Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759230 | sp|F4JZ24|P4H10_ARATH | 73.264 | 288 | 71 | 3 | 1 | 283 | 2 | 288 | 3.05e-155 | 437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759230 | G7JYR0 | 93.772 | 289 | 13 | 1 | 1 | 284 | 1 | 289 | 0.0 | 558 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0759230 | -0.820461 | 6.777499e-53 | -8.615850e-47 |
| Msa0011060 | Msa0759230 | -0.800725 | 1.259725e-48 | -8.615850e-47 |
| Msa0017300 | Msa0759230 | -0.805603 | 1.232738e-49 | -8.615850e-47 |
| Msa0044010 | Msa0759230 | 0.800248 | 1.575760e-48 | -8.615850e-47 |
| Msa0056230 | Msa0759230 | -0.809375 | 1.952094e-50 | -8.615850e-47 |
| Msa0620080 | Msa0759230 | 0.804051 | 2.600322e-49 | -8.615850e-47 |
| Msa0660150 | Msa0759230 | 0.832008 | 1.207969e-55 | -8.615850e-47 |
| Msa0701800 | Msa0759230 | -0.802696 | 4.963299e-49 | -8.615850e-47 |
| Msa0712860 | Msa0759230 | 0.802735 | 4.872060e-49 | -8.615850e-47 |
| Msa0726170 | Msa0759230 | -0.801180 | 1.017027e-48 | -8.615850e-47 |
| Msa0742370 | Msa0759230 | -0.807481 | 4.950339e-50 | -8.615850e-47 |
| Msa0759230 | Msa0761720 | 0.807853 | 4.125768e-50 | -8.615850e-47 |
| Msa0759230 | Msa0779450 | -0.812612 | 3.884584e-51 | -8.615850e-47 |
| Msa0759230 | Msa0800480 | 0.802924 | 4.453465e-49 | -8.615850e-47 |
| Msa0759230 | Msa0805390 | 0.804540 | 2.057088e-49 | -8.615850e-47 |
| Msa0759230 | Msa0838480 | 0.850602 | 1.527178e-60 | -8.615850e-47 |
| Msa0759230 | Msa0862480 | -0.803896 | 2.800468e-49 | -8.615850e-47 |
| Msa0759230 | Msa0869320 | -0.805051 | 1.608603e-49 | -8.615850e-47 |
| Msa0759230 | Msa0934290 | -0.812418 | 4.282939e-51 | -8.615850e-47 |
| Msa0759230 | Msa0969590 | 0.813591 | 2.369342e-51 | -8.615850e-47 |
| Msa0759230 | Msa0971780 | -0.820335 | 7.243656e-53 | -8.615850e-47 |
| Msa0759230 | Msa1014550 | -0.842967 | 1.871374e-58 | -8.615850e-47 |
| Msa0759230 | Msa1055520 | -0.847285 | 1.274006e-59 | -8.615850e-47 |
| Msa0759230 | Msa1078760 | -0.801768 | 7.705602e-49 | -8.615850e-47 |
| Msa0759230 | Msa1088400 | -0.803467 | 3.438427e-49 | -8.615850e-47 |
| Msa0759230 | Msa1089220 | 0.818453 | 1.944795e-52 | -8.615850e-47 |
| Msa0759230 | Msa1093190 | -0.818269 | 2.140791e-52 | -8.615850e-47 |
| Msa0759230 | Msa1129240 | 0.828666 | 7.919345e-55 | -8.615850e-47 |
| Msa0759230 | Msa1169590 | -0.802534 | 5.361442e-49 | -8.615850e-47 |
| Msa0759230 | Msa1202470 | 0.830938 | 2.215030e-55 | -8.615850e-47 |
| Msa0759230 | Msa1213470 | -0.817714 | 2.857842e-52 | -8.615850e-47 |
| Msa0759230 | Msa1249600 | 0.804112 | 2.526109e-49 | -8.615850e-47 |
| Msa0759230 | Msa1254910 | 0.818163 | 2.261847e-52 | -8.615850e-47 |
| Msa0759230 | Msa1300370 | -0.820117 | 8.126083e-53 | -8.615850e-47 |
| Msa0759230 | Msa1331570 | -0.807052 | 6.100613e-50 | -8.615850e-47 |
| Msa0759230 | Msa1331720 | -0.800539 | 1.374796e-48 | -8.615850e-47 |
| Msa0759230 | Msa1333220 | -0.813547 | 2.421564e-51 | -8.615850e-47 |
| Msa0759230 | Msa1363280 | -0.806133 | 9.537373e-50 | -8.615850e-47 |
| Msa0759230 | Msa1364110 | 0.830026 | 3.701901e-55 | -8.615850e-47 |
| Msa0759230 | Msa1453430 | 0.802798 | 4.728381e-49 | -8.615850e-47 |
| Msa0759230 | Msa1459130 | -0.808816 | 2.572028e-50 | -8.615850e-47 |
| Msa0224110 | Msa0759230 | 0.830564 | 2.735511e-55 | -8.615850e-47 |
| Msa0373550 | Msa0759230 | 0.814649 | 1.383231e-51 | -8.615850e-47 |
| Msa0468660 | Msa0759230 | 0.827873 | 1.230275e-54 | -8.615850e-47 |
| Msa0265250 | Msa0759230 | 0.815690 | 8.124920e-52 | -8.615850e-47 |
| Msa0294200 | Msa0759230 | 0.811323 | 7.414913e-51 | -8.615850e-47 |
| Msa0502900 | Msa0759230 | -0.806463 | 8.126298e-50 | -8.615850e-47 |
| Msa0563440 | Msa0759230 | 0.814284 | 1.666011e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759230 | MtrunA17_Chr5g0406051 | 93.772 | 289 | 13 | 1 | 1 | 284 | 1 | 289 | 0.0 | 558 |
| Msa0759230 | MtrunA17_Chr3g0143381 | 61.938 | 289 | 96 | 4 | 1 | 284 | 1 | 280 | 6.42e-130 | 370 |
| Msa0759230 | MtrunA17_Chr8g0371221 | 63.918 | 291 | 85 | 5 | 1 | 284 | 1 | 278 | 9.13e-129 | 367 |
| Msa0759230 | MtrunA17_Chr8g0371251 | 60.069 | 288 | 100 | 3 | 1 | 283 | 1 | 278 | 9.73e-124 | 354 |
| Msa0759230 | MtrunA17_Chr8g0371281 | 59.582 | 287 | 99 | 3 | 1 | 282 | 1 | 275 | 2.94e-121 | 348 |
| Msa0759230 | MtrunA17_Chr8g0371231 | 66.000 | 200 | 63 | 1 | 88 | 282 | 2 | 201 | 5.06e-95 | 278 |
| Msa0759230 | MtrunA17_Chr6g0452281 | 53.081 | 211 | 93 | 2 | 78 | 283 | 51 | 260 | 1.15e-75 | 233 |
| Msa0759230 | MtrunA17_Chr2g0286811 | 53.704 | 216 | 87 | 3 | 78 | 282 | 40 | 253 | 4.62e-75 | 231 |
| Msa0759230 | MtrunA17_Chr8g0371241 | 64.571 | 175 | 40 | 3 | 110 | 279 | 1 | 158 | 1.20e-73 | 223 |
| Msa0759230 | MtrunA17_Chr3g0143361 | 62.011 | 179 | 57 | 2 | 110 | 283 | 1 | 173 | 6.52e-71 | 217 |
| Msa0759230 | MtrunA17_Chr4g0066531 | 51.887 | 212 | 95 | 3 | 78 | 282 | 37 | 248 | 9.28e-71 | 220 |
| Msa0759230 | MtrunA17_Chr1g0213811 | 50.661 | 227 | 91 | 5 | 65 | 278 | 58 | 276 | 2.60e-65 | 206 |
| Msa0759230 | MtrunA17_Chr3g0143371 | 59.236 | 157 | 54 | 2 | 110 | 261 | 1 | 152 | 7.66e-57 | 179 |
| Msa0759230 | MtrunA17_Chr4g0053801 | 46.190 | 210 | 97 | 8 | 79 | 278 | 86 | 289 | 1.91e-56 | 183 |
| Msa0759230 | MtrunA17_Chr3g0143351 | 54.494 | 178 | 71 | 3 | 110 | 283 | 1 | 172 | 1.92e-54 | 174 |
| Msa0759230 | MtrunA17_Chr5g0401481 | 40.625 | 224 | 105 | 6 | 79 | 278 | 84 | 303 | 4.66e-47 | 159 |
