AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0380400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380400 MtrunA17_Chr3g0145941 97.452 314 7 1 1 313 1 314 0.0 626
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380400 AT5G17670.1 68.070 285 84 4 30 313 31 309 9.01e-137 390

Find 268 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGATGTTTGCTTTATT+TGG 0.069780 3_1:+82056994 None:intergenic
TTTCATTCTTCTTGTATTTA+TGG 0.097227 3_1:-82057717 Msa0380400:three_prime_UTR
GAAGATAGTTCAATGGTATT+TGG 0.154350 3_1:+82055920 None:intergenic
GTCTGTATATGCAGCAATTT+GGG 0.178912 3_1:-82058597 Msa0380400:CDS
GAATAAGGTTGGTATATATT+TGG 0.185131 3_1:-82056698 Msa0380400:three_prime_UTR
AGAGAAGGTCCTGTGGTTTC+AGG 0.187842 3_1:+82057054 None:intergenic
ATTTCTGAACTTCAGGATTT+AGG 0.200146 3_1:-82056434 Msa0380400:three_prime_UTR
GACCTATGTCCAACTGCTTT+TGG 0.239513 3_1:+82055666 None:intergenic
TGAAGAGCTTCCTTTCAATT+AGG 0.239569 3_1:+82057094 None:intergenic
CGTCTGTATATGCAGCAATT+TGG 0.240390 3_1:-82058598 Msa0380400:CDS
AAGAGTGCCACGCCAGTAAT+TGG 0.244199 3_1:+82058747 None:intergenic
AATATAATTTGAAAACTTTC+CGG 0.255806 3_1:+82055759 None:intergenic
CTACATATAGAATTATTTAT+TGG 0.259229 3_1:+82056335 None:intergenic
AATGGTATTTGGGAGATTAT+TGG 0.262024 3_1:+82055931 None:intergenic
GCCATTTATTTCTGAACTTC+AGG 0.262303 3_1:-82056441 Msa0380400:three_prime_UTR
CATTCACCTGCTTGTATCCT+TGG 0.277029 3_1:+82058091 None:intergenic
AAGATAGTTCAATGGTATTT+GGG 0.285064 3_1:+82055921 None:intergenic
TTTATGAGATTGAGAACTTT+TGG 0.309051 3_1:-82056547 Msa0380400:three_prime_UTR
ATAACACCAGGGACGCCTTT+TGG 0.317246 3_1:+82058523 None:intergenic
TCAGAGTTGCCTCCAGCTTC+TGG 0.320028 3_1:+82058851 None:intergenic
AATATATACCAACCTTATTC+TGG 0.329607 3_1:+82056701 None:intergenic
TTGGATTTGAGTTTCCAAAA+AGG 0.331624 3_1:+82058229 None:intergenic
TCATGATGTTTGCTTTATTT+GGG 0.333445 3_1:+82056995 None:intergenic
CTGGTTGGTATTGGTGCTTT+TGG 0.334919 3_1:+82057157 None:intergenic
CATCATGTCATTTGCCATCC+TGG 0.335506 3_1:-82056783 Msa0380400:three_prime_UTR
CTTTCTAATCTGTTTGCTAC+TGG 0.335586 3_1:-82057656 Msa0380400:three_prime_UTR
TATTTATTGAACCAGGGGTT+AGG 0.339291 3_1:-82058892 Msa0380400:intron
GAAGAGCTTCCTTTCAATTA+GGG 0.341579 3_1:+82057095 None:intergenic
AGAAAGAGAATGCAAAGAAA+TGG 0.345829 3_1:-82059132 Msa0380400:five_prime_UTR
ACATTGCGTGCTCGCTTTGT+TGG 0.348023 3_1:-82058114 Msa0380400:CDS
ATTGTTATTATGTTAGTAAT+AGG 0.349031 3_1:-82056231 Msa0380400:three_prime_UTR
AGTGAGCATTTGGATGGAAT+TGG 0.358570 3_1:+82059037 None:intergenic
CGATCAAACCAGCGGCATTT+CGG 0.365710 3_1:+82058773 None:intergenic
AGAAGAAGACAGTGAGCATT+TGG 0.366919 3_1:+82059027 None:intergenic
CTAGACATTGCATATTTAGA+AGG 0.367035 3_1:+82056656 None:intergenic
GGAAGTGCAGGCTCAGCATT+TGG 0.368790 3_1:+82058210 None:intergenic
TCCTGAAGTTCAGAAATAAA+TGG 0.369324 3_1:+82056440 None:intergenic
ATATCATTGTTATTAACTCT+TGG 0.371502 3_1:-82058565 Msa0380400:CDS
GTTTGATCGATCCCAATTAC+TGG 0.372683 3_1:-82058759 Msa0380400:CDS
AGTTAATAACAATGATATAT+TGG 0.374538 3_1:+82058570 None:intergenic
ATGTCACACTCACCAGAATA+AGG 0.382491 3_1:-82056713 Msa0380400:three_prime_UTR
CATATTTATATGTTAAGTTC+TGG 0.383673 3_1:-82056289 Msa0380400:three_prime_UTR
TTTGTGGGCAAGCAGATGTA+TGG 0.392192 3_1:-82057950 Msa0380400:CDS
CGGTGCAACATGAGAATAAC+AGG 0.392540 3_1:+82055812 None:intergenic
CGTGCACATATGGCAGATCT+TGG 0.394412 3_1:+82057296 None:intergenic
AACCAACGCCTGTCCTTGAT+TGG 0.395983 3_1:-82058723 Msa0380400:CDS
ATCCATTGTTCCAACACATC+AGG 0.397261 3_1:+82057807 None:intergenic
TAATAATTTCTCAGGTTTGT+GGG 0.400581 3_1:-82057965 Msa0380400:intron
TTGACTTTAAAACAAATTGC+GGG 0.400742 3_1:-82057501 Msa0380400:three_prime_UTR
CTTGGAATTGGTGTCTTTGT+TGG 0.403998 3_1:-82056383 Msa0380400:three_prime_UTR
CGAGCACGCAATGTTATGTT+GGG 0.408081 3_1:+82058123 None:intergenic
TAGGGAAAGAGACAACAAAT+TGG 0.408863 3_1:-82056585 Msa0380400:three_prime_UTR
ATAACCGGATGATGGAGTTC+TGG 0.411644 3_1:+82056964 None:intergenic
CAGTCTCCTCGGGAAGTAGC+TGG 0.414848 3_1:+82058175 None:intergenic
TACATAAACTGAAAGGGAAA+AGG 0.415287 3_1:-82056137 Msa0380400:three_prime_UTR
AATTAGGGAGCCAATGTAAA+GGG 0.416529 3_1:+82057110 None:intergenic
TGTTAACTTGTGGAGCAAAA+TGG 0.418912 3_1:-82059072 Msa0380400:CDS
GAAAGAGAATGCAAAGAAAT+GGG 0.419006 3_1:-82059131 Msa0380400:five_prime_UTR
CATATGGCAGATCTTGGAAT+TGG 0.419770 3_1:+82057302 None:intergenic
TTGAGGTGAGGGGTGTAAAC+AGG 0.422172 3_1:+82058451 None:intergenic
TCAAGATGAGCTGATACTTC+TGG 0.423594 3_1:+82057912 None:intergenic
ACTAGAATATTGTGCTATCA+TGG 0.423994 3_1:-82055860 Msa0380400:three_prime_UTR
TTAAAAGCTCTGGTTGGTAT+TGG 0.428809 3_1:+82057148 None:intergenic
AGTGTTGTTTCGTGCACATA+TGG 0.429109 3_1:+82057286 None:intergenic
ATAATAATTTCTCAGGTTTG+TGG 0.429279 3_1:-82057966 Msa0380400:intron
TTTCCACTAGTGGATGGTAC+TGG 0.429481 3_1:+82056926 None:intergenic
TGTGGTCTTATTCAAGCAAT+AGG 0.433830 3_1:-82055643 Msa0380400:three_prime_UTR
ATTTATTGAACCAGGGGTTA+GGG 0.434184 3_1:-82058891 Msa0380400:intron
TGTACTATTGATACACACTA+TGG 0.439852 3_1:+82055978 None:intergenic
TCAAATTATATTACGTGCAT+AGG 0.440471 3_1:-82055748 Msa0380400:three_prime_UTR
CTATATGTAGTATAGTTCAT+TGG 0.440559 3_1:-82056322 Msa0380400:three_prime_UTR
CGGTGCACTTAACATTTCCC+TGG 0.441926 3_1:-82057889 Msa0380400:CDS
GAAGTATCAGCTCATCTTGA+CGG 0.443659 3_1:-82057909 Msa0380400:CDS
ATGGCAGAGCTCGCCTCACT+TGG 0.443745 3_1:+82057244 None:intergenic
CAGGGGTTAGGGAACAATTC+CGG 0.447536 3_1:-82058880 Msa0380400:CDS
ACTAGTGGATGGTACTGGTC+TGG 0.451671 3_1:+82056931 None:intergenic
TGTGGTTTCAGGTGTGAACT+TGG 0.456134 3_1:+82057065 None:intergenic
TGGGAGTGGTTTAAAAGCTC+TGG 0.459193 3_1:+82057138 None:intergenic
CTCAAGTATGTATGCATAGC+AGG 0.460049 3_1:-82058433 Msa0380400:CDS
ATGACATCATCTGAACCAAC+CGG 0.461617 3_1:+82057849 None:intergenic
GGTGACAATGACGTTTCCTT+TGG 0.465904 3_1:-82057345 Msa0380400:three_prime_UTR
CCACCTCCAAAAGGCGTCCC+TGG 0.469313 3_1:-82058529 Msa0380400:CDS
GCGGCATTTCGGAGCCAATC+AGG 0.471608 3_1:+82058784 None:intergenic
