Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0029520 | 0.864089 | 1.561866e-64 | -8.615850e-47 |
| Msa0002110 | Msa0029520 | 0.856504 | 3.077208e-62 | -8.615850e-47 |
| Msa0011440 | Msa0029520 | 0.808287 | 3.335903e-50 | -8.615850e-47 |
| Msa0011450 | Msa0029520 | 0.804646 | 1.955156e-49 | -8.615850e-47 |
| Msa0017300 | Msa0029520 | 0.813491 | 2.492067e-51 | -8.615850e-47 |
| Msa0029520 | Msa0032930 | 0.806082 | 9.774856e-50 | -8.615850e-47 |
| Msa0029520 | Msa0033840 | 0.924159 | 1.021600e-89 | -8.615850e-47 |
| Msa0029520 | Msa0035050 | 0.826650 | 2.415218e-54 | -8.615850e-47 |
| Msa0029520 | Msa0042950 | 0.800070 | 1.712414e-48 | -8.615850e-47 |
| Msa0029520 | Msa0046020 | 0.809160 | 2.171087e-50 | -8.615850e-47 |
| Msa0029520 | Msa0065670 | 0.835360 | 1.755900e-56 | -8.615850e-47 |
| Msa0029520 | Msa0066890 | 0.824982 | 6.007995e-54 | -8.615850e-47 |
| Msa0029520 | Msa0067370 | 0.830478 | 2.870732e-55 | -8.615850e-47 |
| Msa0029520 | Msa0067590 | 0.877607 | 5.486012e-69 | -8.615850e-47 |
| Msa0029520 | Msa0075990 | 0.840499 | 8.383587e-58 | -8.615850e-47 |
| Msa0029520 | Msa0077570 | 0.810628 | 1.048679e-50 | -8.615850e-47 |
| Msa0029520 | Msa0081610 | 0.907334 | 5.668503e-81 | -8.615850e-47 |
| Msa0029520 | Msa0090510 | -0.815540 | 8.774042e-52 | -8.615850e-47 |
| Msa0029520 | Msa0093950 | 0.862901 | 3.650200e-64 | -8.615850e-47 |
| Msa0029520 | Msa0094170 | 0.835675 | 1.461733e-56 | -8.615850e-47 |
| Msa0029520 | Msa0095810 | 0.854831 | 9.469645e-62 | -8.615850e-47 |
| Msa0029520 | Msa0098500 | 0.801726 | 7.858446e-49 | -8.615850e-47 |
| Msa0029520 | Msa0111110 | 0.861804 | 7.932694e-64 | -8.615850e-47 |
| Msa0029520 | Msa0112550 | 0.817821 | 2.703206e-52 | -8.615850e-47 |
| Msa0029520 | Msa0112880 | 0.836444 | 9.322600e-57 | -8.615850e-47 |
| Msa0029520 | Msa0113370 | 0.824594 | 7.415359e-54 | -8.615850e-47 |
| Msa0029520 | Msa0116780 | 0.804464 | 2.133094e-49 | -8.615850e-47 |
| Msa0029520 | Msa0118700 | 0.808224 | 3.440607e-50 | -8.615850e-47 |
| Msa0029520 | Msa0120100 | 0.820491 | 6.669653e-53 | -8.615850e-47 |
| Msa0029520 | Msa0120160 | 0.829295 | 5.577591e-55 | -8.615850e-47 |
| Msa0029520 | Msa0123800 | -0.808173 | 3.526701e-50 | -8.615850e-47 |
| Msa0029520 | Msa0126750 | 0.814692 | 1.353613e-51 | -8.615850e-47 |
| Msa0029520 | Msa0127350 | 0.807692 | 4.463908e-50 | -8.615850e-47 |
| Msa0029520 | Msa0133140 | 0.831880 | 1.298781e-55 | -8.615850e-47 |
| Msa0029520 | Msa0136870 | 0.845565 | 3.750863e-59 | -8.615850e-47 |
| Msa0029520 | Msa0138990 | 0.812160 | 4.876446e-51 | -8.615850e-47 |
| Msa0029520 | Msa0140770 | 0.814859 | 1.243291e-51 | -8.615850e-47 |
| Msa0029520 | Msa0151510 | 0.817448 | 3.280507e-52 | -8.615850e-47 |
| Msa0029520 | Msa0154880 | 0.821418 | 4.081085e-53 | -8.615850e-47 |
| Msa0029520 | Msa0154890 | 0.821967 | 3.046496e-53 | -8.615850e-47 |
| Msa0029520 | Msa0158890 | 0.832137 | 1.122163e-55 | -8.615850e-47 |
| Msa0029520 | Msa0168770 | 0.870543 | 1.347971e-66 | -8.615850e-47 |
| Msa0029520 | Msa0170630 | -0.804193 | 2.428937e-49 | -8.615850e-47 |
| Msa0029520 | Msa0173950 | 0.895563 | 8.507633e-76 | -8.615850e-47 |
| Msa0029520 | Msa0175240 | 0.800191 | 1.618159e-48 | -8.615850e-47 |
| Msa0029520 | Msa0178840 | 0.824128 | 9.545027e-54 | -8.615850e-47 |
| Msa0029520 | Msa0182940 | 0.815803 | 7.665721e-52 | -8.615850e-47 |
| Msa0029520 | Msa0183910 | -0.805196 | 1.500164e-49 | -8.615850e-47 |
| Msa0029520 | Msa0186400 | 0.806216 | 9.162331e-50 | -8.615850e-47 |
| Msa0029520 | Msa0187590 | 0.873645 | 1.252346e-67 | -8.615850e-47 |
| Msa0029520 | Msa0211590 | 0.817477 | 3.231588e-52 | -8.615850e-47 |
| Msa0029520 | Msa0220400 | 0.851038 | 1.151334e-60 | -8.615850e-47 |
| Msa0029520 | Msa0221850 | 0.882861 | 7.304265e-71 | -8.615850e-47 |
| Msa0029520 | Msa0225190 | 0.817323 | 3.499361e-52 | -8.615850e-47 |
| Msa0029520 | Msa0225790 | 0.845404 | 4.147691e-59 | -8.615850e-47 |
| Msa0029520 | Msa0226260 | -0.805708 | 1.171408e-49 | -8.615850e-47 |
| Msa0029520 | Msa0234410 | 0.808717 | 2.699778e-50 | -8.615850e-47 |
| Msa0029520 | Msa0237690 | 0.835834 | 1.332508e-56 | -8.615850e-47 |
| Msa0029520 | Msa0252150 | 0.826686 | 2.367229e-54 | -8.615850e-47 |
| Msa0029520 | Msa0260580 | 0.844939 | 5.539042e-59 | -8.615850e-47 |
| Msa0029520 | Msa0260640 | 0.839145 | 1.888034e-57 | -8.615850e-47 |
| Msa0029520 | Msa0261350 | 0.827868 | 1.233712e-54 | -8.615850e-47 |
| Msa0029520 | Msa0261660 | 0.827515 | 1.499425e-54 | -8.615850e-47 |
| Msa0029520 | Msa0268210 | 0.802768 | 4.797055e-49 | -8.615850e-47 |
| Msa0029520 | Msa0268350 | 0.800247 | 1.576574e-48 | -8.615850e-47 |
| Msa0029520 | Msa0268450 | 0.828444 | 8.961525e-55 | -8.615850e-47 |
| Msa0029520 | Msa0268670 | 0.838557 | 2.679159e-57 | -8.615850e-47 |
| Msa0029520 | Msa0268880 | 0.805273 | 1.445497e-49 | -8.615850e-47 |
| Msa0029520 | Msa0269090 | 0.822256 | 2.610552e-53 | -8.615850e-47 |
| Msa0029520 | Msa0269170 | 0.813695 | 2.247347e-51 | -8.615850e-47 |
| Msa0029520 | Msa0269220 | 0.818859 | 1.573445e-52 | -8.615850e-47 |
| Msa0029520 | Msa0274310 | 0.832924 | 7.159770e-56 | -8.615850e-47 |
| Msa0029520 | Msa0275250 | 0.815501 | 8.953102e-52 | -8.615850e-47 |
| Msa0029520 | Msa0293720 | -0.807464 | 4.991678e-50 | -8.615850e-47 |
| Msa0029520 | Msa0299130 | 0.816657 | 4.939163e-52 | -8.615850e-47 |
| Msa0029520 | Msa0299530 | 0.831669 | 1.464647e-55 | -8.615850e-47 |
| Msa0029520 | Msa0300130 | 0.802376 | 5.777267e-49 | -8.615850e-47 |
| Msa0029520 | Msa0304730 | -0.803088 | 4.118698e-49 | -8.615850e-47 |
| Msa0029520 | Msa0310720 | 0.800154 | 1.646078e-48 | -8.615850e-47 |
