AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0822320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0822320 MtrunA17_Chr5g0442541 62.170 341 46 4 1 265 1 334 8.72e-131 380
Msa0822320 MtrunA17_Chr5g0442551 68.881 286 44 4 9 265 16 285 1.93e-127 365
Msa0822320 MtrunA17_Chr5g0442581 57.391 345 67 4 1 265 1 345 2.36e-122 361
Msa0822320 MtrunA17_Chr5g0442491 58.017 343 66 5 1 265 1 343 1.18e-120 354
Msa0822320 MtrunA17_Chr5g0442601 57.681 345 66 4 1 265 400 744 1.99e-120 366
Msa0822320 MtrunA17_Chr5g0442601 60.081 248 78 5 31 265 32 271 1.42e-84 272
Msa0822320 MtrunA17_Chr5g0442561 55.718 341 75 3 1 265 1 341 8.03e-119 350
Msa0822320 MtrunA17_Chr5g0442511 56.548 336 57 3 1 265 45 362 2.91e-115 342
Msa0822320 MtrunA17_Chr5g0442521 54.651 344 77 6 1 265 1 344 5.51e-112 332
Msa0822320 MtrunA17_Chr5g0448521 52.493 341 81 5 1 265 1 336 6.08e-108 322
Msa0822320 MtrunA17_Chr5g0442501 54.984 311 66 4 1 237 1 311 5.87e-105 309
Msa0822320 MtrunA17_Chr2g0302961 34.870 347 134 11 1 264 1 338 6.88e-49 169
Msa0822320 MtrunA17_Chr5g0429681 32.840 338 134 10 2 258 41 366 7.22e-46 162
Msa0822320 MtrunA17_Chr2g0302991 38.314 261 121 8 33 264 86 335 3.56e-45 159
Msa0822320 MtrunA17_Chr5g0429711 35.075 268 113 10 33 267 96 335 2.05e-36 135
Msa0822320 MtrunA17_Chr3g0079731 29.971 347 154 9 6 264 7 352 2.46e-35 133
Msa0822320 MtrunA17_Chr6g0459311 28.571 336 165 9 2 264 10 343 1.18e-28 114
Msa0822320 MtrunA17_Chr6g0486251 26.946 334 171 8 3 264 4 336 8.93e-28 112
Msa0822320 MtrunA17_Chr6g0486201 26.946 334 171 8 3 264 4 336 8.93e-28 112
Msa0822320 MtrunA17_Chr7g0275511 30.000 340 150 14 6 264 16 348 3.43e-26 107
Msa0822320 MtrunA17_Chr8g0335141 26.176 340 169 10 2 264 6 340 5.57e-26 107
Msa0822320 MtrunA17_Chr8g0373301 30.172 232 133 6 59 264 111 339 1.82e-25 105
Msa0822320 MtrunA17_Chr7g0232391 31.727 249 138 7 43 264 95 338 2.63e-25 105
Msa0822320 MtrunA17_Chr7g0232411 31.727 249 138 7 43 264 95 338 3.97e-25 104
Msa0822320 MtrunA17_Chr6g0462551 28.938 273 147 8 38 280 98 353 2.62e-24 102
Msa0822320 MtrunA17_Chr7g0232351 32.143 252 132 9 43 264 95 337 3.56e-24 100
Msa0822320 MtrunA17_Chr8g0334861 33.906 233 124 9 60 264 106 336 5.68e-24 101
Msa0822320 MtrunA17_Chr7g0232341 30.400 250 140 8 43 264 95 338 1.09e-23 100
Msa0822320 MtrunA17_Chr8g0361371 27.616 344 159 13 2 264 4 338 7.30e-23 98.2
Msa0822320 MtrunA17_Chr6g0462521 29.555 247 127 7 43 264 99 323 1.08e-22 97.8
Msa0822320 MtrunA17_Chr8g0370941 30.385 260 131 9 43 259 98 350 1.11e-22 97.8
Msa0822320 MtrunA17_Chr6g0462531 29.297 256 135 8 38 264 99 337 1.19e-22 97.4
Msa0822320 MtrunA17_Chr8g0335161 25.146 342 171 11 2 264 3 338 1.56e-22 97.4
Msa0822320 MtrunA17_Chr8g0334831 26.513 347 167 12 2 264 3 345 8.08e-22 95.5
Msa0822320 MtrunA17_Chr8g0339451 29.070 258 141 7 43 264 85 336 1.02e-21 95.1
Msa0822320 MtrunA17_Chr3g0079721 28.374 289 120 7 1 203 1 288 1.05e-21 92.8
Msa0822320 MtrunA17_Chr8g0339461 29.536 237 135 6 59 264 109 344 1.62e-21 94.4
Msa0822320 MtrunA17_Chr8g0334851 31.356 236 126 11 60 264 112 342 4.79e-21 93.2
Msa0822320 MtrunA17_Chr8g0336741 30.800 250 138 10 43 264 102 344 1.02e-20 92.0
Msa0822320 MtrunA17_Chr7g0232331 30.120 249 142 9 43 264 95 338 1.15e-20 92.0
Msa0822320 MtrunA17_Chr8g0347281 27.928 333 160 11 6 264 19 345 1.97e-20 91.3
Msa0822320 MtrunA17_Chr8g0336691 29.661 236 132 9 59 264 115 346 2.52e-20 91.7
Msa0822320 MtrunA17_Chr8g0336691 28.030 264 155 8 30 264 995 1252 4.76e-20 90.9
Msa0822320 MtrunA17_Chr8g0336691 27.848 237 107 9 59 264 582 785 4.65e-15 75.9
Msa0822320 MtrunA17_Chr8g0347271 27.941 340 151 13 6 264 20 346 7.66e-20 89.7
Msa0822320 MtrunA17_Chr6g0462571 28.517 263 128 7 38 264 96 334 1.84e-19 88.6
Msa0822320 MtrunA17_Chr6g0449931 31.276 243 135 8 51 264 101 340 2.06e-19 88.2
Msa0822320 MtrunA17_Chr1g0153451 29.150 247 143 7 44 264 96 336 2.10e-19 88.2
Msa0822320 MtrunA17_Chr8g0336651 31.092 238 128 10 59 264 883 1116 2.95e-19 88.6
Msa0822320 MtrunA17_Chr8g0336651 30.400 250 139 10 43 264 95 337 1.02e-18 87.0
Msa0822320 MtrunA17_Chr6g0462541 28.794 257 134 8 38 264 99 336 8.14e-19 86.7
Msa0822320 MtrunA17_Chr8g0336731 29.880 251 139 10 43 264 121 363 1.13e-18 86.3
Msa0822320 MtrunA17_Chr8g0339601 33.529 170 85 3 123 264 34 203 3.88e-18 83.6
Msa0822320 MtrunA17_Chr8g0339631 26.877 253 151 7 43 264 93 342 5.18e-18 84.3
Msa0822320 MtrunA17_Chr7g0232401 27.572 243 150 6 47 264 99 340 1.33e-17 82.8
Msa0822320 MtrunA17_Chr5g0403641 22.356 331 176 9 2 264 56 373 7.99e-17 80.9
Msa0822320 MtrunA17_Chr6g0464881 29.386 228 118 9 46 235 98 320 2.02e-15 76.3