| Msa0759230 | MtrunA17_Chr6g0470551 | 29.323 | 266 | 145 | 9 | 28 | 279 | 4 | 240 | 3.11e-29 | 112 |
| Msa0759230 | MtrunA17_Chr3g0098671 | 51.685 | 89 | 41 | 2 | 134 | 221 | 10 | 97 | 2.09e-22 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759230 | AT5G66060.1 | 73.264 | 288 | 71 | 3 | 1 | 283 | 2 | 288 | 3.10e-156 | 437 |
| Msa0759230 | AT1G20270.1 | 67.708 | 288 | 86 | 3 | 1 | 283 | 1 | 286 | 1.06e-144 | 408 |
| Msa0759230 | AT2G17720.1 | 67.958 | 284 | 86 | 2 | 5 | 283 | 7 | 290 | 1.86e-132 | 377 |
| Msa0759230 | AT4G35810.1 | 69.170 | 253 | 70 | 3 | 38 | 282 | 37 | 289 | 2.93e-128 | 366 |
| Msa0759230 | AT4G35810.2 | 69.170 | 253 | 70 | 3 | 38 | 282 | 37 | 289 | 2.93e-128 | 366 |
| Msa0759230 | AT5G66060.2 | 68.443 | 244 | 69 | 4 | 1 | 239 | 2 | 242 | 4.57e-116 | 333 |
| Msa0759230 | AT1G20270.2 | 61.576 | 203 | 71 | 3 | 1 | 198 | 1 | 201 | 1.89e-84 | 252 |
| Msa0759230 | AT1G20270.3 | 61.576 | 203 | 71 | 3 | 1 | 198 | 1 | 201 | 1.89e-84 | 252 |
| Msa0759230 | AT3G28480.1 | 43.774 | 265 | 140 | 4 | 24 | 283 | 5 | 265 | 1.93e-73 | 228 |
| Msa0759230 | AT5G18900.1 | 52.830 | 212 | 93 | 3 | 78 | 282 | 37 | 248 | 4.78e-73 | 226 |
| Msa0759230 | AT3G06300.1 | 52.582 | 213 | 92 | 3 | 78 | 282 | 38 | 249 | 5.96e-72 | 223 |
| Msa0759230 | AT3G28490.1 | 51.442 | 208 | 94 | 3 | 81 | 282 | 35 | 241 | 9.29e-69 | 215 |
| Msa0759230 | AT2G43080.1 | 54.028 | 211 | 76 | 6 | 79 | 278 | 78 | 278 | 2.74e-66 | 208 |
| Msa0759230 | AT3G28480.2 | 40.659 | 273 | 145 | 6 | 24 | 283 | 5 | 273 | 3.35e-63 | 202 |
| Msa0759230 | AT4G35820.1 | 53.000 | 200 | 59 | 5 | 75 | 261 | 85 | 262 | 6.28e-62 | 197 |
| Msa0759230 | AT4G33910.1 | 38.699 | 292 | 147 | 11 | 7 | 278 | 3 | 282 | 6.78e-53 | 174 |
| Msa0759230 | AT2G23096.1 | 34.672 | 274 | 158 | 7 | 20 | 282 | 10 | 273 | 3.11e-45 | 154 |
| Msa0759230 | AT4G25600.1 | 30.457 | 197 | 116 | 4 | 81 | 277 | 62 | 237 | 4.54e-21 | 90.9 |
| Msa0759230 | AT2G43080.2 | 51.020 | 98 | 41 | 3 | 79 | 169 | 78 | 175 | 6.81e-20 | 85.5 |
| Msa0759230 | AT4G25600.3 | 29.688 | 192 | 114 | 4 | 86 | 277 | 6 | 176 | 2.74e-18 | 82.0 |
| Msa0759230 | AT4G25600.4 | 29.688 | 192 | 114 | 4 | 86 | 277 | 3 | 173 | 2.78e-18 | 82.0 |
| Msa0759230 | AT4G25600.2 | 29.688 | 192 | 114 | 4 | 86 | 277 | 15 | 185 | 3.96e-18 | 82.0 |
Find 87 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGAGCTCTGGAACATTTC+TGG | 0.221604 | 5_2:-14752581 | Msa0759230:CDS |
| TAGAGAAGGCCCCTCATAAA+TGG | 0.239782 | 5_2:+14750189 | None:intergenic |
| GGTGGTTGTCCGGTAATTAA+AGG | 0.264632 | 5_2:-14751418 | Msa0759230:CDS |
| GGTATACTTGTTACATCTAT+TGG | 0.280373 | 5_2:+14750275 | None:intergenic |
| CACTTATTTCCTTTAATTAC+CGG | 0.297860 | 5_2:+14751409 | None:intergenic |
| GTTACCTATCGACGGTGTTA+TGG | 0.331035 | 5_2:+14754747 | None:intergenic |
| AGTAAAGCATCACCTCTCTT+TGG | 0.342180 | 5_2:+14751664 | None:intergenic |
| GCTGAGACTTTGCACATGAT+TGG | 0.347183 | 5_2:+14750465 | None:intergenic |
| GAGGTAAGATCGTTGGGTTT+AGG | 0.404374 | 5_2:+14754776 | None:intergenic |
| TAGAGGGGTGGAAGAAAGAA+TGG | 0.405907 | 5_2:+14755049 | None:intergenic |
| ACTTCATACAATGGAGCTTA+AGG | 0.411019 | 5_2:-14750438 | Msa0759230:three_prime_UTR |
| GATGAATATAACACAAAGAA+TGG | 0.412374 | 5_2:-14751931 | Msa0759230:CDS |
| CTGAAATTCCCCTTAGCAGC+AGG | 0.415882 | 5_2:+14751745 | None:intergenic |
| TCTGTTGTTGCCCATTTATG+AGG | 0.416156 | 5_2:-14750200 | Msa0759230:three_prime_UTR |
| ATGAATATAACACAAAGAAT+GGG | 0.423938 | 5_2:-14751930 | Msa0759230:CDS |
| TTCATTGACGCGGATCCATT+TGG | 0.424011 | 5_2:+14751378 | None:intergenic |
| AAACGTTTGCAGCGTGATGC+GGG | 0.430352 | 5_2:-14750406 | Msa0759230:three_prime_UTR |
| CAAGTTCTACATTATGAAGT+TGG | 0.432869 | 5_2:-14751988 | Msa0759230:CDS |
| TGTAGAGTGCGTACGAGCTC+TGG | 0.433588 | 5_2:-14752592 | Msa0759230:intron |
| AGTGGGTTGAAGTTGTTTCA+TGG | 0.435815 | 5_2:-14754619 | Msa0759230:CDS |
| AAATGATGATGAAGAAGGTA+AGG | 0.435874 | 5_2:-14754648 | Msa0759230:CDS |
| CTGTTGTTGCCCATTTATGA+GGG | 0.441412 | 5_2:-14750199 | Msa0759230:three_prime_UTR |
| GCTCTGGAACATTTCTGGCC+AGG | 0.442526 | 5_2:-14752576 | Msa0759230:CDS |
| ACTTGAGTATATGTTACAAT+AGG | 0.465571 | 5_2:-14751349 | Msa0759230:intron |
| ATAACTTTCAGGTGGTTGTC+CGG | 0.466448 | 5_2:-14751428 | Msa0759230:intron |
| CAGATATTCACATTCCTCCT+TGG | 0.476063 | 5_2:+14752806 | None:intergenic |
| CTCTGGAACATTTCTGGCCA+GGG | 0.477488 | 5_2:-14752575 | Msa0759230:CDS |
| AAACGAGGAGAATGAGGATA+AGG | 0.480852 | 5_2:+14754837 | None:intergenic |
| ACAGTTGTTGATAGCGAGAC+TGG | 0.480980 | 5_2:-14752750 | Msa0759230:CDS |
| ACAATGGAGGTAAGATCGTT+GGG | 0.491811 | 5_2:+14754770 | None:intergenic |
| ACTGTTGACTTGTGCATACT+CGG | 0.491867 | 5_2:+14752768 | None:intergenic |
| GTGGGTTGAAGTTGTTTCAT+GGG | 0.493166 | 5_2:-14754618 | Msa0759230:CDS |
| GACAATGGAGGTAAGATCGT+TGG | 0.498696 | 5_2:+14754769 | None:intergenic |
| GATGCATCTAAAGTTGCATC+CGG | 0.502828 | 5_2:+14751625 | None:intergenic |
| TATAATGAGCTTTCTGATTG+TGG | 0.504044 | 5_2:-14751709 | Msa0759230:CDS |
| ATAAGTGGTCAAGTACCAAA+TGG | 0.506402 | 5_2:-14751393 | Msa0759230:CDS |
| GACAGTGTTCCCTGCTGCTA+AGG | 0.510901 | 5_2:-14751755 | Msa0759230:CDS |
| TTAGATGCATCAAGCTTGCA+TGG | 0.521772 | 5_2:-14751613 | Msa0759230:intron |
| TACAGTACAGATGTTGAAGA+AGG | 0.524814 | 5_2:-14751784 | Msa0759230:intron |
| AGAGAAGGCCCCTCATAAAT+GGG | 0.527596 | 5_2:+14750190 | None:intergenic |
