Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959790 | XP_024641995.1 | 93.400 | 803 | 47 | 4 | 1 | 801 | 5 | 803 | 0.0 | 1473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959790 | sp|Q8IWB9|TEX2_HUMAN | 22.468 | 316 | 212 | 5 | 350 | 646 | 825 | 1126 | 5.17e-19 | 96.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959790 | A0A396HHW7 | 93.400 | 803 | 47 | 4 | 1 | 801 | 5 | 803 | 0.0 | 1473 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040190 | Msa0959790 | 0.801567 | 8.470712e-49 | -8.615850e-47 |
| Msa0083200 | Msa0959790 | 0.810308 | 1.229481e-50 | -8.615850e-47 |
| Msa0096230 | Msa0959790 | 0.808093 | 3.668900e-50 | -8.615850e-47 |
| Msa0116950 | Msa0959790 | 0.811916 | 5.509171e-51 | -8.615850e-47 |
| Msa0687320 | Msa0959790 | 0.824880 | 6.350471e-54 | -8.615850e-47 |
| Msa0690920 | Msa0959790 | 0.804999 | 1.649302e-49 | -8.615850e-47 |
| Msa0778580 | Msa0959790 | 0.805398 | 1.360760e-49 | -8.615850e-47 |
| Msa0815950 | Msa0959790 | 0.836725 | 7.909048e-57 | -8.615850e-47 |
| Msa0833910 | Msa0959790 | 0.824497 | 7.815603e-54 | -8.615850e-47 |
| Msa0834160 | Msa0959790 | 0.840483 | 8.465222e-58 | -8.615850e-47 |
| Msa0129270 | Msa0959790 | -0.809129 | 2.203704e-50 | -8.615850e-47 |
| Msa0133880 | Msa0959790 | 0.800573 | 1.352702e-48 | -8.615850e-47 |
| Msa0134550 | Msa0959790 | 0.802472 | 5.519519e-49 | -8.615850e-47 |
| Msa0175480 | Msa0959790 | 0.820852 | 5.509115e-53 | -8.615850e-47 |
| Msa0184120 | Msa0959790 | 0.803742 | 3.014379e-49 | -8.615850e-47 |
| Msa0206600 | Msa0959790 | 0.804891 | 1.737916e-49 | -8.615850e-47 |
| Msa0207990 | Msa0959790 | 0.819418 | 1.173776e-52 | -8.615850e-47 |
| Msa0216560 | Msa0959790 | 0.812923 | 3.320354e-51 | -8.615850e-47 |
| Msa0222720 | Msa0959790 | 0.803100 | 4.095256e-49 | -8.615850e-47 |
| Msa0370350 | Msa0959790 | 0.821976 | 3.032204e-53 | -8.615850e-47 |
| Msa0377690 | Msa0959790 | 0.804023 | 2.635420e-49 | -8.615850e-47 |
| Msa0423110 | Msa0959790 | 0.803520 | 3.352694e-49 | -8.615850e-47 |
| Msa0428310 | Msa0959790 | 0.812402 | 4.316435e-51 | -8.615850e-47 |
| Msa0256170 | Msa0959790 | 0.806117 | 9.613358e-50 | -8.615850e-47 |
| Msa0295840 | Msa0959790 | 0.814608 | 1.412851e-51 | -8.615850e-47 |
| Msa0549330 | Msa0959790 | 0.805151 | 1.533122e-49 | -8.615850e-47 |
| Msa0883690 | Msa0959790 | 0.824984 | 6.000805e-54 | -8.615850e-47 |
| Msa0894580 | Msa0959790 | 0.876182 | 1.711720e-68 | -8.615850e-47 |
| Msa0895860 | Msa0959790 | 0.842659 | 2.259173e-58 | -8.615850e-47 |
| Msa0959790 | Msa0995090 | 0.969972 | 6.485788e-131 | -8.615850e-47 |
| Msa0959790 | Msa1138730 | 0.834546 | 2.815681e-56 | -8.615850e-47 |
| Msa0959790 | Msa1186010 | 0.820598 | 6.303117e-53 | -8.615850e-47 |
| Msa0959790 | Msa1188380 | 0.830118 | 3.516500e-55 | -8.615850e-47 |
| Msa0959790 | Msa1199690 | 0.807614 | 4.638784e-50 | -8.615850e-47 |
| Msa0959790 | Msa1215660 | 0.806120 | 9.595770e-50 | -8.615850e-47 |
| Msa0959790 | Msa1233760 | 0.802566 | 5.278736e-49 | -8.615850e-47 |
| Msa0959790 | Msa1242990 | 0.835957 | 1.240016e-56 | -8.615850e-47 |
| Msa0959790 | Msa1251960 | 0.813869 | 2.057724e-51 | -8.615850e-47 |
| Msa0959790 | Msa1266720 | 0.821614 | 3.676159e-53 | -8.615850e-47 |
| Msa0959790 | Msa1279240 | 0.817792 | 2.744551e-52 | -8.615850e-47 |
| Msa0959790 | Msa1323920 | 0.845175 | 4.784957e-59 | -8.615850e-47 |
| Msa0959790 | Msa1335500 | -0.802210 | 6.251026e-49 | -8.615850e-47 |
| Msa0959790 | Msa1349490 | 0.803866 | 2.841259e-49 | -8.615850e-47 |
| Msa0959790 | Msa1384980 | 0.808565 | 2.909582e-50 | -8.615850e-47 |
| Msa0959790 | Msa1385940 | 0.806375 | 8.481847e-50 | -8.615850e-47 |
| Msa0959790 | Msa1388070 | 0.817178 | 3.773648e-52 | -8.615850e-47 |
| Msa0959790 | Msa1398310 | 0.803704 | 3.070778e-49 | -8.615850e-47 |
| Msa0959790 | Msa1400600 | 0.809429 | 1.900202e-50 | -8.615850e-47 |
| Msa0959790 | Msa1452200 | 0.804217 | 2.401238e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959790 | MtrunA17_Chr6g0477861 | 93.400 | 803 | 47 | 4 | 1 | 801 | 5 | 803 | 0.0 | 1473 |
| Msa0959790 | MtrunA17_Chr1g0188741 | 57.617 | 814 | 280 | 16 | 7 | 796 | 8 | 780 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959790 | AT1G17820.1 | 43.234 | 835 | 372 | 21 | 6 | 796 | 8 | 784 | 0.0 | 611 |
| Msa0959790 | AT1G73200.1 | 44.554 | 808 | 374 | 23 | 8 | 796 | 9 | 761 | 0.0 | 611 |
Find 188 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCAATTATTGGAATTT+TGG | 0.041133 | 6_3:-77262889 | None:intergenic |
| ATGCCTACGCTTTCACTATT+TGG | 0.123258 | 6_3:-77268449 | None:intergenic |
| ATTGAATTGAATTGAATATT+TGG | 0.168318 | 6_3:-77262642 | None:intergenic |
| GTTTCTTTGTTGATCCTATT+TGG | 0.174421 | 6_3:+77262921 | Msa0959790:CDS |
| AGAACCAAGTCAAAGAATTT+TGG | 0.177615 | 6_3:-77269331 | None:intergenic |
| GCAATTCTCACAAGATTATT+TGG | 0.181435 | 6_3:-77269407 | None:intergenic |
| ATAACCATTTCTTCAATTAT+TGG | 0.189492 | 6_3:-77262897 | None:intergenic |
| TTCCTATCACTTTGGCAATA+AGG | 0.235656 | 6_3:+77267728 | Msa0959790:CDS |
| GTTTCTCCTGTTAGGAAGTA+TGG | 0.286219 | 6_3:+77264189 | Msa0959790:CDS |
| GTTGTTGCTGCGGAATTTCT+TGG | 0.287570 | 6_3:+77262966 | Msa0959790:CDS |