| Msa0029520 | Msa0310730 | 0.828078 | 1.097989e-54 | -8.615850e-47 |
| Msa0029520 | Msa0332190 | -0.815997 | 6.937555e-52 | -8.615850e-47 |
| Msa0029520 | Msa0332200 | -0.818819 | 1.606555e-52 | -8.615850e-47 |
| Msa0029520 | Msa0334450 | 0.821187 | 4.612542e-53 | -8.615850e-47 |
| Msa0029520 | Msa0340700 | 0.829466 | 5.068273e-55 | -8.615850e-47 |
| Msa0029520 | Msa0368210 | 0.828341 | 9.487575e-55 | -8.615850e-47 |
| Msa0029520 | Msa0368450 | 0.829558 | 4.814073e-55 | -8.615850e-47 |
| Msa0029520 | Msa0369080 | 0.803964 | 2.710791e-49 | -8.615850e-47 |
| Msa0029520 | Msa0370580 | 0.812816 | 3.505028e-51 | -8.615850e-47 |
| Msa0029520 | Msa0375330 | 0.812952 | 3.272596e-51 | -8.615850e-47 |
| Msa0029520 | Msa0378440 | 0.804234 | 2.382465e-49 | -8.615850e-47 |
| Msa0029520 | Msa0380400 | 0.869965 | 2.084722e-66 | -8.615850e-47 |
| Msa0029520 | Msa0380450 | 0.824204 | 9.162822e-54 | -8.615850e-47 |
| Msa0029520 | Msa0382060 | 0.803272 | 3.773986e-49 | -8.615850e-47 |
| Msa0029520 | Msa0383870 | 0.849419 | 3.272576e-60 | -8.615850e-47 |
| Msa0029520 | Msa0385930 | 0.826347 | 2.851092e-54 | -8.615850e-47 |
| Msa0029520 | Msa0387630 | 0.807083 | 6.011403e-50 | -8.615850e-47 |
| Msa0029520 | Msa0389080 | 0.862481 | 4.916717e-64 | -8.615850e-47 |
| Msa0029520 | Msa0397420 | 0.831886 | 1.294140e-55 | -8.615850e-47 |
| Msa0029520 | Msa0398600 | 0.803464 | 3.443091e-49 | -8.615850e-47 |
| Msa0029520 | Msa0403470 | 0.808163 | 3.544174e-50 | -8.615850e-47 |
| Msa0029520 | Msa0405460 | 0.806905 | 6.554592e-50 | -8.615850e-47 |
| Msa0029520 | Msa0405470 | 0.837954 | 3.830561e-57 | -8.615850e-47 |
| Msa0029520 | Msa0405550 | 0.837713 | 4.419613e-57 | -8.615850e-47 |
| Msa0029520 | Msa0415160 | 0.805075 | 1.590167e-49 | -8.615850e-47 |
| Msa0029520 | Msa0415760 | 0.803758 | 2.992611e-49 | -8.615850e-47 |
| Msa0029520 | Msa0427600 | 0.805199 | 1.497746e-49 | -8.615850e-47 |
| Msa0029520 | Msa0435130 | 0.816777 | 4.643284e-52 | -8.615850e-47 |
| Msa0029520 | Msa0436300 | 0.802423 | 5.650984e-49 | -8.615850e-47 |
| Msa0029520 | Msa0436660 | 0.804581 | 2.017028e-49 | -8.615850e-47 |
| Msa0029520 | Msa0437820 | 0.815990 | 6.965727e-52 | -8.615850e-47 |
| Msa0029520 | Msa0449910 | 0.851346 | 9.423909e-61 | -8.615850e-47 |
| Msa0029520 | Msa0450890 | 0.807077 | 6.027226e-50 | -8.615850e-47 |
| Msa0029520 | Msa0460510 | 0.806572 | 7.708720e-50 | -8.615850e-47 |
| Msa0029520 | Msa0461620 | 0.835250 | 1.871424e-56 | -8.615850e-47 |
| Msa0029520 | Msa0463030 | 0.817007 | 4.121835e-52 | -8.615850e-47 |
| Msa0029520 | Msa0476170 | 0.861441 | 1.023877e-63 | -8.615850e-47 |
| Msa0029520 | Msa0476890 | 0.847010 | 1.515467e-59 | -8.615850e-47 |
| Msa0029520 | Msa0478740 | 0.805195 | 1.501075e-49 | -8.615850e-47 |
| Msa0029520 | Msa0479760 | 0.812307 | 4.528421e-51 | -8.615850e-47 |
| Msa0029520 | Msa0480090 | 0.832079 | 1.159790e-55 | -8.615850e-47 |
| Msa0029520 | Msa0483970 | 0.825866 | 3.710319e-54 | -8.615850e-47 |
| Msa0029520 | Msa0493180 | 0.875925 | 2.098324e-68 | -8.615850e-47 |
| Msa0029520 | Msa0500610 | 0.806862 | 6.692667e-50 | -8.615850e-47 |
| Msa0029520 | Msa0500700 | 0.803847 | 2.867051e-49 | -8.615850e-47 |
| Msa0029520 | Msa0506700 | 0.803387 | 3.571103e-49 | -8.615850e-47 |
| Msa0029520 | Msa0507960 | 0.819535 | 1.103754e-52 | -8.615850e-47 |
| Msa0029520 | Msa0518150 | 0.801052 | 1.079867e-48 | -8.615850e-47 |
| Msa0029520 | Msa0521260 | 0.817252 | 3.631286e-52 | -8.615850e-47 |
| Msa0029520 | Msa0523420 | 0.816628 | 5.013553e-52 | -8.615850e-47 |
| Msa0029520 | Msa0523430 | 0.814040 | 1.886339e-51 | -8.615850e-47 |
| Msa0029520 | Msa0523490 | 0.808458 | 3.066773e-50 | -8.615850e-47 |
| Msa0029520 | Msa0526520 | 0.800812 | 1.209172e-48 | -8.615850e-47 |
| Msa0029520 | Msa0548650 | 0.863251 | 2.845158e-64 | -8.615850e-47 |
| Msa0029520 | Msa0550980 | 0.815808 | 7.645919e-52 | -8.615850e-47 |
| Msa0029520 | Msa0550990 | 0.843783 | 1.132894e-58 | -8.615850e-47 |
| Msa0029520 | Msa0556700 | 0.802534 | 5.361442e-49 | -8.615850e-47 |
| Msa0029520 | Msa0556760 | 0.810570 | 1.079351e-50 | -8.615850e-47 |
| Msa0029520 | Msa0557440 | 0.808796 | 2.597674e-50 | -8.615850e-47 |
| Msa0029520 | Msa0559450 | 0.817870 | 2.635052e-52 | -8.615850e-47 |
| Msa0029520 | Msa0565370 | 0.813438 | 2.559367e-51 | -8.615850e-47 |
| Msa0029520 | Msa0565430 | 0.805894 | 1.070942e-49 | -8.615850e-47 |
| Msa0029520 | Msa0566940 | 0.812316 | 4.508395e-51 | -8.615850e-47 |
| Msa0029520 | Msa0569580 | 0.804855 | 1.768171e-49 | -8.615850e-47 |
| Msa0029520 | Msa0576020 | 0.866718 | 2.322964e-65 | -8.615850e-47 |
| Msa0029520 | Msa0576080 | 0.830475 | 2.876848e-55 | -8.615850e-47 |
| Msa0029520 | Msa0576120 | 0.850973 | 1.200356e-60 | -8.615850e-47 |
| Msa0029520 | Msa0580410 | 0.804398 | 2.202507e-49 | -8.615850e-47 |
| Msa0029520 | Msa0580890 | 0.803453 | 3.461174e-49 | -8.615850e-47 |
| Msa0029520 | Msa0581090 | 0.800182 | 1.624855e-48 | -8.615850e-47 |
| Msa0029520 | Msa0582860 | 0.800205 | 1.607852e-48 | -8.615850e-47 |
| Msa0029520 | Msa0590620 | 0.832570 | 8.765310e-56 | -8.615850e-47 |
| Msa0029520 | Msa0591340 | 0.804023 | 2.635052e-49 | -8.615850e-47 |
| Msa0029520 | Msa0592330 | -0.819448 | 1.155234e-52 | -8.615850e-47 |
| Msa0029520 | Msa0603690 | 0.824307 | 8.664829e-54 | -8.615850e-47 |
| Msa0029520 | Msa0605040 | 0.845310 | 4.399204e-59 | -8.615850e-47 |
| Msa0029520 | Msa0605160 | 0.844835 | 5.910655e-59 | -8.615850e-47 |
| Msa0029520 | Msa0605210 | 0.800505 | 1.396644e-48 | -8.615850e-47 |
| Msa0029520 | Msa0606340 | 0.824525 | 7.700264e-54 | -8.615850e-47 |