| ATAATGAGCTTTCTGATTGT+GGG | 0.530607 | 5_2:-14751708 | Msa0759230:CDS |
| ACAGTGTTCCCTGCTGCTAA+GGG | 0.531155 | 5_2:-14751754 | Msa0759230:CDS |
| TTGTGATACACAAAAGCTCT+AGG | 0.533206 | 5_2:+14754593 | None:intergenic |
| AACAAATAACAACGATACAC+GGG | 0.534389 | 5_2:+14750227 | None:intergenic |
| AGAAGGTAAGGGAGAACAGT+GGG | 0.535261 | 5_2:-14754636 | Msa0759230:CDS |
| AAGAAGGTAAGGGAGAACAG+TGG | 0.536453 | 5_2:-14754637 | Msa0759230:CDS |
| CTGGAAAGAGCAAAGACAGC+AGG | 0.539433 | 5_2:-14752731 | Msa0759230:intron |
| ATTAGAAATGATGATGAAGA+AGG | 0.541569 | 5_2:-14754653 | Msa0759230:intron |
| CACAATCTTATCACGTCCCC+TGG | 0.546111 | 5_2:+14752558 | None:intergenic |
| CAGTACAGATGTTGAAGAAG+GGG | 0.549364 | 5_2:-14751782 | Msa0759230:CDS |
| TTCCGAAAACGAGGAGAATG+AGG | 0.556929 | 5_2:+14754831 | None:intergenic |
| ATACTGTTACGACTAGGTAG+AGG | 0.560720 | 5_2:+14755032 | None:intergenic |
| AATGATGATGAAGAAGGTAA+GGG | 0.561127 | 5_2:-14754647 | Msa0759230:CDS |
| GAAACGTTTGCAGCGTGATG+CGG | 0.564649 | 5_2:-14750407 | Msa0759230:three_prime_UTR |
| AAACAAATAACAACGATACA+CGG | 0.564734 | 5_2:+14750226 | None:intergenic |
| AATGGAGCTTAAGGTCTCAA+AGG | 0.569975 | 5_2:-14750429 | Msa0759230:three_prime_UTR |
| ACAGTACAGATGTTGAAGAA+GGG | 0.576370 | 5_2:-14751783 | Msa0759230:intron |
| TGTTGTTGCCCATTTATGAG+GGG | 0.576745 | 5_2:-14750198 | Msa0759230:three_prime_UTR |
| TACTGTTACGACTAGGTAGA+GGG | 0.581719 | 5_2:+14755033 | None:intergenic |
| TGAAATTCCCCTTAGCAGCA+GGG | 0.595044 | 5_2:+14751746 | None:intergenic |
| CGGTAATTAAAGGAAATAAG+TGG | 0.603669 | 5_2:-14751408 | Msa0759230:CDS |
| AACGTTTGCAGCGTGATGCG+GGG | 0.604419 | 5_2:-14750405 | Msa0759230:three_prime_UTR |
| ATACACGGGGCAAATGAGCT+CGG | 0.605320 | 5_2:+14750241 | None:intergenic |
| TGAATATAACACAAAGAATG+GGG | 0.607097 | 5_2:-14751929 | Msa0759230:CDS |
| GATTGGAAGAAGGAATGGAG+AGG | 0.608811 | 5_2:+14754807 | None:intergenic |
| CTTTCAATTAAGCCAAAGAG+AGG | 0.612559 | 5_2:-14751676 | Msa0759230:CDS |
| CAATATACAGAGCACGGTGA+AGG | 0.613394 | 5_2:-14752015 | Msa0759230:CDS |
| ATCGACGGTGTTATGGACAA+TGG | 0.613757 | 5_2:+14754754 | None:intergenic |
| TTGTCCATAACACCGTCGAT+AGG | 0.625451 | 5_2:-14754751 | Msa0759230:intron |
| ACCGTGCTCTGTATATTGTG+AGG | 0.626206 | 5_2:+14752020 | None:intergenic |
| GCCTCACAATATACAGAGCA+CGG | 0.627831 | 5_2:-14752021 | Msa0759230:CDS |
| TCAGCTAATACTTCATACAA+TGG | 0.630016 | 5_2:-14750447 | Msa0759230:three_prime_UTR |
| CAGTGTTCCCTGCTGCTAAG+GGG | 0.641768 | 5_2:-14751753 | Msa0759230:CDS |
| TCTGGAACATTTCTGGCCAG+GGG | 0.649054 | 5_2:-14752574 | Msa0759230:CDS |
| TCAAGAAAGTAGTCATAGTG+AGG | 0.653721 | 5_2:+14751952 | None:intergenic |
| TGGAGAGGATTCCGAAAACG+AGG | 0.656108 | 5_2:+14754822 | None:intergenic |
| GAATATAACACAAAGAATGG+GGG | 0.666678 | 5_2:-14751928 | Msa0759230:CDS |
| TTTGTAATACTGTTACGACT+AGG | 0.667886 | 5_2:+14755026 | None:intergenic |
| GGAATTTCAGTAATGTGCCG+TGG | 0.673959 | 5_2:-14751732 | Msa0759230:CDS |
| ACAGAAACGTTACCTATCGA+CGG | 0.675054 | 5_2:+14754739 | None:intergenic |
| GTTACGACTAGGTAGAGGGG+TGG | 0.697516 | 5_2:+14755037 | None:intergenic |
| ACAAATAACAACGATACACG+GGG | 0.699154 | 5_2:+14750228 | None:intergenic |
| AGTACAGATGTTGAAGAAGG+GGG | 0.701130 | 5_2:-14751781 | Msa0759230:CDS |
| GACGGTGTTATGGACAATGG+AGG | 0.705646 | 5_2:+14754757 | None:intergenic |
| ACTGTTACGACTAGGTAGAG+GGG | 0.713004 | 5_2:+14755034 | None:intergenic |
| TCAGAAAGCTCATTATACCA+CGG | 0.716313 | 5_2:+14751715 | None:intergenic |
| ATAATCTGAGTAGACCAAGG+AGG | 0.746271 | 5_2:-14752820 | Msa0759230:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAGCTATTTATATATTA+AGG | - | chr5_2:14750928-14750947 | Msa0759230:intron | 10.0% |
| !! | ATAAGCTATTTATATATTAA+GGG | - | chr5_2:14750929-14750948 | Msa0759230:intron | 10.0% |
| !!! | ATTATTTTTGTAAGTTATAT+TGG | + | chr5_2:14751069-14751088 | None:intergenic | 10.0% |
| !!! | AAAAAAAGAAATTAATTTTG+TGG | - | chr5_2:14752116-14752135 | Msa0759230:intron | 10.0% |
| !!! | AAAAAAGAAATTAATTTTGT+GGG | - | chr5_2:14752117-14752136 | Msa0759230:intron | 10.0% |
| !! | CAAATGTAAAAATAATATAT+TGG | + | chr5_2:14752949-14752968 | None:intergenic | 10.0% |
| !!! | CAATATATTATTTTTACATT+TGG | - | chr5_2:14752947-14752966 | Msa0759230:intron | 10.0% |
| !!! | ATATTAAATTACTTTTTTGA+GGG | + | chr5_2:14754249-14754268 | None:intergenic | 10.0% |
| !!! | ATGAACTATATATATGTTTT+TGG | - | chr5_2:14750811-14750830 | Msa0759230:intron | 15.0% |
| !!! | AAGTAAGTTTTTTGTTTTAA+AGG | - | chr5_2:14751616-14751635 | Msa0759230:CDS | 15.0% |
| !!! | AAAAAAAAGAGTTAATTTTG+TGG | - | chr5_2:14751918-14751937 | Msa0759230:CDS | 15.0% |
| !!! | AAAAAAAGAGTTAATTTTGT+GGG | - | chr5_2:14751919-14751938 | Msa0759230:CDS | 15.0% |
| !!! | AAAAAGAAATTAATTTTGTG+GGG | - | chr5_2:14752118-14752137 | Msa0759230:intron | 15.0% |
| !! | TAATATTACACAATCATTAA+GGG | - | chr5_2:14752160-14752179 | Msa0759230:intron | 15.0% |
| !!! | AAAAAGTATATATAATAGGT+GGG | + | chr5_2:14752802-14752821 | None:intergenic | 15.0% |
| !!! | AAAAAAGTATATATAATAGG+TGG | + | chr5_2:14752803-14752822 | None:intergenic | 15.0% |
| !!! | TTAAGGGAATATTTTTTTTT+GGG | + | chr5_2:14752872-14752891 | None:intergenic | 15.0% |
| !!! | TTTAAGGGAATATTTTTTTT+TGG | + | chr5_2:14752873-14752892 | None:intergenic | 15.0% |
| !! | ATAAAAATTCAAATTCATGA+GGG | + | chr5_2:14753011-14753030 | None:intergenic | 15.0% |