| GAGGTTGACATCGAATATTC+TGG | 0.288180 | 6_3:+77266443 | Msa0959790:CDS |
| TGTTGGCCACTTTCTAATAA+AGG | 0.289373 | 6_3:-77268776 | None:intergenic |
| TGCCTACGCTTTCACTATTT+GGG | 0.314845 | 6_3:-77268448 | None:intergenic |
| TCTTCTGCAGGCAGCAATTC+GGG | 0.315263 | 6_3:+77268412 | Msa0959790:intron |
| GGTTTCTTCAGGGTGTAGTT+TGG | 0.316306 | 6_3:+77264085 | Msa0959790:intron |
| AAATAAAGAGCAACTATATA+TGG | 0.316313 | 6_3:-77269439 | None:intergenic |
| TCCTATCACTTTGGCAATAA+GGG | 0.326907 | 6_3:+77267729 | Msa0959790:CDS |
| CTCTTCTGCAGGCAGCAATT+CGG | 0.329201 | 6_3:+77268411 | Msa0959790:intron |
| CTTTCACTCCACCAGAAGTT+TGG | 0.329291 | 6_3:-77268586 | None:intergenic |
| CTTCAACTTGTTTCTTCAAA+AGG | 0.332239 | 6_3:+77262810 | Msa0959790:five_prime_UTR |
| AATCACTAGTTTCTTGTTGT+TGG | 0.332638 | 6_3:-77268793 | None:intergenic |
| GTTTCTTCAGGGTGTAGTTT+GGG | 0.335417 | 6_3:+77264086 | Msa0959790:intron |
| ATGAAGAATTGTGAAGGAAT+TGG | 0.344182 | 6_3:-77262787 | None:intergenic |
| TTCGACCAGTTCGGCTCAAC+AGG | 0.344859 | 6_3:+77268934 | Msa0959790:CDS |
| ATATGGATCAACCAAGAATC+TGG | 0.349308 | 6_3:+77268527 | Msa0959790:CDS |
| ATATTACCATACTTCCTAAC+AGG | 0.354920 | 6_3:-77264195 | None:intergenic |
| AATTCCAATAATTGAAGAAA+TGG | 0.355848 | 6_3:+77262893 | Msa0959790:exon |
| AAGTTTCATTCCCAGATTCT+TGG | 0.360415 | 6_3:-77268538 | None:intergenic |
| GATAGCAATAACCAAACTTC+TGG | 0.364101 | 6_3:+77268575 | Msa0959790:CDS |
| AATAATTGAAGAAATGGTTA+TGG | 0.364107 | 6_3:+77262899 | Msa0959790:exon |
| TGCTTGAGAATCTGATTTCC+TGG | 0.365550 | 6_3:-77268687 | None:intergenic |
| ATATTCTGGAAGTGCAATAT+TGG | 0.369791 | 6_3:+77266457 | Msa0959790:CDS |
| TTGAATTGAATTGAATATTT+GGG | 0.371897 | 6_3:-77262641 | None:intergenic |
| CAGAGAAAATTTGACACTAA+TGG | 0.373742 | 6_3:-77269502 | None:intergenic |
| CGGAATTTCTTGGTTTCTTG+TGG | 0.374888 | 6_3:+77262976 | Msa0959790:CDS |
| TGATGGAGCATCGTCTGATA+TGG | 0.377589 | 6_3:-77265406 | None:intergenic |
| GAGTATTTAGATAAGCAATT+AGG | 0.382026 | 6_3:+77266581 | Msa0959790:CDS |
| GTTTGGTTATTGCTATCAAT+TGG | 0.383830 | 6_3:-77268569 | None:intergenic |
| TCCAAGTTGAAGTCTATATC+AGG | 0.387688 | 6_3:-77267832 | None:intergenic |
| TTGCTTTGTTCCTGATCAAC+CGG | 0.388432 | 6_3:+77267893 | Msa0959790:CDS |
| GGAATGTTGCACCTTTCATA+TGG | 0.397009 | 6_3:+77268510 | Msa0959790:CDS |
| TCTGACACCGATGAAAAGTT+TGG | 0.400358 | 6_3:+77265483 | Msa0959790:CDS |
| TCATCATCCCTGTCTCGTTC+AGG | 0.402009 | 6_3:+77265435 | Msa0959790:CDS |
| GTACCTTGAGCCGGTTGATC+AGG | 0.405477 | 6_3:-77267903 | None:intergenic |
| ATATAGTTGCTCTTTATTTG+AGG | 0.405578 | 6_3:+77269443 | Msa0959790:three_prime_UTR |
| AACCCTCATCCCAATGATAC+AGG | 0.410476 | 6_3:-77266387 | None:intergenic |
| GAAGGTTTCAAAGTACTTTG+TGG | 0.414855 | 6_3:+77264122 | Msa0959790:CDS |
| AATGTTCCACCCTGTATCAT+TGG | 0.416971 | 6_3:+77266377 | Msa0959790:CDS |
| AAGTACTTTGAAACCTTCTC+TGG | 0.419257 | 6_3:-77264117 | None:intergenic |
| TTCCAGTCACCATCTTCTTT+AGG | 0.420994 | 6_3:-77266635 | None:intergenic |
| ATCCGTGCAAGAGAGAATTC+AGG | 0.424667 | 6_3:+77265587 | Msa0959790:CDS |
| TCAAAAGGTTCCTATCACTT+TGG | 0.424731 | 6_3:+77267720 | Msa0959790:intron |
| ACCCGATCAAAGTGGAAAAC+AGG | 0.425455 | 6_3:+77264941 | Msa0959790:CDS |
| AAAGAAAACTGAGAAACTTC+GGG | 0.426927 | 6_3:+77265314 | Msa0959790:CDS |
| TTCAACTTGTTTCTTCAAAA+GGG | 0.430464 | 6_3:+77262811 | Msa0959790:five_prime_UTR |
| TCTTCTCTTCGCTAGCTTCG+TGG | 0.432629 | 6_3:-77268850 | None:intergenic |
| TGAGAATCTGATTTCCTGGC+TGG | 0.433212 | 6_3:-77268683 | None:intergenic |
| TTTAGCGGTTTGATAATGAA+TGG | 0.435493 | 6_3:-77262536 | None:intergenic |
| ATCATCCTGTTGAGCCGAAC+TGG | 0.437373 | 6_3:-77268939 | None:intergenic |
| GATCATCAAAAGAGGTGAAA+AGG | 0.439984 | 6_3:+77264148 | Msa0959790:CDS |
| CACCCTGTATCATTGGGATG+AGG | 0.441486 | 6_3:+77266384 | Msa0959790:CDS |
| ACAAGAAACTAGTGATTTGA+AGG | 0.442278 | 6_3:+77268799 | Msa0959790:CDS |
| TTTGGCTTCCTGAACGAGAC+AGG | 0.442494 | 6_3:-77265443 | None:intergenic |
| ACCCTTATTGCCAAAGTGAT+AGG | 0.448457 | 6_3:-77267730 | None:intergenic |
| AAGATCTTCCCGAGTTGGCT+TGG | 0.457101 | 6_3:+77265254 | Msa0959790:CDS |
| AAAACGCAGTGTCCCTCTTA+GGG | 0.459266 | 6_3:-77267758 | None:intergenic |
| ATGGTGTAAGGCCCTCCGTT+TGG | 0.460478 | 6_3:+77265032 | Msa0959790:CDS |
| ATCCCGTGTCGAACAATGTT+GGG | 0.460921 | 6_3:+77266528 | Msa0959790:CDS |
| GAAGATGGTGACTGGAACAA+TGG | 0.463083 | 6_3:+77266641 | Msa0959790:CDS |
| TTCAACTTGGAATCATCTGT+TGG | 0.464203 | 6_3:+77267844 | Msa0959790:CDS |
| TCAAAACCTTTATTAGAAAG+TGG | 0.472444 | 6_3:+77268770 | Msa0959790:CDS |
| AGTTCCAAAATTCTTTGACT+TGG | 0.472693 | 6_3:+77269327 | Msa0959790:three_prime_UTR |
| TCGTGGTCACTTTCTAATGA+AGG | 0.474003 | 6_3:-77268833 | None:intergenic |
| CACAGTTGATCGGCGGGTGG+CGG | 0.475158 | 6_3:-77267790 | None:intergenic |
| AAAAGAAAACTGAGAAACTT+CGG | 0.476046 | 6_3:+77265313 | Msa0959790:CDS |
| AGTGGGAGAGGAAGATTTAG+CGG | 0.478546 | 6_3:-77262551 | None:intergenic |
| TAGGGGCTTAGATGATCAAA+TGG | 0.481663 | 6_3:+77269254 | Msa0959790:three_prime_UTR |
| GAACAAAGCAATGCGCGTAT+TGG | 0.482320 | 6_3:-77267881 | None:intergenic |
| ATGTTCCACCCTGTATCATT+GGG | 0.484097 | 6_3:+77266378 | Msa0959790:CDS |
