Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770090 | sp|Q9SX29|CLPS1_ARATH | 71.069 | 159 | 43 | 2 | 1 | 156 | 1 | 159 | 3.70e-81 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770090 | G7JYE1 | 97.436 | 156 | 4 | 0 | 1 | 156 | 1 | 156 | 8.36e-109 | 315 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043500 | Msa0770090 | -0.805651 | 1.204553e-49 | -8.615850e-47 |
| Msa0045550 | Msa0770090 | -0.805016 | 1.636156e-49 | -8.615850e-47 |
| Msa0055070 | Msa0770090 | -0.821250 | 4.460896e-53 | -8.615850e-47 |
| Msa0101020 | Msa0770090 | -0.814607 | 1.413758e-51 | -8.615850e-47 |
| Msa0618950 | Msa0770090 | -0.806920 | 6.506535e-50 | -8.615850e-47 |
| Msa0652690 | Msa0770090 | -0.829361 | 5.373440e-55 | -8.615850e-47 |
| Msa0658590 | Msa0770090 | -0.829550 | 4.835479e-55 | -8.615850e-47 |
| Msa0659550 | Msa0770090 | -0.825341 | 4.941179e-54 | -8.615850e-47 |
| Msa0705390 | Msa0770090 | -0.801614 | 8.285755e-49 | -8.615850e-47 |
| Msa0744100 | Msa0770090 | -0.800683 | 1.284412e-48 | -8.615850e-47 |
| Msa0750250 | Msa0770090 | -0.808101 | 3.654247e-50 | -8.615850e-47 |
| Msa0770090 | Msa0849110 | 0.942027 | 1.483711e-101 | -8.615850e-47 |
| Msa0770090 | Msa0853950 | -0.809626 | 1.724604e-50 | -8.615850e-47 |
| Msa0770090 | Msa0937430 | -0.802134 | 6.478858e-49 | -8.615850e-47 |
| Msa0770090 | Msa0945240 | -0.839676 | 1.373801e-57 | -8.615850e-47 |
| Msa0770090 | Msa0980940 | -0.804133 | 2.500330e-49 | -8.615850e-47 |
| Msa0770090 | Msa1132480 | -0.812568 | 3.971775e-51 | -8.615850e-47 |
| Msa0770090 | Msa1158230 | -0.802013 | 6.860564e-49 | -8.615850e-47 |
| Msa0770090 | Msa1226470 | -0.821896 | 3.163877e-53 | -8.615850e-47 |
| Msa0770090 | Msa1348650 | 0.817657 | 2.943214e-52 | -8.615850e-47 |
| Msa0770090 | Msa1357080 | -0.805561 | 1.257956e-49 | -8.615850e-47 |
| Msa0770090 | Msa1359560 | -0.808381 | 3.184724e-50 | -8.615850e-47 |
| Msa0770090 | Msa1385810 | -0.802163 | 6.390569e-49 | -8.615850e-47 |
| Msa0770090 | Msa1410420 | -0.822114 | 2.817058e-53 | -8.615850e-47 |
| Msa0770090 | Msa1413380 | -0.802738 | 4.866231e-49 | -8.615850e-47 |
| Msa0770090 | Msa1454530 | -0.823255 | 1.528592e-53 | -8.615850e-47 |
| Msa0145110 | Msa0770090 | -0.819104 | 1.383604e-52 | -8.615850e-47 |
| Msa0146080 | Msa0770090 | -0.801274 | 9.727548e-49 | -8.615850e-47 |
| Msa0198520 | Msa0770090 | -0.802296 | 6.000241e-49 | -8.615850e-47 |
| Msa0198530 | Msa0770090 | -0.803040 | 4.214288e-49 | -8.615850e-47 |
| Msa0210260 | Msa0770090 | -0.801204 | 1.005627e-48 | -8.615850e-47 |
| Msa0378970 | Msa0770090 | -0.827449 | 1.554661e-54 | -8.615850e-47 |
| Msa0428580 | Msa0770090 | -0.812369 | 4.390066e-51 | -8.615850e-47 |
| Msa0443430 | Msa0770090 | -0.812071 | 5.097168e-51 | -8.615850e-47 |
| Msa0474940 | Msa0770090 | -0.825017 | 5.893906e-54 | -8.615850e-47 |
| Msa0480780 | Msa0770090 | -0.837685 | 4.492581e-57 | -8.615850e-47 |
| Msa0244980 | Msa0770090 | -0.801395 | 9.188548e-49 | -8.615850e-47 |
| Msa0322240 | Msa0770090 | -0.804409 | 2.190589e-49 | -8.615850e-47 |
| Msa0347950 | Msa0770090 | -0.803511 | 3.366835e-49 | -8.615850e-47 |
| Msa0347990 | Msa0770090 | -0.820783 | 5.714944e-53 | -8.615850e-47 |
| Msa0489660 | Msa0770090 | -0.808543 | 2.940912e-50 | -8.615850e-47 |
| Msa0514610 | Msa0770090 | -0.824288 | 8.753881e-54 | -8.615850e-47 |
| Msa0518030 | Msa0770090 | -0.806034 | 1.000845e-49 | -8.615850e-47 |
| Msa0542470 | Msa0770090 | -0.804588 | 2.010342e-49 | -8.615850e-47 |
| Msa0600070 | Msa0770090 | -0.806458 | 8.146684e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770090 | MtrunA17_Chr5g0422751 | 97.436 | 156 | 4 | 0 | 1 | 156 | 1 | 156 | 1.61e-112 | 315 |
| Msa0770090 | MtrunA17_Chr6g0484911 | 70.667 | 150 | 37 | 3 | 11 | 156 | 60 | 206 | 3.49e-69 | 207 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770090 | AT1G68660.1 | 71.069 | 159 | 43 | 2 | 1 | 156 | 1 | 159 | 3.76e-82 | 239 |
| Msa0770090 | AT1G68660.2 | 55.346 | 159 | 38 | 3 | 1 | 156 | 1 | 129 | 3.30e-55 | 170 |