ACAAAATGAAGGTATATTCA+AGG 0.471722 3_1:-82058258 Msa0380400:intron
CTCTCTTCAAATACCAATCA+AGG 0.471850 3_1:+82058710 None:intergenic
ATGGGTGGAGAGGAAGTAAA+GGG 0.472828 3_1:-82059113 Msa0380400:five_prime_UTR
GCGAGCACGCAATGTTATGT+TGG 0.473012 3_1:+82058122 None:intergenic
CGTGCTCGCTTTGTTGGCCA+AGG 0.474939 3_1:-82058108 Msa0380400:CDS
TTTCCAATTCCATTAACAAA+AGG 0.475914 3_1:-82056473 Msa0380400:three_prime_UTR
AGAGTGCCACGCCAGTAATT+GGG 0.476971 3_1:+82058748 None:intergenic
TCTGGTTTCGTCATAATAAC+CGG 0.477309 3_1:+82056949 None:intergenic
TTGGAGATAGAACTTGGAAT+TGG 0.478928 3_1:-82056395 Msa0380400:three_prime_UTR
TACTTGTTGGAGATAGAACT+TGG 0.481501 3_1:-82056401 Msa0380400:three_prime_UTR
ACATAAACTGAAAGGGAAAA+GGG 0.484897 3_1:-82056136 Msa0380400:three_prime_UTR
AGGTCAACATAGGTGGTGGA+TGG 0.489246 3_1:+82057399 None:intergenic
GAGACCACTCTATCATTGAT+TGG 0.491581 3_1:-82058646 Msa0380400:CDS
GCAAACAGATTAGAAAGGCC+AGG 0.491688 3_1:+82057662 None:intergenic
GTCAACATAGGTGGTGGATG+GGG 0.492035 3_1:+82057401 None:intergenic
CATCTTCAAGCTAATTAAAG+AGG 0.492324 3_1:+82057778 None:intergenic
TCCCACTTCTCCCTTTACAT+TGG 0.494088 3_1:-82057120 Msa0380400:three_prime_UTR
TCATTGATTGGTCACTCGGC+TGG 0.494886 3_1:-82058634 Msa0380400:CDS
GGTTATAGTAATCGTGTTTG+AGG 0.495157 3_1:+82057019 None:intergenic
TGCTACTGGTATGTCTATAG+AGG 0.497405 3_1:-82057642 Msa0380400:three_prime_UTR
GATTGGCTCCGAAATGCCGC+TGG 0.497694 3_1:-82058781 Msa0380400:CDS
AGGGAAGCTTTCACTTCCCA+TGG 0.498417 3_1:-82056522 Msa0380400:three_prime_UTR
CACCTCATTGTTGCATTGTG+TGG 0.500114 3_1:+82056857 None:intergenic
ATCACAAAGCAATATTTCCC+TGG 0.502138 3_1:-82057680 Msa0380400:three_prime_UTR
GACGGCGGGCCGATAGTTGT+TGG 0.503129 3_1:+82058991 None:intergenic
GAAGTATCTGTAGGAAGTGC+AGG 0.505483 3_1:+82058198 None:intergenic
AATGGGTGGAGAGGAAGTAA+AGG 0.506529 3_1:-82059114 Msa0380400:five_prime_UTR
GGGAGTGGTAAACTCCATCC+AGG 0.507069 3_1:+82057871 None:intergenic
CTCAGGAGGTGCTAACTCCA+TGG 0.507697 3_1:+82058666 None:intergenic
TATGTAGTGAAGCAAGAGCC+AGG 0.508115 3_1:+82056765 None:intergenic
GGTCAACATAGGTGGTGGAT+GGG 0.508485 3_1:+82057400 None:intergenic
GGAATTGGTGTCTTTGTTGG+AGG 0.508876 3_1:-82056380 Msa0380400:three_prime_UTR
TTTGACTTTAAAACAAATTG+CGG 0.509309 3_1:-82057502 Msa0380400:three_prime_UTR
GGGGAAGGACGAGCGAGAGA+GGG 0.510533 3_1:+82057421 None:intergenic
TCATAGGTCAACATAGGTGG+TGG 0.511524 3_1:+82057395 None:intergenic
GGTCGGGTTATTGATACCAT+TGG 0.515490 3_1:-82057366 Msa0380400:three_prime_UTR
TGGTTGGTTTGGGAGAGACT+AGG 0.515590 3_1:-82056090 Msa0380400:three_prime_UTR
TTGATAATAGCAGTCTCCTC+GGG 0.515621 3_1:+82058165 None:intergenic
AGGTGCACGGGTATACTTGT+TGG 0.517740 3_1:-82056414 Msa0380400:three_prime_UTR
GCACTTAACATTTCCCTGGA+TGG 0.518025 3_1:-82057885 Msa0380400:CDS
TTGGTCACTCGGCTGGAGGA+TGG 0.518671 3_1:-82058627 Msa0380400:CDS
CTGGTGTTATCGATCAAACC+AGG 0.522198 3_1:-82058510 Msa0380400:CDS
ACTTGCTGATATTGTATATG+TGG 0.523747 3_1:-82055785 Msa0380400:three_prime_UTR
AATATTGTTGAACATAATCA+AGG 0.524897 3_1:+82058482 None:intergenic
CCAATCAGGTCTTGACACCT+TGG 0.525622 3_1:+82058798 None:intergenic
CAAAATGAAGGTATATTCAA+GGG 0.525750 3_1:-82058257 Msa0380400:intron
GAATGCATGTGGAGTTTCCA+TGG 0.526463 3_1:+82056505 None:intergenic
TCGGCCCGCCGTCATTCTCC+CGG 0.526986 3_1:-82058981 Msa0380400:intron
ATCAATGATAGAGTGGTCTC+AGG 0.527336 3_1:+82058649 None:intergenic
AGAATTATACATAAACTGAA+AGG 0.527502 3_1:-82056144 Msa0380400:three_prime_UTR
CCCCTGATGTGTTGGAACAA+TGG 0.527934 3_1:-82057809 Msa0380400:CDS
CAGGAGCCCGAGGTGTTGTG+TGG 0.528223 3_1:+82057209 None:intergenic
TACAATATCAGCAAGTATGC+CGG 0.529097 3_1:+82055792 None:intergenic
AGCCAATGTAAAGGGAGAAG+TGG 0.529925 3_1:+82057118 None:intergenic
TTGTGGGCAAGCAGATGTAT+GGG 0.530004 3_1:-82057949 Msa0380400:CDS
TCTATCATTGATTGGTCACT+CGG 0.533151 3_1:-82058638 Msa0380400:CDS
TTCAAATACCAATCAAGGAC+AGG 0.534115 3_1:+82058715 None:intergenic
CCACAGGACCTTCTCTATAA+CGG 0.536446 3_1:-82057047 Msa0380400:three_prime_UTR
TGATGTTTGCTTTATTTGGG+TGG 0.537376 3_1:+82056998 None:intergenic
CAAAGTGGAATGATGTAGGC+AGG 0.537556 3_1:+82057190 None:intergenic
CAATTAGGGAGCCAATGTAA+AGG 0.538764 3_1:+82057109 None:intergenic
CCTCATCATCCACCTCCAAA+AGG 0.539353 3_1:-82058538 Msa0380400:CDS
CTGCTTCCACCAACAACTAT+CGG 0.539905 3_1:-82059000 Msa0380400:CDS
TCCATTGTTCCAACACATCA+GGG 0.540776 3_1:+82057808 None:intergenic
AGGTCTTGCCGTTATAGAGA+AGG 0.542300 3_1:+82057039 None:intergenic
TTCCGGTGACTACCAGAAGC+TGG 0.544893 3_1:-82058863 Msa0380400:CDS
TGCATACATACTTGAGGTGA+GGG 0.545124 3_1:+82058440 None:intergenic
GTTTCAGGTGTGAACTTGGA+TGG 0.545358 3_1:+82057069 None:intergenic
AAATATTGAAGATAGTTCAA+TGG 0.545533 3_1:+82055913 None:intergenic
ATGCAAAGAAATGGGTGGAG+AGG 0.546001 3_1:-82059123 Msa0380400:five_prime_UTR
CTGTTATTCTCATGTTGCAC+CGG 0.546610 3_1:-82055811 Msa0380400:three_prime_UTR
GTATGGTTCCCCTGATGTGT+TGG 0.547140 3_1:-82057817 Msa0380400:CDS
TCGTCATAATAACCGGATGA+TGG 0.547892 3_1:+82056956 None:intergenic
CAAGCAGATGTATGGGGCGA+TGG 0.548229 3_1:-82057942 Msa0380400:CDS
TTTGATAATAGCAGTCTCCT+CGG 0.548689 3_1:+82058164 None:intergenic
CTGGTTTGATCGATAACACC+AGG 0.550685 3_1:+82058511 None:intergenic
CTCCAGCTTCTGGTAGTCAC+CGG 0.551919 3_1:+82058861 None:intergenic
TTGAACCCACACAACACCTC+GGG 0.552718 3_1:-82057215 Msa0380400:three_prime_UTR
CCAAGGTGTCAAGACCTGAT+TGG 0.553014 3_1:-82058798 Msa0380400:CDS
GAAGACAGTGAGCATTTGGA+TGG 0.553333 3_1:+82059031 None:intergenic
AAAGGGAAAAGGGAGGGCAT+TGG 0.553492 3_1:-82056126 Msa0380400:three_prime_UTR
AGGTCAAAGTGGAATGATGT+AGG 0.553939 3_1:+82057186 None:intergenic
TCAACATAGGTGGTGGATGG+GGG 0.558890 3_1:+82057402 None:intergenic
GGATGGAGTTTACCACTCCC+CGG 0.562006 3_1:-82057868 Msa0380400:CDS
GAATTATACATAAACTGAAA+GGG 0.565724 3_1:-82056143 Msa0380400:three_prime_UTR
ATTAATGTAACCACCTCTGT+TGG 0.567097 3_1:-82056009 Msa0380400:three_prime_UTR
GAGACTAACCGGGAGAATGA+CGG 0.567802 3_1:+82058973 None:intergenic