| Msa0029520 | Msa0606350 | 0.849222 | 3.714969e-60 | -8.615850e-47 |
| Msa0029520 | Msa0606640 | 0.807316 | 5.365657e-50 | -8.615850e-47 |
| Msa0029520 | Msa0626920 | -0.819084 | 1.398099e-52 | -8.615850e-47 |
| Msa0029520 | Msa0630910 | 0.807139 | 5.847595e-50 | -8.615850e-47 |
| Msa0029520 | Msa0637930 | 0.892159 | 2.052150e-74 | -8.615850e-47 |
| Msa0029520 | Msa0638010 | 0.866082 | 3.697506e-65 | -8.615850e-47 |
| Msa0029520 | Msa0649160 | 0.844484 | 7.347937e-59 | -8.615850e-47 |
| Msa0029520 | Msa0651000 | 0.821354 | 4.222792e-53 | -8.615850e-47 |
| Msa0029520 | Msa0661540 | 0.808386 | 3.176854e-50 | -8.615850e-47 |
| Msa0029520 | Msa0686950 | 0.862945 | 3.537607e-64 | -8.615850e-47 |
| Msa0029520 | Msa0690100 | 0.810925 | 9.043591e-51 | -8.615850e-47 |
| Msa0029520 | Msa0695250 | 0.810013 | 1.423133e-50 | -8.615850e-47 |
| Msa0029520 | Msa0711110 | 0.812493 | 4.123340e-51 | -8.615850e-47 |
| Msa0029520 | Msa0739820 | 0.821820 | 3.295103e-53 | -8.615850e-47 |
| Msa0029520 | Msa0742370 | 0.825729 | 3.999352e-54 | -8.615850e-47 |
| Msa0029520 | Msa0744640 | -0.800335 | 1.512208e-48 | -8.615850e-47 |
| Msa0029520 | Msa0779450 | 0.835525 | 1.595122e-56 | -8.615850e-47 |
| Msa0029520 | Msa0788450 | 0.828090 | 1.090347e-54 | -8.615850e-47 |
| Msa0029520 | Msa0793130 | 0.805491 | 1.301325e-49 | -8.615850e-47 |
| Msa0029520 | Msa0795910 | 0.803951 | 2.727503e-49 | -8.615850e-47 |
| Msa0029520 | Msa0796580 | 0.818323 | 2.080947e-52 | -8.615850e-47 |
| Msa0029520 | Msa0820130 | 0.825025 | 5.869606e-54 | -8.615850e-47 |
| Msa0029520 | Msa0822320 | 0.815327 | 9.786705e-52 | -8.615850e-47 |
| Msa0029520 | Msa0823480 | 0.806531 | 7.862390e-50 | -8.615850e-47 |
| Msa0029520 | Msa0825570 | 0.828055 | 1.111877e-54 | -8.615850e-47 |
| Msa0029520 | Msa0826540 | 0.826327 | 2.882769e-54 | -8.615850e-47 |
| Msa0029520 | Msa0827520 | 0.859278 | 4.618643e-63 | -8.615850e-47 |
| Msa0029520 | Msa0829210 | 0.841069 | 5.942112e-58 | -8.615850e-47 |
| Msa0029520 | Msa0829250 | 0.825325 | 4.986159e-54 | -8.615850e-47 |
| Msa0029520 | Msa0832160 | 0.802328 | 5.910980e-49 | -8.615850e-47 |
| Msa0029520 | Msa0833360 | 0.802316 | 5.945263e-49 | -8.615850e-47 |
| Msa0029520 | Msa0833950 | 0.846782 | 1.749442e-59 | -8.615850e-47 |
| Msa0029520 | Msa0860630 | 0.815562 | 8.677465e-52 | -8.615850e-47 |
| Msa0029520 | Msa0862480 | 0.830753 | 2.459089e-55 | -8.615850e-47 |
| Msa0029520 | Msa0864820 | 0.844534 | 7.124008e-59 | -8.615850e-47 |
| Msa0029520 | Msa0866060 | 0.812490 | 4.130999e-51 | -8.615850e-47 |
| Msa0029520 | Msa0867660 | 0.816607 | 5.069247e-52 | -8.615850e-47 |
| Msa0029520 | Msa0868500 | 0.803686 | 3.096763e-49 | -8.615850e-47 |
| Msa0029520 | Msa0868510 | 0.811259 | 7.656002e-51 | -8.615850e-47 |
| Msa0029520 | Msa0869420 | 0.842253 | 2.894581e-58 | -8.615850e-47 |
| Msa0029520 | Msa0881530 | 0.862491 | 4.880254e-64 | -8.615850e-47 |
| Msa0029520 | Msa0881880 | 0.806877 | 6.643610e-50 | -8.615850e-47 |
| Msa0029520 | Msa0882480 | 0.817452 | 3.273758e-52 | -8.615850e-47 |
| Msa0029520 | Msa0908260 | 0.812809 | 3.516175e-51 | -8.615850e-47 |
| Msa0029520 | Msa0908470 | 0.812045 | 5.165289e-51 | -8.615850e-47 |
| Msa0029520 | Msa0908510 | 0.811961 | 5.388696e-51 | -8.615850e-47 |
| Msa0029520 | Msa0908630 | 0.824548 | 7.606217e-54 | -8.615850e-47 |
| Msa0029520 | Msa0908690 | 0.808191 | 3.496329e-50 | -8.615850e-47 |
| Msa0029520 | Msa0908700 | 0.809168 | 2.161663e-50 | -8.615850e-47 |
| Msa0029520 | Msa0919120 | 0.870263 | 1.664883e-66 | -8.615850e-47 |
| Msa0029520 | Msa0924840 | 0.845741 | 3.362226e-59 | -8.615850e-47 |
| Msa0029520 | Msa0924900 | 0.813405 | 2.602471e-51 | -8.615850e-47 |
| Msa0029520 | Msa0924980 | 0.845647 | 3.564246e-59 | -8.615850e-47 |
| Msa0029520 | Msa0925030 | 0.876438 | 1.396153e-68 | -8.615850e-47 |
| Msa0029520 | Msa0931000 | 0.873995 | 9.544086e-68 | -8.615850e-47 |
| Msa0029520 | Msa0940910 | -0.801618 | 8.270984e-49 | -8.615850e-47 |
| Msa0029520 | Msa0945160 | 0.805526 | 1.279350e-49 | -8.615850e-47 |
| Msa0029520 | Msa0945520 | 0.801394 | 9.193295e-49 | -8.615850e-47 |
| Msa0029520 | Msa0946110 | -0.807713 | 4.418951e-50 | -8.615850e-47 |
| Msa0029520 | Msa0969380 | -0.808913 | 2.451260e-50 | -8.615850e-47 |
| Msa0029520 | Msa0969720 | -0.822227 | 2.652285e-53 | -8.615850e-47 |
| Msa0029520 | Msa0971690 | 0.837865 | 4.039965e-57 | -8.615850e-47 |
| Msa0029520 | Msa0978550 | 0.812473 | 4.165176e-51 | -8.615850e-47 |
| Msa0029520 | Msa0982090 | 0.869922 | 2.152976e-66 | -8.615850e-47 |
| Msa0029520 | Msa0983600 | 0.820904 | 5.360460e-53 | -8.615850e-47 |
| Msa0029520 | Msa0983610 | 0.811013 | 8.654590e-51 | -8.615850e-47 |
| Msa0029520 | Msa1002550 | 0.802719 | 4.910118e-49 | -8.615850e-47 |
| Msa0029520 | Msa1016580 | 0.805222 | 1.481811e-49 | -8.615850e-47 |
| Msa0029520 | Msa1020210 | -0.807081 | 6.015095e-50 | -8.615850e-47 |
| Msa0029520 | Msa1031190 | 0.818386 | 2.013716e-52 | -8.615850e-47 |
| Msa0029520 | Msa1031460 | -0.810068 | 1.385460e-50 | -8.615850e-47 |
| Msa0029520 | Msa1032790 | 0.823113 | 1.649569e-53 | -8.615850e-47 |
| Msa0029520 | Msa1039190 | 0.830857 | 2.318195e-55 | -8.615850e-47 |
| Msa0029520 | Msa1039440 | 0.817220 | 3.691891e-52 | -8.615850e-47 |
| Msa0029520 | Msa1070370 | 0.817068 | 3.994926e-52 | -8.615850e-47 |
| Msa0029520 | Msa1070540 | -0.806308 | 8.761964e-50 | -8.615850e-47 |
| Msa0029520 | Msa1080610 | 0.822230 | 2.647153e-53 | -8.615850e-47 |
| Msa0029520 | Msa1080680 | 0.820579 | 6.366397e-53 | -8.615850e-47 |
| Msa0029520 | Msa1085610 | 0.834326 | 3.197653e-56 | -8.615850e-47 |