Find 57 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGTGGCTTTCTCAATAAC+TGG | 0.289306 | 5_2:+40052608 | None:intergenic |
| GAGTGCGATTTGTGGGAGTA+TGG | 0.350184 | 5_2:-40055387 | Msa0770090:CDS |
| TGTATCTTTGTATAATTGAT+TGG | 0.379796 | 5_2:+40055426 | None:intergenic |
| TCAAATCAAATTCAGATTCC+CGG | 0.395114 | 5_2:+40052582 | None:intergenic |
| GATCATTGTATGCAACTTAG+AGG | 0.399829 | 5_2:-40051840 | Msa0770090:CDS |
| AAGGGTGAGATAGAAAATAT+CGG | 0.401255 | 5_2:-40051740 | Msa0770090:three_prime_UTR |
| TATTCATTATTCATAATCAT+AGG | 0.403074 | 5_2:+40051633 | None:intergenic |
| TTGTGCAATATTACACGATA+TGG | 0.414798 | 5_2:+40052011 | None:intergenic |
| GCATTATCAAGGGTCATTCC+AGG | 0.425052 | 5_2:+40051936 | None:intergenic |
| AATGGCTTTAATGCTATTGA+AGG | 0.425213 | 5_2:-40051759 | Msa0770090:three_prime_UTR |
| TCAAATTCAGATTCCCGGCC+TGG | 0.431777 | 5_2:+40052587 | None:intergenic |
| TGATGTTAACTGCATTATCA+AGG | 0.464225 | 5_2:+40051925 | None:intergenic |
| CCCATGGCTGTATTAACAAA+AGG | 0.470418 | 5_2:-40052662 | Msa0770090:CDS |
| CCTGCTATGAAGAGATGGTT+GGG | 0.477514 | 5_2:+40055356 | None:intergenic |
| AGCCATGGGAACACAAAGAT+TGG | 0.479195 | 5_2:+40052676 | None:intergenic |
| CAAATTCAGATTCCCGGCCT+GGG | 0.480296 | 5_2:+40052588 | None:intergenic |
| GCTGTATTAACAAAAGGATC+TGG | 0.483670 | 5_2:-40052656 | Msa0770090:CDS |
| TTCCAATCTTTGTGTTCCCA+TGG | 0.489326 | 5_2:-40052678 | Msa0770090:CDS |
| TGAGAAAGCCACCCCAGGCC+GGG | 0.496954 | 5_2:-40052600 | Msa0770090:CDS |
| TGGTAAAGGAGGAGGAATCC+TGG | 0.496970 | 5_2:-40052636 | Msa0770090:CDS |
| TGTATGCAACTTAGAGGCAA+TGG | 0.502603 | 5_2:-40051834 | Msa0770090:CDS |
| CTCAGTTCAATTGAACCTGC+AGG | 0.507343 | 5_2:-40051807 | Msa0770090:CDS |
| AATGATCTTCAGCATCAGCT+TGG | 0.508043 | 5_2:+40051856 | None:intergenic |
| ATGATCTTCAGCATCAGCTT+GGG | 0.510156 | 5_2:+40051857 | None:intergenic |
| TTCAGATTCCCGGCCTGGGG+TGG | 0.510475 | 5_2:+40052592 | None:intergenic |
| CCCAACCATCTCTTCATAGC+AGG | 0.515429 | 5_2:-40055356 | Msa0770090:intron |
| TAGCATTAAAGCCATTGAAA+AGG | 0.518320 | 5_2:+40051766 | None:intergenic |
| TGAAGAGATGGTTGGGAGAG+AGG | 0.527218 | 5_2:+40055363 | None:intergenic |
| AGGGTGAGATAGAAAATATC+GGG | 0.530613 | 5_2:-40051739 | Msa0770090:three_prime_UTR |
| ACCTGCTATGAAGAGATGGT+TGG | 0.533059 | 5_2:+40055355 | None:intergenic |
| AGATGAAGAGTGCGATTTGT+GGG | 0.533174 | 5_2:-40055394 | Msa0770090:CDS |
| TTGAGAAAGCCACCCCAGGC+CGG | 0.534808 | 5_2:-40052601 | Msa0770090:CDS |
| AGTGCGATTTGTGGGAGTAT+GGG | 0.535715 | 5_2:-40055386 | Msa0770090:CDS |
| GGATCACCTTCATAAGTACT+TGG | 0.538715 | 5_2:+40051958 | None:intergenic |
| TTAACAAAAGGATCTGGTAA+AGG | 0.546310 | 5_2:-40052650 | Msa0770090:CDS |
| AGAGACCTGCTATGAAGAGA+TGG | 0.546313 | 5_2:+40055351 | None:intergenic |
| AAAGGATCTGGTAAAGGAGG+AGG | 0.553268 | 5_2:-40052644 | Msa0770090:CDS |
| CTAAGATGTGCAGGAAATCA+CGG | 0.554342 | 5_2:-40052046 | Msa0770090:intron |
| CATCAGCAACCATCACCTGC+AGG | 0.555211 | 5_2:+40051792 | None:intergenic |
| TGTTGTCCAAGTACTTATGA+AGG | 0.564357 | 5_2:-40051964 | Msa0770090:CDS |
| GAGATGAAGAGTGCGATTTG+TGG | 0.564782 | 5_2:-40055395 | Msa0770090:CDS |
| GTACTTATGAAGGTGATCCC+TGG | 0.569299 | 5_2:-40051954 | Msa0770090:CDS |
| ATGGCTTTAATGCTATTGAA+GGG | 0.572328 | 5_2:-40051758 | Msa0770090:three_prime_UTR |
| GTTATTGAGAAAGCCACCCC+AGG | 0.591201 | 5_2:-40052605 | Msa0770090:CDS |
| ACAAAAGGATCTGGTAAAGG+AGG | 0.594291 | 5_2:-40052647 | Msa0770090:CDS |
| TCAATTGAACCTGCAGGTGA+TGG | 0.594938 | 5_2:-40051801 | Msa0770090:CDS |
| CATTATCAAGGGTCATTCCA+GGG | 0.602128 | 5_2:+40051937 | None:intergenic |
| GATGTTAACTGCATTATCAA+GGG | 0.610327 | 5_2:+40051926 | None:intergenic |
| CAATGACAACTTCAACAGAC+GGG | 0.612734 | 5_2:-40051991 | Msa0770090:CDS |
| TGCAATATTACACGATATGG+CGG | 0.626220 | 5_2:+40052014 | None:intergenic |
| GAACACAAAGATTGGAACAT+GGG | 0.628706 | 5_2:+40052684 | None:intergenic |
| ACAATGACAACTTCAACAGA+CGG | 0.629056 | 5_2:-40051992 | Msa0770090:CDS |
| ATGCAAGAAGCTCACCACAA+TGG | 0.636426 | 5_2:-40051903 | Msa0770090:CDS |