AGTCTCCTCGGGAAGTAGCT+GGG 0.569738 3_1:+82058176 None:intergenic
TAGAAAACTAACAAACCTCT+AGG 0.569758 3_1:+82056057 None:intergenic
AACATAATCAAGGAGACCCC+TGG 0.569925 3_1:+82058492 None:intergenic
ATCGATCCCAATTACTGGCG+TGG 0.571483 3_1:-82058754 Msa0380400:CDS
GGCGGGCCGATAGTTGTTGG+TGG 0.571827 3_1:+82058994 None:intergenic
CATCTGAACCAACCGGGGAG+TGG 0.574033 3_1:+82057856 None:intergenic
ACATTGGCTCCCTAATTGAA+AGG 0.574505 3_1:-82057104 Msa0380400:three_prime_UTR
ATGTTACGTCCAAAAGCAGT+TGG 0.574698 3_1:-82055675 Msa0380400:three_prime_UTR
AGTTGATGATGCTGTTCAAG+AGG 0.575707 3_1:-82058689 Msa0380400:CDS
GAAGGACGAGCGAGAGAGGG+AGG 0.575747 3_1:+82057424 None:intergenic
CGTGTCCACAGTTGTTGCCA+AGG 0.576292 3_1:-82058815 Msa0380400:CDS
ACTTCAGGATTTAGGTGCAC+GGG 0.577376 3_1:-82056426 Msa0380400:three_prime_UTR
CAGGATGGCAAATGACATGA+TGG 0.577562 3_1:+82056784 None:intergenic
ATAGACGGACGCATCTCCGC+TGG 0.578928 3_1:-82059168 None:intergenic
AGGAGCCCGAGGTGTTGTGT+GGG 0.579065 3_1:+82057210 None:intergenic
AACTTCAGGATTTAGGTGCA+CGG 0.579066 3_1:-82056427 Msa0380400:three_prime_UTR
GCCAATGTAAAGGGAGAAGT+GGG 0.579690 3_1:+82057119 None:intergenic
ACAACACTTTGAGTCAACAT+TGG 0.580572 3_1:-82057271 Msa0380400:three_prime_UTR
ATTGAACCCACACAACACCT+CGG 0.585451 3_1:-82057216 Msa0380400:three_prime_UTR
GGAGTTTACCACTCCCCGGT+TGG 0.585654 3_1:-82057864 Msa0380400:CDS
CACACTCACCAGAATAAGGT+TGG 0.586101 3_1:-82056709 Msa0380400:three_prime_UTR
TAGTGAAGCAAGAGCCAGGA+TGG 0.586200 3_1:+82056769 None:intergenic
AACTGCTATGTTACTGCTGT+AGG 0.588651 3_1:-82056172 Msa0380400:three_prime_UTR
GGAAAGAGACAACAAATTGG+AGG 0.589894 3_1:-82056582 Msa0380400:three_prime_UTR
CAGTAGCAAACAGATTAGAA+AGG 0.590323 3_1:+82057657 None:intergenic
TGACATCATCTGAACCAACC+GGG 0.591852 3_1:+82057850 None:intergenic
TGATGCTGTTCAAGAGGCCA+TGG 0.593740 3_1:-82058683 Msa0380400:CDS
GGTTATTCTGCCAACAGAGG+TGG 0.596111 3_1:+82055999 None:intergenic
TGTTGGCCAAGGATACAAGC+AGG 0.599233 3_1:-82058097 Msa0380400:intron
GGAAACGTCATTGTCACCAA+TGG 0.600949 3_1:+82057350 None:intergenic
GATGTCATTAGACCATGGTA+TGG 0.601444 3_1:-82057834 Msa0380400:CDS
TACCAATCAAGGACAGGCGT+TGG 0.602600 3_1:+82058721 None:intergenic
CGAGCAGTGATGTTAACTTG+TGG 0.605981 3_1:-82059082 Msa0380400:exon
TTGATTGGTCACTCGGCTGG+AGG 0.606373 3_1:-82058631 Msa0380400:CDS
CACAATGCAACAATGAGGTG+AGG 0.609573 3_1:-82056854 Msa0380400:three_prime_UTR
TGACACCTTGGCAACAACTG+TGG 0.611400 3_1:+82058810 None:intergenic
TTCTCAATCTCATAAAGTGT+AGG 0.612611 3_1:+82056554 None:intergenic
GTCCAAAAGCAGTTGGACAT+AGG 0.613324 3_1:-82055668 Msa0380400:three_prime_UTR
GACTTTAAAACAAATTGCGG+GGG 0.614576 3_1:-82057499 Msa0380400:three_prime_UTR
CTGCTATGCATACATACTTG+AGG 0.615240 3_1:+82058434 None:intergenic
TGACTTTAAAACAAATTGCG+GGG 0.616636 3_1:-82057500 Msa0380400:three_prime_UTR
ATGCATACATACTTGAGGTG+AGG 0.617128 3_1:+82058439 None:intergenic
AGAGAATGCAAAGAAATGGG+TGG 0.618620 3_1:-82059128 Msa0380400:five_prime_UTR
AGACCAGTACCATCCACTAG+TGG 0.620478 3_1:-82056929 Msa0380400:three_prime_UTR
CAAACAGATTAGAAAGGCCA+GGG 0.620778 3_1:+82057663 None:intergenic
TTCTGGTGAGTGTGACATGT+CGG 0.620930 3_1:+82056718 None:intergenic
GACATGTCGGCGACAAACAG+AGG 0.621300 3_1:+82056731 None:intergenic
TGTAAAGGGAGAAGTGGGAG+TGG 0.624059 3_1:+82057124 None:intergenic
AAAATGAAGGTATATTCAAG+GGG 0.625084 3_1:-82058256 Msa0380400:intron
AGCACGCAATGTTATGTTGG+GGG 0.626405 3_1:+82058125 None:intergenic
GAGATTATTGGACAATAACA+AGG 0.626511 3_1:+82055943 None:intergenic
AGTGGTTTAAAAGCTCTGGT+TGG 0.626654 3_1:+82057142 None:intergenic
CTAGGCTCTCTAATTCCTAG+AGG 0.628084 3_1:-82056072 Msa0380400:three_prime_UTR
GATATTGTATATGTGGCTAC+CGG 0.628197 3_1:-82055778 Msa0380400:three_prime_UTR
AACAAGTTGTTGAATGCATG+TGG 0.629110 3_1:+82056494 None:intergenic
GAGCACGCAATGTTATGTTG+GGG 0.634026 3_1:+82058124 None:intergenic
AATGCATGTGGAGTTTCCAT+GGG 0.634692 3_1:+82056506 None:intergenic
ATGATGTAGGCAGGAGCCCG+AGG 0.636021 3_1:+82057199 None:intergenic
AAGTTCACACCTGAAACCAC+AGG 0.636034 3_1:-82057063 Msa0380400:three_prime_UTR
TACTTCCCAGCTACTTCCCG+AGG 0.636324 3_1:-82058181 Msa0380400:CDS
AGTAGCTGGGAAGTATCTGT+AGG 0.636586 3_1:+82058189 None:intergenic
TGGCGGAAGTGAACGATCAG+CGG 0.637167 3_1:+82056804 None:intergenic
AAACTGAAAGGGAAAAGGGA+GGG 0.638231 3_1:-82056132 Msa0380400:three_prime_UTR
CCGTTATAGAGAAGGTCCTG+TGG 0.639432 3_1:+82057047 None:intergenic
GCAACTCTGAACAATAACTA+CGG 0.639683 3_1:-82058838 Msa0380400:CDS
ACAATGCAACAATGAGGTGA+GGG 0.640849 3_1:-82056853 Msa0380400:three_prime_UTR
TCTGCTGTGAAAGCTCATTG+TGG 0.641729 3_1:+82056894 None:intergenic
GTGACCAATCAATGATAGAG+TGG 0.646895 3_1:+82058642 None:intergenic
CGACAAACAGAGGAAGAGTG+AGG 0.647599 3_1:+82056741 None:intergenic
CAACATTGGAGTGCCAAGTG+AGG 0.648949 3_1:-82057257 Msa0380400:three_prime_UTR
TTTGGTGGTTGAGGTCAAAG+TGG 0.651685 3_1:+82057175 None:intergenic
AATGATAGAGTGGTCTCAGG+AGG 0.654021 3_1:+82058652 None:intergenic
CGGAAGTGAACGATCAGCGG+CGG 0.657749 3_1:+82056807 None:intergenic
TGTGGGCAAGCAGATGTATG+GGG 0.663496 3_1:-82057948 Msa0380400:CDS
AGTATGTATGCATAGCAGGA+AGG 0.664109 3_1:-82058429 Msa0380400:intron
TGGTGTTATCGATCAAACCA+GGG 0.665729 3_1:-82058509 Msa0380400:CDS
CAGATGATGTCATTAGACCA+TGG 0.669037 3_1:-82057839 Msa0380400:CDS
GACATCATCTGAACCAACCG+GGG 0.670989 3_1:+82057851 None:intergenic
GACAAACAGAGGAAGAGTGA+GGG 0.671296 3_1:+82056742 None:intergenic
CTAACCGGGAGAATGACGGC+GGG 0.672855 3_1:+82058977 None:intergenic
TAAACTGAAAGGGAAAAGGG+AGG 0.675752 3_1:-82056133 Msa0380400:three_prime_UTR
TGTGTGGGTTCAATGAAGCA+TGG 0.677511 3_1:+82057225 None:intergenic
GGAGTGGTAAACTCCATCCA+GGG 0.679305 3_1:+82057872 None:intergenic
TCTGTATATGCAGCAATTTG+GGG 0.680712 3_1:-82058596 Msa0380400:CDS
GCATTTGGATGGAATTGGAG+AGG 0.682203 3_1:+82059042 None:intergenic
TCTATTCTACTAGTTACCAG+CGG 0.684416 3_1:+82059152 None:intergenic
AGCAGTTGGACATAGGTCTG+TGG 0.689521 3_1:-82055661 Msa0380400:three_prime_UTR
CCATTGTTCCAACACATCAG+GGG 0.693490 3_1:+82057809 None:intergenic