| Msa0029520 | Msa1086490 | 0.831155 | 1.959724e-55 | -8.615850e-47 |
| Msa0029520 | Msa1086670 | 0.833311 | 5.737428e-56 | -8.615850e-47 |
| Msa0029520 | Msa1086760 | 0.819811 | 9.547527e-53 | -8.615850e-47 |
| Msa0029520 | Msa1086770 | 0.807768 | 4.301887e-50 | -8.615850e-47 |
| Msa0029520 | Msa1086840 | 0.807777 | 4.282318e-50 | -8.615850e-47 |
| Msa0029520 | Msa1086940 | 0.807808 | 4.217866e-50 | -8.615850e-47 |
| Msa0029520 | Msa1087070 | 0.813486 | 2.498432e-51 | -8.615850e-47 |
| Msa0029520 | Msa1087090 | 0.812249 | 4.662222e-51 | -8.615850e-47 |
| Msa0029520 | Msa1091710 | 0.841254 | 5.313806e-58 | -8.615850e-47 |
| Msa0029520 | Msa1101240 | -0.811351 | 7.313003e-51 | -8.615850e-47 |
| Msa0029520 | Msa1117770 | 0.808094 | 3.666636e-50 | -8.615850e-47 |
| Msa0029520 | Msa1119420 | 0.822122 | 2.804792e-53 | -8.615850e-47 |
| Msa0029520 | Msa1121720 | 0.809898 | 1.507268e-50 | -8.615850e-47 |
| Msa0029520 | Msa1123440 | 0.800188 | 1.620070e-48 | -8.615850e-47 |
| Msa0029520 | Msa1126320 | 0.809880 | 1.520495e-50 | -8.615850e-47 |
| Msa0029520 | Msa1128610 | 0.807818 | 4.197115e-50 | -8.615850e-47 |
| Msa0029520 | Msa1129120 | 0.809526 | 1.811870e-50 | -8.615850e-47 |
| Msa0029520 | Msa1129300 | 0.872619 | 2.768131e-67 | -8.615850e-47 |
| Msa0029520 | Msa1132880 | 0.801996 | 6.918014e-49 | -8.615850e-47 |
| Msa0029520 | Msa1150960 | -0.824565 | 7.532749e-54 | -8.615850e-47 |
| Msa0029520 | Msa1156120 | 0.817131 | 3.866835e-52 | -8.615850e-47 |
| Msa0029520 | Msa1157860 | 0.800260 | 1.566488e-48 | -8.615850e-47 |
| Msa0029520 | Msa1158180 | 0.819778 | 9.713456e-53 | -8.615850e-47 |
| Msa0029520 | Msa1167150 | 0.824915 | 6.229956e-54 | -8.615850e-47 |
| Msa0029520 | Msa1190100 | 0.834806 | 2.422388e-56 | -8.615850e-47 |
| Msa0029520 | Msa1197740 | 0.827176 | 1.807702e-54 | -8.615850e-47 |
| Msa0029520 | Msa1199540 | 0.815899 | 7.297997e-52 | -8.615850e-47 |
| Msa0029520 | Msa1207920 | 0.835169 | 1.962608e-56 | -8.615850e-47 |
| Msa0029520 | Msa1209870 | 0.807350 | 5.277332e-50 | -8.615850e-47 |
| Msa0029520 | Msa1212150 | 0.806748 | 7.076518e-50 | -8.615850e-47 |
| Msa0029520 | Msa1212210 | 0.812563 | 3.981862e-51 | -8.615850e-47 |
| Msa0029520 | Msa1236120 | 0.814563 | 1.445760e-51 | -8.615850e-47 |
| Msa0029520 | Msa1251440 | 0.833719 | 4.537678e-56 | -8.615850e-47 |
| Msa0029520 | Msa1258030 | 0.856913 | 2.332074e-62 | -8.615850e-47 |
| Msa0029520 | Msa1260640 | 0.812660 | 3.792061e-51 | -8.615850e-47 |
| Msa0029520 | Msa1266750 | 0.808882 | 2.489147e-50 | -8.615850e-47 |
| Msa0029520 | Msa1273620 | 0.862314 | 5.530717e-64 | -8.615850e-47 |
| Msa0029520 | Msa1279200 | 0.809813 | 1.571416e-50 | -8.615850e-47 |
| Msa0029520 | Msa1279250 | 0.816321 | 5.874209e-52 | -8.615850e-47 |
| Msa0029520 | Msa1303690 | 0.800020 | 1.753061e-48 | -8.615850e-47 |
| Msa0029520 | Msa1305970 | 0.812817 | 3.502858e-51 | -8.615850e-47 |
| Msa0029520 | Msa1311600 | 0.847623 | 1.028715e-59 | -8.615850e-47 |
| Msa0029520 | Msa1325410 | 0.802953 | 4.392503e-49 | -8.615850e-47 |
| Msa0029520 | Msa1325560 | 0.833971 | 3.924974e-56 | -8.615850e-47 |
| Msa0029520 | Msa1328680 | 0.817396 | 3.370182e-52 | -8.615850e-47 |
| Msa0029520 | Msa1333220 | 0.808356 | 3.224363e-50 | -8.615850e-47 |
| Msa0029520 | Msa1341710 | 0.805947 | 1.043538e-49 | -8.615850e-47 |
| Msa0029520 | Msa1342960 | 0.850382 | 1.761142e-60 | -8.615850e-47 |
| Msa0029520 | Msa1348170 | 0.807886 | 4.059662e-50 | -8.615850e-47 |
| Msa0029520 | Msa1354360 | 0.805546 | 1.266958e-49 | -8.615850e-47 |
| Msa0029520 | Msa1354400 | 0.812312 | 4.516967e-51 | -8.615850e-47 |
| Msa0029520 | Msa1354520 | 0.807216 | 5.632565e-50 | -8.615850e-47 |
| Msa0029520 | Msa1354530 | 0.811117 | 8.219890e-51 | -8.615850e-47 |
| Msa0029520 | Msa1354650 | 0.809084 | 2.253541e-50 | -8.615850e-47 |
| Msa0029520 | Msa1354660 | 0.810893 | 9.192435e-51 | -8.615850e-47 |
| Msa0029520 | Msa1354780 | 0.807904 | 4.024758e-50 | -8.615850e-47 |
| Msa0029520 | Msa1354790 | 0.811466 | 6.904969e-51 | -8.615850e-47 |
| Msa0029520 | Msa1354960 | 0.812006 | 5.267495e-51 | -8.615850e-47 |
| Msa0029520 | Msa1356100 | 0.807609 | 4.649100e-50 | -8.615850e-47 |
| Msa0029520 | Msa1356600 | 0.807112 | 5.927121e-50 | -8.615850e-47 |
| Msa0029520 | Msa1361670 | 0.813641 | 2.309886e-51 | -8.615850e-47 |
| Msa0029520 | Msa1363310 | 0.801234 | 9.914065e-49 | -8.615850e-47 |
| Msa0029520 | Msa1364350 | 0.848312 | 6.640082e-60 | -8.615850e-47 |
| Msa0029520 | Msa1365030 | 0.812427 | 4.263986e-51 | -8.615850e-47 |
| Msa0029520 | Msa1365990 | 0.812346 | 4.440398e-51 | -8.615850e-47 |
| Msa0029520 | Msa1366020 | 0.812251 | 4.656324e-51 | -8.615850e-47 |
| Msa0029520 | Msa1366030 | 0.809487 | 1.846903e-50 | -8.615850e-47 |
| Msa0029520 | Msa1366060 | 0.810308 | 1.229481e-50 | -8.615850e-47 |
| Msa0029520 | Msa1367400 | 0.808617 | 2.836633e-50 | -8.615850e-47 |
| Msa0029520 | Msa1368260 | 0.810893 | 9.192435e-51 | -8.615850e-47 |
| Msa0029520 | Msa1372770 | 0.847849 | 8.914400e-60 | -8.615850e-47 |
| Msa0029520 | Msa1373420 | 0.803191 | 3.921796e-49 | -8.615850e-47 |
| Msa0029520 | Msa1375610 | 0.869615 | 2.712067e-66 | -8.615850e-47 |
| Msa0029520 | Msa1376550 | 0.866372 | 2.992943e-65 | -8.615850e-47 |
| Msa0029520 | Msa1382380 | 0.867355 | 1.454553e-65 | -8.615850e-47 |
| Msa0029520 | Msa1385360 | 0.815306 | 9.892672e-52 | -8.615850e-47 |
| Msa0029520 | Msa1385390 | 0.818579 | 1.821043e-52 | -8.615850e-47 |
| Msa0029520 | Msa1386580 | 0.801032 | 1.090097e-48 | -8.615850e-47 |
| Msa0029520 | Msa1386910 | 0.802570 | 5.269275e-49 | -8.615850e-47 |