| AATGCACCTTCCTCGACTCC+TGG | 0.486513 | 6_3:+77267254 | Msa0959790:CDS |
| TTGATGAGGGAACATTATGT+TGG | 0.486865 | 6_3:+77265508 | Msa0959790:CDS |
| GTCAATCAGTTCGACCAGTT+CGG | 0.488922 | 6_3:+77268925 | Msa0959790:CDS |
| CTTGTTCTCACTGAGCCTGA+TGG | 0.489817 | 6_3:+77264231 | Msa0959790:CDS |
| CTTGCAACTGCGAATACCAT+TGG | 0.496512 | 6_3:-77265080 | None:intergenic |
| ATAGATTTCCATCTTGATCC+AGG | 0.497314 | 6_3:-77267272 | None:intergenic |
| GGAGAAAGAGGCATGGTGTA+AGG | 0.498578 | 6_3:+77265020 | Msa0959790:CDS |
| ACCCTGTATCATTGGGATGA+GGG | 0.499379 | 6_3:+77266385 | Msa0959790:CDS |
| CATTCATAAAATAAGAATGT+TGG | 0.499766 | 6_3:+77269194 | Msa0959790:three_prime_UTR |
| AAATCTTGAATAATATCTGA+TGG | 0.502351 | 6_3:-77266557 | None:intergenic |
| GAGTTGGCTTGGATAACAAA+TGG | 0.506671 | 6_3:+77265265 | Msa0959790:CDS |
| AGTTGGTGAGCTAGAGAAAG+AGG | 0.506751 | 6_3:+77266499 | Msa0959790:CDS |
| ATGGTTGTATGCGATCCATC+AGG | 0.512009 | 6_3:-77264246 | None:intergenic |
| CGAATAGTGCAGTGATGGAT+AGG | 0.514333 | 6_3:+77268903 | Msa0959790:CDS |
| TGTTGCCAAGCATGTTTCAC+AGG | 0.516906 | 6_3:+77267304 | Msa0959790:CDS |
| TGAGACTTCGTCGGAGAAAG+AGG | 0.517331 | 6_3:+77265008 | Msa0959790:CDS |
| ACGAGAAGATCTTCCCGAGT+TGG | 0.518906 | 6_3:+77265249 | Msa0959790:CDS |
| TCGTCTGATATGGAACTTCT+CGG | 0.519274 | 6_3:-77265396 | None:intergenic |
| TGGGATGAGGGTTCTTCCGA+TGG | 0.522231 | 6_3:+77266397 | Msa0959790:CDS |
| AACAAATGGACTTCATTCTC+AGG | 0.522529 | 6_3:+77265279 | Msa0959790:CDS |
| GAAAAGTTTGGTATTGATGA+GGG | 0.526720 | 6_3:+77265495 | Msa0959790:CDS |
| TGAGGGAATCGATAAAAGAA+TGG | 0.531839 | 6_3:-77262846 | None:intergenic |
| TGGTTATTGCTATCAATTGG+AGG | 0.536308 | 6_3:-77268566 | None:intergenic |
| ATTGTAAGAATGAGTGGGAG+AGG | 0.536371 | 6_3:-77262563 | None:intergenic |
| GTTCCTGATCAACCGGCTCA+AGG | 0.539141 | 6_3:+77267900 | Msa0959790:CDS |
| CGAAGCTAGCGAAGAGAAGA+CGG | 0.539187 | 6_3:+77268853 | Msa0959790:CDS |
| TGTATATCTTGAGACTTCGT+CGG | 0.540811 | 6_3:+77264999 | Msa0959790:CDS |
| AGCCTAAAGAAGATGGTGAC+TGG | 0.540848 | 6_3:+77266633 | Msa0959790:CDS |
| AACCTGAATTCTCTCTTGCA+CGG | 0.542748 | 6_3:-77265589 | None:intergenic |
| AAGTGTTGAGGCAATAGAAA+GGG | 0.545264 | 6_3:+77265173 | Msa0959790:CDS |
| GAACTATTTGTACCTTGAGC+CGG | 0.545514 | 6_3:-77267912 | None:intergenic |
| AGCAATAACCAAACTTCTGG+TGG | 0.546655 | 6_3:+77268578 | Msa0959790:CDS |
| AATCCCGTGTCGAACAATGT+TGG | 0.546792 | 6_3:+77266527 | Msa0959790:CDS |
| CCATACCACAGTTGATCGGC+GGG | 0.547019 | 6_3:-77267796 | None:intergenic |
| ATAAGGGTAGCATCCCTAAG+AGG | 0.547041 | 6_3:+77267745 | Msa0959790:CDS |
| TATGGATCAACCAAGAATCT+GGG | 0.548472 | 6_3:+77268528 | Msa0959790:CDS |
| TGAAAAGTTTGGTATTGATG+AGG | 0.549156 | 6_3:+77265494 | Msa0959790:CDS |
| AGGAAGTATGGTAATATCAA+AGG | 0.551644 | 6_3:+77264201 | Msa0959790:CDS |
| TTTCATCACATGAGGCCAAA+CGG | 0.552918 | 6_3:-77265047 | None:intergenic |
| TCAACACTTAATCCTACTGT+TGG | 0.555166 | 6_3:-77265159 | None:intergenic |
| CCCGCCGATCAACTGTGGTA+TGG | 0.556456 | 6_3:+77267796 | Msa0959790:CDS |
| TAAGTGTTGAGGCAATAGAA+AGG | 0.556870 | 6_3:+77265172 | Msa0959790:CDS |
| CCTCGACTCCTGGATCAAGA+TGG | 0.559242 | 6_3:+77267264 | Msa0959790:CDS |
| GCCTGATATAGACTTCAACT+TGG | 0.559696 | 6_3:+77267831 | Msa0959790:CDS |
| GATGCATCCTTTGAGCTGAA+TGG | 0.566318 | 6_3:-77264265 | None:intergenic |
| TTTGTTATCCAAGCCAACTC+GGG | 0.567675 | 6_3:-77265262 | None:intergenic |
| AAAGCTAGTGCAAAGACCTC+AGG | 0.569315 | 6_3:+77268605 | Msa0959790:CDS |
| ACGACATCACCGACATATGC+GGG | 0.570605 | 6_3:-77266332 | None:intergenic |
| AACTAGTACTACGATCAAGT+TGG | 0.571521 | 6_3:-77263061 | None:intergenic |
| TCGCAAGAGCCTAAAGAAGA+TGG | 0.571853 | 6_3:+77266626 | Msa0959790:CDS |
| GCCTTCGAATAGTGCAGTGA+TGG | 0.573192 | 6_3:+77268898 | Msa0959790:CDS |
| ATTGAAACAAGGCTAGAAGT+TGG | 0.573990 | 6_3:+77266482 | Msa0959790:CDS |
| AATGAGCGAGGTATGTGCCT+TGG | 0.574392 | 6_3:+77266421 | Msa0959790:CDS |
| TTGAAGATGAAGAATTGTGA+AGG | 0.575668 | 6_3:-77262793 | None:intergenic |
| AATCGAGACAAGATCCAGCC+AGG | 0.576251 | 6_3:+77268669 | Msa0959790:CDS |
| TAGTGGCTAAAACTGCATCT+TGG | 0.576575 | 6_3:-77265341 | None:intergenic |
| TGTGGAAAGATCATCAAAAG+AGG | 0.580766 | 6_3:+77264140 | Msa0959790:CDS |
| GAGCGAGGTATGTGCCTTGG+AGG | 0.581153 | 6_3:+77266424 | Msa0959790:CDS |
| AATAGAAAGGGCTACTAAGA+CGG | 0.581906 | 6_3:+77265185 | Msa0959790:CDS |
| GAAAGGGCTACTAAGACGGA+TGG | 0.583377 | 6_3:+77265189 | Msa0959790:CDS |
| GACGACATCACCGACATATG+CGG | 0.584649 | 6_3:-77266333 | None:intergenic |
| ATTTGTTATCCAAGCCAACT+CGG | 0.586001 | 6_3:-77265263 | None:intergenic |
| CATACAACCATTCAGCTCAA+AGG | 0.586848 | 6_3:+77264258 | Msa0959790:CDS |
| AATCTTGAATAATATCTGAT+GGG | 0.586921 | 6_3:-77266556 | None:intergenic |
| CGTCTGTACAGATATCAACA+TGG | 0.587148 | 6_3:+77266352 | Msa0959790:CDS |
| GTGAAAGCGTAGGCATTCGA+TGG | 0.590183 | 6_3:+77268456 | Msa0959790:CDS |
| TCCATCACTGCACTATTCGA+AGG | 0.590384 | 6_3:-77268899 | None:intergenic |
| TGTTGAAACGACCCAGATGA+GGG | 0.594117 | 6_3:-77262863 | None:intergenic |
| GACCCAACATTGTTCGACAC+GGG | 0.595452 | 6_3:-77266530 | None:intergenic |