TGCCACACAATGCAACAATG+AGG 0.694054 3_1:-82056859 Msa0380400:three_prime_UTR
GCATACATACTTGAGGTGAG+GGG 0.697105 3_1:+82058441 None:intergenic
TATGGTTATTCTGCCAACAG+AGG 0.698181 3_1:+82055996 None:intergenic
ACTAACCGGGAGAATGACGG+CGG 0.699406 3_1:+82058976 None:intergenic
GATGGCAAATGACATGATGG+CGG 0.703534 3_1:+82056787 None:intergenic
GGTGTTATCGATCAAACCAG+GGG 0.713378 3_1:-82058508 Msa0380400:CDS
CGGTGACTACCAGAAGCTGG+AGG 0.713933 3_1:-82058860 Msa0380400:CDS
ACATCAGGGGAACCATACCA+TGG 0.720174 3_1:+82057822 None:intergenic
ATTGGGATCGATCAAACCAG+CGG 0.724154 3_1:+82058765 None:intergenic
TGGTTTGATCGATAACACCA+GGG 0.758878 3_1:+82058512 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAATTTTATTATTTA+AGG - chr3_1:82057328-82057347 Msa0380400:three_prime_UTR 0.0%
!! AGTTAATAACAATGATATAT+TGG + chr3_1:82056233-82056252 None:intergenic 15.0%
!! AGAAATTATTATTAGAACTT+TGG + chr3_1:82056826-82056845 None:intergenic 15.0%
!!! ATGAAAATCATTTTCTATAA+TGG + chr3_1:82057069-82057088 None:intergenic 15.0%
!!! TCTACTATTATTTTTTTGTT+AGG - chr3_1:82058170-82058189 Msa0380400:CDS 15.0%
!!! CTACTATTATTTTTTTGTTA+GGG - chr3_1:82058171-82058190 Msa0380400:CDS 15.0%
!! CTACATATAGAATTATTTAT+TGG + chr3_1:82058468-82058487 None:intergenic 15.0%
!!! ATTGTTATTATGTTAGTAAT+AGG - chr3_1:82058569-82058588 Msa0380400:CDS 15.0%
!! AATATAATTTGAAAACTTTC+CGG + chr3_1:82059044-82059063 None:intergenic 15.0%
!!! ATATCATTGTTATTAACTCT+TGG - chr3_1:82056235-82056254 Msa0380400:three_prime_UTR 20.0%
!! AATATTGTTGAACATAATCA+AGG + chr3_1:82056321-82056340 None:intergenic 20.0%
!! TTGTATAGTAAGTTATGTTT+GGG + chr3_1:82056497-82056516 None:intergenic 20.0%
!! ATTGTATAGTAAGTTATGTT+TGG + chr3_1:82056498-82056517 None:intergenic 20.0%
!!! TAGTTTTGGCTATAAATTAA+CGG + chr3_1:82056751-82056770 None:intergenic 20.0%
!! TTAATTTATAGCCAAAACTA+TGG - chr3_1:82056751-82056770 Msa0380400:three_prime_UTR 20.0%
!!! AGTTCTAATAATAATTTCTC+AGG - chr3_1:82056827-82056846 Msa0380400:three_prime_UTR 20.0%
!! TTTCATTCTTCTTGTATTTA+TGG - chr3_1:82057083-82057102 Msa0380400:three_prime_UTR 20.0%
!!! ATAACCTCATTGATATTTTT+AGG - chr3_1:82057183-82057202 Msa0380400:three_prime_UTR 20.0%
!!! TAACCTCATTGATATTTTTA+GGG - chr3_1:82057184-82057203 Msa0380400:three_prime_UTR 20.0%
!!! TTTGACTTTAAAACAAATTG+CGG - chr3_1:82057298-82057317 Msa0380400:three_prime_UTR 20.0%
!! CATATTTATATGTTAAGTTC+TGG - chr3_1:82058511-82058530 Msa0380400:CDS 20.0%
!! AGAATTATACATAAACTGAA+AGG - chr3_1:82058656-82058675 Msa0380400:CDS 20.0%
!! GAATTATACATAAACTGAAA+GGG - chr3_1:82058657-82058676 Msa0380400:CDS 20.0%
!! AAATATTGAAGATAGTTCAA+TGG + chr3_1:82058890-82058909 None:intergenic 20.0%
!!! ATATTTCAATGAATTTTCTC+AGG - chr3_1:82059097-82059116 Msa0380400:five_prime_UTR 20.0%
!! GTTCTTTATTTATTGAACCA+GGG - chr3_1:82055902-82055921 Msa0380400:three_prime_UTR 25.0%
!! TTCTTTATTTATTGAACCAG+GGG - chr3_1:82055903-82055922 Msa0380400:three_prime_UTR 25.0%
!!! TCAAAAAAGACTACTTTTGA+GGG + chr3_1:82056431-82056450 None:intergenic 25.0%
!!! ATCAAAAAAGACTACTTTTG+AGG + chr3_1:82056432-82056451 None:intergenic 25.0%
! CATTTCTTACTACAAAATGA+AGG - chr3_1:82056531-82056550 Msa0380400:three_prime_UTR 25.0%
!! ACAAAATGAAGGTATATTCA+AGG - chr3_1:82056542-82056561 Msa0380400:three_prime_UTR 25.0%
!! CAAAATGAAGGTATATTCAA+GGG - chr3_1:82056543-82056562 Msa0380400:three_prime_UTR 25.0%
!! AAAATGAAGGTATATTCAAG+GGG - chr3_1:82056544-82056563 Msa0380400:three_prime_UTR 25.0%
! ATAATAATTTCTCAGGTTTG+TGG - chr3_1:82056834-82056853 Msa0380400:three_prime_UTR 25.0%
! TAATAATTTCTCAGGTTTGT+GGG - chr3_1:82056835-82056854 Msa0380400:three_prime_UTR 25.0%
!!! TTGACTTTAAAACAAATTGC+GGG - chr3_1:82057299-82057318 Msa0380400:three_prime_UTR 25.0%
! GGATATGTATTTAAAAACGA+AGG - chr3_1:82057349-82057368 Msa0380400:three_prime_UTR 25.0%
!!! ATTTTTTCATAGGTCAACAT+AGG + chr3_1:82057414-82057433 None:intergenic 25.0%
! TATGTTGACCTATGAAAAAA+TGG - chr3_1:82057413-82057432 Msa0380400:three_prime_UTR 25.0%
!!! TCATGATGTTTGCTTTATTT+GGG + chr3_1:82057808-82057827 None:intergenic 25.0%
!! TTCATGATGTTTGCTTTATT+TGG + chr3_1:82057809-82057828 None:intergenic 25.0%
! AATATATACCAACCTTATTC+TGG + chr3_1:82058102-82058121 None:intergenic 25.0%
!!! GAATAAGGTTGGTATATATT+TGG - chr3_1:82058102-82058121 Msa0380400:CDS 25.0%
!!! TTTTTGAGATTGTGACTTTA+GGG - chr3_1:82058197-82058216 Msa0380400:CDS 25.0%
!! TTTATGAGATTGAGAACTTT+TGG - chr3_1:82058253-82058272 Msa0380400:intron 25.0%
! TTTCCAATTCCATTAACAAA+AGG - chr3_1:82058327-82058346 Msa0380400:intron 25.0%
! CTATATGTAGTATAGTTCAT+TGG - chr3_1:82058478-82058497 Msa0380400:CDS 25.0%
!!! GCATTGGTTATTTTATATGT+TGG - chr3_1:82058690-82058709 Msa0380400:CDS 25.0%
!!! TGGTTATTTTATATGTTGGT+TGG - chr3_1:82058694-82058713 Msa0380400:CDS 25.0%
!!! ATTTTATATGTTGGTTGGTT+TGG - chr3_1:82058699-82058718 Msa0380400:CDS 25.0%
!!! TTTTATATGTTGGTTGGTTT+GGG - chr3_1:82058700-82058719 Msa0380400:CDS 25.0%
! AAGATAGTTCAATGGTATTT+GGG + chr3_1:82058882-82058901 None:intergenic 25.0%
! TCAAATTATATTACGTGCAT+AGG - chr3_1:82059052-82059071 Msa0380400:CDS 25.0%
AGAAAGAGAATGCAAAGAAA+TGG - chr3_1:82055668-82055687 Msa0380400:three_prime_UTR 30.0%
GAAAGAGAATGCAAAGAAAT+GGG - chr3_1:82055669-82055688 Msa0380400:three_prime_UTR 30.0%
AAAGAGAAATAGAGACTAAC+CGG + chr3_1:82055841-82055860 None:intergenic 30.0%
! GGTTCTTTATTTATTGAACC+AGG - chr3_1:82055901-82055920 Msa0380400:three_prime_UTR 30.0%
ATAGTAAGTTATGTTTGGGT+TGG + chr3_1:82056493-82056512 None:intergenic 30.0%
! TGGATTTGAGTTTCCAAAAA+GGG + chr3_1:82056573-82056592 None:intergenic 30.0%
! TTGGATTTGAGTTTCCAAAA+AGG + chr3_1:82056574-82056593 None:intergenic 30.0%
TTATTTGCTTGTGATAGATG+CGG - chr3_1:82056788-82056807 Msa0380400:three_prime_UTR 30.0%
CATCTTCAAGCTAATTAAAG+AGG + chr3_1:82057025-82057044 None:intergenic 30.0%
GATCCCTAAAAATATCAATG+AGG + chr3_1:82057190-82057209 None:intergenic 30.0%
!! TGACTTTAAAACAAATTGCG+GGG - chr3_1:82057300-82057319 Msa0380400:three_prime_UTR 30.0%