Msa0822320 MtrunA17_Chr7g0232311 28.311 219 130 7 71 264 120 336 2.14e-14 73.2
Msa0822320 MtrunA17_Chr4g0042931 23.950 238 143 6 59 264 106 337 2.77e-14 73.2
Msa0822320 MtrunA17_Chr4g0053501 27.046 281 143 9 29 267 79 339 9.65e-14 71.6
Msa0822320 MtrunA17_Chr2g0329111 26.953 256 149 10 41 267 99 345 1.38e-13 70.9
Msa0822320 MtrunA17_Chr1g0153461 37.374 99 55 1 185 276 6 104 3.92e-13 67.4
Msa0822320 MtrunA17_Chr8g0365811 24.812 266 134 7 45 265 586 830 4.43e-13 69.7
Msa0822320 MtrunA17_Chr8g0365811 24.815 270 137 7 41 265 100 348 1.03e-11 65.9
Msa0822320 MtrunA17_Chr8g0339441 40.964 83 46 1 185 264 220 302 4.85e-13 69.3
Msa0822320 MtrunA17_Chr6g0482061 23.267 202 120 5 62 229 125 325 5.52e-13 69.3
Msa0822320 MtrunA17_Chr1g0161351 24.701 251 129 9 55 265 140 370 5.56e-13 69.3
Msa0822320 MtrunA17_Chr3g0112761 26.147 218 124 5 45 229 88 301 1.19e-11 65.1
Msa0822320 MtrunA17_Chr4g0042891 27.461 193 96 7 75 229 125 311 2.48e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0822320 AT3G21750.1 35.015 337 144 8 3 265 2 337 1.08e-58 195
Msa0822320 AT3G21780.1 33.923 339 145 9 3 265 2 337 2.37e-56 189
Msa0822320 AT3G21790.1 35.328 351 133 9 3 265 2 346 2.80e-55 187
Msa0822320 AT3G21760.1 36.467 351 132 9 3 265 2 349 2.02e-54 184
Msa0822320 AT3G21800.1 33.815 346 145 7 1 265 1 343 2.08e-54 184
Msa0822320 AT4G15280.1 34.203 345 141 9 3 265 2 342 4.44e-51 175
Msa0822320 AT4G15280.2 34.203 345 141 9 3 265 34 374 5.75e-51 176
Msa0822320 AT4G15260.1 37.946 224 112 3 67 265 1 222 1.79e-48 166
Msa0822320 AT1G07250.1 35.547 256 118 9 44 264 101 344 2.09e-38 142
Msa0822320 AT3G16520.2 36.797 231 108 7 62 264 115 335 1.37e-37 139
Msa0822320 AT3G16520.1 36.797 231 108 7 62 264 115 335 1.67e-37 139
Msa0822320 AT3G16520.3 36.797 231 108 7 62 264 115 335 1.96e-37 139
Msa0822320 AT2G29740.1 34.524 252 123 6 44 264 106 346 1.19e-36 137
Msa0822320 AT2G29730.1 37.500 232 104 7 60 264 116 333 8.22e-36 134
Msa0822320 AT1G07240.1 37.339 233 108 6 60 264 121 343 3.39e-35 133
Msa0822320 AT2G29710.1 30.058 346 147 9 1 264 1 333 1.08e-34 131
Msa0822320 AT1G07260.1 32.677 254 127 7 44 264 101 343 9.27e-33 126
Msa0822320 AT2G29750.1 34.524 252 123 8 44 264 106 346 2.60e-31 122
Msa0822320 AT5G66690.1 31.301 246 123 9 57 264 102 339 5.91e-26 107
Msa0822320 AT4G01070.2 29.155 343 158 12 2 265 5 341 2.66e-25 103
Msa0822320 AT1G01420.2 30.267 337 152 12 6 264 12 343 3.96e-25 105
Msa0822320 AT1G01420.1 30.267 337 152 12 6 264 9 340 3.96e-25 105
Msa0822320 AT4G01070.1 29.240 342 157 12 2 264 5 340 5.27e-25 104
Msa0822320 AT1G01390.2 30.178 338 151 13 6 264 26 357 1.03e-23 101
Msa0822320 AT1G01390.1 30.178 338 151 13 6 264 9 340 1.30e-23 100
Msa0822320 AT5G26310.1 30.864 243 128 9 57 264 102 339 1.42e-23 100
Msa0822320 AT2G18570.1 28.966 290 160 12 5 264 63 336 2.02e-23 100
Msa0822320 AT3G50740.1 27.759 299 160 12 4 264 64 344 1.51e-22 97.8
Msa0822320 AT4G36770.1 30.870 230 128 7 64 264 110 337 4.68e-22 96.3
Msa0822320 AT2G18560.1 28.685 251 143 9 41 264 5 246 4.82e-20 89.7
Msa0822320 AT4G15270.3 24.481 241 118 4 3 179 2 242 1.57e-18 84.7
Msa0822320 AT4G15270.1 25.359 209 96 3 3 151 2 210 4.81e-18 82.0
Msa0822320 AT2G15480.2 30.932 236 118 8 61 264 127 349 8.79e-17 80.9
Msa0822320 AT2G15480.1 30.932 236 118 8 61 264 127 349 9.01e-17 80.9
Msa0822320 AT5G12890.1 29.060 234 127 9 63 267 129 352 7.45e-16 78.2
Msa0822320 AT4G15270.2 26.214 206 83 4 3 148 2 198 1.04e-15 75.5
Msa0822320 AT4G15500.1 25.283 265 147 6 23 246 75 329 3.55e-14 73.2
Msa0822320 AT3G55710.1 26.744 258 141 8 56 276 104 350 3.25e-12 67.4

Find 83 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGGTCCTACTGGATATA+TGG 0.222720 5_3:+60651659 None:intergenic
TGATTACCCTCTTTCTGATT+TGG 0.258101 5_3:-60651412 Msa0822320:CDS
ACACTCGAGAGCATATATTT+TGG 0.279632 5_3:-60651258 Msa0822320:CDS
CACAGGGACGGAAAATTCTT+TGG 0.302571 5_3:+60651989 None:intergenic
GTGCTCCAACATGAAGAAAT+TGG 0.306618 5_3:-60652372 None:intergenic
TTTCGATGAGGATCAGATTA+AGG 0.308450 5_3:-60651523 Msa0822320:CDS
TAGTTCAGGATGAGAGAAAA+AGG 0.337088 5_3:+60651692 None:intergenic
CCCTCTTTCTGATTTGGATT+CGG 0.338208 5_3:-60651406 Msa0822320:CDS
ATCAGCATTCTTGAGGCCTT+TGG 0.355799 5_3:+60651764 None:intergenic
TTCCTTGCGTAGCACTGCAC+TGG 0.379218 5_3:+60651812 None:intergenic
AGATGACCTACAGCAGGAAT+AGG 0.379807 5_3:+60652335 None:intergenic
TTTCCTCTGCTTTGGGAGCA+GGG 0.390875 5_3:-60651550 Msa0822320:CDS
ACCTCCGGCGTAGCTTTCCT+TGG 0.400042 5_3:-60651954 Msa0822320:CDS
TTCTCTCATCCTGAACTAGC+TGG 0.401200 5_3:-60651687 Msa0822320:CDS