| GTCTGTACAGATATCAACAT+GGG | 0.598911 | 6_3:+77266353 | Msa0959790:CDS |
| CCATCTTGATCCAGGAGTCG+AGG | 0.603336 | 6_3:-77267264 | None:intergenic |
| CGCCACCCGCCGATCAACTG+TGG | 0.603692 | 6_3:+77267791 | Msa0959790:CDS |
| TTGGCTTCCTGAACGAGACA+GGG | 0.604129 | 6_3:-77265442 | None:intergenic |
| ATCACATGAGGCCAAACGGA+GGG | 0.605249 | 6_3:-77265043 | None:intergenic |
| ATGAGAACTCCCGCATATGT+CGG | 0.606647 | 6_3:+77266323 | Msa0959790:CDS |
| TCTTGGTTGATCCATATGAA+AGG | 0.609363 | 6_3:-77268521 | None:intergenic |
| CTTGATCCAGGAGTCGAGGA+AGG | 0.609556 | 6_3:-77267260 | None:intergenic |
| ATGAAAGGTGCAACATTCCG+AGG | 0.610005 | 6_3:-77268506 | None:intergenic |
| TAAGGGTAGCATCCCTAAGA+GGG | 0.611091 | 6_3:+77267746 | Msa0959790:CDS |
| ATATTCGATGTCAACCTCCA+AGG | 0.613501 | 6_3:-77266438 | None:intergenic |
| GGATCCTTAAACGACTTCGT+AGG | 0.614448 | 6_3:+77262997 | Msa0959790:CDS |
| ATGTTGAAACGACCCAGATG+AGG | 0.619887 | 6_3:-77262864 | None:intergenic |
| GACGGATGGATCTTCCTCAA+AGG | 0.621067 | 6_3:+77265203 | Msa0959790:CDS |
| AACAGTAGGATTAAGTGTTG+AGG | 0.624183 | 6_3:+77265161 | Msa0959790:CDS |
| CAATATTGGAGATTGAAACA+AGG | 0.629662 | 6_3:+77266471 | Msa0959790:CDS |
| CATACCTCGCTCATTTCCAT+CGG | 0.629923 | 6_3:-77266413 | None:intergenic |
| GAAACCATACCACAGTTGAT+CGG | 0.632911 | 6_3:-77267800 | None:intergenic |
| AGGGATGATGATGATAGTGA+TGG | 0.634372 | 6_3:-77265423 | None:intergenic |
| ACCCTCATCCCAATGATACA+GGG | 0.634983 | 6_3:-77266386 | None:intergenic |
| ACCATACCACAGTTGATCGG+CGG | 0.637112 | 6_3:-77267797 | None:intergenic |
| AAGCAATTAGGTCTTGCAGA+AGG | 0.637792 | 6_3:+77266593 | Msa0959790:CDS |
| GTTGTGATTGTAAGAATGAG+TGG | 0.638077 | 6_3:-77262569 | None:intergenic |
| GTTGGTGAGCTAGAGAAAGA+GGG | 0.642446 | 6_3:+77266500 | Msa0959790:CDS |
| AGGACCTCTGTGATATACCA+TGG | 0.648055 | 6_3:+77264961 | Msa0959790:CDS |
| CGGTTCTGGACTATCACCTG+AGG | 0.654907 | 6_3:-77268621 | None:intergenic |
| TGTTATTGCTGTTGTTGCTG+CGG | 0.657780 | 6_3:+77262956 | Msa0959790:CDS |
| AGACCCAACATTGTTCGACA+CGG | 0.659175 | 6_3:-77266531 | None:intergenic |
| TACCACAGTTGATCGGCGGG+TGG | 0.667424 | 6_3:-77267793 | None:intergenic |
| TTGTGATTGTAAGAATGAGT+GGG | 0.670047 | 6_3:-77262568 | None:intergenic |
| CATCACATGAGGCCAAACGG+AGG | 0.674711 | 6_3:-77265044 | None:intergenic |
| TGGTACCTGTGAAACATGCT+TGG | 0.690113 | 6_3:-77267309 | None:intergenic |
| ATATGCGGGAGTTCTCATGT+TGG | 0.690179 | 6_3:-77266318 | None:intergenic |
| CTTCGTCGGAGAAAGAGGCA+TGG | 0.690552 | 6_3:+77265013 | Msa0959790:CDS |
| CTCCCAAATAGTGAAAGCGT+AGG | 0.693841 | 6_3:+77268446 | Msa0959790:CDS |
| CTCATCCCAATGATACAGGG+TGG | 0.698539 | 6_3:-77266383 | None:intergenic |
| GCTTCCATGGTATATCACAG+AGG | 0.709584 | 6_3:-77264965 | None:intergenic |
| TCTTCCGATGGAAATGAGCG+AGG | 0.715274 | 6_3:+77266409 | Msa0959790:CDS |
| AGGCATTCGATGGATGCTAG+CGG | 0.718095 | 6_3:+77268466 | Msa0959790:CDS |
| TCTGTACAGATATCAACATG+GGG | 0.718675 | 6_3:+77266354 | Msa0959790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAATTCAAAAAAAAAA+AGG | - | chr6_3:77263153-77263172 | None:intergenic | 10.0% |
| !! | AAACTATTAAGAAATATTTA+GGG | + | chr6_3:77263781-77263800 | Msa0959790:intron | 10.0% |
| !!! | TTTTAATTTGTGATATTTTA+AGG | + | chr6_3:77264423-77264442 | Msa0959790:intron | 10.0% |
| !!! | ATATAAGTTATATAATTTTC+AGG | + | chr6_3:77265867-77265886 | Msa0959790:intron | 10.0% |
| !!! | TTTTGAAATTTATAATCTAT+AGG | - | chr6_3:77267119-77267138 | None:intergenic | 10.0% |
| !!! | TTTATTTATTTATTTTTTGG+GGG | - | chr6_3:77267497-77267516 | None:intergenic | 10.0% |
| !!! | GTTTATTTATTTATTTTTTG+GGG | - | chr6_3:77267498-77267517 | None:intergenic | 10.0% |
| !!! | GTGTTTATTTATTTATTTTT+TGG | - | chr6_3:77267500-77267519 | None:intergenic | 10.0% |
| !! | TTGAATTGAATTGAATATTT+GGG | - | chr6_3:77262644-77262663 | None:intergenic | 15.0% |
| !! | ATTGAATTGAATTGAATATT+TGG | - | chr6_3:77262645-77262664 | None:intergenic | 15.0% |
| !!! | AAAAAAACTATCACATTTTT+GGG | - | chr6_3:77262687-77262706 | None:intergenic | 15.0% |
| !!! | AAAAATGTGATAGTTTTTTT+GGG | + | chr6_3:77262687-77262706 | Msa0959790:five_prime_UTR | 15.0% |
| !!! | AGAAAAAAATCGATTATTTT+GGG | - | chr6_3:77262723-77262742 | None:intergenic | 15.0% |
| !!! | TAGAAAAAAATCGATTATTT+TGG | - | chr6_3:77262724-77262743 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAAAGGATTTTTG+TGG | - | chr6_3:77263143-77263162 | None:intergenic | 15.0% |
| !! | GAAACTATTAAGAAATATTT+AGG | + | chr6_3:77263780-77263799 | Msa0959790:intron | 15.0% |
| !!! | GAATATTAGTTTTAGTTATT+TGG | + | chr6_3:77264469-77264488 | Msa0959790:intron | 15.0% |
| !!! | TAATTTTTTTCAAAAACTGA+CGG | - | chr6_3:77265230-77265249 | None:intergenic | 15.0% |
| !! | TTAAATTGATATTAGTACTT+AGG | + | chr6_3:77265741-77265760 | Msa0959790:intron | 15.0% |
| !! | GATATAATATTCTAAATCTA+GGG | - | chr6_3:77265781-77265800 | None:intergenic | 15.0% |
| !!! | TTGAAAACTTTATTTTGTTA+TGG | + | chr6_3:77266256-77266275 | Msa0959790:intron | 15.0% |
| !! | AAAATATAATATGATGCTAT+AGG | - | chr6_3:77267016-77267035 | None:intergenic | 15.0% |
| !! | ATAGCTTATAAAAAAATAGT+CGG | - | chr6_3:77268110-77268129 | None:intergenic | 15.0% |