| Msa0029520 | Msa1387450 | 0.812560 | 3.986915e-51 | -8.615850e-47 |
| Msa0029520 | Msa1388030 | 0.841553 | 4.432216e-58 | -8.615850e-47 |
| Msa0029520 | Msa1388720 | 0.808568 | 2.905111e-50 | -8.615850e-47 |
| Msa0029520 | Msa1391130 | 0.813226 | 2.848840e-51 | -8.615850e-47 |
| Msa0029520 | Msa1391140 | 0.814199 | 1.740181e-51 | -8.615850e-47 |
| Msa0029520 | Msa1391260 | 0.805927 | 1.054100e-49 | -8.615850e-47 |
| Msa0029520 | Msa1407160 | 0.805038 | 1.618683e-49 | -8.615850e-47 |
| Msa0029520 | Msa1408230 | 0.807600 | 4.669127e-50 | -8.615850e-47 |
| Msa0029520 | Msa1410480 | 0.815010 | 1.150934e-51 | -8.615850e-47 |
| Msa0029520 | Msa1410500 | 0.801148 | 1.032222e-48 | -8.615850e-47 |
| Msa0029520 | Msa1411930 | 0.800209 | 1.604849e-48 | -8.615850e-47 |
| Msa0029520 | Msa1414780 | 0.808733 | 2.679455e-50 | -8.615850e-47 |
| Msa0029520 | Msa1415510 | 0.806938 | 6.450908e-50 | -8.615850e-47 |
| Msa0029520 | Msa1423560 | 0.803510 | 3.368987e-49 | -8.615850e-47 |
| Msa0029520 | Msa1424490 | 0.802672 | 5.020104e-49 | -8.615850e-47 |
| Msa0029520 | Msa1428230 | 0.800293 | 1.542633e-48 | -8.615850e-47 |
| Msa0029520 | Msa1431510 | 0.806769 | 7.003194e-50 | -8.615850e-47 |
| Msa0029520 | Msa1440140 | 0.833275 | 5.854699e-56 | -8.615850e-47 |
| Msa0029520 | Msa1444130 | 0.818638 | 1.765600e-52 | -8.615850e-47 |
| Msa0029520 | Msa1444690 | 0.807903 | 4.027242e-50 | -8.615850e-47 |
| Msa0029520 | Msa1444770 | 0.846311 | 2.352414e-59 | -8.615850e-47 |
| Msa0029520 | Msa1451200 | 0.809472 | 1.860753e-50 | -8.615850e-47 |
| Msa0029520 | Msa1452230 | 0.800088 | 1.698338e-48 | -8.615850e-47 |
| Msa0029520 | Msa1457390 | 0.808853 | 2.524616e-50 | -8.615850e-47 |
| Msa0029520 | Msa1461840 | 0.805968 | 1.033041e-49 | -8.615850e-47 |
| Msa0029520 | Msa1462680 | 0.807439 | 5.051867e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029520 | MtrunA17_Chr1g0194171 | 89.441 | 161 | 17 | 0 | 7 | 167 | 4 | 164 | 3.20e-99 | 283 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029520 | AT4G01883.3 | 59.223 | 103 | 35 | 2 | 59 | 157 | 60 | 159 | 1.07e-39 | 133 |
| Msa0029520 | AT4G01883.2 | 59.223 | 103 | 35 | 2 | 59 | 157 | 60 | 159 | 1.13e-39 | 134 |
| Msa0029520 | AT4G01883.1 | 63.736 | 91 | 30 | 1 | 59 | 149 | 60 | 147 | 1.23e-39 | 134 |
| Msa0029520 | AT1G02475.1 | 69.880 | 83 | 25 | 0 | 67 | 149 | 63 | 145 | 1.44e-39 | 134 |
| Msa0029520 | AT1G02470.2 | 57.692 | 78 | 33 | 0 | 72 | 149 | 69 | 146 | 5.50e-29 | 106 |
| Msa0029520 | AT1G02470.1 | 57.692 | 78 | 33 | 0 | 72 | 149 | 69 | 146 | 7.19e-29 | 106 |
Find 38 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTTAACAGTGGAAATAA+AGG | 0.283136 | 1_1:+54820812 | None:intergenic |
| CGAAAAGAAGCAAAAGTATC+AGG | 0.296065 | 1_1:+54820247 | None:intergenic |
| GAAATAAAGGGCATCCATTC+CGG | 0.313746 | 1_1:+54820825 | None:intergenic |
| GCCCTTTATTTCCACTGTTA+AGG | 0.341799 | 1_1:-54820814 | Msa0029520:intron |
| GTCAGAATATTGAGTTCTCT+TGG | 0.369456 | 1_1:-54820302 | Msa0029520:CDS |
| GAAGCTTCTAGAAGTAAAAT+TGG | 0.382494 | 1_1:+54821857 | None:intergenic |
| TTCCCCTGTCATGGAGTGGC+AGG | 0.393458 | 1_1:-54821739 | Msa0029520:CDS |
| TGCGACAGGTCAGGTTTGTC+TGG | 0.396361 | 1_1:+54820351 | None:intergenic |
| AAATAAAGGGCATCCATTCC+GGG | 0.416616 | 1_1:+54820826 | None:intergenic |
| TCCTTGAAGTATAAGGCATT+TGG | 0.430828 | 1_1:-54820324 | Msa0029520:CDS |
| ACCAAATGCCTTATACTTCA+AGG | 0.433774 | 1_1:+54820323 | None:intergenic |
| TTCCGAATGCAGGGTTAAGA+TGG | 0.435808 | 1_1:-54820904 | Msa0029520:intron |
| AAGGACCATTGCGACAGGTC+AGG | 0.449994 | 1_1:+54820342 | None:intergenic |
| GCAATGGTCCTTGAAGTATA+AGG | 0.452028 | 1_1:-54820331 | Msa0029520:CDS |
| TTGGAAGAGAGTGAAGTTGA+GGG | 0.452562 | 1_1:+54821834 | None:intergenic |
| CAATCCTGCCACTCCATGAC+AGG | 0.454346 | 1_1:+54821735 | None:intergenic |
| CAATCATATGCTACAGAGAT+CGG | 0.479919 | 1_1:+54820870 | None:intergenic |
| ACCTTAACAGTGGAAATAAA+GGG | 0.493335 | 1_1:+54820813 | None:intergenic |
| ATTGGAAGAGAGTGAAGTTG+AGG | 0.504072 | 1_1:+54821833 | None:intergenic |
| CTAGCATTGCGATTCAAAGA+TGG | 0.510418 | 1_1:+54821894 | None:intergenic |
| TTCTGATCGTGAAGCCATCC+CGG | 0.524092 | 1_1:-54820844 | Msa0029520:CDS |
| AATCATATGCTACAGAGATC+GGG | 0.541146 | 1_1:+54820871 | None:intergenic |
| TTGGCTTGCTCGTAATATGC+AGG | 0.548555 | 1_1:-54820283 | Msa0029520:CDS |
| CTTGAATCGATGGAAAATTG+AGG | 0.550970 | 1_1:+54821767 | None:intergenic |
| CGAATGCAGGGTTAAGATGG+AGG | 0.555585 | 1_1:-54820901 | Msa0029520:intron |
| ATCGTGAAGCCATCCCGGAA+TGG | 0.574790 | 1_1:-54820839 | Msa0029520:CDS |
| TGGAAGAGAGTGAAGTTGAG+GGG | 0.576892 | 1_1:+54821835 | None:intergenic |
| GAGTCTGAAGAAGAAGCGAT+TGG | 0.577061 | 1_1:+54821815 | None:intergenic |
| ACTTCAAGGACCATTGCGAC+AGG | 0.589808 | 1_1:+54820337 | None:intergenic |
| ACAAACCTGACCTGTCGCAA+TGG | 0.598815 | 1_1:-54820347 | Msa0029520:CDS |
| GCTTCTAGAAGTAAAATTGG+CGG | 0.606768 | 1_1:+54821860 | None:intergenic |
| GCTTAGAAGAAGAAGTGTGA+GGG | 0.616908 | 1_1:+54821793 | None:intergenic |
| AAGAAGCAAAAGTATCAGGT+AGG | 0.620203 | 1_1:+54820251 | None:intergenic |
| AATCCTGCCACTCCATGACA+GGG | 0.620352 | 1_1:+54821736 | None:intergenic |
| CGCTTAGAAGAAGAAGTGTG+AGG | 0.627236 | 1_1:+54821792 | None:intergenic |
| AAAGGGCATCCATTCCGGGA+TGG | 0.645388 | 1_1:+54820830 | None:intergenic |
| GAGCAAGCACACCTTAACAG+TGG | 0.691318 | 1_1:+54820803 | None:intergenic |
| ATCCTGCCACTCCATGACAG+GGG | 0.702823 | 1_1:+54821737 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAATAAGCAAAAT+CGG | + | chr1_1:54820655-54820674 | None:intergenic | 15.0% |