GTCCGGTCTAAGAACCCTTC+AGG 0.407829 5_3:+60651378 None:intergenic
ATGGGTACACCAGCTAGTTC+AGG 0.421980 5_3:+60651678 None:intergenic
GGCGCAATCTTGGTGCCCTT+CGG 0.434069 5_3:+60651438 None:intergenic
GCAATCTTGGTGCCCTTCGG+TGG 0.443922 5_3:+60651441 None:intergenic
GTAATCAGATGGCGCAATCT+TGG 0.445491 5_3:+60651428 None:intergenic
CAATCTTGGTGCCCTTCGGT+GGG 0.450616 5_3:+60651442 None:intergenic
GATTTGTTTCACATTGTGGC+TGG 0.462054 5_3:-60651287 Msa0822320:CDS
GTGTTTGTGTTCTTCACCTC+CGG 0.464066 5_3:-60651969 Msa0822320:CDS
GCTATCTCCAACCTCACTAC+TGG 0.466389 5_3:-60652077 Msa0822320:CDS
TACCTGAAGGGTTCTTAGAC+CGG 0.467934 5_3:-60651380 Msa0822320:CDS
AAGAGCGGCCACGTGGCAAT+GGG 0.468807 5_3:+60651231 None:intergenic
GGCAACGAGTTTGAAGGAAC+CGG 0.468895 5_3:+60651834 None:intergenic
CCCTTCCTATCTCTGTTGTC+CGG 0.469073 5_3:+60651361 None:intergenic
TCCTCTGCTTTGGGAGCAGG+GGG 0.470780 5_3:-60651548 Msa0822320:CDS
AAAGAGCGGCCACGTGGCAA+TGG 0.477140 5_3:+60651230 None:intergenic
GATGACCTACAGCAGGAATA+GGG 0.478890 5_3:+60652336 None:intergenic
ATGGGTCCTACTGGATATAT+GGG 0.483747 5_3:+60651660 None:intergenic
TTTGGCGAAGCTCGTGAAGA+AGG 0.489293 5_3:+60651782 None:intergenic
TTAGACCGGACAACAGAGAT+AGG 0.495862 5_3:-60651366 Msa0822320:CDS
TAGAAGCTTCGCGAACTCTA+CGG 0.509290 5_3:+60652304 None:intergenic
GTCAACAATGACAGCGGCGA+GGG 0.514708 5_3:+60652040 None:intergenic
TTTATCCCTATTCCTGCTGT+AGG 0.519972 5_3:-60652341 Msa0822320:CDS
CATTTGCTATTGAGAACAGT+GGG 0.520517 5_3:-60651494 Msa0822320:CDS
CATTTGCTTTATGAGCATCA+AGG 0.521159 5_3:+60652108 None:intergenic
TTCCTCTGCTTTGGGAGCAG+GGG 0.525020 5_3:-60651549 Msa0822320:CDS
ACCGAATCCAAATCAGAAAG+AGG 0.529575 5_3:+60651405 None:intergenic
GGAGGATTTGTTTCACATTG+TGG 0.539382 5_3:-60651291 Msa0822320:CDS
CAACATGAAGAAATTGGAAG+TGG 0.546566 5_3:-60652366 None:intergenic
GCACTGGGCAACGAGTTTGA+AGG 0.547807 5_3:+60651828 None:intergenic
CGGATTAGCAAAACTCGGAA+TGG 0.548963 5_3:+60651854 None:intergenic
TCCTTGCGTAGCACTGCACT+GGG 0.553636 5_3:+60651813 None:intergenic
GAATATAGAGATTCAAACCA+AGG 0.557708 5_3:+60651937 None:intergenic
TTGTTCTCCAGTAGTGAGGT+TGG 0.560216 5_3:+60652070 None:intergenic
ACCGGACAACAGAGATAGGA+AGG 0.560305 5_3:-60651362 Msa0822320:CDS
AAAATATATGCTCTCGAGTG+TGG 0.564548 5_3:+60651260 None:intergenic
TTCTTCACGAGCTTCGCCAA+AGG 0.567865 5_3:-60651780 Msa0822320:CDS
CAAACCAAGGAAAGCTACGC+CGG 0.571273 5_3:+60651950 None:intergenic
GAGGTGAAGAACACAAACAC+AGG 0.572036 5_3:+60651972 None:intergenic
AATCTTGGTGCCCTTCGGTG+GGG 0.582527 5_3:+60651443 None:intergenic
ACAGTGGGGCACGCTTCGTG+TGG 0.584974 5_3:-60651479 Msa0822320:CDS
GCCCAGTGCAGTGCTACGCA+AGG 0.589522 5_3:-60651814 Msa0822320:CDS
CATGTTGTTCTCCAGTAGTG+AGG 0.594109 5_3:+60652066 None:intergenic
AAAGGCCTCAAGAATGCTGA+TGG 0.594318 5_3:-60651762 Msa0822320:CDS
CCGAATCCAAATCAGAAAGA+GGG 0.599051 5_3:+60651406 None:intergenic
TCTACGTAAATCCCCACCGA+AGG 0.599458 5_3:-60651454 Msa0822320:CDS
TCAGAAAGAGGGTAATCAGA+TGG 0.601267 5_3:+60651417 None:intergenic
GAAACTAGATGACCTACAGC+AGG 0.604236 5_3:+60652329 None:intergenic
CTCACTACTGGAGAACAACA+TGG 0.604549 5_3:-60652065 Msa0822320:CDS
GAATGCCATCAGCATTCTTG+AGG 0.608769 5_3:+60651757 None:intergenic
GAAGAACACAAACACAGGGA+CGG 0.613624 5_3:+60651977 None:intergenic
CCCAAAGCAGAGGAAAACTA+CGG 0.621155 5_3:+60651557 None:intergenic
GTCTGTTGTTCAGCAAAGAG+CGG 0.624299 5_3:+60651216 None:intergenic
GCATTTGCTATTGAGAACAG+TGG 0.632261 5_3:-60651495 Msa0822320:CDS
CTAGCCCACCCAGCCACTGG+AGG 0.646311 5_3:-60651309 Msa0822320:intron
TCAACAATGACAGCGGCGAG+GGG 0.646989 5_3:+60652041 None:intergenic
CAGAGGAAAACTACGGACGA+AGG 0.655356 5_3:+60651564 None:intergenic
CTACGTAAATCCCCACCGAA+GGG 0.655763 5_3:-60651453 Msa0822320:CDS
GGAACCGGATTAGCAAAACT+CGG 0.666327 5_3:+60651849 None:intergenic
AGGAAAACTACGGACGAAGG+AGG 0.670493 5_3:+60651567 None:intergenic
TTCAGCAAAGAGCGGCCACG+TGG 0.670684 5_3:+60651224 None:intergenic
ACCAAGGAAAGCTACGCCGG+AGG 0.673603 5_3:+60651953 None:intergenic
ATGTGAAACAAATCCTCCAG+TGG 0.675732 5_3:+60651296 None:intergenic
AGGTGAAGAACACAAACACA+GGG 0.682831 5_3:+60651973 None:intergenic
TGTCAACAATGACAGCGGCG+AGG 0.683145 5_3:+60652039 None:intergenic
CCGGACAACAGAGATAGGAA+GGG 0.692994 5_3:-60651361 Msa0822320:intron
GAACATGTCAACAATGACAG+CGG 0.720643 5_3:+60652034 None:intergenic
TTGGTGTGCCCATTGCCACG+TGG 0.732476 5_3:-60651239 Msa0822320:CDS
TGAAGAGCTAGAATCCTATG+CGG 0.738045 5_3:-60651721 Msa0822320:CDS
ATTTGCTATTGAGAACAGTG+GGG 0.754654 5_3:-60651493 Msa0822320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATGATATCATTATAATCAA+TGG + chr5_3:60651944-60651963 None:intergenic 20.0%