TTGACCTATGAAAAAATGGT+CGG - chr3_1:82057417-82057436 Msa0380400:three_prime_UTR 30.0%
!! GAAGAAATTTTGATCACCAA+AGG + chr3_1:82057474-82057493 None:intergenic 30.0%
CTAGACATTGCATATTTAGA+AGG + chr3_1:82058147-82058166 None:intergenic 30.0%
!!! GTTTTTGAGATTGTGACTTT+AGG - chr3_1:82058196-82058215 Msa0380400:CDS 30.0%
TTCTCAATCTCATAAAGTGT+AGG + chr3_1:82058249-82058268 None:intergenic 30.0%
!! AGATTGAGAACTTTTGGTTA+GGG - chr3_1:82058259-82058278 Msa0380400:intron 30.0%
TCCTGAAGTTCAGAAATAAA+TGG + chr3_1:82058363-82058382 None:intergenic 30.0%
ATTTCTGAACTTCAGGATTT+AGG - chr3_1:82058366-82058385 Msa0380400:intron 30.0%
TACATAAACTGAAAGGGAAA+AGG - chr3_1:82058663-82058682 Msa0380400:CDS 30.0%
ACATAAACTGAAAGGGAAAA+GGG - chr3_1:82058664-82058683 Msa0380400:CDS 30.0%
TAGAAAACTAACAAACCTCT+AGG + chr3_1:82058746-82058765 None:intergenic 30.0%
!!! AGAGGTTTGTTAGTTTTCTA+TGG - chr3_1:82058746-82058765 Msa0380400:CDS 30.0%
TGTACTATTGATACACACTA+TGG + chr3_1:82058825-82058844 None:intergenic 30.0%
GAGATTATTGGACAATAACA+AGG + chr3_1:82058860-82058879 None:intergenic 30.0%
AATGGTATTTGGGAGATTAT+TGG + chr3_1:82058872-82058891 None:intergenic 30.0%
GAAGATAGTTCAATGGTATT+TGG + chr3_1:82058883-82058902 None:intergenic 30.0%
ACTAGAATATTGTGCTATCA+TGG - chr3_1:82058940-82058959 Msa0380400:intron 30.0%
!!! TGCTATCATGGCTTTTTTAA+AGG - chr3_1:82058952-82058971 Msa0380400:intron 30.0%
! ACTTGCTGATATTGTATATG+TGG - chr3_1:82059015-82059034 Msa0380400:CDS 30.0%
TCTATTCTACTAGTTACCAG+CGG + chr3_1:82055651-82055670 None:intergenic 35.0%
!! TGTTAACTTGTGGAGCAAAA+TGG - chr3_1:82055728-82055747 Msa0380400:three_prime_UTR 35.0%
AAGAGAAATAGAGACTAACC+GGG + chr3_1:82055840-82055859 None:intergenic 35.0%
TATTTATTGAACCAGGGGTT+AGG - chr3_1:82055908-82055927 Msa0380400:three_prime_UTR 35.0%
ATTTATTGAACCAGGGGTTA+GGG - chr3_1:82055909-82055928 Msa0380400:three_prime_UTR 35.0%
GCAACTCTGAACAATAACTA+CGG - chr3_1:82055962-82055981 Msa0380400:three_prime_UTR 35.0%
TTCAAATACCAATCAAGGAC+AGG + chr3_1:82056088-82056107 None:intergenic 35.0%
CTCTCTTCAAATACCAATCA+AGG + chr3_1:82056093-82056112 None:intergenic 35.0%
! TCTATCATTGATTGGTCACT+CGG - chr3_1:82056162-82056181 Msa0380400:three_prime_UTR 35.0%
GTCTGTATATGCAGCAATTT+GGG - chr3_1:82056203-82056222 Msa0380400:three_prime_UTR 35.0%
TCTGTATATGCAGCAATTTG+GGG - chr3_1:82056204-82056223 Msa0380400:three_prime_UTR 35.0%
! GGATTTGAGTTTCCAAAAAG+GGG + chr3_1:82056572-82056591 None:intergenic 35.0%
! TTTGATAATAGCAGTCTCCT+CGG + chr3_1:82056639-82056658 None:intergenic 35.0%
ATCACAAAGCAATATTTCCC+TGG - chr3_1:82057120-82057139 Msa0380400:three_prime_UTR 35.0%
CAGTAGCAAACAGATTAGAA+AGG + chr3_1:82057146-82057165 None:intergenic 35.0%
! CTTTCTAATCTGTTTGCTAC+TGG - chr3_1:82057144-82057163 Msa0380400:three_prime_UTR 35.0%
!! GACTTTAAAACAAATTGCGG+GGG - chr3_1:82057301-82057320 Msa0380400:three_prime_UTR 35.0%
! TTTTCATAGGTCAACATAGG+TGG + chr3_1:82057411-82057430 None:intergenic 35.0%
TGACCTATGAAAAAATGGTC+GGG - chr3_1:82057418-82057437 Msa0380400:three_prime_UTR 35.0%
!!! TAACCCGACCATTTTTTCAT+AGG + chr3_1:82057424-82057443 None:intergenic 35.0%
ACAACACTTTGAGTCAACAT+TGG - chr3_1:82057529-82057548 Msa0380400:three_prime_UTR 35.0%
! TTAAAAGCTCTGGTTGGTAT+TGG + chr3_1:82057655-82057674 None:intergenic 35.0%
AATTAGGGAGCCAATGTAAA+GGG + chr3_1:82057693-82057712 None:intergenic 35.0%
GAAGAGCTTCCTTTCAATTA+GGG + chr3_1:82057708-82057727 None:intergenic 35.0%
TGAAGAGCTTCCTTTCAATT+AGG + chr3_1:82057709-82057728 None:intergenic 35.0%
GGTTATAGTAATCGTGTTTG+AGG + chr3_1:82057784-82057803 None:intergenic 35.0%
!! TGATGTTTGCTTTATTTGGG+TGG + chr3_1:82057805-82057824 None:intergenic 35.0%
! TCTGGTTTCGTCATAATAAC+CGG + chr3_1:82057854-82057873 None:intergenic 35.0%
!!! GAATGTGTTTTTTCCACTAG+TGG + chr3_1:82057887-82057906 None:intergenic 35.0%
TAGGGAAAGAGACAACAAAT+TGG - chr3_1:82058215-82058234 Msa0380400:CDS 35.0%
!! GAGATTGAGAACTTTTGGTT+AGG - chr3_1:82058258-82058277 Msa0380400:intron 35.0%
AACAAGTTGTTGAATGCATG+TGG + chr3_1:82058309-82058328 None:intergenic 35.0%
! CTGCCTTTTGTTAATGGAAT+TGG + chr3_1:82058333-82058352 None:intergenic 35.0%
! AAGTAGCTGCCTTTTGTTAA+TGG + chr3_1:82058339-82058358 None:intergenic 35.0%
!! GCCATTTATTTCTGAACTTC+AGG - chr3_1:82058359-82058378 Msa0380400:intron 35.0%
! TACTTGTTGGAGATAGAACT+TGG - chr3_1:82058399-82058418 Msa0380400:intron 35.0%
TTGGAGATAGAACTTGGAAT+TGG - chr3_1:82058405-82058424 Msa0380400:intron 35.0%
ATTAATGTAACCACCTCTGT+TGG - chr3_1:82058791-82058810 Msa0380400:CDS 35.0%
TACAATATCAGCAAGTATGC+CGG + chr3_1:82059011-82059030 None:intergenic 35.0%
GATATTGTATATGTGGCTAC+CGG - chr3_1:82059022-82059041 Msa0380400:CDS 35.0%
!! TGTGGTCTTATTCAAGCAAT+AGG - chr3_1:82059157-82059176 Msa0380400:five_prime_UTR 35.0%
AGAGAATGCAAAGAAATGGG+TGG - chr3_1:82055672-82055691 Msa0380400:three_prime_UTR 40.0%
AGTGAGCATTTGGATGGAAT+TGG + chr3_1:82055766-82055785 None:intergenic 40.0%
AGAAGAAGACAGTGAGCATT+TGG + chr3_1:82055776-82055795 None:intergenic 40.0%
AACCAAATGAATGCGATGTG+AGG + chr3_1:82055885-82055904 None:intergenic 40.0%
GTTTGATCGATCCCAATTAC+TGG - chr3_1:82056041-82056060 Msa0380400:three_prime_UTR 40.0%
!! AGTTGATGATGCTGTTCAAG+AGG - chr3_1:82056111-82056130 Msa0380400:three_prime_UTR 40.0%
ATCAATGATAGAGTGGTCTC+AGG + chr3_1:82056154-82056173 None:intergenic 40.0%
GAGACCACTCTATCATTGAT+TGG - chr3_1:82056154-82056173 Msa0380400:three_prime_UTR 40.0%
GTGACCAATCAATGATAGAG+TGG + chr3_1:82056161-82056180 None:intergenic 40.0%
CGTCTGTATATGCAGCAATT+TGG - chr3_1:82056202-82056221 Msa0380400:three_prime_UTR 40.0%
TGGTTTGATCGATAACACCA+GGG + chr3_1:82056291-82056310 None:intergenic 40.0%
!! TGGTGTTATCGATCAAACCA+GGG - chr3_1:82056291-82056310 Msa0380400:three_prime_UTR 40.0%
TGCATACATACTTGAGGTGA+GGG + chr3_1:82056363-82056382 None:intergenic 40.0%
ATGCATACATACTTGAGGTG+AGG + chr3_1:82056364-82056383 None:intergenic 40.0%
CTGCTATGCATACATACTTG+AGG + chr3_1:82056369-82056388 None:intergenic 40.0%