| !! | AATGTTGTATATTTCTTAAT+TGG | - | chr1_1:54821180-54821199 | Msa0029520:intron | 15.0% |
| !!! | TTATTTTTTTCATTGAAAGT+AGG | + | chr1_1:54821260-54821279 | None:intergenic | 15.0% |
| !! | AAAGAAAAAATAAGCAAAAT+CGG | + | chr1_1:54820655-54820674 | None:intergenic | 15.0% |
| !! | AATGTTGTATATTTCTTAAT+TGG | - | chr1_1:54821180-54821199 | Msa0029520:intron | 15.0% |
| !!! | TTATTTTTTTCATTGAAAGT+AGG | + | chr1_1:54821260-54821279 | None:intergenic | 15.0% |
| !!! | GCTTTTCTATTTTATATGTA+TGG | - | chr1_1:54820503-54820522 | Msa0029520:intron | 20.0% |
| !! | CTCAAATTATTATAAACCAA+TGG | + | chr1_1:54820812-54820831 | None:intergenic | 20.0% |
| !!! | CATTGGTTTATAATAATTTG+AGG | - | chr1_1:54820810-54820829 | Msa0029520:intron | 20.0% |
| !! | TATTAGAGGAATATGAAATA+AGG | + | chr1_1:54821077-54821096 | None:intergenic | 20.0% |
| !! | TTATTTCATATTCCTCTAAT+AGG | - | chr1_1:54821076-54821095 | Msa0029520:intron | 20.0% |
| !! | TATTTCATATTCCTCTAATA+GGG | - | chr1_1:54821077-54821096 | Msa0029520:intron | 20.0% |
| !! | AATATCATAATCACTATTGT+TGG | - | chr1_1:54821436-54821455 | Msa0029520:intron | 20.0% |
| !! | AATTGAAAATCTTTACCTTA+TGG | - | chr1_1:54821471-54821490 | Msa0029520:intron | 20.0% |
| !!! | GCTTTTCTATTTTATATGTA+TGG | - | chr1_1:54820503-54820522 | Msa0029520:intron | 20.0% |
| !! | CTCAAATTATTATAAACCAA+TGG | + | chr1_1:54820812-54820831 | None:intergenic | 20.0% |
| !!! | CATTGGTTTATAATAATTTG+AGG | - | chr1_1:54820810-54820829 | Msa0029520:intron | 20.0% |
| !! | TATTAGAGGAATATGAAATA+AGG | + | chr1_1:54821077-54821096 | None:intergenic | 20.0% |
| !! | TTATTTCATATTCCTCTAAT+AGG | - | chr1_1:54821076-54821095 | Msa0029520:intron | 20.0% |
| !! | TATTTCATATTCCTCTAATA+GGG | - | chr1_1:54821077-54821096 | Msa0029520:intron | 20.0% |
| !! | AATATCATAATCACTATTGT+TGG | - | chr1_1:54821436-54821455 | Msa0029520:intron | 20.0% |
| !! | AATTGAAAATCTTTACCTTA+TGG | - | chr1_1:54821471-54821490 | Msa0029520:intron | 20.0% |
| ! | TAGAAAAGCGAAAGAAAAAA+AGG | + | chr1_1:54820492-54820511 | None:intergenic | 25.0% |
| ! | TTCTTTGTAATATATGCACA+AGG | - | chr1_1:54820685-54820704 | Msa0029520:intron | 25.0% |
| ! | TATTATAAACCAATGGAAAG+AGG | + | chr1_1:54820805-54820824 | None:intergenic | 25.0% |
| !! | ACTGTTTTCATAATCTATCT+TGG | + | chr1_1:54820928-54820947 | None:intergenic | 25.0% |
| !! | TTAAGTTGCTTATCCAAATA+TGG | - | chr1_1:54821051-54821070 | Msa0029520:intron | 25.0% |
| ! | ATATGAAATAAGGCCATATT+TGG | + | chr1_1:54821067-54821086 | None:intergenic | 25.0% |
| ! | AAAATAATATTTCCGAATGC+AGG | - | chr1_1:54821273-54821292 | Msa0029520:intron | 25.0% |
| ! | AAATAATATTTCCGAATGCA+GGG | - | chr1_1:54821274-54821293 | Msa0029520:intron | 25.0% |
| !!! | ATTAGCCTTGTAATTAATCA+GGG | + | chr1_1:54821419-54821438 | None:intergenic | 25.0% |
| !!! | TATTAGCCTTGTAATTAATC+AGG | + | chr1_1:54821420-54821439 | None:intergenic | 25.0% |
| !!! | TTTGATTTTATGCAAAACGT+TGG | - | chr1_1:54821794-54821813 | Msa0029520:CDS | 25.0% |
| ! | TAGAAAAGCGAAAGAAAAAA+AGG | + | chr1_1:54820492-54820511 | None:intergenic | 25.0% |
| ! | TTCTTTGTAATATATGCACA+AGG | - | chr1_1:54820685-54820704 | Msa0029520:intron | 25.0% |
| ! | TATTATAAACCAATGGAAAG+AGG | + | chr1_1:54820805-54820824 | None:intergenic | 25.0% |
| !! | ACTGTTTTCATAATCTATCT+TGG | + | chr1_1:54820928-54820947 | None:intergenic | 25.0% |
| !! | TTAAGTTGCTTATCCAAATA+TGG | - | chr1_1:54821051-54821070 | Msa0029520:intron | 25.0% |
| ! | ATATGAAATAAGGCCATATT+TGG | + | chr1_1:54821067-54821086 | None:intergenic | 25.0% |
| ! | AAAATAATATTTCCGAATGC+AGG | - | chr1_1:54821273-54821292 | Msa0029520:intron | 25.0% |
| ! | AAATAATATTTCCGAATGCA+GGG | - | chr1_1:54821274-54821293 | Msa0029520:intron | 25.0% |
| !!! | ATTAGCCTTGTAATTAATCA+GGG | + | chr1_1:54821419-54821438 | None:intergenic | 25.0% |
| !!! | TATTAGCCTTGTAATTAATC+AGG | + | chr1_1:54821420-54821439 | None:intergenic | 25.0% |
| !!! | TTTGATTTTATGCAAAACGT+TGG | - | chr1_1:54821794-54821813 | Msa0029520:CDS | 25.0% |
| ! | GAAGCTTCTAGAAGTAAAAT+TGG | + | chr1_1:54820333-54820352 | None:intergenic | 30.0% |
| GAATATCTATGCTAATTGCA+AGG | + | chr1_1:54820779-54820798 | None:intergenic | 30.0% | |
| TATGGAAATAAGGTGAAAAC+AGG | + | chr1_1:54820899-54820918 | None:intergenic | 30.0% | |
| !! | GTTTTCACCTTATTTCCATA+AGG | - | chr1_1:54820899-54820918 | Msa0029520:intron | 30.0% |
| AAAAATTCCATCCCTATTAG+AGG | + | chr1_1:54821091-54821110 | None:intergenic | 30.0% | |
| CTAAAACGAATGGAACAAAA+TGG | + | chr1_1:54821128-54821147 | None:intergenic | 30.0% | |
| !! | TCGTCTAATTCTAAAACGAA+TGG | + | chr1_1:54821138-54821157 | None:intergenic | 30.0% |
| ACCTTAACAGTGGAAATAAA+GGG | + | chr1_1:54821377-54821396 | None:intergenic | 30.0% | |
| TGTAATTAATCAGGGTTAGA+AGG | + | chr1_1:54821411-54821430 | None:intergenic | 30.0% | |
| TCTAACCCTGATTAATTACA+AGG | - | chr1_1:54821411-54821430 | Msa0029520:intron | 30.0% | |
| ! | TAGATTAAACTGTGTTGATG+AGG | - | chr1_1:54821540-54821559 | Msa0029520:intron | 30.0% |
| ! | GAAGCTTCTAGAAGTAAAAT+TGG | + | chr1_1:54820333-54820352 | None:intergenic | 30.0% |
| GAATATCTATGCTAATTGCA+AGG | + | chr1_1:54820779-54820798 | None:intergenic | 30.0% | |
| TATGGAAATAAGGTGAAAAC+AGG | + | chr1_1:54820899-54820918 | None:intergenic | 30.0% | |
| !! | GTTTTCACCTTATTTCCATA+AGG | - | chr1_1:54820899-54820918 | Msa0029520:intron | 30.0% |
| AAAAATTCCATCCCTATTAG+AGG | + | chr1_1:54821091-54821110 | None:intergenic | 30.0% | |
| CTAAAACGAATGGAACAAAA+TGG | + | chr1_1:54821128-54821147 | None:intergenic | 30.0% | |
| !! | TCGTCTAATTCTAAAACGAA+TGG | + | chr1_1:54821138-54821157 | None:intergenic | 30.0% |