!! ATTATAATGATATCATCAAG+TGG - chr5_3:60651947-60651966 Msa0822320:CDS 20.0%
!! GATGATATCATTATAATCAA+TGG + chr5_3:60651944-60651963 None:intergenic 20.0%
!! ATTATAATGATATCATCAAG+TGG - chr5_3:60651947-60651966 Msa0822320:CDS 20.0%
GAATATAGAGATTCAAACCA+AGG + chr5_3:60651615-60651634 None:intergenic 30.0%
! ACAGACTAATGCTTTTCAAT+TGG - chr5_3:60652350-60652369 Msa0822320:CDS 30.0%
GAATATAGAGATTCAAACCA+AGG + chr5_3:60651615-60651634 None:intergenic 30.0%
! ACAGACTAATGCTTTTCAAT+TGG - chr5_3:60652350-60652369 Msa0822320:CDS 30.0%
! AATGGATTTAGCGTAGAGAT+CGG + chr5_3:60651335-60651354 None:intergenic 35.0%
CATTTGCTTTATGAGCATCA+AGG + chr5_3:60651444-60651463 None:intergenic 35.0%
TAGTTCAGGATGAGAGAAAA+AGG + chr5_3:60651860-60651879 None:intergenic 35.0%
!! TTGGGCTCTAGGTTTAATAT+GGG + chr5_3:60651910-60651929 None:intergenic 35.0%
!! TTTGGGCTCTAGGTTTAATA+TGG + chr5_3:60651911-60651930 None:intergenic 35.0%
ATTATAATCAATGGTGCCCT+CGG + chr5_3:60651935-60651954 None:intergenic 35.0%
TTTCGATGAGGATCAGATTA+AGG - chr5_3:60652026-60652045 Msa0822320:CDS 35.0%
!! CATTTGCTATTGAGAACAGT+GGG - chr5_3:60652055-60652074 Msa0822320:CDS 35.0%
!! ATTTGCTATTGAGAACAGTG+GGG - chr5_3:60652056-60652075 Msa0822320:CDS 35.0%
TGATTACCCTCTTTCTGATT+TGG - chr5_3:60652137-60652156 Msa0822320:intron 35.0%
AAAATATATGCTCTCGAGTG+TGG + chr5_3:60652292-60652311 None:intergenic 35.0%
!! ACACTCGAGAGCATATATTT+TGG - chr5_3:60652291-60652310 Msa0822320:intron 35.0%
! AATGGATTTAGCGTAGAGAT+CGG + chr5_3:60651335-60651354 None:intergenic 35.0%
CATTTGCTTTATGAGCATCA+AGG + chr5_3:60651444-60651463 None:intergenic 35.0%
TAGTTCAGGATGAGAGAAAA+AGG + chr5_3:60651860-60651879 None:intergenic 35.0%
!! TTGGGCTCTAGGTTTAATAT+GGG + chr5_3:60651910-60651929 None:intergenic 35.0%
!! TTTGGGCTCTAGGTTTAATA+TGG + chr5_3:60651911-60651930 None:intergenic 35.0%
ATTATAATCAATGGTGCCCT+CGG + chr5_3:60651935-60651954 None:intergenic 35.0%
TTTCGATGAGGATCAGATTA+AGG - chr5_3:60652026-60652045 Msa0822320:CDS 35.0%
!! CATTTGCTATTGAGAACAGT+GGG - chr5_3:60652055-60652074 Msa0822320:CDS 35.0%
!! ATTTGCTATTGAGAACAGTG+GGG - chr5_3:60652056-60652075 Msa0822320:CDS 35.0%
TGATTACCCTCTTTCTGATT+TGG - chr5_3:60652137-60652156 Msa0822320:intron 35.0%
AAAATATATGCTCTCGAGTG+TGG + chr5_3:60652292-60652311 None:intergenic 35.0%
!! ACACTCGAGAGCATATATTT+TGG - chr5_3:60652291-60652310 Msa0822320:intron 35.0%
TTTATCCCTATTCCTGCTGT+AGG - chr5_3:60651208-60651227 Msa0822320:CDS 40.0%
ACATGGAGAGAATCAGAGAT+GGG + chr5_3:60651358-60651377 None:intergenic 40.0%
!! ATTCTGGAAGGTTGATGACA+TGG + chr5_3:60651375-60651394 None:intergenic 40.0%
GTTCATATCTGAACCTGGAT+CGG + chr5_3:60651416-60651435 None:intergenic 40.0%
GAACATGTCAACAATGACAG+CGG + chr5_3:60651518-60651537 None:intergenic 40.0%
AGGTGAAGAACACAAACACA+GGG + chr5_3:60651579-60651598 None:intergenic 40.0%
! CATTCCGAGTTTTGCTAATC+CGG - chr5_3:60651696-60651715 Msa0822320:CDS 40.0%
TGAAGAGCTAGAATCCTATG+CGG - chr5_3:60651828-60651847 Msa0822320:CDS 40.0%
ATGGGTCCTACTGGATATAT+GGG + chr5_3:60651892-60651911 None:intergenic 40.0%
TATGGGTCCTACTGGATATA+TGG + chr5_3:60651893-60651912 None:intergenic 40.0%
AGGTTTAATATGGGTCCTAC+TGG + chr5_3:60651901-60651920 None:intergenic 40.0%
!! GCATTTGCTATTGAGAACAG+TGG - chr5_3:60652054-60652073 Msa0822320:CDS 40.0%
TCAGAAAGAGGGTAATCAGA+TGG + chr5_3:60652135-60652154 None:intergenic 40.0%
CCGAATCCAAATCAGAAAGA+GGG + chr5_3:60652146-60652165 None:intergenic 40.0%
!! CCCTCTTTCTGATTTGGATT+CGG - chr5_3:60652143-60652162 Msa0822320:intron 40.0%
ACCGAATCCAAATCAGAAAG+AGG + chr5_3:60652147-60652166 None:intergenic 40.0%
!! TTGGATTCGGTTTTACCTGA+AGG - chr5_3:60652156-60652175 Msa0822320:intron 40.0%
!! TGGATTCGGTTTTACCTGAA+GGG - chr5_3:60652157-60652176 Msa0822320:intron 40.0%
ACAGAGATAGGAAGGGTAAT+TGG - chr5_3:60652195-60652214 Msa0822320:intron 40.0%
AGATAGGAAGGGTAATTGGA+TGG - chr5_3:60652199-60652218 Msa0822320:intron 40.0%
GATAGGAAGGGTAATTGGAT+GGG - chr5_3:60652200-60652219 Msa0822320:intron 40.0%
ATGTGAAACAAATCCTCCAG+TGG + chr5_3:60652256-60652275 None:intergenic 40.0%
! GGAGGATTTGTTTCACATTG+TGG - chr5_3:60652258-60652277 Msa0822320:intron 40.0%
! GATTTGTTTCACATTGTGGC+TGG - chr5_3:60652262-60652281 Msa0822320:intron 40.0%
TTTATCCCTATTCCTGCTGT+AGG - chr5_3:60651208-60651227 Msa0822320:CDS 40.0%
ACATGGAGAGAATCAGAGAT+GGG + chr5_3:60651358-60651377 None:intergenic 40.0%
!! ATTCTGGAAGGTTGATGACA+TGG + chr5_3:60651375-60651394 None:intergenic 40.0%
GTTCATATCTGAACCTGGAT+CGG + chr5_3:60651416-60651435 None:intergenic 40.0%