| !! | AATAAAAATTCAAATTCATG+AGG | + | chr5_2:14753012-14753031 | None:intergenic | 15.0% |
| !!! | TATTAAATTACTTTTTTGAG+GGG | + | chr5_2:14754248-14754267 | None:intergenic | 15.0% |
| !!! | GATATTAAATTACTTTTTTG+AGG | + | chr5_2:14754250-14754269 | None:intergenic | 15.0% |
| !!! | GTTAATTTTTTTTCATACAA+GGG | + | chr5_2:14754508-14754527 | None:intergenic | 15.0% |
| !! | ATAAGTTATTACTGTAATTA+TGG | + | chr5_2:14754541-14754560 | None:intergenic | 15.0% |
| !!! | GTAATAATATTTAATTTTGC+TGG | - | chr5_2:14754728-14754747 | Msa0759230:intron | 15.0% |
| !! | TACATATAAATGAAAAAGAT+GGG | + | chr5_2:14754944-14754963 | None:intergenic | 15.0% |
| !! | TATGAATCGCATTAATAAAA+TGG | + | chr5_2:14750776-14750795 | None:intergenic | 20.0% |
| !!! | TTTTATGTTATCTTGTGTTA+TGG | - | chr5_2:14751490-14751509 | Msa0759230:intron | 20.0% |
| !! | AAATAAGTTGTTTACACAAA+CGG | - | chr5_2:14751551-14751570 | Msa0759230:intron | 20.0% |
| !! | AAAAAACACTATTCCAAATT+AGG | + | chr5_2:14751650-14751669 | None:intergenic | 20.0% |
| !!! | ATCTAACAAGTTAATTTTGT+GGG | - | chr5_2:14751890-14751909 | Msa0759230:intron | 20.0% |
| !!! | AAAAAAGAGTTAATTTTGTG+GGG | - | chr5_2:14751920-14751939 | Msa0759230:CDS | 20.0% |
| !! | CTAATATTACACAATCATTA+AGG | - | chr5_2:14752159-14752178 | Msa0759230:intron | 20.0% |
| !! | ACTAAAATCATATTCAAACA+TGG | + | chr5_2:14752331-14752350 | None:intergenic | 20.0% |
| !! | AGAAAGAAATATGTAAAGAT+GGG | + | chr5_2:14752664-14752683 | None:intergenic | 20.0% |
| !! | TAGAAAGAAATATGTAAAGA+TGG | + | chr5_2:14752665-14752684 | None:intergenic | 20.0% |
| !!! | AAAAGTATATATAATAGGTG+GGG | + | chr5_2:14752801-14752820 | None:intergenic | 20.0% |
| !! | TTACAAAAAGAGTTTATTTC+TGG | - | chr5_2:14753031-14753050 | Msa0759230:intron | 20.0% |
| !! | ATGAATATAACACAAAGAAT+GGG | - | chr5_2:14753349-14753368 | Msa0759230:intron | 20.0% |
| !! | AGAAAGAAAAAAAACACAAT+AGG | + | chr5_2:14754137-14754156 | None:intergenic | 20.0% |
| !!! | GTGTTTTTTTTCTTTCTTTA+AGG | - | chr5_2:14754140-14754159 | Msa0759230:intron | 20.0% |
| !!! | TTTTTTTTCTTTCTTTAAGG+TGG | - | chr5_2:14754143-14754162 | Msa0759230:intron | 20.0% |
| !!! | TTTTTTTCTTTCTTTAAGGT+GGG | - | chr5_2:14754144-14754163 | Msa0759230:intron | 20.0% |
| !!! | ATTAAATTACTTTTTTGAGG+GGG | + | chr5_2:14754247-14754266 | None:intergenic | 20.0% |
| !!! | CGTTAATTTTTTTTCATACA+AGG | + | chr5_2:14754509-14754528 | None:intergenic | 20.0% |
| !!! | TTTGTTTTGTTTTATAGCTT+AGG | - | chr5_2:14754905-14754924 | Msa0759230:CDS | 20.0% |
| !! | CTACATATAAATGAAAAAGA+TGG | + | chr5_2:14754945-14754964 | None:intergenic | 20.0% |
| ! | ATCTGAAAAAATTCAACAGA+TGG | + | chr5_2:14750306-14750325 | None:intergenic | 25.0% |
| !! | ATTAGAAATGATGATGAAGA+AGG | - | chr5_2:14750626-14750645 | Msa0759230:intron | 25.0% |
| !! | TTTTGTGTATCACAATTTTC+TGG | - | chr5_2:14750694-14750713 | Msa0759230:intron | 25.0% |
| ! | AATGCGATTCATAATTTGAT+CGG | - | chr5_2:14750783-14750802 | Msa0759230:intron | 25.0% |
| !!! | GATTGTTTGTTTTCTAGTTT+CGG | - | chr5_2:14750845-14750864 | Msa0759230:intron | 25.0% |
| ! | GCTATTTATATATTAAGGGT+CGG | - | chr5_2:14750933-14750952 | Msa0759230:intron | 25.0% |
| !! | TTATCTAGTGACATAAGTTT+TGG | - | chr5_2:14750977-14750996 | Msa0759230:intron | 25.0% |
| !! | TATCTAGTGACATAAGTTTT+GGG | - | chr5_2:14750978-14750997 | Msa0759230:intron | 25.0% |
| !! | CTTATTCAAGTTTATCTTCT+AGG | + | chr5_2:14751174-14751193 | None:intergenic | 25.0% |
| ! | CTTGAATAAGTGCTTATATA+AGG | - | chr5_2:14751184-14751203 | Msa0759230:intron | 25.0% |
| !!! | TATACTTCATAAGCTGTTTT+CGG | - | chr5_2:14751284-14751303 | Msa0759230:intron | 25.0% |
| ! | ATATTGGATCCTATATGTTA+AGG | - | chr5_2:14751715-14751734 | Msa0759230:CDS | 25.0% |
| ! | TATTGGATCCTATATGTTAA+GGG | - | chr5_2:14751716-14751735 | Msa0759230:CDS | 25.0% |
| ! | CGTGAAATGGAATAAAAATT+GGG | - | chr5_2:14751786-14751805 | Msa0759230:intron | 25.0% |
| ! | GTGAAATGGAATAAAAATTG+GGG | - | chr5_2:14751787-14751806 | Msa0759230:intron | 25.0% |
| ! | TGAAATGGAATAAAAATTGG+GGG | - | chr5_2:14751788-14751807 | Msa0759230:intron | 25.0% |
| !! | CATCTAACAAGTTAATTTTG+TGG | - | chr5_2:14751889-14751908 | Msa0759230:intron | 25.0% |
| ! | TACACACTAATAATAGAAGT+AGG | - | chr5_2:14751968-14751987 | Msa0759230:CDS | 25.0% |
| ! | ACACACTAATAATAGAAGTA+GGG | - | chr5_2:14751969-14751988 | Msa0759230:CDS | 25.0% |
| !! | ACCTAACAAGTTAATTTTGT+GGG | - | chr5_2:14752085-14752104 | Msa0759230:intron | 25.0% |
| !!! | TTTTAATTACTTGTGGTTCT+TGG | - | chr5_2:14752185-14752204 | Msa0759230:intron | 25.0% |
| ! | CTAAGTAGATAGTTAAACAA+AGG | + | chr5_2:14752222-14752241 | None:intergenic | 25.0% |
| !! | AAAACTATTTGTGTTTTGCT+TGG | - | chr5_2:14752254-14752273 | Msa0759230:intron | 25.0% |
| !!! | AATATGATTTTAGTGTGATG+TGG | - | chr5_2:14752337-14752356 | Msa0759230:intron | 25.0% |
| ! | AATAAATATTAATGCTCCAC+AGG | + | chr5_2:14752387-14752406 | None:intergenic | 25.0% |
| ! | GAAAGAAATATGTAAAGATG+GGG | + | chr5_2:14752663-14752682 | None:intergenic | 25.0% |
| ! | TGTTAACTGAAAATATTCAG+TGG | + | chr5_2:14753157-14753176 | None:intergenic | 25.0% |
| ! | CATAATAAAAGAAAGCTAGA+TGG | + | chr5_2:14753183-14753202 | None:intergenic | 25.0% |
| !!! | CATCTAGCTTTCTTTTATTA+TGG | - | chr5_2:14753181-14753200 | Msa0759230:intron | 25.0% |
| !! | TTATTATGGTCTAAGATAGT+AGG | - | chr5_2:14753195-14753214 | Msa0759230:intron | 25.0% |