| ACCTTAACAGTGGAAATAAA+GGG | + | chr1_1:54821377-54821396 | None:intergenic | 30.0% | |
| TGTAATTAATCAGGGTTAGA+AGG | + | chr1_1:54821411-54821430 | None:intergenic | 30.0% | |
| TCTAACCCTGATTAATTACA+AGG | - | chr1_1:54821411-54821430 | Msa0029520:intron | 30.0% | |
| ! | TAGATTAAACTGTGTTGATG+AGG | - | chr1_1:54821540-54821559 | Msa0029520:intron | 30.0% |
| TGAAAAAGAGCTTATGACGA+CGG | + | chr1_1:54820267-54820286 | None:intergenic | 35.0% | |
| ! | GCTTCTAGAAGTAAAATTGG+CGG | + | chr1_1:54820330-54820349 | None:intergenic | 35.0% |
| CTTGAATCGATGGAAAATTG+AGG | + | chr1_1:54820423-54820442 | None:intergenic | 35.0% | |
| AGTTATCATCACAAGTGCTT+TGG | + | chr1_1:54820847-54820866 | None:intergenic | 35.0% | |
| TTGGAGACCTTATGGAAATA+AGG | + | chr1_1:54820909-54820928 | None:intergenic | 35.0% | |
| AATCTATCTTGGAGACCTTA+TGG | + | chr1_1:54820917-54820936 | None:intergenic | 35.0% | |
| TCATATTCCTCTAATAGGGA+TGG | - | chr1_1:54821081-54821100 | Msa0029520:intron | 35.0% | |
| !!! | CAGTTTTTAGCACTTCTGTT+TGG | - | chr1_1:54821206-54821225 | Msa0029520:intron | 35.0% |
| AATCATATGCTACAGAGATC+GGG | + | chr1_1:54821319-54821338 | None:intergenic | 35.0% | |
| CAATCATATGCTACAGAGAT+CGG | + | chr1_1:54821320-54821339 | None:intergenic | 35.0% | |
| CACCTTAACAGTGGAAATAA+AGG | + | chr1_1:54821378-54821397 | None:intergenic | 35.0% | |
| TCACATGCTATGATTCCATA+AGG | + | chr1_1:54821489-54821508 | None:intergenic | 35.0% | |
| ACAGTTTAATCTAGTCTGAC+AGG | + | chr1_1:54821533-54821552 | None:intergenic | 35.0% | |
| ! | TCCTTGAAGTATAAGGCATT+TGG | - | chr1_1:54821863-54821882 | Msa0029520:CDS | 35.0% |
| ACCAAATGCCTTATACTTCA+AGG | + | chr1_1:54821867-54821886 | None:intergenic | 35.0% | |
| GTCAGAATATTGAGTTCTCT+TGG | - | chr1_1:54821885-54821904 | Msa0029520:CDS | 35.0% | |
| !! | AAGAAGCAAAAGTATCAGGT+AGG | + | chr1_1:54821939-54821958 | None:intergenic | 35.0% |
| !! | CGAAAAGAAGCAAAAGTATC+AGG | + | chr1_1:54821943-54821962 | None:intergenic | 35.0% |
| TGAAAAAGAGCTTATGACGA+CGG | + | chr1_1:54820267-54820286 | None:intergenic | 35.0% | |
| ! | GCTTCTAGAAGTAAAATTGG+CGG | + | chr1_1:54820330-54820349 | None:intergenic | 35.0% |
| CTTGAATCGATGGAAAATTG+AGG | + | chr1_1:54820423-54820442 | None:intergenic | 35.0% | |
| AGTTATCATCACAAGTGCTT+TGG | + | chr1_1:54820847-54820866 | None:intergenic | 35.0% | |
| TTGGAGACCTTATGGAAATA+AGG | + | chr1_1:54820909-54820928 | None:intergenic | 35.0% | |
| AATCTATCTTGGAGACCTTA+TGG | + | chr1_1:54820917-54820936 | None:intergenic | 35.0% | |
| TCATATTCCTCTAATAGGGA+TGG | - | chr1_1:54821081-54821100 | Msa0029520:intron | 35.0% | |
| !!! | CAGTTTTTAGCACTTCTGTT+TGG | - | chr1_1:54821206-54821225 | Msa0029520:intron | 35.0% |
| AATCATATGCTACAGAGATC+GGG | + | chr1_1:54821319-54821338 | None:intergenic | 35.0% | |
| CAATCATATGCTACAGAGAT+CGG | + | chr1_1:54821320-54821339 | None:intergenic | 35.0% | |
| CACCTTAACAGTGGAAATAA+AGG | + | chr1_1:54821378-54821397 | None:intergenic | 35.0% | |
| TCACATGCTATGATTCCATA+AGG | + | chr1_1:54821489-54821508 | None:intergenic | 35.0% | |
| ACAGTTTAATCTAGTCTGAC+AGG | + | chr1_1:54821533-54821552 | None:intergenic | 35.0% | |
| ! | TCCTTGAAGTATAAGGCATT+TGG | - | chr1_1:54821863-54821882 | Msa0029520:CDS | 35.0% |
| ACCAAATGCCTTATACTTCA+AGG | + | chr1_1:54821867-54821886 | None:intergenic | 35.0% | |
| GTCAGAATATTGAGTTCTCT+TGG | - | chr1_1:54821885-54821904 | Msa0029520:CDS | 35.0% | |
| !! | AAGAAGCAAAAGTATCAGGT+AGG | + | chr1_1:54821939-54821958 | None:intergenic | 35.0% |
| !! | CGAAAAGAAGCAAAAGTATC+AGG | + | chr1_1:54821943-54821962 | None:intergenic | 35.0% |
| CTAGCATTGCGATTCAAAGA+TGG | + | chr1_1:54820296-54820315 | None:intergenic | 40.0% | |
| TTGGAAGAGAGTGAAGTTGA+GGG | + | chr1_1:54820356-54820375 | None:intergenic | 40.0% | |
| ATTGGAAGAGAGTGAAGTTG+AGG | + | chr1_1:54820357-54820376 | None:intergenic | 40.0% | |
| ! | GCTTAGAAGAAGAAGTGTGA+GGG | + | chr1_1:54820397-54820416 | None:intergenic | 40.0% |
| ATATTCGTGCCTCTTTCCAT+TGG | - | chr1_1:54820793-54820812 | Msa0029520:intron | 40.0% | |
| TCATTGAAAGTAGGAAGCTG+TGG | + | chr1_1:54821251-54821270 | None:intergenic | 40.0% | |
| !! | AAATAAAGGGCATCCATTCC+GGG | + | chr1_1:54821364-54821383 | None:intergenic | 40.0% |
| !! | GAAATAAAGGGCATCCATTC+CGG | + | chr1_1:54821365-54821384 | None:intergenic | 40.0% |
| ! | GCCCTTTATTTCCACTGTTA+AGG | - | chr1_1:54821373-54821392 | Msa0029520:intron | 40.0% |
| TCTGACAGGAAAAGAGTCAA+AGG | + | chr1_1:54821519-54821538 | None:intergenic | 40.0% | |
| GTCTGGCAATATCTGCAAAA+TGG | + | chr1_1:54821822-54821841 | None:intergenic | 40.0% | |
| GCAATGGTCCTTGAAGTATA+AGG | - | chr1_1:54821856-54821875 | Msa0029520:CDS | 40.0% | |
| CTAGCATTGCGATTCAAAGA+TGG | + | chr1_1:54820296-54820315 | None:intergenic | 40.0% | |
| TTGGAAGAGAGTGAAGTTGA+GGG | + | chr1_1:54820356-54820375 | None:intergenic | 40.0% | |
| ATTGGAAGAGAGTGAAGTTG+AGG | + | chr1_1:54820357-54820376 | None:intergenic | 40.0% | |
| ! | GCTTAGAAGAAGAAGTGTGA+GGG | + | chr1_1:54820397-54820416 | None:intergenic | 40.0% |
| ATATTCGTGCCTCTTTCCAT+TGG | - | chr1_1:54820793-54820812 | Msa0029520:intron | 40.0% | |
| TCATTGAAAGTAGGAAGCTG+TGG | + | chr1_1:54821251-54821270 | None:intergenic | 40.0% | |
| !! | AAATAAAGGGCATCCATTCC+GGG | + | chr1_1:54821364-54821383 | None:intergenic | 40.0% |
| !! | GAAATAAAGGGCATCCATTC+CGG | + | chr1_1:54821365-54821384 | None:intergenic | 40.0% |
| ! | GCCCTTTATTTCCACTGTTA+AGG | - | chr1_1:54821373-54821392 | Msa0029520:intron | 40.0% |
| TCTGACAGGAAAAGAGTCAA+AGG | + | chr1_1:54821519-54821538 | None:intergenic | 40.0% | |