| !!! | ACTTTAAGAAAAAAATCTTT+GGG | + | chr6_3:77268316-77268335 | Msa0959790:intron | 15.0% |
| !!! | AAAAAACTATCACATTTTTG+GGG | - | chr6_3:77262686-77262705 | None:intergenic | 20.0% |
| !!! | CAAAAAAACTATCACATTTT+TGG | - | chr6_3:77262688-77262707 | None:intergenic | 20.0% |
| !!! | CAAAAATGTGATAGTTTTTT+TGG | + | chr6_3:77262686-77262705 | Msa0959790:five_prime_UTR | 20.0% |
| !!! | AAAATGTGATAGTTTTTTTG+GGG | + | chr6_3:77262688-77262707 | Msa0959790:five_prime_UTR | 20.0% |
| !!! | TCTTCAATTATTGGAATTTT+GGG | - | chr6_3:77262891-77262910 | None:intergenic | 20.0% |
| !!! | TTCTTCAATTATTGGAATTT+TGG | - | chr6_3:77262892-77262911 | None:intergenic | 20.0% |
| !! | AATTCCAATAATTGAAGAAA+TGG | + | chr6_3:77262893-77262912 | Msa0959790:exon | 20.0% |
| !! | ATAACCATTTCTTCAATTAT+TGG | - | chr6_3:77262900-77262919 | None:intergenic | 20.0% |
| !! | AATAATTGAAGAAATGGTTA+TGG | + | chr6_3:77262899-77262918 | Msa0959790:exon | 20.0% |
| !! | ATATACTTATGTTATCTTAG+TGG | - | chr6_3:77263435-77263454 | None:intergenic | 20.0% |
| !! | TATATACTTATGTCATTAAG+TGG | - | chr6_3:77263583-77263602 | None:intergenic | 20.0% |
| !! | TTCTATGTATAGTAGAAAAT+AGG | + | chr6_3:77263650-77263669 | Msa0959790:intron | 20.0% |
| !! | TCTATGTATAGTAGAAAATA+GGG | + | chr6_3:77263651-77263670 | Msa0959790:intron | 20.0% |
| !!! | TATTTTAAGGTTGATTTCTT+TGG | + | chr6_3:77264436-77264455 | Msa0959790:intron | 20.0% |
| !!! | TGATTTGCAATGAATTTTAT+AGG | + | chr6_3:77264908-77264927 | Msa0959790:intron | 20.0% |
| !!! | GATTTGCAATGAATTTTATA+GGG | + | chr6_3:77264909-77264928 | Msa0959790:intron | 20.0% |
| !! | GGATATAATATTCTAAATCT+AGG | - | chr6_3:77265782-77265801 | None:intergenic | 20.0% |
| !!! | ATTATTTAGCTTAACACATT+AGG | + | chr6_3:77265841-77265860 | Msa0959790:intron | 20.0% |
| !! | ATCTTCTACATTTGAATTAA+TGG | + | chr6_3:77265900-77265919 | Msa0959790:intron | 20.0% |
| !!! | AAATAACGATTTGTTCAAAT+TGG | + | chr6_3:77266064-77266083 | Msa0959790:intron | 20.0% |
| !! | AATCTTGAATAATATCTGAT+GGG | - | chr6_3:77266559-77266578 | None:intergenic | 20.0% |
| !! | AAATCTTGAATAATATCTGA+TGG | - | chr6_3:77266560-77266579 | None:intergenic | 20.0% |
| !!! | ATTGTTTTATTCCACAAATA+TGG | - | chr6_3:77266882-77266901 | None:intergenic | 20.0% |
| !! | TTATAATCTATAGGAAAACA+AGG | - | chr6_3:77267110-77267129 | None:intergenic | 20.0% |
| !! | ATTCTTAATAATGAAAGAAC+GGG | - | chr6_3:77267381-77267400 | None:intergenic | 20.0% |
| !! | GATTCTTAATAATGAAAGAA+CGG | - | chr6_3:77267382-77267401 | None:intergenic | 20.0% |
| !! | ATTAGCTATTTATAACTTCA+TGG | - | chr6_3:77267664-77267683 | None:intergenic | 20.0% |
| !!! | TGACTTTGTTTATTATCAAA+AGG | + | chr6_3:77267705-77267724 | Msa0959790:intron | 20.0% |
| !! | TTTCATAACTTAACGAAAAA+GGG | - | chr6_3:77267937-77267956 | None:intergenic | 20.0% |
| !!! | TCTTTTTCATAGATTAAACA+AGG | - | chr6_3:77268004-77268023 | None:intergenic | 20.0% |
| !! | GTAGTTTATCTAAATAAACA+AGG | - | chr6_3:77268033-77268052 | None:intergenic | 20.0% |
| !!! | GACTTTAAGAAAAAAATCTT+TGG | + | chr6_3:77268315-77268334 | Msa0959790:intron | 20.0% |
| !!! | CTTTAAGAAAAAAATCTTTG+GGG | + | chr6_3:77268317-77268336 | Msa0959790:intron | 20.0% |
| !! | TAAAAATTAAGTTTGCAAGT+GGG | - | chr6_3:77268388-77268407 | None:intergenic | 20.0% |
| !! | ATAAAAATTAAGTTTGCAAG+TGG | - | chr6_3:77268389-77268408 | None:intergenic | 20.0% |
| !! | CATTCATAAAATAAGAATGT+TGG | + | chr6_3:77269194-77269213 | Msa0959790:three_prime_UTR | 20.0% |
| !! | AAATAAAGAGCAACTATATA+TGG | - | chr6_3:77269442-77269461 | None:intergenic | 20.0% |
| !!! | CATTTTTGGGGTTTTTTATT+TGG | - | chr6_3:77262674-77262693 | None:intergenic | 25.0% |
| !!! | TAGTGCAAAATCACTTTTTT+TGG | - | chr6_3:77262749-77262768 | None:intergenic | 25.0% |
| !! | TTCAACTTGTTTCTTCAAAA+GGG | + | chr6_3:77262811-77262830 | Msa0959790:five_prime_UTR | 25.0% |
| !!! | ATCCTATTTGGTTTTTTTCT+TGG | + | chr6_3:77262933-77262952 | Msa0959790:CDS | 25.0% |
| ! | TCATCAATCTTTCAAAAAAG+AGG | + | chr6_3:77263103-77263122 | Msa0959790:CDS | 25.0% |
| ! | TAGAAAATAGGGTAGAAAAT+AGG | + | chr6_3:77263662-77263681 | Msa0959790:intron | 25.0% |
| ! | GTTTCTCTTATAGTTATTCT+AGG | - | chr6_3:77263765-77263784 | None:intergenic | 25.0% |
| ! | ATCTACTTATGTTATCTTAG+TGG | - | chr6_3:77263964-77263983 | None:intergenic | 25.0% |
| ! | ATTGTTCATGTCATTGATAT+TGG | + | chr6_3:77264045-77264064 | Msa0959790:intron | 25.0% |
| ! | TTGTTCATGTCATTGATATT+GGG | + | chr6_3:77264046-77264065 | Msa0959790:intron | 25.0% |
| ! | TGTCAAATTAACCAAGTAAT+TGG | + | chr6_3:77264557-77264576 | Msa0959790:intron | 25.0% |
| ! | GTCAAATTAACCAAGTAATT+GGG | + | chr6_3:77264558-77264577 | Msa0959790:intron | 25.0% |
| !!! | TCTTAAAGAAGTGTTGTAAA+CGG | + | chr6_3:77264687-77264706 | Msa0959790:intron | 25.0% |
| ! | AACATGTTATCTCTTTCTTT+AGG | - | chr6_3:77264784-77264803 | None:intergenic | 25.0% |
| ! | TGTCATACTTCATATGATTA+TGG | + | chr6_3:77264821-77264840 | Msa0959790:intron | 25.0% |
| ! | AAAAGAAAACTGAGAAACTT+CGG | + | chr6_3:77265313-77265332 | Msa0959790:CDS | 25.0% |
| !! | ATCAATACCAAACTTTTCAT+CGG | - | chr6_3:77265493-77265512 | None:intergenic | 25.0% |
| ! | TTTGATATCAAAAAAGAGTC+GGG | - | chr6_3:77265547-77265566 | None:intergenic | 25.0% |