| ! | GATGAATATAACACAAAGAA+TGG | - | chr5_2:14753348-14753367 | Msa0759230:intron | 25.0% |
| ! | TGAATATAACACAAAGAATG+GGG | - | chr5_2:14753350-14753369 | Msa0759230:intron | 25.0% |
| ! | TTACTAACTTCAATTTGTCT+TGG | - | chr5_2:14753426-14753445 | Msa0759230:intron | 25.0% |
| ! | CACTTATTTCCTTTAATTAC+CGG | + | chr5_2:14753873-14753892 | None:intergenic | 25.0% |
| ! | ACTTGAGTATATGTTACAAT+AGG | - | chr5_2:14753930-14753949 | Msa0759230:intron | 25.0% |
| ! | TTATTACAACAATACAACAG+AGG | + | chr5_2:14753971-14753990 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTTCTTTAAGGTG+GGG | - | chr5_2:14754145-14754164 | Msa0759230:intron | 25.0% |
| ! | TTACTTAAAACTGTAGATCT+AGG | - | chr5_2:14754351-14754370 | Msa0759230:intron | 25.0% |
| ! | TACTTAAAACTGTAGATCTA+GGG | - | chr5_2:14754352-14754371 | Msa0759230:intron | 25.0% |
| !!! | TGTTGATTGACTTATTTTTC+AGG | - | chr5_2:14754772-14754791 | Msa0759230:CDS | 25.0% |
| ! | AAACAAATAACAACGATACA+CGG | + | chr5_2:14755056-14755075 | None:intergenic | 25.0% |
| TTTGTAATACTGTTACGACT+AGG | + | chr5_2:14750256-14750275 | None:intergenic | 30.0% | |
| !!! | TTGAATTTTTTCAGATCTCG+TGG | - | chr5_2:14750310-14750329 | Msa0759230:three_prime_UTR | 30.0% |
| TCTGAAAAACTCAACAACAA+TGG | - | chr5_2:14750334-14750353 | Msa0759230:three_prime_UTR | 30.0% | |
| CATCAACACAAAAAAAAACG+CGG | + | chr5_2:14750589-14750608 | None:intergenic | 30.0% | |
| !!! | CGTTTTTTTTTGTGTTGATG+AGG | - | chr5_2:14750589-14750608 | Msa0759230:intron | 30.0% |
| ! | AAATGATGATGAAGAAGGTA+AGG | - | chr5_2:14750631-14750650 | Msa0759230:intron | 30.0% |
| ! | AATGATGATGAAGAAGGTAA+GGG | - | chr5_2:14750632-14750651 | Msa0759230:intron | 30.0% |
| ! | ATTTCTCTGTTTTGCATGTT+TGG | - | chr5_2:14750872-14750891 | Msa0759230:intron | 30.0% |
| TTATATATTAAGGGTCGGTT+TGG | - | chr5_2:14750938-14750957 | Msa0759230:intron | 30.0% | |
| TAATCATGTGTGACATTGTT+TGG | - | chr5_2:14751236-14751255 | Msa0759230:intron | 30.0% | |
| GCTATATGCTTAAAAATAGC+AGG | - | chr5_2:14751422-14751441 | Msa0759230:intron | 30.0% | |
| !! | AAGGTGATTTCTGGTAATAT+TGG | - | chr5_2:14751699-14751718 | Msa0759230:CDS | 30.0% |
| GCGTGAAATGGAATAAAAAT+TGG | - | chr5_2:14751785-14751804 | Msa0759230:intron | 30.0% | |
| ! | AAACCTTGTTTATGCATATC+AGG | + | chr5_2:14751852-14751871 | None:intergenic | 30.0% |
| CACACTAATAATAGAAGTAG+GGG | - | chr5_2:14751970-14751989 | Msa0759230:CDS | 30.0% | |
| ACACTAATAATAGAAGTAGG+GGG | - | chr5_2:14751971-14751990 | Msa0759230:CDS | 30.0% | |
| ! | AACCTTATTTATGCCATATC+AGG | + | chr5_2:14752044-14752063 | None:intergenic | 30.0% |
| ! | CACCTAACAAGTTAATTTTG+TGG | - | chr5_2:14752084-14752103 | Msa0759230:intron | 30.0% |
| !! | ACCCACAAAATTAACTTGTT+AGG | + | chr5_2:14751894-14751913 | None:intergenic | 30.0% |
| !! | AAGGGTCTTTTAATTACTTG+TGG | - | chr5_2:14752178-14752197 | Msa0759230:intron | 30.0% |
| TCAAACATGGAATTCAAACA+GGG | + | chr5_2:14752318-14752337 | None:intergenic | 30.0% | |
| TTCAAACATGGAATTCAAAC+AGG | + | chr5_2:14752319-14752338 | None:intergenic | 30.0% | |
| TTCAGCTAAACTTTAGTGAT+TGG | + | chr5_2:14752440-14752459 | None:intergenic | 30.0% | |
| ACACTTTAACAGAGAAAGAT+AGG | + | chr5_2:14752585-14752604 | None:intergenic | 30.0% | |
| !! | GACTTTACTTTTATTCCTGT+AGG | - | chr5_2:14752768-14752787 | Msa0759230:CDS | 30.0% |
| GTTGAATGCACAAAGTTTAA+GGG | + | chr5_2:14752888-14752907 | None:intergenic | 30.0% | |
| AGTTGAATGCACAAAGTTTA+AGG | + | chr5_2:14752889-14752908 | None:intergenic | 30.0% | |
| TACTCAAAAGTTCTCACTAA+CGG | + | chr5_2:14753108-14753127 | None:intergenic | 30.0% | |
| CAAGTTCTACATTATGAAGT+TGG | - | chr5_2:14753291-14753310 | Msa0759230:intron | 30.0% | |
| GAATATAACACAAAGAATGG+GGG | - | chr5_2:14753351-14753370 | Msa0759230:intron | 30.0% | |
| TATAATGAGCTTTCTGATTG+TGG | - | chr5_2:14753570-14753589 | Msa0759230:intron | 30.0% | |
| ATAATGAGCTTTCTGATTGT+GGG | - | chr5_2:14753571-14753590 | Msa0759230:intron | 30.0% | |
| !! | CTGTTTTCTTGATAACTTTC+AGG | - | chr5_2:14753840-14753859 | Msa0759230:intron | 30.0% |
| !! | TTTTCTTGATAACTTTCAGG+TGG | - | chr5_2:14753843-14753862 | Msa0759230:intron | 30.0% |
| CGGTAATTAAAGGAAATAAG+TGG | - | chr5_2:14753871-14753890 | Msa0759230:intron | 30.0% | |
| !! | AAGTTTTGTATTCATTGACG+CGG | + | chr5_2:14753914-14753933 | None:intergenic | 30.0% |
| CAATCATTTAGCTAAGTATC+AGG | + | chr5_2:14754057-14754076 | None:intergenic | 30.0% | |
| TATCTGATATGTGATCCAAT+GGG | + | chr5_2:14754279-14754298 | None:intergenic | 30.0% | |
| ATATCTGATATGTGATCCAA+TGG | + | chr5_2:14754280-14754299 | None:intergenic | 30.0% | |
| ! | TGCACCTATTGTGTTTATTT+TGG | - | chr5_2:14754322-14754341 | Msa0759230:intron | 30.0% |
| GAAGCCAAAATAAACACAAT+AGG | + | chr5_2:14754329-14754348 | None:intergenic | 30.0% | |
| AATAAGTCAATCAACATGAG+AGG | + | chr5_2:14754768-14754787 | None:intergenic | 30.0% | |
| TCAGCTAATACTTCATACAA+TGG | - | chr5_2:14754832-14754851 | Msa0759230:CDS | 30.0% | |
| ! | GGTATACTTGTTACATCTAT+TGG | + | chr5_2:14755007-14755026 | None:intergenic | 30.0% |
| AACAAATAACAACGATACAC+GGG | + | chr5_2:14755055-14755074 | None:intergenic | 30.0% | |
| ! | GAAGATGATGATTTTCGTGA+TGG | + | chr5_2:14750383-14750402 | None:intergenic | 35.0% |
| !!! | GTTTTGATTGGAAGAAGGAA+TGG | + | chr5_2:14750480-14750499 | None:intergenic | 35.0% |
| TTGTGATACACAAAAGCTCT+AGG | + | chr5_2:14750689-14750708 | None:intergenic | 35.0% | |