GAACATGTCAACAATGACAG+CGG + chr5_3:60651518-60651537 None:intergenic 40.0%
AGGTGAAGAACACAAACACA+GGG + chr5_3:60651579-60651598 None:intergenic 40.0%
! CATTCCGAGTTTTGCTAATC+CGG - chr5_3:60651696-60651715 Msa0822320:CDS 40.0%
TGAAGAGCTAGAATCCTATG+CGG - chr5_3:60651828-60651847 Msa0822320:CDS 40.0%
ATGGGTCCTACTGGATATAT+GGG + chr5_3:60651892-60651911 None:intergenic 40.0%
TATGGGTCCTACTGGATATA+TGG + chr5_3:60651893-60651912 None:intergenic 40.0%
AGGTTTAATATGGGTCCTAC+TGG + chr5_3:60651901-60651920 None:intergenic 40.0%
!! GCATTTGCTATTGAGAACAG+TGG - chr5_3:60652054-60652073 Msa0822320:CDS 40.0%
TCAGAAAGAGGGTAATCAGA+TGG + chr5_3:60652135-60652154 None:intergenic 40.0%
CCGAATCCAAATCAGAAAGA+GGG + chr5_3:60652146-60652165 None:intergenic 40.0%
!! CCCTCTTTCTGATTTGGATT+CGG - chr5_3:60652143-60652162 Msa0822320:intron 40.0%
ACCGAATCCAAATCAGAAAG+AGG + chr5_3:60652147-60652166 None:intergenic 40.0%
!! TTGGATTCGGTTTTACCTGA+AGG - chr5_3:60652156-60652175 Msa0822320:intron 40.0%
!! TGGATTCGGTTTTACCTGAA+GGG - chr5_3:60652157-60652176 Msa0822320:intron 40.0%
ACAGAGATAGGAAGGGTAAT+TGG - chr5_3:60652195-60652214 Msa0822320:intron 40.0%
AGATAGGAAGGGTAATTGGA+TGG - chr5_3:60652199-60652218 Msa0822320:intron 40.0%
GATAGGAAGGGTAATTGGAT+GGG - chr5_3:60652200-60652219 Msa0822320:intron 40.0%
ATGTGAAACAAATCCTCCAG+TGG + chr5_3:60652256-60652275 None:intergenic 40.0%
! GGAGGATTTGTTTCACATTG+TGG - chr5_3:60652258-60652277 Msa0822320:intron 40.0%
! GATTTGTTTCACATTGTGGC+TGG - chr5_3:60652262-60652281 Msa0822320:intron 40.0%
GATGACCTACAGCAGGAATA+GGG + chr5_3:60651216-60651235 None:intergenic 45.0%
AGATGACCTACAGCAGGAAT+AGG + chr5_3:60651217-60651236 None:intergenic 45.0%
GAAACTAGATGACCTACAGC+AGG + chr5_3:60651223-60651242 None:intergenic 45.0%
TAGAAGCTTCGCGAACTCTA+CGG + chr5_3:60651248-60651267 None:intergenic 45.0%
TCATGACCAGGACAGTTACT+CGG + chr5_3:60651291-60651310 None:intergenic 45.0%
TGTGTGCGAATTTCATGACC+AGG + chr5_3:60651303-60651322 None:intergenic 45.0%
GAGAGAATCAGAGATGGGAA+TGG + chr5_3:60651353-60651372 None:intergenic 45.0%
GACATGGAGAGAATCAGAGA+TGG + chr5_3:60651359-60651378 None:intergenic 45.0%
AGGGAACAGAACATTCTGGA+AGG + chr5_3:60651387-60651406 None:intergenic 45.0%
GTTGAGGGAACAGAACATTC+TGG + chr5_3:60651391-60651410 None:intergenic 45.0%
! AGAGCGTTCATATCTGAACC+TGG + chr5_3:60651421-60651440 None:intergenic 45.0%
TTGTTCTCCAGTAGTGAGGT+TGG + chr5_3:60651482-60651501 None:intergenic 45.0%
CATGTTGTTCTCCAGTAGTG+AGG + chr5_3:60651486-60651505 None:intergenic 45.0%
CTCACTACTGGAGAACAACA+TGG - chr5_3:60651484-60651503 Msa0822320:CDS 45.0%
CACAGGGACGGAAAATTCTT+TGG + chr5_3:60651563-60651582 None:intergenic 45.0%
GAAGAACACAAACACAGGGA+CGG + chr5_3:60651575-60651594 None:intergenic 45.0%
GAGGTGAAGAACACAAACAC+AGG + chr5_3:60651580-60651599 None:intergenic 45.0%
GTGTTTGTGTTCTTCACCTC+CGG - chr5_3:60651580-60651599 Msa0822320:CDS 45.0%
!! CGGATTAGCAAAACTCGGAA+TGG + chr5_3:60651698-60651717 None:intergenic 45.0%
!! GGAACCGGATTAGCAAAACT+CGG + chr5_3:60651703-60651722 None:intergenic 45.0%
ATCAGCATTCTTGAGGCCTT+TGG + chr5_3:60651788-60651807 None:intergenic 45.0%
AAAGGCCTCAAGAATGCTGA+TGG - chr5_3:60651787-60651806 Msa0822320:CDS 45.0%
GAATGCCATCAGCATTCTTG+AGG + chr5_3:60651795-60651814 None:intergenic 45.0%
GAAAAAGGAGTGAACCGCAT+AGG + chr5_3:60651845-60651864 None:intergenic 45.0%
TTCTCTCATCCTGAACTAGC+TGG - chr5_3:60651862-60651881 Msa0822320:CDS 45.0%
GGTGTACCCATATATCCAGT+AGG - chr5_3:60651883-60651902 Msa0822320:CDS 45.0%
! TCCGTAGTTTTCCTCTGCTT+TGG - chr5_3:60651991-60652010 Msa0822320:CDS 45.0%
CCCAAAGCAGAGGAAAACTA+CGG + chr5_3:60651995-60652014 None:intergenic 45.0%
! CCGTAGTTTTCCTCTGCTTT+GGG - chr5_3:60651992-60652011 Msa0822320:CDS 45.0%
GTAATCAGATGGCGCAATCT+TGG + chr5_3:60652124-60652143 None:intergenic 45.0%
TACCTGAAGGGTTCTTAGAC+CGG - chr5_3:60652169-60652188 Msa0822320:intron 45.0%
TTAGACCGGACAACAGAGAT+AGG - chr5_3:60652183-60652202 Msa0822320:intron 45.0%
AAACAAATCCTCCAGTGGCT+GGG + chr5_3:60652251-60652270 None:intergenic 45.0%
GTCTGTTGTTCAGCAAAGAG+CGG + chr5_3:60652336-60652355 None:intergenic 45.0%
GATGACCTACAGCAGGAATA+GGG + chr5_3:60651216-60651235 None:intergenic 45.0%
AGATGACCTACAGCAGGAAT+AGG + chr5_3:60651217-60651236 None:intergenic 45.0%
GAAACTAGATGACCTACAGC+AGG + chr5_3:60651223-60651242 None:intergenic 45.0%
TAGAAGCTTCGCGAACTCTA+CGG + chr5_3:60651248-60651267 None:intergenic 45.0%
TCATGACCAGGACAGTTACT+CGG + chr5_3:60651291-60651310 None:intergenic 45.0%
TGTGTGCGAATTTCATGACC+AGG + chr5_3:60651303-60651322 None:intergenic 45.0%