| ! | CTTTGATATCAAAAAAGAGT+CGG | - | chr6_3:77265548-77265567 | None:intergenic | 25.0% |
| ! | TCAACTGCATAAATTCATAT+AGG | - | chr6_3:77265624-77265643 | None:intergenic | 25.0% |
| !! | TATTATATCCTTTTAGCAAC+AGG | + | chr6_3:77265792-77265811 | Msa0959790:intron | 25.0% |
| ! | TCTACATTTGAATTAATGGA+AGG | + | chr6_3:77265904-77265923 | Msa0959790:intron | 25.0% |
| ! | AACATTAGCAATTTAACTAC+TGG | + | chr6_3:77265944-77265963 | Msa0959790:intron | 25.0% |
| !!! | TATTTTGTTATGGTAAGTGA+TGG | + | chr6_3:77266266-77266285 | Msa0959790:intron | 25.0% |
| ! | GAGTATTTAGATAAGCAATT+AGG | + | chr6_3:77266581-77266600 | Msa0959790:CDS | 25.0% |
| ! | ATAAAACAATTCACATGTCT+TGG | + | chr6_3:77266892-77266911 | Msa0959790:intron | 25.0% |
| !!! | GTAAATTTTTCTAGCACTTT+TGG | + | chr6_3:77266953-77266972 | Msa0959790:intron | 25.0% |
| ! | ATATAATATGATGCTATAGG+TGG | - | chr6_3:77267013-77267032 | None:intergenic | 25.0% |
| !!! | TTTTTTTACATTTGTCACAC+TGG | + | chr6_3:77267049-77267068 | Msa0959790:intron | 25.0% |
| ! | TTCAAAAAATATTTCTCGTG+TGG | + | chr6_3:77267132-77267151 | Msa0959790:intron | 25.0% |
| ! | TCAAAAAATATTTCTCGTGT+GGG | + | chr6_3:77267133-77267152 | Msa0959790:intron | 25.0% |
| ! | TTCTTAATAATGAAAGAACG+GGG | - | chr6_3:77267380-77267399 | None:intergenic | 25.0% |
| ! | TGCTAAATAACTATGTAAAG+TGG | + | chr6_3:77267402-77267421 | Msa0959790:intron | 25.0% |
| !! | AAATGATTTAAAGTTCACGA+AGG | - | chr6_3:77267434-77267453 | None:intergenic | 25.0% |
| !!! | TTATTTATTTTTTGGGGGAA+GGG | - | chr6_3:77267492-77267511 | None:intergenic | 25.0% |
| !!! | TTTATTTATTTTTTGGGGGA+AGG | - | chr6_3:77267493-77267512 | None:intergenic | 25.0% |
| ! | ATAAATAAACACGAACTTGT+AGG | + | chr6_3:77267508-77267527 | Msa0959790:intron | 25.0% |
| ! | CTTTCATAACTTAACGAAAA+AGG | - | chr6_3:77267938-77267957 | None:intergenic | 25.0% |
| !!! | CTTTTTCGTTAAGTTATGAA+AGG | + | chr6_3:77267936-77267955 | Msa0959790:intron | 25.0% |
| ! | TCAAATAAACCAATTCAAAC+AGG | + | chr6_3:77268244-77268263 | Msa0959790:intron | 25.0% |
| ! | TTTCTTAAAGTCATTTCTGA+AGG | - | chr6_3:77268307-77268326 | None:intergenic | 25.0% |
| !!! | AATTTTTATTTCTCTTCTGC+AGG | + | chr6_3:77268400-77268419 | Msa0959790:intron | 25.0% |
| ! | TCAAAACCTTTATTAGAAAG+TGG | + | chr6_3:77268770-77268789 | Msa0959790:CDS | 25.0% |
| !!! | TCCCTTTTTCCAATTTTTTT+CGG | - | chr6_3:77268971-77268990 | None:intergenic | 25.0% |
| ! | AAAAAATTGGAAAAAGGGAA+AGG | + | chr6_3:77268972-77268991 | Msa0959790:CDS | 25.0% |
| ! | TAGAAGAAGCCAAAAAAAAT+TGG | + | chr6_3:77269041-77269060 | Msa0959790:CDS | 25.0% |
| !!! | TCACTTCTTCCAATTTTTTT+TGG | - | chr6_3:77269053-77269072 | None:intergenic | 25.0% |
| ! | AAAAAATTGGAAGAAGTGAA+AGG | + | chr6_3:77269054-77269073 | Msa0959790:exon | 25.0% |
| !! | TGATGAGTTGTATAGTTTTT+AGG | + | chr6_3:77269235-77269254 | Msa0959790:three_prime_UTR | 25.0% |
| !! | GATGAGTTGTATAGTTTTTA+GGG | + | chr6_3:77269236-77269255 | Msa0959790:three_prime_UTR | 25.0% |
| !!! | ATGAGTTGTATAGTTTTTAG+GGG | + | chr6_3:77269237-77269256 | Msa0959790:three_prime_UTR | 25.0% |
| !! | AGATGATTCTTTTAGTAGTT+TGG | + | chr6_3:77269381-77269400 | Msa0959790:three_prime_UTR | 25.0% |
| !! | ATATAGTTGCTCTTTATTTG+AGG | + | chr6_3:77269443-77269462 | Msa0959790:three_prime_UTR | 25.0% |
| !! | TTTAGCGGTTTGATAATGAA+TGG | - | chr6_3:77262539-77262558 | None:intergenic | 30.0% |
| TTGTGATTGTAAGAATGAGT+GGG | - | chr6_3:77262571-77262590 | None:intergenic | 30.0% | |
| ! | TTGGGTATTTTGTGAATGAA+TGG | - | chr6_3:77262626-77262645 | None:intergenic | 30.0% |
| ATGAAGAATTGTGAAGGAAT+TGG | - | chr6_3:77262790-77262809 | None:intergenic | 30.0% | |
| TTGAAGATGAAGAATTGTGA+AGG | - | chr6_3:77262796-77262815 | None:intergenic | 30.0% | |
| ! | CTTCAACTTGTTTCTTCAAA+AGG | + | chr6_3:77262810-77262829 | Msa0959790:five_prime_UTR | 30.0% |
| GTTTCTTTGTTGATCCTATT+TGG | + | chr6_3:77262921-77262940 | Msa0959790:CDS | 30.0% | |
| CACCAAGAAAAAAACCAAAT+AGG | - | chr6_3:77262938-77262957 | None:intergenic | 30.0% | |
| TAGATTCTACTACACAATGA+GGG | - | chr6_3:77263194-77263213 | None:intergenic | 30.0% | |
| ATAGATTCTACTACACAATG+AGG | - | chr6_3:77263195-77263214 | None:intergenic | 30.0% | |
| TGGTAGAAAAGATTGTAGTA+AGG | + | chr6_3:77263691-77263710 | Msa0959790:intron | 30.0% | |
| TAGATCAGATGAAGTATAGT+CGG | + | chr6_3:77263718-77263737 | Msa0959790:intron | 30.0% | |
| ATGTCATTGATATTGGGTTT+GGG | + | chr6_3:77264052-77264071 | Msa0959790:intron | 30.0% | |
| ! | AAGGAAAAAAGAGGTTTTTG+AGG | + | chr6_3:77264167-77264186 | Msa0959790:CDS | 30.0% |
| ATATTACCATACTTCCTAAC+AGG | - | chr6_3:77264198-77264217 | None:intergenic | 30.0% | |
| ! | AGGAAGTATGGTAATATCAA+AGG | + | chr6_3:77264201-77264220 | Msa0959790:CDS | 30.0% |
| CTCCTACAAAAAAATGGTAA+TGG | + | chr6_3:77264313-77264332 | Msa0959790:intron | 30.0% | |
| !!! | CACCATTACCATTTTTTTGT+AGG | - | chr6_3:77264318-77264337 | None:intergenic | 30.0% |
| !! | AAAAATGGTAATGGTGTTTG+TGG | + | chr6_3:77264322-77264341 | Msa0959790:intron | 30.0% |
| !! | CTTAAAGAAGTGTTGTAAAC+GGG | + | chr6_3:77264688-77264707 | Msa0959790:intron | 30.0% |