| AGAACTCATGAAAACAGCTT+AGG | - | chr5_2:14751001-14751020 | Msa0759230:intron | 35.0% | |
| TATGAGCTGTTTATCCAAAC+AGG | - | chr5_2:14751147-14751166 | Msa0759230:intron | 35.0% | |
| TTTATCTTCTAGGTCCTGTT+TGG | + | chr5_2:14751164-14751183 | None:intergenic | 35.0% | |
| AAAGGAAACACGTCCTAATT+TGG | - | chr5_2:14751634-14751653 | Msa0759230:CDS | 35.0% | |
| !! | GTGTGACTAGTCTACAAATT+GGG | - | chr5_2:14751672-14751691 | Msa0759230:CDS | 35.0% |
| AGTCTACAAATTGGGAAAGA+AGG | - | chr5_2:14751680-14751699 | Msa0759230:CDS | 35.0% | |
| GATCCTATATGTTAAGGGTT+TGG | - | chr5_2:14751721-14751740 | Msa0759230:CDS | 35.0% | |
| GTACCAAACCCTTAACATAT+AGG | + | chr5_2:14751727-14751746 | None:intergenic | 35.0% | |
| GTTTAGTGCATACCAATGAA+AGG | - | chr5_2:14751810-14751829 | Msa0759230:intron | 35.0% | |
| TAGCCTGATATGCATAAACA+AGG | - | chr5_2:14751846-14751865 | Msa0759230:intron | 35.0% | |
| ! | TAATTTTGTGGGGTTGAGTT+AGG | - | chr5_2:14751930-14751949 | Msa0759230:CDS | 35.0% |
| AGCCTGATATGGCATAAATA+AGG | - | chr5_2:14752039-14752058 | Msa0759230:CDS | 35.0% | |
| CTTGGTTAAATGATGCTTGA+TGG | - | chr5_2:14752272-14752291 | Msa0759230:intron | 35.0% | |
| GTTAAATGATGCTTGATGGA+AGG | - | chr5_2:14752276-14752295 | Msa0759230:intron | 35.0% | |
| AAACTTTAGTGATTGGAAGG+TGG | + | chr5_2:14752433-14752452 | None:intergenic | 35.0% | |
| GCTAAACTTTAGTGATTGGA+AGG | + | chr5_2:14752436-14752455 | None:intergenic | 35.0% | |
| TGAATAATCTGAGTAGACCA+AGG | - | chr5_2:14752456-14752475 | Msa0759230:intron | 35.0% | |
| !! | GTGTCCTCTGAAATTGAAAA+TGG | - | chr5_2:14752601-14752620 | Msa0759230:intron | 35.0% |
| ! | GCAACCATTTTCAATTTCAG+AGG | + | chr5_2:14752608-14752627 | None:intergenic | 35.0% |
| TTTCTTAACATGTGCCCTAA+GGG | + | chr5_2:14752848-14752867 | None:intergenic | 35.0% | |
| ATTTCTTAACATGTGCCCTA+AGG | + | chr5_2:14752849-14752868 | None:intergenic | 35.0% | |
| CTTCTAAACTTGTGCCTTAA+GGG | - | chr5_2:14752970-14752989 | Msa0759230:intron | 35.0% | |
| !! | AATGTTAACTTGTGCCCTTA+AGG | + | chr5_2:14752987-14753006 | None:intergenic | 35.0% |
| !! | AGTGAGAACTTTTGAGTAGT+TGG | - | chr5_2:14753110-14753129 | Msa0759230:intron | 35.0% |
| ! | ATGCTTGCTGAAGTATATGA+TGG | + | chr5_2:14753227-14753246 | None:intergenic | 35.0% |
| TCAAGAAAGTAGTCATAGTG+AGG | + | chr5_2:14753330-14753349 | None:intergenic | 35.0% | |
| TACAGTACAGATGTTGAAGA+AGG | - | chr5_2:14753495-14753514 | Msa0759230:intron | 35.0% | |
| ACAGTACAGATGTTGAAGAA+GGG | - | chr5_2:14753496-14753515 | Msa0759230:intron | 35.0% | |
| TCAGAAAGCTCATTATACCA+CGG | + | chr5_2:14753567-14753586 | None:intergenic | 35.0% | |
| CTTTCTGATTGTGGGAAAAA+AGG | - | chr5_2:14753579-14753598 | Msa0759230:intron | 35.0% | |
| CTTTCAATTAAGCCAAAGAG+AGG | - | chr5_2:14753603-14753622 | Msa0759230:intron | 35.0% | |
| ATAAGTGGTCAAGTACCAAA+TGG | - | chr5_2:14753886-14753905 | Msa0759230:intron | 35.0% | |
| !! | TCATCACAATAGCTTGCTAT+TGG | + | chr5_2:14754219-14754238 | None:intergenic | 35.0% |
| TTTAATATCGTGTGACCCAT+TGG | - | chr5_2:14754261-14754280 | Msa0759230:intron | 35.0% | |
| GCTTATGACATGTGTATAAG+CGG | - | chr5_2:14754440-14754459 | Msa0759230:intron | 35.0% | |
| !! | GGGAAGTGCTTATCATATAA+GGG | + | chr5_2:14754571-14754590 | None:intergenic | 35.0% |
| !! | TGGGAAGTGCTTATCATATA+AGG | + | chr5_2:14754572-14754591 | None:intergenic | 35.0% |
| TTCCCAAAATGTGTTTGTGT+GGG | - | chr5_2:14754586-14754605 | Msa0759230:CDS | 35.0% | |
| ! | TACCCACACAAACACATTTT+GGG | + | chr5_2:14754591-14754610 | None:intergenic | 35.0% |
| !! | GATTCTCAACTTCTGCTTTT+CGG | - | chr5_2:14754705-14754724 | Msa0759230:intron | 35.0% |
| !! | ATTCTCAACTTCTGCTTTTC+GGG | - | chr5_2:14754706-14754725 | Msa0759230:intron | 35.0% |
| ACTTCATACAATGGAGCTTA+AGG | - | chr5_2:14754841-14754860 | Msa0759230:CDS | 35.0% | |
| ACAAATAACAACGATACACG+GGG | + | chr5_2:14755054-14755073 | None:intergenic | 35.0% | |
| TACTGTTACGACTAGGTAGA+GGG | + | chr5_2:14750249-14750268 | None:intergenic | 40.0% | |
| ATACTGTTACGACTAGGTAG+AGG | + | chr5_2:14750250-14750269 | None:intergenic | 40.0% | |
| AAACGAGGAGAATGAGGATA+AGG | + | chr5_2:14750445-14750464 | None:intergenic | 40.0% | |
| ! | ATCCTCATTCTCCTCGTTTT+CGG | - | chr5_2:14750446-14750465 | Msa0759230:three_prime_UTR | 40.0% |
| !!! | GGCAAGTTTTGATTGGAAGA+AGG | + | chr5_2:14750485-14750504 | None:intergenic | 40.0% |
| !! | GGGTTTAGGCAAGTTTTGAT+TGG | + | chr5_2:14750492-14750511 | None:intergenic | 40.0% |
| ACAATGGAGGTAAGATCGTT+GGG | + | chr5_2:14750512-14750531 | None:intergenic | 40.0% | |
| ACAGAAACGTTACCTATCGA+CGG | + | chr5_2:14750543-14750562 | None:intergenic | 40.0% | |
| CGCGGAATCGAATGAAAAAA+CGG | + | chr5_2:14750571-14750590 | None:intergenic | 40.0% | |
| !! | AGTGGGTTGAAGTTGTTTCA+TGG | - | chr5_2:14750660-14750679 | Msa0759230:intron | 40.0% |
| ! | GTGGGTTGAAGTTGTTTCAT+GGG | - | chr5_2:14750661-14750680 | Msa0759230:intron | 40.0% |
| TCATGTGTGACATTGTTTGG+AGG | - | chr5_2:14751239-14751258 | Msa0759230:intron | 40.0% | |
| ACAAACCACAACCTTGACTA+AGG | + | chr5_2:14751577-14751596 | None:intergenic | 40.0% | |
| !! | CGTGTGACTAGTCTACAAAT+TGG | - | chr5_2:14751671-14751690 | Msa0759230:CDS | 40.0% |
| TTGGGAAAGAAGGTGATTTC+TGG | - | chr5_2:14751690-14751709 | Msa0759230:CDS | 40.0% | |
| GTGAGACTTAAGCCTTTCAT+TGG | + | chr5_2:14751825-14751844 | None:intergenic | 40.0% | |
| CTTTCTTTGGTATGTAGCCA+TGG | + | chr5_2:14752004-14752023 | None:intergenic | 40.0% | |