| GGAACACAAAGATTGGAACA+TGG | 0.638983 | 5_2:+40052683 | None:intergenic |
| AAATTCAGATTCCCGGCCTG+GGG | 0.643776 | 5_2:+40052589 | None:intergenic |
| TCACCACAATGGAATGTCAG+TGG | 0.665125 | 5_2:-40051892 | Msa0770090:CDS |
| TCACCACTGACATTCCATTG+TGG | 0.707546 | 5_2:+40051889 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTAATTAATTTTACATT+TGG | - | chr5_2:40051801-40051820 | Msa0770090:CDS | 10.0% |
| !! | ATATATATATAATTAGAGAT+TGG | + | chr5_2:40052566-40052585 | None:intergenic | 10.0% |
| !!! | TTTATTTATTTTTTTCACAT+AGG | - | chr5_2:40053109-40053128 | Msa0770090:intron | 10.0% |
| !!! | TTATTTATTTTTTTCACATA+GGG | - | chr5_2:40053110-40053129 | Msa0770090:intron | 10.0% |
| !!! | CTCTTTAGTTTTTAATTAAA+GGG | + | chr5_2:40052099-40052118 | None:intergenic | 15.0% |
| !!! | TCTCTTTAGTTTTTAATTAA+AGG | + | chr5_2:40052100-40052119 | None:intergenic | 15.0% |
| !! | ATTTGTAATTGTATACATTT+AGG | - | chr5_2:40052133-40052152 | Msa0770090:intron | 15.0% |
| !! | TTATAAAAGAAAAGATAAGA+AGG | + | chr5_2:40053615-40053634 | None:intergenic | 15.0% |
| !!! | ATTATATCAAGCTTTTATAT+AGG | - | chr5_2:40053809-40053828 | Msa0770090:intron | 15.0% |
| !! | AACATTTATCAAAATTTGAA+AGG | - | chr5_2:40054017-40054036 | Msa0770090:intron | 15.0% |
| !! | ATTCTTAATCTTATTACATT+AGG | - | chr5_2:40054576-40054595 | Msa0770090:intron | 15.0% |
| !!! | AAATTTATGATGATTTTCAA+TGG | - | chr5_2:40054652-40054671 | Msa0770090:intron | 15.0% |
| !!! | AATTTATGATGATTTTCAAT+GGG | - | chr5_2:40054653-40054672 | Msa0770090:intron | 15.0% |
| !!! | TTTTTCTTTGTTTTTTTAAG+GGG | + | chr5_2:40055348-40055367 | None:intergenic | 15.0% |
| !!! | GTTTTTCTTTGTTTTTTTAA+GGG | + | chr5_2:40055349-40055368 | None:intergenic | 15.0% |
| !!! | TGTTTTTCTTTGTTTTTTTA+AGG | + | chr5_2:40055350-40055369 | None:intergenic | 15.0% |
| !! | TATTCATTATTCATAATCAT+AGG | + | chr5_2:40055419-40055438 | None:intergenic | 15.0% |
| !!! | TATAATAAAACTTTTATAGC+TGG | - | chr5_2:40055442-40055461 | Msa0770090:five_prime_UTR | 15.0% |
| !! | TGTATCTTTGTATAATTGAT+TGG | + | chr5_2:40051626-40051645 | None:intergenic | 20.0% |
| !!! | TTAATTTTACATGTGCTTTA+TGG | - | chr5_2:40051758-40051777 | Msa0770090:three_prime_UTR | 20.0% |
| !!! | TTAATTTTACATTTGGTTCA+AGG | - | chr5_2:40051808-40051827 | Msa0770090:CDS | 20.0% |
| !!! | TAATTTTACATTTGGTTCAA+GGG | - | chr5_2:40051809-40051828 | Msa0770090:CDS | 20.0% |
| !! | GGATTAAATTTAAACCTTTA+GGG | - | chr5_2:40051830-40051849 | Msa0770090:CDS | 20.0% |
| !!! | TTGTGCTATTTTATCATATA+TGG | - | chr5_2:40051939-40051958 | Msa0770090:CDS | 20.0% |
| !! | TTAAAAACTAAAGAGACATT+TGG | - | chr5_2:40052104-40052123 | Msa0770090:intron | 20.0% |
| !! | TAAAAACTAAAGAGACATTT+GGG | - | chr5_2:40052105-40052124 | Msa0770090:intron | 20.0% |
| !!! | TTTAAGAATTCTTTGGTTTA+CGG | - | chr5_2:40052255-40052274 | Msa0770090:intron | 20.0% |
| !!! | GTTTCTACCAATTTTTATTA+GGG | + | chr5_2:40053188-40053207 | None:intergenic | 20.0% |
| !! | AAAAATCTTGATCAAAATCA+TGG | - | chr5_2:40053721-40053740 | Msa0770090:intron | 20.0% |
| !! | CAAAATAAAAAAAACTCACT+TGG | - | chr5_2:40053868-40053887 | Msa0770090:intron | 20.0% |
| !! | CTTACTATGAATGTTATATT+GGG | - | chr5_2:40054175-40054194 | Msa0770090:intron | 20.0% |
| !!! | TGTGATTGAAATTTGTTTTT+TGG | - | chr5_2:40054237-40054256 | Msa0770090:intron | 20.0% |
| !! | TTATTAGTGATGATAACTTA+AGG | - | chr5_2:40054682-40054701 | Msa0770090:intron | 20.0% |
| !! | AGTCATTTAGAAAATATGAT+AGG | - | chr5_2:40054824-40054843 | Msa0770090:intron | 20.0% |
| !!! | AAAAAGAAAGTATTTGATTC+TGG | - | chr5_2:40054975-40054994 | Msa0770090:intron | 20.0% |
| ! | TGCTTTATGGTTTATTATGT+GGG | - | chr5_2:40051771-40051790 | Msa0770090:three_prime_UTR | 25.0% |
| ! | GGGATTAAATTTAAACCTTT+AGG | - | chr5_2:40051829-40051848 | Msa0770090:CDS | 25.0% |
| ! | AATTAATTACACTTCCCTAA+AGG | + | chr5_2:40051847-40051866 | None:intergenic | 25.0% |
| ! | AAAATAGCACAACATTAATC+TGG | + | chr5_2:40051931-40051950 | None:intergenic | 25.0% |
| ! | AAAAACTAAAGAGACATTTG+GGG | - | chr5_2:40052106-40052125 | Msa0770090:intron | 25.0% |