| GTCTGGCAATATCTGCAAAA+TGG | + | chr1_1:54821822-54821841 | None:intergenic | 40.0% | |
| GCAATGGTCCTTGAAGTATA+AGG | - | chr1_1:54821856-54821875 | Msa0029520:CDS | 40.0% | |
| TGGAAGAGAGTGAAGTTGAG+GGG | + | chr1_1:54820355-54820374 | None:intergenic | 45.0% | |
| GAGTCTGAAGAAGAAGCGAT+TGG | + | chr1_1:54820375-54820394 | None:intergenic | 45.0% | |
| ! | CGCTTAGAAGAAGAAGTGTG+AGG | + | chr1_1:54820398-54820417 | None:intergenic | 45.0% |
| GGGAAAAACGCTTGAATCGA+TGG | + | chr1_1:54820433-54820452 | None:intergenic | 45.0% | |
| ATCACAAGTGCTTTGGTGAG+TGG | + | chr1_1:54820840-54820859 | None:intergenic | 45.0% | |
| GAAAGTAGGAAGCTGTGGTT+GGG | + | chr1_1:54821246-54821265 | None:intergenic | 45.0% | |
| TGAAAGTAGGAAGCTGTGGT+TGG | + | chr1_1:54821247-54821266 | None:intergenic | 45.0% | |
| TTCCGAATGCAGGGTTAAGA+TGG | - | chr1_1:54821283-54821302 | Msa0029520:intron | 45.0% | |
| CTCCATCTTAACCCTGCATT+CGG | + | chr1_1:54821288-54821307 | None:intergenic | 45.0% | |
| !! | TTGGCTTGCTCGTAATATGC+AGG | - | chr1_1:54821904-54821923 | Msa0029520:CDS | 45.0% |
| TGGAAGAGAGTGAAGTTGAG+GGG | + | chr1_1:54820355-54820374 | None:intergenic | 45.0% | |
| GAGTCTGAAGAAGAAGCGAT+TGG | + | chr1_1:54820375-54820394 | None:intergenic | 45.0% | |
| ! | CGCTTAGAAGAAGAAGTGTG+AGG | + | chr1_1:54820398-54820417 | None:intergenic | 45.0% |
| GGGAAAAACGCTTGAATCGA+TGG | + | chr1_1:54820433-54820452 | None:intergenic | 45.0% | |
| ATCACAAGTGCTTTGGTGAG+TGG | + | chr1_1:54820840-54820859 | None:intergenic | 45.0% | |
| GAAAGTAGGAAGCTGTGGTT+GGG | + | chr1_1:54821246-54821265 | None:intergenic | 45.0% | |
| TGAAAGTAGGAAGCTGTGGT+TGG | + | chr1_1:54821247-54821266 | None:intergenic | 45.0% | |
| TTCCGAATGCAGGGTTAAGA+TGG | - | chr1_1:54821283-54821302 | Msa0029520:intron | 45.0% | |
| CTCCATCTTAACCCTGCATT+CGG | + | chr1_1:54821288-54821307 | None:intergenic | 45.0% | |
| !! | TTGGCTTGCTCGTAATATGC+AGG | - | chr1_1:54821904-54821923 | Msa0029520:CDS | 45.0% |
| ! | CAAGCGTTTTTCCCCTGTCA+TGG | - | chr1_1:54820439-54820458 | Msa0029520:intron | 50.0% |
| ! | GTTTTTCCCCTGTCATGGAG+TGG | - | chr1_1:54820444-54820463 | Msa0029520:intron | 50.0% |
| AATCCTGCCACTCCATGACA+GGG | + | chr1_1:54820454-54820473 | None:intergenic | 50.0% | |
| CGAATGCAGGGTTAAGATGG+AGG | - | chr1_1:54821286-54821305 | Msa0029520:intron | 50.0% | |
| TTCTGATCGTGAAGCCATCC+CGG | - | chr1_1:54821343-54821362 | Msa0029520:intron | 50.0% | |
| GAGCAAGCACACCTTAACAG+TGG | + | chr1_1:54821387-54821406 | None:intergenic | 50.0% | |
| ACAAACCTGACCTGTCGCAA+TGG | - | chr1_1:54821840-54821859 | Msa0029520:CDS | 50.0% | |
| ACTTCAAGGACCATTGCGAC+AGG | + | chr1_1:54821853-54821872 | None:intergenic | 50.0% | |
| ! | CAAGCGTTTTTCCCCTGTCA+TGG | - | chr1_1:54820439-54820458 | Msa0029520:intron | 50.0% |
| ! | GTTTTTCCCCTGTCATGGAG+TGG | - | chr1_1:54820444-54820463 | Msa0029520:intron | 50.0% |
| AATCCTGCCACTCCATGACA+GGG | + | chr1_1:54820454-54820473 | None:intergenic | 50.0% | |
| CGAATGCAGGGTTAAGATGG+AGG | - | chr1_1:54821286-54821305 | Msa0029520:intron | 50.0% | |
| TTCTGATCGTGAAGCCATCC+CGG | - | chr1_1:54821343-54821362 | Msa0029520:intron | 50.0% | |
| GAGCAAGCACACCTTAACAG+TGG | + | chr1_1:54821387-54821406 | None:intergenic | 50.0% | |
| ACAAACCTGACCTGTCGCAA+TGG | - | chr1_1:54821840-54821859 | Msa0029520:CDS | 50.0% | |
| ACTTCAAGGACCATTGCGAC+AGG | + | chr1_1:54821853-54821872 | None:intergenic | 50.0% | |
| ATCCTGCCACTCCATGACAG+GGG | + | chr1_1:54820453-54820472 | None:intergenic | 55.0% | |
| CAATCCTGCCACTCCATGAC+AGG | + | chr1_1:54820455-54820474 | None:intergenic | 55.0% | |
| ATCGTGAAGCCATCCCGGAA+TGG | - | chr1_1:54821348-54821367 | Msa0029520:intron | 55.0% | |
| !! | AAAGGGCATCCATTCCGGGA+TGG | + | chr1_1:54821360-54821379 | None:intergenic | 55.0% |
| TGCGACAGGTCAGGTTTGTC+TGG | + | chr1_1:54821839-54821858 | None:intergenic | 55.0% | |
| AAGGACCATTGCGACAGGTC+AGG | + | chr1_1:54821848-54821867 | None:intergenic | 55.0% | |
| ATCCTGCCACTCCATGACAG+GGG | + | chr1_1:54820453-54820472 | None:intergenic | 55.0% | |
| CAATCCTGCCACTCCATGAC+AGG | + | chr1_1:54820455-54820474 | None:intergenic | 55.0% | |
| ATCGTGAAGCCATCCCGGAA+TGG | - | chr1_1:54821348-54821367 | Msa0029520:intron | 55.0% | |
| !! | AAAGGGCATCCATTCCGGGA+TGG | + | chr1_1:54821360-54821379 | None:intergenic | 55.0% |
| TGCGACAGGTCAGGTTTGTC+TGG | + | chr1_1:54821839-54821858 | None:intergenic | 55.0% | |
| AAGGACCATTGCGACAGGTC+AGG | + | chr1_1:54821848-54821867 | None:intergenic | 55.0% | |
| TTCCCCTGTCATGGAGTGGC+AGG | - | chr1_1:54820448-54820467 | Msa0029520:intron | 60.0% | |
| TTCCCCTGTCATGGAGTGGC+AGG | - | chr1_1:54820448-54820467 | Msa0029520:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 54820227 | 54821982 | 54820227 | ID=Msa0029520;Name=Msa0029520 |
| chr1_1 | mRNA | 54820227 | 54821982 | 54820227 | ID=Msa0029520-mRNA-1;Parent=Msa0029520;Name=Msa0029520-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|3|0|167 |
| chr1_1 | exon | 54821732 | 54821982 | 54821732 | ID=Msa0029520-mRNA-1:exon:16403;Parent=Msa0029520-mRNA-1 |
| chr1_1 | exon | 54820815 | 54820914 | 54820815 | ID=Msa0029520-mRNA-1:exon:16402;Parent=Msa0029520-mRNA-1 |
| chr1_1 | exon | 54820227 | 54820379 | 54820227 | ID=Msa0029520-mRNA-1:exon:16401;Parent=Msa0029520-mRNA-1 |
| chr1_1 | CDS | 54821732 | 54821982 | 54821732 | ID=Msa0029520-mRNA-1:cds;Parent=Msa0029520-mRNA-1 |
| chr1_1 | CDS | 54820815 | 54820914 | 54820815 | ID=Msa0029520-mRNA-1:cds;Parent=Msa0029520-mRNA-1 |
| chr1_1 | CDS | 54820227 | 54820379 | 54820227 | ID=Msa0029520-mRNA-1:cds;Parent=Msa0029520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