CTCAAGTATGTATGCATAGC+AGG - chr3_1:82056367-82056386 Msa0380400:three_prime_UTR 40.0%
AGTATGTATGCATAGCAGGA+AGG - chr3_1:82056371-82056390 Msa0380400:three_prime_UTR 40.0%
AACACACACACACTCTTTCA+AGG - chr3_1:82056395-82056414 Msa0380400:three_prime_UTR 40.0%
!! AAGTTATGTTTGGGTTGGCA+TGG + chr3_1:82056488-82056507 None:intergenic 40.0%
! TTGATAATAGCAGTCTCCTC+GGG + chr3_1:82056638-82056657 None:intergenic 40.0%
! CAGTTTGCACACCATAGTTT+TGG + chr3_1:82056765-82056784 None:intergenic 40.0%
TCAAGATGAGCTGATACTTC+TGG + chr3_1:82056891-82056910 None:intergenic 40.0%
! GAAGTATCAGCTCATCTTGA+CGG - chr3_1:82056891-82056910 Msa0380400:three_prime_UTR 40.0%
ATGACATCATCTGAACCAAC+CGG + chr3_1:82056954-82056973 None:intergenic 40.0%
CAGATGATGTCATTAGACCA+TGG - chr3_1:82056961-82056980 Msa0380400:three_prime_UTR 40.0%
GATGTCATTAGACCATGGTA+TGG - chr3_1:82056966-82056985 Msa0380400:three_prime_UTR 40.0%
TCCATTGTTCCAACACATCA+GGG + chr3_1:82056995-82057014 None:intergenic 40.0%
ATCCATTGTTCCAACACATC+AGG + chr3_1:82056996-82057015 None:intergenic 40.0%
CAAACAGATTAGAAAGGCCA+GGG + chr3_1:82057140-82057159 None:intergenic 40.0%
TGCTACTGGTATGTCTATAG+AGG - chr3_1:82057158-82057177 Msa0380400:three_prime_UTR 40.0%
CATATGGCAGATCTTGGAAT+TGG + chr3_1:82057501-82057520 None:intergenic 40.0%
!! AGTGTTGTTTCGTGCACATA+TGG + chr3_1:82057517-82057536 None:intergenic 40.0%
AGGTCAAAGTGGAATGATGT+AGG + chr3_1:82057617-82057636 None:intergenic 40.0%
! AGTGGTTTAAAAGCTCTGGT+TGG + chr3_1:82057661-82057680 None:intergenic 40.0%
CAATTAGGGAGCCAATGTAA+AGG + chr3_1:82057694-82057713 None:intergenic 40.0%
!! ACATTGGCTCCCTAATTGAA+AGG - chr3_1:82057696-82057715 Msa0380400:three_prime_UTR 40.0%
! TTTTCCAGAACTCCATCATC+CGG - chr3_1:82057832-82057851 Msa0380400:CDS 40.0%
TCGTCATAATAACCGGATGA+TGG + chr3_1:82057847-82057866 None:intergenic 40.0%
!!! GTGTTTTTTCCACTAGTGGA+TGG + chr3_1:82057883-82057902 None:intergenic 40.0%
ACAATGCAACAATGAGGTGA+GGG - chr3_1:82057947-82057966 Msa0380400:CDS 40.0%
ATGTCACACTCACCAGAATA+AGG - chr3_1:82058087-82058106 Msa0380400:intron 40.0%
GGAAAGAGACAACAAATTGG+AGG - chr3_1:82058218-82058237 Msa0380400:CDS 40.0%
AATGCATGTGGAGTTTCCAT+GGG + chr3_1:82058297-82058316 None:intergenic 40.0%
AACTTCAGGATTTAGGTGCA+CGG - chr3_1:82058373-82058392 Msa0380400:intron 40.0%
! CTTGGAATTGGTGTCTTTGT+TGG - chr3_1:82058417-82058436 Msa0380400:intron 40.0%
AACTGCTATGTTACTGCTGT+AGG - chr3_1:82058628-82058647 Msa0380400:CDS 40.0%
TAAACTGAAAGGGAAAAGGG+AGG - chr3_1:82058667-82058686 Msa0380400:CDS 40.0%
AAACTGAAAGGGAAAAGGGA+GGG - chr3_1:82058668-82058687 Msa0380400:CDS 40.0%
TATGGTTATTCTGCCAACAG+AGG + chr3_1:82058807-82058826 None:intergenic 40.0%
CTGTTATTCTCATGTTGCAC+CGG - chr3_1:82058989-82059008 Msa0380400:CDS 40.0%
ATGTTACGTCCAAAAGCAGT+TGG - chr3_1:82059125-82059144 Msa0380400:five_prime_UTR 40.0%
ATGCAAAGAAATGGGTGGAG+AGG - chr3_1:82055677-82055696 Msa0380400:three_prime_UTR 45.0%
AATGGGTGGAGAGGAAGTAA+AGG - chr3_1:82055686-82055705 Msa0380400:three_prime_UTR 45.0%
ATGGGTGGAGAGGAAGTAAA+GGG - chr3_1:82055687-82055706 Msa0380400:three_prime_UTR 45.0%
! CGAGCAGTGATGTTAACTTG+TGG - chr3_1:82055718-82055737 Msa0380400:three_prime_UTR 45.0%
GCATTTGGATGGAATTGGAG+AGG + chr3_1:82055761-82055780 None:intergenic 45.0%
GAAGACAGTGAGCATTTGGA+TGG + chr3_1:82055772-82055791 None:intergenic 45.0%
CTGCTTCCACCAACAACTAT+CGG - chr3_1:82055800-82055819 Msa0380400:three_prime_UTR 45.0%
CTCCTCACATCGCATTCATT+TGG - chr3_1:82055880-82055899 Msa0380400:three_prime_UTR 45.0%
ATTGGGATCGATCAAACCAG+CGG + chr3_1:82056038-82056057 None:intergenic 45.0%
AATGATAGAGTGGTCTCAGG+AGG + chr3_1:82056151-82056170 None:intergenic 45.0%
!! TTTTGGAGGTGGATGATGAG+GGG + chr3_1:82056263-82056282 None:intergenic 45.0%
!! CTTTTGGAGGTGGATGATGA+GGG + chr3_1:82056264-82056283 None:intergenic 45.0%
! CTGGTTTGATCGATAACACC+AGG + chr3_1:82056292-82056311 None:intergenic 45.0%
!! CTGGTGTTATCGATCAAACC+AGG - chr3_1:82056290-82056309 Msa0380400:three_prime_UTR 45.0%
! GGTGTTATCGATCAAACCAG+GGG - chr3_1:82056292-82056311 Msa0380400:three_prime_UTR 45.0%
AACATAATCAAGGAGACCCC+TGG + chr3_1:82056311-82056330 None:intergenic 45.0%
GCATACATACTTGAGGTGAG+GGG + chr3_1:82056362-82056381 None:intergenic 45.0%
! GAAGTATCTGTAGGAAGTGC+AGG + chr3_1:82056605-82056624 None:intergenic 45.0%
!! AGTAGCTGGGAAGTATCTGT+AGG + chr3_1:82056614-82056633 None:intergenic 45.0%
TGTTATGTTGGGGGAAGAAG+TGG + chr3_1:82056669-82056688 None:intergenic 45.0%
AGCACGCAATGTTATGTTGG+GGG + chr3_1:82056678-82056697 None:intergenic 45.0%
GAGCACGCAATGTTATGTTG+GGG + chr3_1:82056679-82056698 None:intergenic 45.0%
CGAGCACGCAATGTTATGTT+GGG + chr3_1:82056680-82056699 None:intergenic 45.0%
CATTCACCTGCTTGTATCCT+TGG + chr3_1:82056712-82056731 None:intergenic 45.0%
TTTGTGGGCAAGCAGATGTA+TGG - chr3_1:82056850-82056869 Msa0380400:three_prime_UTR 45.0%
TTGTGGGCAAGCAGATGTAT+GGG - chr3_1:82056851-82056870 Msa0380400:three_prime_UTR 45.0%
GCACTTAACATTTCCCTGGA+TGG - chr3_1:82056915-82056934 Msa0380400:three_prime_UTR 45.0%
TGACATCATCTGAACCAACC+GGG + chr3_1:82056953-82056972 None:intergenic 45.0%
CCATTGTTCCAACACATCAG+GGG + chr3_1:82056994-82057013 None:intergenic 45.0%
GCAAACAGATTAGAAAGGCC+AGG + chr3_1:82057141-82057160 None:intergenic 45.0%
TCATAGGTCAACATAGGTGG+TGG + chr3_1:82057408-82057427 None:intergenic 45.0%
GGTCGGGTTATTGATACCAT+TGG - chr3_1:82057434-82057453 Msa0380400:three_prime_UTR 45.0%
GGAAACGTCATTGTCACCAA+TGG + chr3_1:82057453-82057472 None:intergenic 45.0%
GGTGACAATGACGTTTCCTT+TGG - chr3_1:82057455-82057474 Msa0380400:three_prime_UTR 45.0%
TGTGTGGGTTCAATGAAGCA+TGG + chr3_1:82057578-82057597 None:intergenic 45.0%
ATTGAACCCACACAACACCT+CGG - chr3_1:82057584-82057603 Msa0380400:three_prime_UTR 45.0%
CAAAGTGGAATGATGTAGGC+AGG + chr3_1:82057613-82057632 None:intergenic 45.0%
! TTTGGTGGTTGAGGTCAAAG+TGG + chr3_1:82057628-82057647 None:intergenic 45.0%
!! ATTGGTGCTTTTGGTGGTTG+AGG + chr3_1:82057637-82057656 None:intergenic 45.0%
!!! GTTGGTATTGGTGCTTTTGG+TGG + chr3_1:82057643-82057662 None:intergenic 45.0%