| ! | CTAAAACATCAATTTACAAC+GGG | + | chr5_2:40052214-40052233 | None:intergenic | 25.0% |
| ! | GCTAAAACATCAATTTACAA+CGG | + | chr5_2:40052215-40052234 | None:intergenic | 25.0% |
| ! | TAGTGAGTTTAAGAATTCTT+TGG | - | chr5_2:40052248-40052267 | Msa0770090:intron | 25.0% |
| !! | ATTGTATTTTCTCTCTTACA+AGG | + | chr5_2:40052521-40052540 | None:intergenic | 25.0% |
| !! | TATAATTAGAGATTGGTCAT+TGG | + | chr5_2:40052559-40052578 | None:intergenic | 25.0% |
| ! | AAAATGAACGATATAGAAAG+TGG | - | chr5_2:40052822-40052841 | Msa0770090:intron | 25.0% |
| !! | ATTTGAAAAAGTAAAGTGCT+TGG | + | chr5_2:40052857-40052876 | None:intergenic | 25.0% |
| !! | GCTTATAAAATGCTTCATTT+TGG | + | chr5_2:40052918-40052937 | None:intergenic | 25.0% |
| !! | GGTTTCTACCAATTTTTATT+AGG | + | chr5_2:40053189-40053208 | None:intergenic | 25.0% |
| !!! | CTCTTTATTTTCTCTTGTTA+CGG | + | chr5_2:40053234-40053253 | None:intergenic | 25.0% |
| ! | AGGTATGAATTGAATGAAAT+AGG | - | chr5_2:40053261-40053280 | Msa0770090:intron | 25.0% |
| ! | GGTATGAATTGAATGAAATA+GGG | - | chr5_2:40053262-40053281 | Msa0770090:intron | 25.0% |
| ! | TTATAAACTCTCCATATCTT+TGG | - | chr5_2:40053629-40053648 | Msa0770090:intron | 25.0% |
| !!! | AATAATAAGAAGGGTACTAT+AGG | + | chr5_2:40053659-40053678 | None:intergenic | 25.0% |
| ! | AATAGAGAACATTACAAAAC+TGG | - | chr5_2:40053744-40053763 | Msa0770090:intron | 25.0% |
| ! | TCAAAATTTGAAAGGATAGT+TGG | - | chr5_2:40054025-40054044 | Msa0770090:intron | 25.0% |
| ! | TCATACACAAATGAAAATGA+AGG | + | chr5_2:40054094-40054113 | None:intergenic | 25.0% |
| ! | TCTTAACTGTCTTAATTACT+TGG | - | chr5_2:40054132-40054151 | Msa0770090:intron | 25.0% |
| ! | ATTCATAGTAAGCATTAACA+GGG | + | chr5_2:40054167-40054186 | None:intergenic | 25.0% |
| ! | GCTTACTATGAATGTTATAT+TGG | - | chr5_2:40054174-40054193 | Msa0770090:intron | 25.0% |
| !! | GACAGATATTCTTTTTGTAA+AGG | - | chr5_2:40054342-40054361 | Msa0770090:intron | 25.0% |
| !!! | TTGTTTTTCTGAATGTGATT+AGG | - | chr5_2:40054551-40054570 | Msa0770090:intron | 25.0% |
| ! | AAGTTATCATCACTAATAAC+TGG | + | chr5_2:40054681-40054700 | None:intergenic | 25.0% |
| !!! | CATCAAGTATTACTTGTTTT+AGG | + | chr5_2:40054735-40054754 | None:intergenic | 25.0% |
| !! | ACAAGTAATACTTGATGTTT+TGG | - | chr5_2:40054738-40054757 | Msa0770090:intron | 25.0% |
| GTGCTTTATGGTTTATTATG+TGG | - | chr5_2:40051770-40051789 | Msa0770090:three_prime_UTR | 30.0% | |
| TTGCACTTTCGATATATTCA+AGG | + | chr5_2:40052017-40052036 | None:intergenic | 30.0% | |
| GGACTAAAAAAACACATTTG+AGG | + | chr5_2:40052078-40052097 | None:intergenic | 30.0% | |
| CTTCACTAAATAATTGACCA+TGG | + | chr5_2:40052363-40052382 | None:intergenic | 30.0% | |
| TTGAGTATGTTGAGAATTTG+CGG | - | chr5_2:40052385-40052404 | Msa0770090:intron | 30.0% | |
| ATGGGAACCCTAATAAAAAT+TGG | - | chr5_2:40053178-40053197 | Msa0770090:intron | 30.0% | |
| ! | TTATTTTCTCTTGTTACGGT+TGG | + | chr5_2:40053230-40053249 | None:intergenic | 30.0% |
| AGAAAATAAAGAGCGAGAAT+AGG | - | chr5_2:40053241-40053260 | Msa0770090:intron | 30.0% | |
| ! | AGGAGTAATAGTCTTTTAGA+GGG | + | chr5_2:40053421-40053440 | None:intergenic | 30.0% |
| ! | TAGGAGTAATAGTCTTTTAG+AGG | + | chr5_2:40053422-40053441 | None:intergenic | 30.0% |
| CTCTTTAGTAGTATTTACGT+AGG | + | chr5_2:40053441-40053460 | None:intergenic | 30.0% | |
| AAGAGATAAACCTACTTCTA+AGG | - | chr5_2:40053456-40053475 | Msa0770090:intron | 30.0% | |
| AGAGATAAACCTACTTCTAA+GGG | - | chr5_2:40053457-40053476 | Msa0770090:intron | 30.0% | |
| CTATAGGAATACCAAAGATA+TGG | + | chr5_2:40053643-40053662 | None:intergenic | 30.0% | |
| GTGAACGCTAATAATAAGAA+GGG | + | chr5_2:40053668-40053687 | None:intergenic | 30.0% | |
| TGTGAACGCTAATAATAAGA+AGG | + | chr5_2:40053669-40053688 | None:intergenic | 30.0% | |
| CATATGTCAAATTGTTCACA+AGG | - | chr5_2:40053967-40053986 | Msa0770090:intron | 30.0% | |
| CATTCATAGTAAGCATTAAC+AGG | + | chr5_2:40054168-40054187 | None:intergenic | 30.0% | |