| AGAGATAACATGTTATAGCT+TGG | + | chr6_3:77264790-77264809 | Msa0959790:intron | 30.0% | |
| ATTCTCATAATCATTAACCG+AGG | + | chr6_3:77264860-77264879 | Msa0959790:intron | 30.0% | |
| TGTGTAGTACATAATTTCCT+CGG | - | chr6_3:77264880-77264899 | None:intergenic | 30.0% | |
| ! | TTTTTCTCTTTCATCACATG+AGG | - | chr6_3:77265058-77265077 | None:intergenic | 30.0% |
| ATGAAAGAGAAAAACTCCAA+TGG | + | chr6_3:77265064-77265083 | Msa0959790:CDS | 30.0% | |
| ! | TCTTTTATGAAACCAACAGT+AGG | + | chr6_3:77265147-77265166 | Msa0959790:CDS | 30.0% |
| AAAGAAAACTGAGAAACTTC+GGG | + | chr6_3:77265314-77265333 | Msa0959790:CDS | 30.0% | |
| !! | ACCATTTTTCATATAGCTAG+TGG | - | chr6_3:77265361-77265380 | None:intergenic | 30.0% |
| AACAGACAGAAAAATGACTT+TGG | - | chr6_3:77265464-77265483 | None:intergenic | 30.0% | |
| !! | TGAAAAGTTTGGTATTGATG+AGG | + | chr6_3:77265494-77265513 | Msa0959790:CDS | 30.0% |
| !! | GAAAAGTTTGGTATTGATGA+GGG | + | chr6_3:77265495-77265514 | Msa0959790:CDS | 30.0% |
| !!! | CGACTCTTTTTTGATATCAA+AGG | + | chr6_3:77265546-77265565 | Msa0959790:CDS | 30.0% |
| ! | TAGTACTTAGGCATTCATTT+TGG | + | chr6_3:77265753-77265772 | Msa0959790:intron | 30.0% |
| CATTTGAATTAATGGAAGGA+AGG | + | chr6_3:77265908-77265927 | Msa0959790:intron | 30.0% | |
| TCTCAACAATCTTAAAGGAA+TGG | - | chr6_3:77265996-77266015 | None:intergenic | 30.0% | |
| CATTCTCTCAACAATCTTAA+AGG | - | chr6_3:77266001-77266020 | None:intergenic | 30.0% | |
| TAAAACAGCGTAGTCAAATA+GGG | - | chr6_3:77266220-77266239 | None:intergenic | 30.0% | |
| ATAAAACAGCGTAGTCAAAT+AGG | - | chr6_3:77266221-77266240 | None:intergenic | 30.0% | |
| !!! | TGACTACGCTGTTTTATTTA+CGG | + | chr6_3:77266224-77266243 | Msa0959790:intron | 30.0% |
| !!! | GTCTTCTCTATTTTTTACAG+AGG | + | chr6_3:77266288-77266307 | Msa0959790:intron | 30.0% |
| ! | ATATTCTGGAAGTGCAATAT+TGG | + | chr6_3:77266457-77266476 | Msa0959790:CDS | 30.0% |
| CAATATTGGAGATTGAAACA+AGG | + | chr6_3:77266471-77266490 | Msa0959790:CDS | 30.0% | |
| ! | TTTTTCTCCCGTTAAAATGT+AGG | + | chr6_3:77266734-77266753 | Msa0959790:intron | 30.0% |
| ! | TTTCCTCACCTACATTTTAA+CGG | - | chr6_3:77266745-77266764 | None:intergenic | 30.0% |
| !! | AAGCTTGAGTTTTTAGATGA+AGG | - | chr6_3:77266812-77266831 | None:intergenic | 30.0% |
| ATCTAAAAACTCAAGCTTTC+TGG | + | chr6_3:77266814-77266833 | Msa0959790:intron | 30.0% | |
| !! | TGTCTTGGTTTTTAAAAGAG+AGG | + | chr6_3:77266907-77266926 | Msa0959790:intron | 30.0% |
| ! | GTGGTTTTCAACAGTTTTTT+TGG | + | chr6_3:77267084-77267103 | Msa0959790:intron | 30.0% |
| AGCACTTATATCTAGATATC+AGG | - | chr6_3:77267167-77267186 | None:intergenic | 30.0% | |
| TCTTAATAATGAAAGAACGG+GGG | - | chr6_3:77267379-77267398 | None:intergenic | 30.0% | |
| !!! | TATTTATTTTTTGGGGGAAG+GGG | - | chr6_3:77267491-77267510 | None:intergenic | 30.0% |
| TGTAGGTGAAAACATTTGAA+TGG | + | chr6_3:77267525-77267544 | Msa0959790:intron | 30.0% | |
| GTTACATCATGAACAACTAA+AGG | + | chr6_3:77267558-77267577 | Msa0959790:intron | 30.0% | |
| ! | GCATAACTATTGACTACTTA+GGG | - | chr6_3:77268270-77268289 | None:intergenic | 30.0% |
| ! | TGCATAACTATTGACTACTT+AGG | - | chr6_3:77268271-77268290 | None:intergenic | 30.0% |
| TAGTCAATAGTTATGCACAA+AGG | + | chr6_3:77268274-77268293 | Msa0959790:intron | 30.0% | |
| AGTCAATAGTTATGCACAAA+GGG | + | chr6_3:77268275-77268294 | Msa0959790:intron | 30.0% | |
| CTGTTCATTTCTATAAACGA+AGG | - | chr6_3:77268358-77268377 | None:intergenic | 30.0% | |
| TCGTTTATAGAAATGAACAG+AGG | + | chr6_3:77268358-77268377 | Msa0959790:intron | 30.0% | |
| GTTTGGTTATTGCTATCAAT+TGG | - | chr6_3:77268572-77268591 | None:intergenic | 30.0% | |
| !! | CTCTTCAGTTTTTCTTGTTT+CGG | - | chr6_3:77268644-77268663 | None:intergenic | 30.0% |
| ! | AATCACTAGTTTCTTGTTGT+TGG | - | chr6_3:77268796-77268815 | None:intergenic | 30.0% |
| ACAAGAAACTAGTGATTTGA+AGG | + | chr6_3:77268799-77268818 | Msa0959790:CDS | 30.0% | |
| GATTCAAAGCCGAAAAAAAT+TGG | + | chr6_3:77268959-77268978 | Msa0959790:CDS | 30.0% | |
| AGCCGAAAAAAATTGGAAAA+AGG | + | chr6_3:77268966-77268985 | Msa0959790:CDS | 30.0% | |
| GCCGAAAAAAATTGGAAAAA+GGG | + | chr6_3:77268967-77268986 | Msa0959790:CDS | 30.0% | |
| AGTTCCAAAATTCTTTGACT+TGG | + | chr6_3:77269327-77269346 | Msa0959790:three_prime_UTR | 30.0% | |
| ! | AGAACCAAGTCAAAGAATTT+TGG | - | chr6_3:77269334-77269353 | None:intergenic | 30.0% |
| GCAATTCTCACAAGATTATT+TGG | - | chr6_3:77269410-77269429 | None:intergenic | 30.0% | |
| CAGAGAAAATTTGACACTAA+TGG | - | chr6_3:77269505-77269524 | None:intergenic | 30.0% | |
| GTTGTGATTGTAAGAATGAG+TGG | - | chr6_3:77262572-77262591 | None:intergenic | 35.0% | |
| TGAGGGAATCGATAAAAGAA+TGG | - | chr6_3:77262849-77262868 | None:intergenic | 35.0% | |
| !!! | TTTTATCGATTCCCTCATCT+GGG | + | chr6_3:77262852-77262871 | Msa0959790:five_prime_UTR | 35.0% |
| ! | TTTTCCTACGAAGTCGTTTA+AGG | - | chr6_3:77263004-77263023 | None:intergenic | 35.0% |
| AACTAGTACTACGATCAAGT+TGG | - | chr6_3:77263064-77263083 | None:intergenic | 35.0% | |
| ATATTTAGGGAGCAATGAGT+TGG | + | chr6_3:77263794-77263813 | Msa0959790:intron | 35.0% | |
| ! | CAATGAGTTGGATCGAAATA+TGG | + | chr6_3:77263806-77263825 | Msa0959790:intron | 35.0% |