GAGAGAATCAGAGATGGGAA+TGG + chr5_3:60651353-60651372 None:intergenic 45.0%
GACATGGAGAGAATCAGAGA+TGG + chr5_3:60651359-60651378 None:intergenic 45.0%
AGGGAACAGAACATTCTGGA+AGG + chr5_3:60651387-60651406 None:intergenic 45.0%
GTTGAGGGAACAGAACATTC+TGG + chr5_3:60651391-60651410 None:intergenic 45.0%
! AGAGCGTTCATATCTGAACC+TGG + chr5_3:60651421-60651440 None:intergenic 45.0%
TTGTTCTCCAGTAGTGAGGT+TGG + chr5_3:60651482-60651501 None:intergenic 45.0%
CATGTTGTTCTCCAGTAGTG+AGG + chr5_3:60651486-60651505 None:intergenic 45.0%
CTCACTACTGGAGAACAACA+TGG - chr5_3:60651484-60651503 Msa0822320:CDS 45.0%
CACAGGGACGGAAAATTCTT+TGG + chr5_3:60651563-60651582 None:intergenic 45.0%
GAAGAACACAAACACAGGGA+CGG + chr5_3:60651575-60651594 None:intergenic 45.0%
GAGGTGAAGAACACAAACAC+AGG + chr5_3:60651580-60651599 None:intergenic 45.0%
GTGTTTGTGTTCTTCACCTC+CGG - chr5_3:60651580-60651599 Msa0822320:CDS 45.0%
!! CGGATTAGCAAAACTCGGAA+TGG + chr5_3:60651698-60651717 None:intergenic 45.0%
!! GGAACCGGATTAGCAAAACT+CGG + chr5_3:60651703-60651722 None:intergenic 45.0%
ATCAGCATTCTTGAGGCCTT+TGG + chr5_3:60651788-60651807 None:intergenic 45.0%
AAAGGCCTCAAGAATGCTGA+TGG - chr5_3:60651787-60651806 Msa0822320:CDS 45.0%
GAATGCCATCAGCATTCTTG+AGG + chr5_3:60651795-60651814 None:intergenic 45.0%
GAAAAAGGAGTGAACCGCAT+AGG + chr5_3:60651845-60651864 None:intergenic 45.0%
TTCTCTCATCCTGAACTAGC+TGG - chr5_3:60651862-60651881 Msa0822320:CDS 45.0%
GGTGTACCCATATATCCAGT+AGG - chr5_3:60651883-60651902 Msa0822320:CDS 45.0%
! TCCGTAGTTTTCCTCTGCTT+TGG - chr5_3:60651991-60652010 Msa0822320:CDS 45.0%
CCCAAAGCAGAGGAAAACTA+CGG + chr5_3:60651995-60652014 None:intergenic 45.0%
! CCGTAGTTTTCCTCTGCTTT+GGG - chr5_3:60651992-60652011 Msa0822320:CDS 45.0%
GTAATCAGATGGCGCAATCT+TGG + chr5_3:60652124-60652143 None:intergenic 45.0%
TACCTGAAGGGTTCTTAGAC+CGG - chr5_3:60652169-60652188 Msa0822320:intron 45.0%
TTAGACCGGACAACAGAGAT+AGG - chr5_3:60652183-60652202 Msa0822320:intron 45.0%
AAACAAATCCTCCAGTGGCT+GGG + chr5_3:60652251-60652270 None:intergenic 45.0%
GTCTGTTGTTCAGCAAAGAG+CGG + chr5_3:60652336-60652355 None:intergenic 45.0%
TTACTCGGAGGCGGTTATCA+CGG + chr5_3:60651276-60651295 None:intergenic 50.0%
GAACCTGGATCGGAAGTTGA+GGG + chr5_3:60651406-60651425 None:intergenic 50.0%
TGAACCTGGATCGGAAGTTG+AGG + chr5_3:60651407-60651426 None:intergenic 50.0%
GCTATCTCCAACCTCACTAC+TGG - chr5_3:60651472-60651491 Msa0822320:CDS 50.0%
CAAACCAAGGAAAGCTACGC+CGG + chr5_3:60651602-60651621 None:intergenic 50.0%
GGCAACGAGTTTGAAGGAAC+CGG + chr5_3:60651718-60651737 None:intergenic 50.0%
TTTGGCGAAGCTCGTGAAGA+AGG + chr5_3:60651770-60651789 None:intergenic 50.0%
TTCTTCACGAGCTTCGCCAA+AGG - chr5_3:60651769-60651788 Msa0822320:CDS 50.0%
ATGGGTACACCAGCTAGTTC+AGG + chr5_3:60651874-60651893 None:intergenic 50.0%
AAACCTAGAGCCCAAAACCG+AGG - chr5_3:60651915-60651934 Msa0822320:intron 50.0%
AACCTAGAGCCCAAAACCGA+GGG - chr5_3:60651916-60651935 Msa0822320:intron 50.0%
! TCAATGGTGCCCTCGGTTTT+GGG + chr5_3:60651928-60651947 None:intergenic 50.0%
! ATCAATGGTGCCCTCGGTTT+TGG + chr5_3:60651929-60651948 None:intergenic 50.0%
AGGAAAACTACGGACGAAGG+AGG + chr5_3:60651985-60652004 None:intergenic 50.0%
CAGAGGAAAACTACGGACGA+AGG + chr5_3:60651988-60652007 None:intergenic 50.0%
!!! TTTTCCTCTGCTTTGGGAGC+AGG - chr5_3:60651998-60652017 Msa0822320:CDS 50.0%
!! TTTCCTCTGCTTTGGGAGCA+GGG - chr5_3:60651999-60652018 Msa0822320:CDS 50.0%
TCTACGTAAATCCCCACCGA+AGG - chr5_3:60652095-60652114 Msa0822320:CDS 50.0%
CTACGTAAATCCCCACCGAA+GGG - chr5_3:60652096-60652115 Msa0822320:CDS 50.0%
ACCGGACAACAGAGATAGGA+AGG - chr5_3:60652187-60652206 Msa0822320:intron 50.0%
CCCTTCCTATCTCTGTTGTC+CGG + chr5_3:60652191-60652210 None:intergenic 50.0%
CCGGACAACAGAGATAGGAA+GGG - chr5_3:60652188-60652207 Msa0822320:intron 50.0%
GGCTAGTATTTGGGCTTGTG+GGG + chr5_3:60652226-60652245 None:intergenic 50.0%
! GGGCTAGTATTTGGGCTTGT+GGG + chr5_3:60652227-60652246 None:intergenic 50.0%
!! TGGGCTAGTATTTGGGCTTG+TGG + chr5_3:60652228-60652247 None:intergenic 50.0%
GAAACAAATCCTCCAGTGGC+TGG + chr5_3:60652252-60652271 None:intergenic 50.0%
TTACTCGGAGGCGGTTATCA+CGG + chr5_3:60651276-60651295 None:intergenic 50.0%
GAACCTGGATCGGAAGTTGA+GGG + chr5_3:60651406-60651425 None:intergenic 50.0%
TGAACCTGGATCGGAAGTTG+AGG + chr5_3:60651407-60651426 None:intergenic 50.0%
GCTATCTCCAACCTCACTAC+TGG - chr5_3:60651472-60651491 Msa0822320:CDS 50.0%
CAAACCAAGGAAAGCTACGC+CGG + chr5_3:60651602-60651621 None:intergenic 50.0%
GGCAACGAGTTTGAAGGAAC+CGG + chr5_3:60651718-60651737 None:intergenic 50.0%
TTTGGCGAAGCTCGTGAAGA+AGG + chr5_3:60651770-60651789 None:intergenic 50.0%