| CATGGCTACATACCAAAGAA+AGG | - | chr5_2:14752002-14752021 | Msa0759230:CDS | 40.0% | |
| ! | GTTGGACTTTAGCCTTTCTT+TGG | + | chr5_2:14752017-14752036 | None:intergenic | 40.0% |
| !! | TGTTTAACTTGAAGCTCCTG+TGG | - | chr5_2:14752368-14752387 | Msa0759230:intron | 40.0% |
| ATAATCTGAGTAGACCAAGG+AGG | - | chr5_2:14752459-14752478 | Msa0759230:intron | 40.0% | |
| CAGATATTCACATTCCTCCT+TGG | + | chr5_2:14752476-14752495 | None:intergenic | 40.0% | |
| !! | ACTGTTGACTTGTGCATACT+CGG | + | chr5_2:14752514-14752533 | None:intergenic | 40.0% |
| CATTGTTTCGATTGCCAGTA+TGG | - | chr5_2:14752633-14752652 | Msa0759230:intron | 40.0% | |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | - | chr5_2:14752830-14752849 | Msa0759230:intron | 40.0% |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | - | chr5_2:14752831-14752850 | Msa0759230:intron | 40.0% |
| GCTTCTAAACTTGTGCCTTA+AGG | - | chr5_2:14752969-14752988 | Msa0759230:intron | 40.0% | |
| CATCACATGCTATCACTTAC+AGG | + | chr5_2:14753404-14753423 | None:intergenic | 40.0% | |
| CAGTACAGATGTTGAAGAAG+GGG | - | chr5_2:14753497-14753516 | Msa0759230:intron | 40.0% | |
| AGTACAGATGTTGAAGAAGG+GGG | - | chr5_2:14753498-14753517 | Msa0759230:intron | 40.0% | |
| ! | AGTAAAGCATCACCTCTCTT+TGG | + | chr5_2:14753618-14753637 | None:intergenic | 40.0% |
| !! | GAGGTGATGCTTTACTTTTC+TGG | - | chr5_2:14753622-14753641 | Msa0759230:intron | 40.0% |
| ! | GATGCATCTAAAGTTGCATC+CGG | + | chr5_2:14753657-14753676 | None:intergenic | 40.0% |
| TTAGATGCATCAAGCTTGCA+TGG | - | chr5_2:14753666-14753685 | Msa0759230:intron | 40.0% | |
| ! | ATAACTTTCAGGTGGTTGTC+CGG | - | chr5_2:14753851-14753870 | Msa0759230:intron | 40.0% |
| TATGCGTTGCACTATTGCAT+AGG | + | chr5_2:14754179-14754198 | None:intergenic | 40.0% | |
| TATGCAATAGTGCAACGCAT+AGG | - | chr5_2:14754178-14754197 | Msa0759230:intron | 40.0% | |
| !!! | ATTACTTTTTTGAGGGGGAG+AGG | + | chr5_2:14754242-14754261 | None:intergenic | 40.0% |
| !!! | CAAGGGTGAGTTGTTTTAGT+TGG | + | chr5_2:14754491-14754510 | None:intergenic | 40.0% |
| CTTCCCAAAATGTGTTTGTG+TGG | - | chr5_2:14754585-14754604 | Msa0759230:intron | 40.0% | |
| ! | GTACCCACACAAACACATTT+TGG | + | chr5_2:14754592-14754611 | None:intergenic | 40.0% |
| AATGGAGCTTAAGGTCTCAA+AGG | - | chr5_2:14754850-14754869 | Msa0759230:CDS | 40.0% | |
| TCTGTTGTTGCCCATTTATG+AGG | - | chr5_2:14755079-14755098 | Msa0759230:five_prime_UTR | 40.0% | |
| CTGTTGTTGCCCATTTATGA+GGG | - | chr5_2:14755080-14755099 | Msa0759230:five_prime_UTR | 40.0% | |
| TGTTGTTGCCCATTTATGAG+GGG | - | chr5_2:14755081-14755100 | Msa0759230:five_prime_UTR | 40.0% | |
| TAGAGGGGTGGAAGAAAGAA+TGG | + | chr5_2:14750233-14750252 | None:intergenic | 45.0% | |
| ACTGTTACGACTAGGTAGAG+GGG | + | chr5_2:14750248-14750267 | None:intergenic | 45.0% | |
| TTCCGAAAACGAGGAGAATG+AGG | + | chr5_2:14750451-14750470 | None:intergenic | 45.0% | |
| GATTGGAAGAAGGAATGGAG+AGG | + | chr5_2:14750475-14750494 | None:intergenic | 45.0% | |
| GAGGTAAGATCGTTGGGTTT+AGG | + | chr5_2:14750506-14750525 | None:intergenic | 45.0% | |
| GACAATGGAGGTAAGATCGT+TGG | + | chr5_2:14750513-14750532 | None:intergenic | 45.0% | |
| !! | ATCGACGGTGTTATGGACAA+TGG | + | chr5_2:14750528-14750547 | None:intergenic | 45.0% |
| TTGTCCATAACACCGTCGAT+AGG | - | chr5_2:14750528-14750547 | Msa0759230:intron | 45.0% | |
| ! | GTTACCTATCGACGGTGTTA+TGG | + | chr5_2:14750535-14750554 | None:intergenic | 45.0% |
| AAGAAGGTAAGGGAGAACAG+TGG | - | chr5_2:14750642-14750661 | Msa0759230:intron | 45.0% | |
| AGAAGGTAAGGGAGAACAGT+GGG | - | chr5_2:14750643-14750662 | Msa0759230:intron | 45.0% | |
| TACACAAACGGCCTTAGTCA+AGG | - | chr5_2:14751563-14751582 | Msa0759230:intron | 45.0% | |
| AACTAGCAGCCTCAAACTCT+AGG | - | chr5_2:14751747-14751766 | Msa0759230:CDS | 45.0% | |
| TTGTTCCCTCCTAGAGTTTG+AGG | + | chr5_2:14751759-14751778 | None:intergenic | 45.0% | |
| ! | TCAAACTCTAGGAGGGAACA+AGG | - | chr5_2:14751758-14751777 | Msa0759230:CDS | 45.0% |
| GAACAAGGTTGTGCGTGAAA+TGG | - | chr5_2:14751773-14751792 | Msa0759230:CDS | 45.0% | |
| AAGTAGGGGGTTTAGTACCA+TGG | - | chr5_2:14751984-14752003 | Msa0759230:CDS | 45.0% | |
| AAGTCCAACGTAGCCTGATA+TGG | - | chr5_2:14752028-14752047 | Msa0759230:CDS | 45.0% | |
| TATGCCATATCAGGCTACGT+TGG | + | chr5_2:14752035-14752054 | None:intergenic | 45.0% | |
| !! | ACAGTTGTTGATAGCGAGAC+TGG | - | chr5_2:14752529-14752548 | Msa0759230:intron | 45.0% |
| AAAGAGCAAAGACAGCAGGT+AGG | - | chr5_2:14752552-14752571 | Msa0759230:intron | 45.0% | |
| AAAGATGGGGTTTGCCATAC+TGG | + | chr5_2:14752650-14752669 | None:intergenic | 45.0% | |
| !! | TACGAGCTCTGGAACATTTC+TGG | - | chr5_2:14752698-14752717 | Msa0759230:intron | 45.0% |
| GCCTCACAATATACAGAGCA+CGG | - | chr5_2:14753258-14753277 | Msa0759230:intron | 45.0% | |
| ACCGTGCTCTGTATATTGTG+AGG | + | chr5_2:14753262-14753281 | None:intergenic | 45.0% | |
| CAATATACAGAGCACGGTGA+AGG | - | chr5_2:14753264-14753283 | Msa0759230:intron | 45.0% | |
| TGAAATTCCCCTTAGCAGCA+GGG | + | chr5_2:14753536-14753555 | None:intergenic | 45.0% | |
| GGAATTTCAGTAATGTGCCG+TGG | - | chr5_2:14753547-14753566 | Msa0759230:intron | 45.0% | |
| !!! | ACTTTTCTGGAGCATGAAGC+CGG | - | chr5_2:14753635-14753654 | Msa0759230:intron | 45.0% |
| GGTGGTTGTCCGGTAATTAA+AGG | - | chr5_2:14753861-14753880 | Msa0759230:intron | 45.0% | |
| TTCATTGACGCGGATCCATT+TGG | + | chr5_2:14753904-14753923 | None:intergenic | 45.0% | |