| TTCTTGAACATTTGCATTAC+AGG | - | chr5_2:40054318-40054337 | Msa0770090:intron | 30.0% | |
| TCTTGAACATTTGCATTACA+GGG | - | chr5_2:40054319-40054338 | Msa0770090:intron | 30.0% | |
| TTAACAAAAGGATCTGGTAA+AGG | - | chr5_2:40054399-40054418 | Msa0770090:intron | 30.0% | |
| TCAAATCAAATTCAGATTCC+CGG | + | chr5_2:40054470-40054489 | None:intergenic | 30.0% | |
| CAAGTATCTTCAAATGTCAA+TGG | + | chr5_2:40054617-40054636 | None:intergenic | 30.0% | |
| !! | AGATACTTGTTATTGTGCAA+TGG | - | chr5_2:40054628-40054647 | Msa0770090:intron | 30.0% |
| !! | GATACTTGTTATTGTGCAAT+GGG | - | chr5_2:40054629-40054648 | Msa0770090:intron | 30.0% |
| !! | TATGATAGGATTTTTAAGCG+TGG | - | chr5_2:40054838-40054857 | Msa0770090:intron | 30.0% |
| CTTAACGATGAAATTGAAGT+TGG | - | chr5_2:40054863-40054882 | Msa0770090:intron | 30.0% | |
| TTGTGCAATATTACACGATA+TGG | + | chr5_2:40055041-40055060 | None:intergenic | 30.0% | |
| GATGTTAACTGCATTATCAA+GGG | + | chr5_2:40055126-40055145 | None:intergenic | 30.0% | |
| TGATGTTAACTGCATTATCA+AGG | + | chr5_2:40055127-40055146 | None:intergenic | 30.0% | |
| TAGCATTAAAGCCATTGAAA+AGG | + | chr5_2:40055286-40055305 | None:intergenic | 30.0% | |
| !! | AATGGCTTTAATGCTATTGA+AGG | - | chr5_2:40055290-40055309 | Msa0770090:intron | 30.0% |
| !! | ATGGCTTTAATGCTATTGAA+GGG | - | chr5_2:40055291-40055310 | Msa0770090:intron | 30.0% |
| AAGGGTGAGATAGAAAATAT+CGG | - | chr5_2:40055309-40055328 | Msa0770090:intron | 30.0% | |
| ! | CAACGGGTAAATAGTCATTT+TGG | + | chr5_2:40052198-40052217 | None:intergenic | 35.0% |
| ! | GAATTCTTTGGTTTACGGTT+AGG | - | chr5_2:40052260-40052279 | Msa0770090:intron | 35.0% |
| ! | GCGGCAAATGAAATTTTATC+TGG | - | chr5_2:40052404-40052423 | Msa0770090:intron | 35.0% |
| !! | GAAGTTGAGCATTTTGTTGT+TGG | - | chr5_2:40052439-40052458 | Msa0770090:intron | 35.0% |
| ! | GTGACAAAACTTGATGATAG+AGG | - | chr5_2:40052495-40052514 | Msa0770090:intron | 35.0% |
| ! | TAGCTAGAGATTGGTTAAGT+TGG | + | chr5_2:40052689-40052708 | None:intergenic | 35.0% |
| GTTGTTAAGTAGCTAGAGAT+TGG | + | chr5_2:40052698-40052717 | None:intergenic | 35.0% | |
| TTAACCAACAAGCTCAAATC+TGG | - | chr5_2:40052963-40052982 | Msa0770090:intron | 35.0% | |
| ATCTGGCAAAAAACCAACAT+AGG | - | chr5_2:40052980-40052999 | Msa0770090:intron | 35.0% | |
| TCTGGCAAAAAACCAACATA+GGG | - | chr5_2:40052981-40053000 | Msa0770090:intron | 35.0% | |
| ! | TTGTTCGCAAGATTTCAAGT+CGG | + | chr5_2:40053057-40053076 | None:intergenic | 35.0% |
| ATCTTTATGACTTACCCTGA+TGG | - | chr5_2:40053159-40053178 | Msa0770090:intron | 35.0% | |
| TCTTTATGACTTACCCTGAT+GGG | - | chr5_2:40053160-40053179 | Msa0770090:intron | 35.0% | |
| ! | TTTTATTAGGGTTCCCATCA+GGG | + | chr5_2:40053176-40053195 | None:intergenic | 35.0% |
| ! | TTTTTATTAGGGTTCCCATC+AGG | + | chr5_2:40053177-40053196 | None:intergenic | 35.0% |
| TGGTTATCGTTCAGATCTAT+TGG | + | chr5_2:40053210-40053229 | None:intergenic | 35.0% | |
| ! | CAGATTGAGTTTTCTGTTCA+GGG | + | chr5_2:40053394-40053413 | None:intergenic | 35.0% |
| ! | ACAGATTGAGTTTTCTGTTC+AGG | + | chr5_2:40053395-40053414 | None:intergenic | 35.0% |
| AGAGTTTATCCCTTAGAAGT+AGG | + | chr5_2:40053469-40053488 | None:intergenic | 35.0% | |
| AGACACCCTATAGTTTACTA+AGG | - | chr5_2:40053562-40053581 | Msa0770090:intron | 35.0% | |
| AGGAGCCTTAGTAAACTATA+GGG | + | chr5_2:40053570-40053589 | None:intergenic | 35.0% | |
| AGAAAAGATAAGAAGGCTAG+TGG | + | chr5_2:40053608-40053627 | None:intergenic | 35.0% | |
| AAACATGTGAAGTGTACACA+AGG | + | chr5_2:40054065-40054084 | None:intergenic | 35.0% | |
| CATATGCATAAGATGAGAGA+AGG | + | chr5_2:40054274-40054293 | None:intergenic | 35.0% | |
| CTTCTCTCATCTTATGCATA+TGG | - | chr5_2:40054272-40054291 | Msa0770090:intron | 35.0% | |
| CTTGAACATTTGCATTACAG+GGG | - | chr5_2:40054320-40054339 | Msa0770090:intron | 35.0% | |
| GAACACAAAGATTGGAACAT+GGG | + | chr5_2:40054368-40054387 | None:intergenic | 35.0% | |
| ! | CCTTTTGTTAATACAGCCAT+GGG | + | chr5_2:40054390-40054409 | None:intergenic | 35.0% |
| ! | TCCTTTTGTTAATACAGCCA+TGG | + | chr5_2:40054391-40054410 | None:intergenic | 35.0% |