TTCTTCACGAGCTTCGCCAA+AGG - chr5_3:60651769-60651788 Msa0822320:CDS 50.0%
ATGGGTACACCAGCTAGTTC+AGG + chr5_3:60651874-60651893 None:intergenic 50.0%
AAACCTAGAGCCCAAAACCG+AGG - chr5_3:60651915-60651934 Msa0822320:intron 50.0%
AACCTAGAGCCCAAAACCGA+GGG - chr5_3:60651916-60651935 Msa0822320:intron 50.0%
! TCAATGGTGCCCTCGGTTTT+GGG + chr5_3:60651928-60651947 None:intergenic 50.0%
! ATCAATGGTGCCCTCGGTTT+TGG + chr5_3:60651929-60651948 None:intergenic 50.0%
AGGAAAACTACGGACGAAGG+AGG + chr5_3:60651985-60652004 None:intergenic 50.0%
CAGAGGAAAACTACGGACGA+AGG + chr5_3:60651988-60652007 None:intergenic 50.0%
!!! TTTTCCTCTGCTTTGGGAGC+AGG - chr5_3:60651998-60652017 Msa0822320:CDS 50.0%
!! TTTCCTCTGCTTTGGGAGCA+GGG - chr5_3:60651999-60652018 Msa0822320:CDS 50.0%
TCTACGTAAATCCCCACCGA+AGG - chr5_3:60652095-60652114 Msa0822320:CDS 50.0%
CTACGTAAATCCCCACCGAA+GGG - chr5_3:60652096-60652115 Msa0822320:CDS 50.0%
ACCGGACAACAGAGATAGGA+AGG - chr5_3:60652187-60652206 Msa0822320:intron 50.0%
CCCTTCCTATCTCTGTTGTC+CGG + chr5_3:60652191-60652210 None:intergenic 50.0%
CCGGACAACAGAGATAGGAA+GGG - chr5_3:60652188-60652207 Msa0822320:intron 50.0%
GGCTAGTATTTGGGCTTGTG+GGG + chr5_3:60652226-60652245 None:intergenic 50.0%
! GGGCTAGTATTTGGGCTTGT+GGG + chr5_3:60652227-60652246 None:intergenic 50.0%
!! TGGGCTAGTATTTGGGCTTG+TGG + chr5_3:60652228-60652247 None:intergenic 50.0%
GAAACAAATCCTCCAGTGGC+TGG + chr5_3:60652252-60652271 None:intergenic 50.0%
TGACCAGGACAGTTACTCGG+AGG + chr5_3:60651288-60651307 None:intergenic 55.0%
GTTCCCTCAACTTCCGATCC+AGG - chr5_3:60651400-60651419 Msa0822320:CDS 55.0%
TCAACAATGACAGCGGCGAG+GGG + chr5_3:60651511-60651530 None:intergenic 55.0%
GTCAACAATGACAGCGGCGA+GGG + chr5_3:60651512-60651531 None:intergenic 55.0%
TGTCAACAATGACAGCGGCG+AGG + chr5_3:60651513-60651532 None:intergenic 55.0%
GCACTGGGCAACGAGTTTGA+AGG + chr5_3:60651724-60651743 None:intergenic 55.0%
TCCTTGCGTAGCACTGCACT+GGG + chr5_3:60651739-60651758 None:intergenic 55.0%
TTCCTTGCGTAGCACTGCAC+TGG + chr5_3:60651740-60651759 None:intergenic 55.0%
!! TTCCTCTGCTTTGGGAGCAG+GGG - chr5_3:60652000-60652019 Msa0822320:CDS 55.0%
!! AATCTTGGTGCCCTTCGGTG+GGG + chr5_3:60652109-60652128 None:intergenic 55.0%
!! CAATCTTGGTGCCCTTCGGT+GGG + chr5_3:60652110-60652129 None:intergenic 55.0%
GTCCGGTCTAAGAACCCTTC+AGG + chr5_3:60652174-60652193 None:intergenic 55.0%
!! GGCTGGGTGGGCTAGTATTT+GGG + chr5_3:60652235-60652254 None:intergenic 55.0%
!! TGGCTGGGTGGGCTAGTATT+TGG + chr5_3:60652236-60652255 None:intergenic 55.0%
AAATCCTCCAGTGGCTGGGT+GGG + chr5_3:60652247-60652266 None:intergenic 55.0%
TGACCAGGACAGTTACTCGG+AGG + chr5_3:60651288-60651307 None:intergenic 55.0%
GTTCCCTCAACTTCCGATCC+AGG - chr5_3:60651400-60651419 Msa0822320:CDS 55.0%
TCAACAATGACAGCGGCGAG+GGG + chr5_3:60651511-60651530 None:intergenic 55.0%
GTCAACAATGACAGCGGCGA+GGG + chr5_3:60651512-60651531 None:intergenic 55.0%
TGTCAACAATGACAGCGGCG+AGG + chr5_3:60651513-60651532 None:intergenic 55.0%
GCACTGGGCAACGAGTTTGA+AGG + chr5_3:60651724-60651743 None:intergenic 55.0%
TCCTTGCGTAGCACTGCACT+GGG + chr5_3:60651739-60651758 None:intergenic 55.0%
TTCCTTGCGTAGCACTGCAC+TGG + chr5_3:60651740-60651759 None:intergenic 55.0%
!! TTCCTCTGCTTTGGGAGCAG+GGG - chr5_3:60652000-60652019 Msa0822320:CDS 55.0%
!! AATCTTGGTGCCCTTCGGTG+GGG + chr5_3:60652109-60652128 None:intergenic 55.0%
!! CAATCTTGGTGCCCTTCGGT+GGG + chr5_3:60652110-60652129 None:intergenic 55.0%
GTCCGGTCTAAGAACCCTTC+AGG + chr5_3:60652174-60652193 None:intergenic 55.0%
!! GGCTGGGTGGGCTAGTATTT+GGG + chr5_3:60652235-60652254 None:intergenic 55.0%
!! TGGCTGGGTGGGCTAGTATT+TGG + chr5_3:60652236-60652255 None:intergenic 55.0%
AAATCCTCCAGTGGCTGGGT+GGG + chr5_3:60652247-60652266 None:intergenic 55.0%
CCAGGACAGTTACTCGGAGG+CGG + chr5_3:60651285-60651304 None:intergenic 60.0%
ACCTCCGGCGTAGCTTTCCT+TGG - chr5_3:60651595-60651614 Msa0822320:intron 60.0%
ACCAAGGAAAGCTACGCCGG+AGG + chr5_3:60651599-60651618 None:intergenic 60.0%
!!! TGCCCTCGGTTTTGGGCTCT+AGG + chr5_3:60651921-60651940 None:intergenic 60.0%
!! TCCTCTGCTTTGGGAGCAGG+GGG - chr5_3:60652001-60652020 Msa0822320:CDS 60.0%
GAGCAGGGGGTCTTTCGATG+AGG - chr5_3:60652014-60652033 Msa0822320:CDS 60.0%
!! GCAATCTTGGTGCCCTTCGG+TGG + chr5_3:60652111-60652130 None:intergenic 60.0%
!! GGCGCAATCTTGGTGCCCTT+CGG + chr5_3:60652114-60652133 None:intergenic 60.0%
ATACTAGCCCACCCAGCCAC+TGG - chr5_3:60652237-60652256 Msa0822320:intron 60.0%
CAAATCCTCCAGTGGCTGGG+TGG + chr5_3:60652248-60652267 None:intergenic 60.0%
TTGGTGTGCCCATTGCCACG+TGG - chr5_3:60652310-60652329 Msa0822320:CDS 60.0%