| GCTGAGACTTTGCACATGAT+TGG | + | chr5_2:14754817-14754836 | None:intergenic | 45.0% | |
| AGAGAAGGCCCCTCATAAAT+GGG | + | chr5_2:14755092-14755111 | None:intergenic | 45.0% | |
| TAGAGAAGGCCCCTCATAAA+TGG | + | chr5_2:14755093-14755112 | None:intergenic | 45.0% | |
| !!! | AAAAAAAAAGTATATATAAT+AGG | + | chr5_2:14752806-14752825 | None:intergenic | 5.0% |
| !!! | ATTATATATACTTTTTTTTT+TGG | - | chr5_2:14752806-14752825 | Msa0759230:CDS | 5.0% |
| !!! | TTATATATACTTTTTTTTTT+GGG | - | chr5_2:14752807-14752826 | Msa0759230:CDS | 5.0% |
| TGGAGAGGATTCCGAAAACG+AGG | + | chr5_2:14750460-14750479 | None:intergenic | 50.0% | |
| !! | GACGGTGTTATGGACAATGG+AGG | + | chr5_2:14750525-14750544 | None:intergenic | 50.0% |
| AACGGCCTTAGTCAAGGTTG+TGG | - | chr5_2:14751569-14751588 | Msa0759230:intron | 50.0% | |
| TAGCAGCCTCAAACTCTAGG+AGG | - | chr5_2:14751750-14751769 | Msa0759230:CDS | 50.0% | |
| ! | AGCAGCCTCAAACTCTAGGA+GGG | - | chr5_2:14751751-14751770 | Msa0759230:CDS | 50.0% |
| CTGGAAAGAGCAAAGACAGC+AGG | - | chr5_2:14752548-14752567 | Msa0759230:intron | 50.0% | |
| !! | CTCTGGAACATTTCTGGCCA+GGG | - | chr5_2:14752704-14752723 | Msa0759230:intron | 50.0% |
| !! | TCTGGAACATTTCTGGCCAG+GGG | - | chr5_2:14752705-14752724 | Msa0759230:intron | 50.0% |
| CACAATCTTATCACGTCCCC+TGG | + | chr5_2:14752724-14752743 | None:intergenic | 50.0% | |
| GGGGACGTGATAAGATTGTG+AGG | - | chr5_2:14752724-14752743 | Msa0759230:intron | 50.0% | |
| AGGTGGGGTTACTTACCTAC+AGG | + | chr5_2:14752786-14752805 | None:intergenic | 50.0% | |
| ACAGTGTTCCCTGCTGCTAA+GGG | - | chr5_2:14753525-14753544 | Msa0759230:intron | 50.0% | |
| CTGAAATTCCCCTTAGCAGC+AGG | + | chr5_2:14753537-14753556 | None:intergenic | 50.0% | |
| ! | TCAACGGGCTTTCACAGTAG+AGG | - | chr5_2:14753801-14753820 | Msa0759230:intron | 50.0% |
| CGTTGCACTATTGCATAGGC+TGG | + | chr5_2:14754175-14754194 | None:intergenic | 50.0% | |
| GAAACGTTTGCAGCGTGATG+CGG | - | chr5_2:14754872-14754891 | Msa0759230:CDS | 50.0% | |
| AAACGTTTGCAGCGTGATGC+GGG | - | chr5_2:14754873-14754892 | Msa0759230:CDS | 50.0% | |
| ATGAGCTCGGAGCAAAAAGC+TGG | + | chr5_2:14755028-14755047 | None:intergenic | 50.0% | |
| ATACACGGGGCAAATGAGCT+CGG | + | chr5_2:14755041-14755060 | None:intergenic | 50.0% | |
| GTTACGACTAGGTAGAGGGG+TGG | + | chr5_2:14750245-14750264 | None:intergenic | 55.0% | |
| TGTAGAGTGCGTACGAGCTC+TGG | - | chr5_2:14752687-14752706 | Msa0759230:intron | 55.0% | |
| !! | GCTCTGGAACATTTCTGGCC+AGG | - | chr5_2:14752703-14752722 | Msa0759230:intron | 55.0% |
| GACAGTGTTCCCTGCTGCTA+AGG | - | chr5_2:14753524-14753543 | Msa0759230:intron | 55.0% | |
| CAGTGTTCCCTGCTGCTAAG+GGG | - | chr5_2:14753526-14753545 | Msa0759230:intron | 55.0% | |
| TGTGCTGCCTTCTGCGTCAA+CGG | - | chr5_2:14753785-14753804 | Msa0759230:intron | 55.0% | |
| TGAAAGCCCGTTGACGCAGA+AGG | + | chr5_2:14753795-14753814 | None:intergenic | 55.0% | |
| AACGTTTGCAGCGTGATGCG+GGG | - | chr5_2:14754874-14754893 | Msa0759230:CDS | 55.0% | |
| GTGCTGCCTTCTGCGTCAAC+GGG | - | chr5_2:14753786-14753805 | Msa0759230:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 14750187 | 14755114 | 14750187 | ID=Msa0759230;Name=Msa0759230 |
| chr5_2 | mRNA | 14750187 | 14755114 | 14750187 | ID=Msa0759230-mRNA-1;Parent=Msa0759230;Name=Msa0759230-mRNA-1;_AED=0.09;_eAED=0.09;_QI=166|0.85|0.75|1|0.57|0.75|8|337|284 |
| chr5_2 | exon | 14750187 | 14750507 | 14750187 | ID=Msa0759230-mRNA-1:exon:6714;Parent=Msa0759230-mRNA-1 |
| chr5_2 | exon | 14751350 | 14751439 | 14751350 | ID=Msa0759230-mRNA-1:exon:6713;Parent=Msa0759230-mRNA-1 |
| chr5_2 | exon | 14751614 | 14751801 | 14751614 | ID=Msa0759230-mRNA-1:exon:6712;Parent=Msa0759230-mRNA-1 |
| chr5_2 | exon | 14751898 | 14752061 | 14751898 | ID=Msa0759230-mRNA-1:exon:6711;Parent=Msa0759230-mRNA-1 |
| chr5_2 | exon | 14752561 | 14752609 | 14752561 | ID=Msa0759230-mRNA-1:exon:6710;Parent=Msa0759230-mRNA-1 |
| chr5_2 | exon | 14752732 | 14752829 | 14752732 | ID=Msa0759230-mRNA-1:exon:6709;Parent=Msa0759230-mRNA-1 |
| chr5_2 | exon | 14754586 | 14754670 | 14754586 | ID=Msa0759230-mRNA-1:exon:6708;Parent=Msa0759230-mRNA-1 |
| chr5_2 | exon | 14754752 | 14755114 | 14754752 | ID=Msa0759230-mRNA-1:exon:6707;Parent=Msa0759230-mRNA-1 |
| chr5_2 | five_prime_UTR | 14754949 | 14755114 | 14754949 | ID=Msa0759230-mRNA-1:five_prime_utr;Parent=Msa0759230-mRNA-1 |
| chr5_2 | CDS | 14754752 | 14754948 | 14754752 | ID=Msa0759230-mRNA-1:cds;Parent=Msa0759230-mRNA-1 |
| chr5_2 | CDS | 14754586 | 14754670 | 14754586 | ID=Msa0759230-mRNA-1:cds;Parent=Msa0759230-mRNA-1 |
| chr5_2 | CDS | 14752732 | 14752829 | 14752732 | ID=Msa0759230-mRNA-1:cds;Parent=Msa0759230-mRNA-1 |
| chr5_2 | CDS | 14752561 | 14752609 | 14752561 | ID=Msa0759230-mRNA-1:cds;Parent=Msa0759230-mRNA-1 |
| chr5_2 | CDS | 14751898 | 14752061 | 14751898 | ID=Msa0759230-mRNA-1:cds;Parent=Msa0759230-mRNA-1 |
| chr5_2 | CDS | 14751614 | 14751801 | 14751614 | ID=Msa0759230-mRNA-1:cds;Parent=Msa0759230-mRNA-1 |
| chr5_2 | CDS | 14751366 | 14751439 | 14751366 | ID=Msa0759230-mRNA-1:cds;Parent=Msa0759230-mRNA-1 |
| chr5_2 | three_prime_UTR | 14751350 | 14751365 | 14751350 | ID=Msa0759230-mRNA-1:three_prime_utr;Parent=Msa0759230-mRNA-1 |
| chr5_2 | three_prime_UTR | 14750187 | 14750507 | 14750187 | ID=Msa0759230-mRNA-1:three_prime_utr;Parent=Msa0759230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