| GCTGTATTAACAAAAGGATC+TGG | - | chr5_2:40054393-40054412 | Msa0770090:intron | 35.0% | |
| ATGTCATCGCATGTAGTAAA+AGG | - | chr5_2:40054706-40054725 | Msa0770090:intron | 35.0% | |
| TGCAATATTACACGATATGG+CGG | + | chr5_2:40055038-40055057 | None:intergenic | 35.0% | |
| ACAATGACAACTTCAACAGA+CGG | - | chr5_2:40055057-40055076 | Msa0770090:intron | 35.0% | |
| TGTTGTCCAAGTACTTATGA+AGG | - | chr5_2:40055085-40055104 | Msa0770090:intron | 35.0% | |
| GATCATTGTATGCAACTTAG+AGG | - | chr5_2:40055209-40055228 | Msa0770090:intron | 35.0% | |
| AGGGTGAGATAGAAAATATC+GGG | - | chr5_2:40055310-40055329 | Msa0770090:intron | 35.0% | |
| ! | AGATGAAGAGTGCGATTTGT+GGG | - | chr5_2:40051655-40051674 | Msa0770090:three_prime_UTR | 40.0% |
| AGCAAAACCAGTTACACATG+TGG | - | chr5_2:40051894-40051913 | Msa0770090:CDS | 40.0% | |
| GCTAAAACCACATGTGTAAC+TGG | + | chr5_2:40051904-40051923 | None:intergenic | 40.0% | |
| ! | TTTTAGTCCCTGAATGTGTG+AGG | - | chr5_2:40051975-40051994 | Msa0770090:CDS | 40.0% |
| ! | CACACTCACAATTTTTGCCA+TGG | - | chr5_2:40052343-40052362 | Msa0770090:intron | 40.0% |
| TATAAGAACTCCCTGCAAAC+TGG | - | chr5_2:40052645-40052664 | Msa0770090:CDS | 40.0% | |
| CAAACCAACTAAACCACCTA+AGG | - | chr5_2:40052720-40052739 | Msa0770090:intron | 40.0% | |
| GTGGTCGGTGTAGATATTAT+CGG | + | chr5_2:40052761-40052780 | None:intergenic | 40.0% | |
| GTCCTCTTCTATAATGTGGT+CGG | + | chr5_2:40052776-40052795 | None:intergenic | 40.0% | |
| GTTGGTCCTCTTCTATAATG+TGG | + | chr5_2:40052780-40052799 | None:intergenic | 40.0% | |
| TTTCATGTGCACTGAGTACA+GGG | + | chr5_2:40052803-40052822 | None:intergenic | 40.0% | |
| ! | TTTTCATGTGCACTGAGTAC+AGG | + | chr5_2:40052804-40052823 | None:intergenic | 40.0% |
| !!! | TTTTGGCTCAATCAGCTGTA+GGG | + | chr5_2:40052901-40052920 | None:intergenic | 40.0% |
| !!! | ATTTTGGCTCAATCAGCTGT+AGG | + | chr5_2:40052902-40052921 | None:intergenic | 40.0% |
| AATGTGGCATGTGAGTTTCA+TGG | + | chr5_2:40052940-40052959 | None:intergenic | 40.0% | |
| ! | GCTTGTTGGTTAACACAATG+TGG | + | chr5_2:40052956-40052975 | None:intergenic | 40.0% |
| TTTGCCAGATTTGAGCTTGT+TGG | + | chr5_2:40052970-40052989 | None:intergenic | 40.0% | |
| ATTCTTGAGGTTTGTGGTTG+AGG | + | chr5_2:40053011-40053030 | None:intergenic | 40.0% | |
| CATGTGATTCTTGAGGTTTG+TGG | + | chr5_2:40053017-40053036 | None:intergenic | 40.0% | |
| CACAAACCTCAAGAATCACA+TGG | - | chr5_2:40053015-40053034 | Msa0770090:intron | 40.0% | |
| TGCGAACAAGAAGTTGAAGT+TGG | - | chr5_2:40053068-40053087 | Msa0770090:intron | 40.0% | |
| AAGATTAATCGCAACCACTC+AGG | + | chr5_2:40053144-40053163 | None:intergenic | 40.0% | |
| GAGGAGCCTTAGTAAACTAT+AGG | + | chr5_2:40053571-40053590 | None:intergenic | 40.0% | |
| GTTCACATCATACCCCAATA+GGG | - | chr5_2:40053682-40053701 | Msa0770090:intron | 40.0% | |
| TTCTTCTCCTATCCCTATTG+GGG | + | chr5_2:40053697-40053716 | None:intergenic | 40.0% | |
| CTTCTTCTCCTATCCCTATT+GGG | + | chr5_2:40053698-40053717 | None:intergenic | 40.0% | |
| TTGTTCACAAGGCTATGTCT+AGG | - | chr5_2:40053978-40053997 | Msa0770090:intron | 40.0% | |
| TAAGATGAGAGAAGGTCTTG+TGG | + | chr5_2:40054266-40054285 | None:intergenic | 40.0% | |
| GGAACACAAAGATTGGAACA+TGG | + | chr5_2:40054369-40054388 | None:intergenic | 40.0% | |
| TTCCAATCTTTGTGTTCCCA+TGG | - | chr5_2:40054371-40054390 | Msa0770090:intron | 40.0% | |
| CCCATGGCTGTATTAACAAA+AGG | - | chr5_2:40054387-40054406 | Msa0770090:intron | 40.0% | |
| ACAAAAGGATCTGGTAAAGG+AGG | - | chr5_2:40054402-40054421 | Msa0770090:intron | 40.0% | |
| !!! | TCTCAATAACTGGCTTTTCC+AGG | + | chr5_2:40054434-40054453 | None:intergenic | 40.0% |
| CGACAACTAAATCACTACAG+TGG | + | chr5_2:40054893-40054912 | None:intergenic | 40.0% | |
| ! | TGTTGTTCTGTTGTGCTGAT+TGG | - | chr5_2:40054913-40054932 | Msa0770090:intron | 40.0% |
| CTAAGATGTGCAGGAAATCA+CGG | - | chr5_2:40055003-40055022 | Msa0770090:intron | 40.0% | |
| CAATGACAACTTCAACAGAC+GGG | - | chr5_2:40055058-40055077 | Msa0770090:intron | 40.0% | |