!!! CTGGTTGGTATTGGTGCTTT+TGG + chr3_1:82057646-82057665 None:intergenic 45.0%
TGGGAGTGGTTTAAAAGCTC+TGG + chr3_1:82057665-82057684 None:intergenic 45.0%
TCCCACTTCTCCCTTTACAT+TGG - chr3_1:82057680-82057699 Msa0380400:three_prime_UTR 45.0%
GCCAATGTAAAGGGAGAAGT+GGG + chr3_1:82057684-82057703 None:intergenic 45.0%
AGCCAATGTAAAGGGAGAAG+TGG + chr3_1:82057685-82057704 None:intergenic 45.0%
! GTTTCAGGTGTGAACTTGGA+TGG + chr3_1:82057734-82057753 None:intergenic 45.0%
! TGTGGTTTCAGGTGTGAACT+TGG + chr3_1:82057738-82057757 None:intergenic 45.0%
AAGTTCACACCTGAAACCAC+AGG - chr3_1:82057737-82057756 Msa0380400:three_prime_UTR 45.0%
CCACAGGACCTTCTCTATAA+CGG - chr3_1:82057753-82057772 Msa0380400:three_prime_UTR 45.0%
AGGTCTTGCCGTTATAGAGA+AGG + chr3_1:82057764-82057783 None:intergenic 45.0%
!! ATAACCGGATGATGGAGTTC+TGG + chr3_1:82057839-82057858 None:intergenic 45.0%
! TTTCCACTAGTGGATGGTAC+TGG + chr3_1:82057877-82057896 None:intergenic 45.0%
TCTGCTGTGAAAGCTCATTG+TGG + chr3_1:82057909-82057928 None:intergenic 45.0%
TGCCACACAATGCAACAATG+AGG - chr3_1:82057941-82057960 Msa0380400:CDS 45.0%
CACCTCATTGTTGCATTGTG+TGG + chr3_1:82057946-82057965 None:intergenic 45.0%
CACAATGCAACAATGAGGTG+AGG - chr3_1:82057946-82057965 Msa0380400:CDS 45.0%
GATGGCAAATGACATGATGG+CGG + chr3_1:82058016-82058035 None:intergenic 45.0%
CAGGATGGCAAATGACATGA+TGG + chr3_1:82058019-82058038 None:intergenic 45.0%
! CATCATGTCATTTGCCATCC+TGG - chr3_1:82058017-82058036 Msa0380400:intron 45.0%
TATGTAGTGAAGCAAGAGCC+AGG + chr3_1:82058038-82058057 None:intergenic 45.0%
GACAAACAGAGGAAGAGTGA+GGG + chr3_1:82058061-82058080 None:intergenic 45.0%
TTCTGGTGAGTGTGACATGT+CGG + chr3_1:82058085-82058104 None:intergenic 45.0%
CACACTCACCAGAATAAGGT+TGG - chr3_1:82058091-82058110 Msa0380400:intron 45.0%
GAATGCATGTGGAGTTTCCA+TGG + chr3_1:82058298-82058317 None:intergenic 45.0%
ACTTCAGGATTTAGGTGCAC+GGG - chr3_1:82058374-82058393 Msa0380400:intron 45.0%
! GGAATTGGTGTCTTTGTTGG+AGG - chr3_1:82058420-82058439 Msa0380400:intron 45.0%
CTAGGCTCTCTAATTCCTAG+AGG - chr3_1:82058728-82058747 Msa0380400:CDS 45.0%
CGGTGCAACATGAGAATAAC+AGG + chr3_1:82058991-82059010 None:intergenic 45.0%
GTCCAAAAGCAGTTGGACAT+AGG - chr3_1:82059132-82059151 Msa0380400:five_prime_UTR 45.0%
! GACCTATGTCCAACTGCTTT+TGG + chr3_1:82059137-82059156 None:intergenic 45.0%
GAGACTAACCGGGAGAATGA+CGG + chr3_1:82055830-82055849 None:intergenic 50.0%
CAGGGGTTAGGGAACAATTC+CGG - chr3_1:82055920-82055939 Msa0380400:three_prime_UTR 50.0%
TGACACCTTGGCAACAACTG+TGG + chr3_1:82055993-82056012 None:intergenic 50.0%
CCAATCAGGTCTTGACACCT+TGG + chr3_1:82056005-82056024 None:intergenic 50.0%
! CCAAGGTGTCAAGACCTGAT+TGG - chr3_1:82056002-82056021 Msa0380400:three_prime_UTR 50.0%
CGATCAAACCAGCGGCATTT+CGG + chr3_1:82056030-82056049 None:intergenic 50.0%
ATCGATCCCAATTACTGGCG+TGG - chr3_1:82056046-82056065 Msa0380400:three_prime_UTR 50.0%
! AGAGTGCCACGCCAGTAATT+GGG + chr3_1:82056055-82056074 None:intergenic 50.0%
!! AAGAGTGCCACGCCAGTAAT+TGG + chr3_1:82056056-82056075 None:intergenic 50.0%
AACCAACGCCTGTCCTTGAT+TGG - chr3_1:82056077-82056096 Msa0380400:three_prime_UTR 50.0%
TACCAATCAAGGACAGGCGT+TGG + chr3_1:82056082-82056101 None:intergenic 50.0%
TGATGCTGTTCAAGAGGCCA+TGG - chr3_1:82056117-82056136 Msa0380400:three_prime_UTR 50.0%
! TCATTGATTGGTCACTCGGC+TGG - chr3_1:82056166-82056185 Msa0380400:three_prime_UTR 50.0%
!! CCTTTTGGAGGTGGATGATG+AGG + chr3_1:82056265-82056284 None:intergenic 50.0%
CCTCATCATCCACCTCCAAA+AGG - chr3_1:82056262-82056281 Msa0380400:three_prime_UTR 50.0%
! ATAACACCAGGGACGCCTTT+TGG + chr3_1:82056280-82056299 None:intergenic 50.0%
! TTGAGGTGAGGGGTGTAAAC+AGG + chr3_1:82056352-82056371 None:intergenic 50.0%
! ATTCAAGGGGCTCCCCTTTT+TGG - chr3_1:82056557-82056576 Msa0380400:three_prime_UTR 50.0%
GCGAGCACGCAATGTTATGT+TGG + chr3_1:82056681-82056700 None:intergenic 50.0%
ACATTGCGTGCTCGCTTTGT+TGG - chr3_1:82056686-82056705 Msa0380400:three_prime_UTR 50.0%
TGTTGGCCAAGGATACAAGC+AGG - chr3_1:82056703-82056722 Msa0380400:three_prime_UTR 50.0%
TGTGGGCAAGCAGATGTATG+GGG - chr3_1:82056852-82056871 Msa0380400:three_prime_UTR 50.0%
CGGTGCACTTAACATTTCCC+TGG - chr3_1:82056911-82056930 Msa0380400:three_prime_UTR 50.0%
GGAGTGGTAAACTCCATCCA+GGG + chr3_1:82056931-82056950 None:intergenic 50.0%
GACATCATCTGAACCAACCG+GGG + chr3_1:82056952-82056971 None:intergenic 50.0%
ACATCAGGGGAACCATACCA+TGG + chr3_1:82056981-82057000 None:intergenic 50.0%
GTATGGTTCCCCTGATGTGT+TGG - chr3_1:82056983-82057002 Msa0380400:three_prime_UTR 50.0%
CCCCTGATGTGTTGGAACAA+TGG - chr3_1:82056991-82057010 Msa0380400:three_prime_UTR 50.0%
!! TCAACATAGGTGGTGGATGG+GGG + chr3_1:82057401-82057420 None:intergenic 50.0%
!! GTCAACATAGGTGGTGGATG+GGG + chr3_1:82057402-82057421 None:intergenic 50.0%
!! GGTCAACATAGGTGGTGGAT+GGG + chr3_1:82057403-82057422 None:intergenic 50.0%
!! AGGTCAACATAGGTGGTGGA+TGG + chr3_1:82057404-82057423 None:intergenic 50.0%
CGTGCACATATGGCAGATCT+TGG + chr3_1:82057507-82057526 None:intergenic 50.0%
! CAACATTGGAGTGCCAAGTG+AGG - chr3_1:82057543-82057562 Msa0380400:three_prime_UTR 50.0%
TTGAACCCACACAACACCTC+GGG - chr3_1:82057585-82057604 Msa0380400:three_prime_UTR 50.0%
TGTAAAGGGAGAAGTGGGAG+TGG + chr3_1:82057679-82057698 None:intergenic 50.0%
AGAGAAGGTCCTGTGGTTTC+AGG + chr3_1:82057749-82057768 None:intergenic 50.0%
CCGTTATAGAGAAGGTCCTG+TGG + chr3_1:82057756-82057775 None:intergenic 50.0%
!! ACTAGTGGATGGTACTGGTC+TGG + chr3_1:82057872-82057891 None:intergenic 50.0%
AGACCAGTACCATCCACTAG+TGG - chr3_1:82057871-82057890 Msa0380400:CDS 50.0%
TAGTGAAGCAAGAGCCAGGA+TGG + chr3_1:82058034-82058053 None:intergenic 50.0%
CGACAAACAGAGGAAGAGTG+AGG + chr3_1:82058062-82058081 None:intergenic 50.0%
AGGGAAGCTTTCACTTCCCA+TGG - chr3_1:82058278-82058297 Msa0380400:intron 50.0%
AGGTGCACGGGTATACTTGT+TGG - chr3_1:82058386-82058405 Msa0380400:intron 50.0%
! AAAGGGAAAAGGGAGGGCAT+TGG - chr3_1:82058674-82058693 Msa0380400:CDS 50.0%