AAGAGCGGCCACGTGGCAAT+GGG + chr5_3:60652321-60652340 None:intergenic 60.0%
AAAGAGCGGCCACGTGGCAA+TGG + chr5_3:60652322-60652341 None:intergenic 60.0%
TTCAGCAAAGAGCGGCCACG+TGG + chr5_3:60652328-60652347 None:intergenic 60.0%
CCAGGACAGTTACTCGGAGG+CGG + chr5_3:60651285-60651304 None:intergenic 60.0%
ACCTCCGGCGTAGCTTTCCT+TGG - chr5_3:60651595-60651614 Msa0822320:intron 60.0%
ACCAAGGAAAGCTACGCCGG+AGG + chr5_3:60651599-60651618 None:intergenic 60.0%
!!! TGCCCTCGGTTTTGGGCTCT+AGG + chr5_3:60651921-60651940 None:intergenic 60.0%
!! TCCTCTGCTTTGGGAGCAGG+GGG - chr5_3:60652001-60652020 Msa0822320:CDS 60.0%
GAGCAGGGGGTCTTTCGATG+AGG - chr5_3:60652014-60652033 Msa0822320:CDS 60.0%
!! GCAATCTTGGTGCCCTTCGG+TGG + chr5_3:60652111-60652130 None:intergenic 60.0%
!! GGCGCAATCTTGGTGCCCTT+CGG + chr5_3:60652114-60652133 None:intergenic 60.0%
ATACTAGCCCACCCAGCCAC+TGG - chr5_3:60652237-60652256 Msa0822320:intron 60.0%
CAAATCCTCCAGTGGCTGGG+TGG + chr5_3:60652248-60652267 None:intergenic 60.0%
TTGGTGTGCCCATTGCCACG+TGG - chr5_3:60652310-60652329 Msa0822320:CDS 60.0%
AAGAGCGGCCACGTGGCAAT+GGG + chr5_3:60652321-60652340 None:intergenic 60.0%
AAAGAGCGGCCACGTGGCAA+TGG + chr5_3:60652322-60652341 None:intergenic 60.0%
TTCAGCAAAGAGCGGCCACG+TGG + chr5_3:60652328-60652347 None:intergenic 60.0%
CCGCCTCCGAGTAACTGTCC+TGG - chr5_3:60651282-60651301 Msa0822320:CDS 65.0%
GCCCAGTGCAGTGCTACGCA+AGG - chr5_3:60651735-60651754 Msa0822320:CDS 65.0%
ACCCCCTGCTCCCAAAGCAG+AGG + chr5_3:60652005-60652024 None:intergenic 65.0%
ACAGTGGGGCACGCTTCGTG+TGG - chr5_3:60652070-60652089 Msa0822320:CDS 65.0%
CCGCCTCCGAGTAACTGTCC+TGG - chr5_3:60651282-60651301 Msa0822320:CDS 65.0%
GCCCAGTGCAGTGCTACGCA+AGG - chr5_3:60651735-60651754 Msa0822320:CDS 65.0%
ACCCCCTGCTCCCAAAGCAG+AGG + chr5_3:60652005-60652024 None:intergenic 65.0%
ACAGTGGGGCACGCTTCGTG+TGG - chr5_3:60652070-60652089 Msa0822320:CDS 65.0%
CTAGCCCACCCAGCCACTGG+AGG - chr5_3:60652240-60652259 Msa0822320:intron 70.0%
CTAGCCCACCCAGCCACTGG+AGG - chr5_3:60652240-60652259 Msa0822320:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 60651187 60652384 60651187 ID=Msa0822320;Name=Msa0822320
chr5_3 mRNA 60651187 60652384 60651187 ID=Msa0822320-mRNA-1;Parent=Msa0822320;Name=Msa0822320-mRNA-1;_AED=0.39;_eAED=0.48;_QI=0|0|0|1|0|0|5|0|308
chr5_3 exon 60652297 60652384 60652297 ID=Msa0822320-mRNA-1:exon:18649;Parent=Msa0822320-mRNA-1
chr5_3 exon 60651930 60652149 60651930 ID=Msa0822320-mRNA-1:exon:18648;Parent=Msa0822320-mRNA-1
chr5_3 exon 60651671 60651914 60651671 ID=Msa0822320-mRNA-1:exon:18647;Parent=Msa0822320-mRNA-1
chr5_3 exon 60651362 60651604 60651362 ID=Msa0822320-mRNA-1:exon:18646;Parent=Msa0822320-mRNA-1
chr5_3 exon 60651187 60651318 60651187 ID=Msa0822320-mRNA-1:exon:18645;Parent=Msa0822320-mRNA-1
chr5_3 CDS 60652297 60652384 60652297 ID=Msa0822320-mRNA-1:cds;Parent=Msa0822320-mRNA-1
chr5_3 CDS 60651930 60652149 60651930 ID=Msa0822320-mRNA-1:cds;Parent=Msa0822320-mRNA-1
chr5_3 CDS 60651671 60651914 60651671 ID=Msa0822320-mRNA-1:cds;Parent=Msa0822320-mRNA-1
chr5_3 CDS 60651362 60651604 60651362 ID=Msa0822320-mRNA-1:cds;Parent=Msa0822320-mRNA-1
chr5_3 CDS 60651187 60651318 60651187 ID=Msa0822320-mRNA-1:cds;Parent=Msa0822320-mRNA-1
Gene Sequence

>Msa0822320

ATGAAGAAATTGGAAGTGGTGTTTATCCCTATTCCTGCTGTAGGTCATCTAGTTTCTGCCGTAGAGTTCGCGAAGCTTCTAATCAACCGTTCAGATATGAACGCTCTCCTTGATGCTCATAAAGCAAATGTCAAACAAGCTATCTCCAACCTCACTACTGGAGAACAACATGGACCCCTCGCCGCTGTCATTGTTGACATGTTCTGCACAAACATGATTGATGTTGCCAAAGAATTTTCCGTCCCTGTGTTTGTGTTCTTCACCTCCGGCGTAGCTTTCCTTGGTTTGAATCTCTATATTCAAAATCTCATTGATTCGACACAGTTGATGCAACTCACAGAGCTGTCCATTCCGAGTTTTGCTAATCCGGTTCCTTCAAACTCGTTGCCCAGTGCAGTGCTACGCAAGGAATACAAATCCTTCTTCACGAGCTTCGCCAAAGGCCTCAAGAATGCTGATGGCATTCTTGTCAATTCTTTTGAAGAGCTAGAATCCTATGCGGTTCACTCCTTTTTCTCTCATCCTGAACTAGCTGGTGTACCCATATATCCATGGCTTGATGATCAACCTCCTTCGTCCGTAGTTTTCCTCTGCTTTGGGAGCAGGGGGTCTTTCGATGAGGATCAGATTAAGGAGATTGCATTTGCTATTGAGAACAGTGGGGCACGCTTCGTGTGGTCTCTACGTAAATCCCCACCGAAGGGCACCAAGATTGCGCCATCTGATTACCCTCTTTCTGATTTGGATTCGGTTTTACCTGAAGGGTTCTTAGACCGGACAACAGAGATAGGAAGGCCACTGGAGGATTTGTTTCACATTGTGGCTGGAATTCCACACTCGAGAGCATATATTTTGGTGTGCCCATTGCCACGTGGCCGCTCTTTGCTGAACAACAGACTAATGCTTTTCAATTGGCGTGTGAGTTGA
Protein sequence

>Msa0822320

MKKLEVVFIPIPAVGHLVSAVEFAKLLINRSDMNALLDAHKANVKQAISNLTTGEQHGPLAAVIVDMFCTNMIDVAKEFSVPVFVFFTSGVAFLGLNLYIQNLIDSTQLMQLTELSIPSFANPVPSNSLPSAVLRKEYKSFFTSFAKGLKNADGILVNSFEELESYAVHSFFSHPELAGVPIYPWLDDQPPSSVVFLCFGSRGSFDEDQIKEIAFAIENSGARFVWSLRKSPPKGTKIAPSDYPLSDLDSVLPEGFLDRTTEIGRPLEDLFHIVAGIPHSRAYILVCPLPRGRSLLNNRLMLFNWRVS*