| GGATCACCTTCATAAGTACT+TGG | + | chr5_2:40055094-40055113 | None:intergenic | 40.0% | |
| CATTATCAAGGGTCATTCCA+GGG | + | chr5_2:40055115-40055134 | None:intergenic | 40.0% | |
| ATGATCTTCAGCATCAGCTT+GGG | + | chr5_2:40055195-40055214 | None:intergenic | 40.0% | |
| AATGATCTTCAGCATCAGCT+TGG | + | chr5_2:40055196-40055215 | None:intergenic | 40.0% | |
| TGTATGCAACTTAGAGGCAA+TGG | - | chr5_2:40055215-40055234 | Msa0770090:intron | 40.0% | |
| ! | TGCTGATGACACCTTTTCAA+TGG | - | chr5_2:40055272-40055291 | Msa0770090:intron | 40.0% |
| ! | GAGATGAAGAGTGCGATTTG+TGG | - | chr5_2:40051654-40051673 | Msa0770090:three_prime_UTR | 45.0% |
| ! | AGTGCGATTTGTGGGAGTAT+GGG | - | chr5_2:40051663-40051682 | Msa0770090:three_prime_UTR | 45.0% |
| CCTGCTATGAAGAGATGGTT+GGG | + | chr5_2:40051696-40051715 | None:intergenic | 45.0% | |
| ACCTGCTATGAAGAGATGGT+TGG | + | chr5_2:40051697-40051716 | None:intergenic | 45.0% | |
| AGAGACCTGCTATGAAGAGA+TGG | + | chr5_2:40051701-40051720 | None:intergenic | 45.0% | |
| GACAACACCTCACACATTCA+GGG | + | chr5_2:40051985-40052004 | None:intergenic | 45.0% | |
| TGACAACACCTCACACATTC+AGG | + | chr5_2:40051986-40052005 | None:intergenic | 45.0% | |
| CAAATCCTCGAGTGTGTCTT+GGG | - | chr5_2:40052038-40052057 | Msa0770090:intron | 45.0% | |
| !!! | GTGTCTTGGGTTGGTCATTT+TGG | - | chr5_2:40052051-40052070 | Msa0770090:intron | 45.0% |
| GTTTACGGTTAGGTTTCGCT+CGG | - | chr5_2:40052270-40052289 | Msa0770090:intron | 45.0% | |
| TGAACACCTTCCAGTTTGCA+GGG | + | chr5_2:40052658-40052677 | None:intergenic | 45.0% | |
| CCTTCCTTAGGTGGTTTAGT+TGG | + | chr5_2:40052727-40052746 | None:intergenic | 45.0% | |
| CCAACTAAACCACCTAAGGA+AGG | - | chr5_2:40052724-40052743 | Msa0770090:intron | 45.0% | |
| AAACCACCTAAGGAAGGTCA+CGG | - | chr5_2:40052730-40052749 | Msa0770090:intron | 45.0% | |
| GAATTTCCGTGACCTTCCTT+AGG | + | chr5_2:40052739-40052758 | None:intergenic | 45.0% | |
| CACCGACCACATTATAGAAG+AGG | - | chr5_2:40052771-40052790 | Msa0770090:intron | 45.0% | |
| TTCATGTGCACTGAGTACAG+GGG | + | chr5_2:40052802-40052821 | None:intergenic | 45.0% | |
| ! | TTTGGCTCAATCAGCTGTAG+GGG | + | chr5_2:40052900-40052919 | None:intergenic | 45.0% |
| ! | CGCAAGATTTCAAGTCGGAA+TGG | + | chr5_2:40053052-40053071 | None:intergenic | 45.0% |
| GATTCCTCTCTGAGTTGTGT+CGG | + | chr5_2:40053362-40053381 | None:intergenic | 45.0% | |
| AGTGGCTGAAGTTACTAGTG+AGG | + | chr5_2:40053590-40053609 | None:intergenic | 45.0% | |
| CGTTCACATCATACCCCAAT+AGG | - | chr5_2:40053681-40053700 | Msa0770090:intron | 45.0% | |
| CATCATACCCCAATAGGGAT+AGG | - | chr5_2:40053687-40053706 | Msa0770090:intron | 45.0% | |
| GCTTCTTCTCCTATCCCTAT+TGG | + | chr5_2:40053699-40053718 | None:intergenic | 45.0% | |
| CACTTGGATGACAAGTGCAT+TGG | - | chr5_2:40053884-40053903 | Msa0770090:intron | 45.0% | |
| ATCTGCTGATGTTGAGCTTG+TGG | - | chr5_2:40053935-40053954 | Msa0770090:intron | 45.0% | |
| ! | TGTTGAGCTTGTGGCTCTAT+TGG | - | chr5_2:40053944-40053963 | Msa0770090:intron | 45.0% |
| AGCCATGGGAACACAAAGAT+TGG | + | chr5_2:40054376-40054395 | None:intergenic | 45.0% | |
| AAAGGATCTGGTAAAGGAGG+AGG | - | chr5_2:40054405-40054424 | Msa0770090:intron | 45.0% | |
| !! | CTGGCATTTCTAAGATGTGC+AGG | - | chr5_2:40054994-40055013 | Msa0770090:intron | 45.0% |
| GTACTTATGAAGGTGATCCC+TGG | - | chr5_2:40055095-40055114 | Msa0770090:intron | 45.0% | |
| GCATTATCAAGGGTCATTCC+AGG | + | chr5_2:40055116-40055135 | None:intergenic | 45.0% | |
| ATGCAAGAAGCTCACCACAA+TGG | - | chr5_2:40055146-40055165 | Msa0770090:intron | 45.0% | |
| TCACCACAATGGAATGTCAG+TGG | - | chr5_2:40055157-40055176 | Msa0770090:intron | 45.0% | |
| TCACCACTGACATTCCATTG+TGG | + | chr5_2:40055163-40055182 | None:intergenic | 45.0% | |
| CTCAGTTCAATTGAACCTGC+AGG | - | chr5_2:40055242-40055261 | Msa0770090:intron | 45.0% | |
| TCAATTGAACCTGCAGGTGA+TGG | - | chr5_2:40055248-40055267 | Msa0770090:intron | 45.0% | |
| GAGTGCGATTTGTGGGAGTA+TGG | - | chr5_2:40051662-40051681 | Msa0770090:three_prime_UTR | 50.0% | |
| TGAAGAGATGGTTGGGAGAG+AGG | + | chr5_2:40051689-40051708 | None:intergenic | 50.0% | |