!! TGGTTGGTTTGGGAGAGACT+AGG - chr3_1:82058710-82058729 Msa0380400:CDS 50.0%
GGTTATTCTGCCAACAGAGG+TGG + chr3_1:82058804-82058823 None:intergenic 50.0%
AGCAGTTGGACATAGGTCTG+TGG - chr3_1:82059139-82059158 Msa0380400:five_prime_UTR 50.0%
ACTAACCGGGAGAATGACGG+CGG + chr3_1:82055827-82055846 None:intergenic 55.0%
CGGAATTGTTCCCTAACCCC+TGG + chr3_1:82055922-82055941 None:intergenic 55.0%
TTCCGGTGACTACCAGAAGC+TGG - chr3_1:82055937-82055956 Msa0380400:three_prime_UTR 55.0%
CTCCAGCTTCTGGTAGTCAC+CGG + chr3_1:82055942-82055961 None:intergenic 55.0%
TCAGAGTTGCCTCCAGCTTC+TGG + chr3_1:82055952-82055971 None:intergenic 55.0%
CGTGTCCACAGTTGTTGCCA+AGG - chr3_1:82055985-82056004 Msa0380400:three_prime_UTR 55.0%
!! CTCAGGAGGTGCTAACTCCA+TGG + chr3_1:82056137-82056156 None:intergenic 55.0%
! TTGATTGGTCACTCGGCTGG+AGG - chr3_1:82056169-82056188 Msa0380400:three_prime_UTR 55.0%
! GGAAGTGCAGGCTCAGCATT+TGG + chr3_1:82056593-82056612 None:intergenic 55.0%
TACTTCCCAGCTACTTCCCG+AGG - chr3_1:82056619-82056638 Msa0380400:three_prime_UTR 55.0%
AGTCTCCTCGGGAAGTAGCT+GGG + chr3_1:82056627-82056646 None:intergenic 55.0%
CAAGCAGATGTATGGGGCGA+TGG - chr3_1:82056858-82056877 Msa0380400:three_prime_UTR 55.0%
GGGAGTGGTAAACTCCATCC+AGG + chr3_1:82056932-82056951 None:intergenic 55.0%
GGATGGAGTTTACCACTCCC+CGG - chr3_1:82056932-82056951 Msa0380400:three_prime_UTR 55.0%
TGGCGGAAGTGAACGATCAG+CGG + chr3_1:82057999-82058018 None:intergenic 55.0%
GACATGTCGGCGACAAACAG+AGG + chr3_1:82058072-82058091 None:intergenic 55.0%
CTAACCGGGAGAATGACGGC+GGG + chr3_1:82055826-82055845 None:intergenic 60.0%
CGGTGACTACCAGAAGCTGG+AGG - chr3_1:82055940-82055959 Msa0380400:three_prime_UTR 60.0%
GCGGCATTTCGGAGCCAATC+AGG + chr3_1:82056019-82056038 None:intergenic 60.0%
! GATTGGCTCCGAAATGCCGC+TGG - chr3_1:82056019-82056038 Msa0380400:three_prime_UTR 60.0%
TTGGTCACTCGGCTGGAGGA+TGG - chr3_1:82056173-82056192 Msa0380400:three_prime_UTR 60.0%
! ACACCAGGGACGCCTTTTGG+AGG + chr3_1:82056277-82056296 None:intergenic 60.0%
CAGTCTCCTCGGGAAGTAGC+TGG + chr3_1:82056628-82056647 None:intergenic 60.0%
! CGTGCTCGCTTTGTTGGCCA+AGG - chr3_1:82056692-82056711 Msa0380400:three_prime_UTR 60.0%
GGAGTTTACCACTCCCCGGT+TGG - chr3_1:82056936-82056955 Msa0380400:three_prime_UTR 60.0%
CATCTGAACCAACCGGGGAG+TGG + chr3_1:82056947-82056966 None:intergenic 60.0%
!! CATAGGTGGTGGATGGGGGA+AGG + chr3_1:82057397-82057416 None:intergenic 60.0%
ATGGCAGAGCTCGCCTCACT+TGG + chr3_1:82057559-82057578 None:intergenic 60.0%
!! AGGAGCCCGAGGTGTTGTGT+GGG + chr3_1:82057593-82057612 None:intergenic 60.0%
ATGATGTAGGCAGGAGCCCG+AGG + chr3_1:82057604-82057623 None:intergenic 60.0%
CGGAAGTGAACGATCAGCGG+CGG + chr3_1:82057996-82058015 None:intergenic 60.0%
GGCGGGCCGATAGTTGTTGG+TGG + chr3_1:82055809-82055828 None:intergenic 65.0%
GACGGCGGGCCGATAGTTGT+TGG + chr3_1:82055812-82055831 None:intergenic 65.0%
!! CCAGGGACGCCTTTTGGAGG+TGG + chr3_1:82056274-82056293 None:intergenic 65.0%
!! CCACCTCCAAAAGGCGTCCC+TGG - chr3_1:82056271-82056290 Msa0380400:three_prime_UTR 65.0%
GAAGGACGAGCGAGAGAGGG+AGG + chr3_1:82057379-82057398 None:intergenic 65.0%
GGGGAAGGACGAGCGAGAGA+GGG + chr3_1:82057382-82057401 None:intergenic 65.0%
!! CAGGAGCCCGAGGTGTTGTG+TGG + chr3_1:82057594-82057613 None:intergenic 65.0%
TCGGCCCGCCGTCATTCTCC+CGG - chr3_1:82055819-82055838 Msa0380400:three_prime_UTR 70.0%
GGGGGAAGGACGAGCGAGAG+AGG + chr3_1:82057383-82057402 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 82055641 82059181 82055641 ID=Msa0380400;Name=Msa0380400
chr3_1 mRNA 82055641 82059181 82055641 ID=Msa0380400-mRNA-1;Parent=Msa0380400;Name=Msa0380400-mRNA-1;_AED=0.10;_eAED=0.10;_QI=86|1|1|1|1|1|4|2147|313
chr3_1 exon 82055641 82057973 82055641 ID=Msa0380400-mRNA-1:exon:20938;Parent=Msa0380400-mRNA-1
chr3_1 exon 82058098 82058269 82058098 ID=Msa0380400-mRNA-1:exon:20937;Parent=Msa0380400-mRNA-1
chr3_1 exon 82058430 82058899 82058430 ID=Msa0380400-mRNA-1:exon:20936;Parent=Msa0380400-mRNA-1
chr3_1 exon 82058982 82059181 82058982 ID=Msa0380400-mRNA-1:exon:20935;Parent=Msa0380400-mRNA-1
chr3_1 five_prime_UTR 82059096 82059181 82059096 ID=Msa0380400-mRNA-1:five_prime_utr;Parent=Msa0380400-mRNA-1
chr3_1 CDS 82058982 82059095 82058982 ID=Msa0380400-mRNA-1:cds;Parent=Msa0380400-mRNA-1
chr3_1 CDS 82058430 82058899 82058430 ID=Msa0380400-mRNA-1:cds;Parent=Msa0380400-mRNA-1
chr3_1 CDS 82058098 82058269 82058098 ID=Msa0380400-mRNA-1:cds;Parent=Msa0380400-mRNA-1
chr3_1 CDS 82057788 82057973 82057788 ID=Msa0380400-mRNA-1:cds;Parent=Msa0380400-mRNA-1
chr3_1 three_prime_UTR 82055641 82057787 82055641 ID=Msa0380400-mRNA-1:three_prime_utr;Parent=Msa0380400-mRNA-1
Gene Sequence

>Msa0380400

ATGTTAACTTGTGGAGCAAAATGGATGTCAGCCTCTCCAATTCCATCCAAATGCTCACTGTCTTCTTCTTCATCTGCTTCCACCAACAACTATCGGCCCGCCGTCATTCTCCCGGGGTTAGGGAACAATTCCGGTGACTACCAGAAGCTGGAGGCAACTCTGAACAATAACTACGGCGTGTCCACAGTTGTTGCCAAGGTGTCAAGACCTGATTGGCTCCGAAATGCCGCTGGTTTGATCGATCCCAATTACTGGCGTGGCACTCTTCAACCAACGCCTGTCCTTGATTGGTATTTGAAGAGAGTTGATGATGCTGTTCAAGAGGCCATGGAGTTAGCACCTCCTGAGACCACTCTATCATTGATTGGTCACTCGGCTGGAGGATGGCTTGCGCGTCTGTATATGCAGCAATTTGGGGTGTCCAATATATCATTGTTATTAACTCTTGGAACCCCTCATCATCCACCTCCAAAAGGCGTCCCTGGTGTTATCGATCAAACCAGGGGTCTCCTTGATTATGTTCAACAATATTGCTCTAAACCTGTTTACACCCCTCACCTCAAGTATGTATGCATAGCAGGAAGGTATATTCAAGGGGCTCCCCTTTTTGGAAACTCAAATCCAAATGCTGAGCCTGCACTTCCTACAGATACTTCCCAGCTACTTCCCGAGGAGACTGCTATTATCAAAGCTGCAACCACTTCTTCCCCCAACATAACATTGCGTGCTCGCTTTGTTGGCCAAGGATACAAGCAGGTTTGTGGGCAAGCAGATGTATGGGGCGATGGTGTTGTGCCAGAAGTATCAGCTCATCTTGACGGTGCACTTAACATTTCCCTGGATGGAGTTTACCACTCCCCGGTTGGTTCAGATGATGTCATTAGACCATGGTATGGTTCCCCTGATGTGTTGGAACAATGGATAGAACACCTCTTTAATTAG
Protein sequence

>Msa0380400

MLTCGAKWMSASPIPSKCSLSSSSSASTNNYRPAVILPGLGNNSGDYQKLEATLNNNYGVSTVVAKVSRPDWLRNAAGLIDPNYWRGTLQPTPVLDWYLKRVDDAVQEAMELAPPETTLSLIGHSAGGWLARLYMQQFGVSNISLLLTLGTPHHPPPKGVPGVIDQTRGLLDYVQQYCSKPVYTPHLKYVCIAGRYIQGAPLFGNSNPNAEPALPTDTSQLLPEETAIIKAATTSSPNITLRARFVGQGYKQVCGQADVWGDGVVPEVSAHLDGALNISLDGVYHSPVGSDDVIRPWYGSPDVLEQWIEHLFN*