 | ID=Msa0131590-mRNA-1:exon:20783;Parent=Msa0131590-mRNA-1 |
| chr1_3 | exon | 62471738 | 62472566 | 62471738 | ID=Msa0131590-mRNA-1:exon:20784;Parent=Msa0131590-mRNA-1 |
| chr1_3 | five_prime_UTR | 62468541 | 62468620 | 62468541 | ID=Msa0131590-mRNA-1:five_prime_utr;Parent=Msa0131590-mRNA-1 |
| chr1_3 | CDS | 62468621 | 62468910 | 62468621 | ID=Msa0131590-mRNA-1:cds;Parent=Msa0131590-mRNA-1 |
| chr1_3 | CDS | 62469005 | 62469126 | 62469005 | ID=Msa0131590-mRNA-1:cds;Parent=Msa0131590-mRNA-1 |
| chr1_3 | CDS | 62469230 | 62469320 | 62469230 | ID=Msa0131590-mRNA-1:cds;Parent=Msa0131590-mRNA-1 |
| chr1_3 | CDS | 62469895 | 62470009 | 62469895 | ID=Msa0131590-mRNA-1:cds;Parent=Msa0131590-mRNA-1 |
| chr1_3 | CDS | 62470100 | 62470170 | 62470100 | ID=Msa0131590-mRNA-1:cds;Parent=Msa0131590-mRNA-1 |
| chr1_3 | CDS | 62471738 | 62472206 | 62471738 | ID=Msa0131590-mRNA-1:cds;Parent=Msa0131590-mRNA-1 |
| chr1_3 | three_prime_UTR | 62472207 | 62472566 | 62472207 | ID=Msa0131590-mRNA-1:three_prime_utr;Parent=Msa0131590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