| CCCAACCATCTCTTCATAGC+AGG | - | chr5_2:40051693-40051712 | Msa0770090:three_prime_UTR | 50.0% | |
| GCAAATCCTCGAGTGTGTCT+TGG | - | chr5_2:40052037-40052056 | Msa0770090:intron | 50.0% | |
| AGACGCAGACGCTGTCATTA+TGG | + | chr5_2:40052161-40052180 | None:intergenic | 50.0% | |
| GTCTGCGTCTCGCATATTCA+AGG | - | chr5_2:40052171-40052190 | Msa0770090:intron | 50.0% | |
| AGAACTCCCTGCAAACTGGA+AGG | - | chr5_2:40052649-40052668 | Msa0770090:CDS | 50.0% | |
| GTGAACACCTTCCAGTTTGC+AGG | + | chr5_2:40052659-40052678 | None:intergenic | 50.0% | |
| TTTCCGTGACCTTCCTTAGG+TGG | + | chr5_2:40052736-40052755 | None:intergenic | 50.0% | |
| GGTTGAGGTTTGCCCTATGT+TGG | + | chr5_2:40052996-40053015 | None:intergenic | 50.0% | |
| CCAGAGCCATGTGATTCTTG+AGG | + | chr5_2:40053024-40053043 | None:intergenic | 50.0% | |
| CCTCAAGAATCACATGGCTC+TGG | - | chr5_2:40053021-40053040 | Msa0770090:intron | 50.0% | |
| TTGTGTCGGAGCTTTGCTCT+GGG | + | chr5_2:40053348-40053367 | None:intergenic | 50.0% | |
| CTCAGAGAGGAATCCTACTC+TGG | - | chr5_2:40053368-40053387 | Msa0770090:intron | 50.0% | |
| TTTCTGTTCAGGGCCAGAGT+AGG | + | chr5_2:40053384-40053403 | None:intergenic | 50.0% | |
| TGGTAAAGGAGGAGGAATCC+TGG | - | chr5_2:40054413-40054432 | Msa0770090:intron | 50.0% | |
| GGGGTGGCTTTCTCAATAAC+TGG | + | chr5_2:40054444-40054463 | None:intergenic | 50.0% | |
| GTTATTGAGAAAGCCACCCC+AGG | - | chr5_2:40054444-40054463 | Msa0770090:intron | 50.0% | |
| AAATTCAGATTCCCGGCCTG+GGG | + | chr5_2:40054463-40054482 | None:intergenic | 50.0% | |
| CAAATTCAGATTCCCGGCCT+GGG | + | chr5_2:40054464-40054483 | None:intergenic | 50.0% | |
| TCAAATTCAGATTCCCGGCC+TGG | + | chr5_2:40054465-40054484 | None:intergenic | 50.0% | |
| TCCTCGAGTGTGTCTTGGGT+TGG | - | chr5_2:40052042-40052061 | Msa0770090:intron | 55.0% | |
| ACCAACCCAAGACACACTCG+AGG | + | chr5_2:40052046-40052065 | None:intergenic | 55.0% | |
| TGTGCGCGCGCGCAATTTAT+GGG | + | chr5_2:40052327-40052346 | None:intergenic | 55.0% | |
| TGTGCACTGAGTACAGGGGT+TGG | + | chr5_2:40052798-40052817 | None:intergenic | 55.0% | |
| ATAGGGCAACAGTGCCTGAG+TGG | - | chr5_2:40053127-40053146 | Msa0770090:intron | 55.0% | |
| GTTGTGTCGGAGCTTTGCTC+TGG | + | chr5_2:40053349-40053368 | None:intergenic | 55.0% | |
| AGCTCCGACACAACTCAGAG+AGG | - | chr5_2:40053355-40053374 | Msa0770090:intron | 55.0% | |
| CATCAGCAACCATCACCTGC+AGG | + | chr5_2:40055260-40055279 | None:intergenic | 55.0% | |
| GTGTGCGCGCGCGCAATTTA+TGG | + | chr5_2:40052328-40052347 | None:intergenic | 60.0% | |
| TTGAGAAAGCCACCCCAGGC+CGG | - | chr5_2:40054448-40054467 | Msa0770090:intron | 60.0% | |
| TGAGAAAGCCACCCCAGGCC+GGG | - | chr5_2:40054449-40054468 | Msa0770090:intron | 65.0% | |
| TTCAGATTCCCGGCCTGGGG+TGG | + | chr5_2:40054460-40054479 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 40051600 | 40055471 | 40051600 | ID=Msa0770090;Name=Msa0770090 |
| chr5_2 | mRNA | 40051600 | 40055471 | 40051600 | ID=Msa0770090-mRNA-1;Parent=Msa0770090;Name=Msa0770090-mRNA-1;_AED=0.02;_eAED=0.02;_QI=57|1|1|1|0.5|0.33|3|194|156 |
| chr5_2 | exon | 40051600 | 40052055 | 40051600 | ID=Msa0770090-mRNA-1:exon:12803;Parent=Msa0770090-mRNA-1 |
| chr5_2 | exon | 40052581 | 40052731 | 40052581 | ID=Msa0770090-mRNA-1:exon:12802;Parent=Msa0770090-mRNA-1 |
| chr5_2 | exon | 40055357 | 40055471 | 40055357 | ID=Msa0770090-mRNA-1:exon:12801;Parent=Msa0770090-mRNA-1 |
| chr5_2 | five_prime_UTR | 40055415 | 40055471 | 40055415 | ID=Msa0770090-mRNA-1:five_prime_utr;Parent=Msa0770090-mRNA-1 |
| chr5_2 | CDS | 40055357 | 40055414 | 40055357 | ID=Msa0770090-mRNA-1:cds;Parent=Msa0770090-mRNA-1 |
| chr5_2 | CDS | 40052581 | 40052731 | 40052581 | ID=Msa0770090-mRNA-1:cds;Parent=Msa0770090-mRNA-1 |
| chr5_2 | CDS | 40051794 | 40052055 | 40051794 | ID=Msa0770090-mRNA-1:cds;Parent=Msa0770090-mRNA-1 |
| chr5_2 | three_prime_UTR | 40051600 | 40051793 | 40051600 | ID=Msa0770090-mRNA-1:three_prime_utr;Parent=Msa0770090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