| CATGTCATTGATATTGGGTT+TGG | + | chr6_3:77264051-77264070 | Msa0959790:intron | 35.0% | |
| ! | ATTGATATTGGGTTTGGGTT+TGG | + | chr6_3:77264057-77264076 | Msa0959790:intron | 35.0% |
| ! | TTGATATTGGGTTTGGGTTT+GGG | + | chr6_3:77264058-77264077 | Msa0959790:intron | 35.0% |
| !! | AAGTACTTTGAAACCTTCTC+TGG | - | chr6_3:77264120-77264139 | None:intergenic | 35.0% |
| ! | GAAGGTTTCAAAGTACTTTG+TGG | + | chr6_3:77264122-77264141 | Msa0959790:CDS | 35.0% |
| TGTGGAAAGATCATCAAAAG+AGG | + | chr6_3:77264140-77264159 | Msa0959790:CDS | 35.0% | |
| GATCATCAAAAGAGGTGAAA+AGG | + | chr6_3:77264148-77264167 | Msa0959790:CDS | 35.0% | |
| AGAGGTGAAAAGGAAAAAAG+AGG | + | chr6_3:77264158-77264177 | Msa0959790:CDS | 35.0% | |
| !!! | TTTTTGAGGTTTCTCCTGTT+AGG | + | chr6_3:77264181-77264200 | Msa0959790:CDS | 35.0% |
| AGAAACTGAGTTCAATTCCT+GGG | + | chr6_3:77264624-77264643 | Msa0959790:intron | 35.0% | |
| !! | AAAAAAGTACCCGATCAAAG+TGG | + | chr6_3:77264933-77264952 | Msa0959790:CDS | 35.0% |
| ! | CATAAAGAGTTTTGCTTCCA+TGG | - | chr6_3:77264981-77265000 | None:intergenic | 35.0% |
| TGTATATCTTGAGACTTCGT+CGG | + | chr6_3:77264999-77265018 | Msa0959790:CDS | 35.0% | |
| TCAACACTTAATCCTACTGT+TGG | - | chr6_3:77265162-77265181 | None:intergenic | 35.0% | |
| ! | AACAGTAGGATTAAGTGTTG+AGG | + | chr6_3:77265161-77265180 | Msa0959790:CDS | 35.0% |
| !! | TAAGTGTTGAGGCAATAGAA+AGG | + | chr6_3:77265172-77265191 | Msa0959790:CDS | 35.0% |
| !! | AAGTGTTGAGGCAATAGAAA+GGG | + | chr6_3:77265173-77265192 | Msa0959790:CDS | 35.0% |
| AATAGAAAGGGCTACTAAGA+CGG | + | chr6_3:77265185-77265204 | Msa0959790:CDS | 35.0% | |
| !! | ATTTGTTATCCAAGCCAACT+CGG | - | chr6_3:77265266-77265285 | None:intergenic | 35.0% |
| ! | AACAAATGGACTTCATTCTC+AGG | + | chr6_3:77265279-77265298 | Msa0959790:CDS | 35.0% |
| ! | CAGTTTTCTTTTTGTCTTCG+CGG | - | chr6_3:77265305-77265324 | None:intergenic | 35.0% |
| GCCACTAGCTATATGAAAAA+TGG | + | chr6_3:77265357-77265376 | Msa0959790:CDS | 35.0% | |
| TTGATGAGGGAACATTATGT+TGG | + | chr6_3:77265508-77265527 | Msa0959790:CDS | 35.0% | |
| TATTTCAGCGTTGTCAATTG+CGG | + | chr6_3:77266033-77266052 | Msa0959790:intron | 35.0% | |
| GTCTGTACAGATATCAACAT+GGG | + | chr6_3:77266353-77266372 | Msa0959790:CDS | 35.0% | |
| TCTGTACAGATATCAACATG+GGG | + | chr6_3:77266354-77266373 | Msa0959790:CDS | 35.0% | |
| ATTGAAACAAGGCTAGAAGT+TGG | + | chr6_3:77266482-77266501 | Msa0959790:CDS | 35.0% | |
| !! | TTCCTCACCTACATTTTAAC+GGG | - | chr6_3:77266744-77266763 | None:intergenic | 35.0% |
| ! | GGTGAGGAAAATCATAGTTT+TGG | + | chr6_3:77266755-77266774 | Msa0959790:intron | 35.0% |
| AAAAACTCAAGCTTTCTGGA+TGG | + | chr6_3:77266818-77266837 | Msa0959790:intron | 35.0% | |
| AATGTATTAGTGCTCATGCA+TGG | + | chr6_3:77266853-77266872 | Msa0959790:intron | 35.0% | |
| ATGCATGGAAACCATATTTG+TGG | + | chr6_3:77266868-77266887 | Msa0959790:intron | 35.0% | |
| ACACTGGAAATGAAATCATG+TGG | + | chr6_3:77267065-77267084 | Msa0959790:intron | 35.0% | |
| TTCTTTGACACATCTGCAAA+GGG | - | chr6_3:77267224-77267243 | None:intergenic | 35.0% | |
| ATAGATTTCCATCTTGATCC+AGG | - | chr6_3:77267275-77267294 | None:intergenic | 35.0% | |
| AAAGCAACCAATGGGAAAAA+AGG | - | chr6_3:77267352-77267371 | None:intergenic | 35.0% | |
| CTTAATAATGAAAGAACGGG+GGG | - | chr6_3:77267378-77267397 | None:intergenic | 35.0% | |
| !! | TGTTTTTGAGCACTTTCATG+TGG | + | chr6_3:77267597-77267616 | Msa0959790:intron | 35.0% |
| TCAAAAGGTTCCTATCACTT+TGG | + | chr6_3:77267720-77267739 | Msa0959790:intron | 35.0% | |
| TTCCTATCACTTTGGCAATA+AGG | + | chr6_3:77267728-77267747 | Msa0959790:CDS | 35.0% | |
| TCCTATCACTTTGGCAATAA+GGG | + | chr6_3:77267729-77267748 | Msa0959790:CDS | 35.0% | |
| ! | TCCAAGTTGAAGTCTATATC+AGG | - | chr6_3:77267835-77267854 | None:intergenic | 35.0% |
| TTCAACTTGGAATCATCTGT+TGG | + | chr6_3:77267844-77267863 | Msa0959790:CDS | 35.0% | |
| GTCAATAGTTATGCACAAAG+GGG | + | chr6_3:77268276-77268295 | Msa0959790:intron | 35.0% | |
| AAAAAGATGATTGGGTTCCT+CGG | + | chr6_3:77268489-77268508 | Msa0959790:CDS | 35.0% | |
| TCTTGGTTGATCCATATGAA+AGG | - | chr6_3:77268524-77268543 | None:intergenic | 35.0% | |
| ATATGGATCAACCAAGAATC+TGG | + | chr6_3:77268527-77268546 | Msa0959790:CDS | 35.0% | |
| TATGGATCAACCAAGAATCT+GGG | + | chr6_3:77268528-77268547 | Msa0959790:CDS | 35.0% | |
| AAGTTTCATTCCCAGATTCT+TGG | - | chr6_3:77268541-77268560 | None:intergenic | 35.0% | |
| TGGTTATTGCTATCAATTGG+AGG | - | chr6_3:77268569-77268588 | None:intergenic | 35.0% | |
| GATAGCAATAACCAAACTTC+TGG | + | chr6_3:77268575-77268594 | Msa0959790:CDS | 35.0% | |
| !! | AGTTTTTCTTGTTTCGGTTC+TGG | - | chr6_3:77268638-77268657 | None:intergenic | 35.0% |
| GCTGAAAAAGAGAAACTTGA+CGG | - | chr6_3:77268716-77268735 | None:intergenic | 35.0% | |
| !!! | TCTCTTTTTCAGCAGCAATA+AGG | + | chr6_3:77268723-77268742 | Msa0959790:CDS | 35.0% |
| ! | TGTTGGCCACTTTCTAATAA+AGG | - | chr6_3:77268779-77268798 | None:intergenic | 35.0% |
| ATTGTAAGAATGAGTGGGAG+AGG | - | chr6_3:77262566-77262585 | None:intergenic | 40.0% | |
| !!! | CTTTTATCGATTCCCTCATC+TGG | + | chr6_3:77262851-77262870 | Msa0959790:five_prime_UTR | 40.0% |
| ! | TGTTATTGCTGTTGTTGCTG+CGG | + | chr6_3:77262956-77262975 | Msa0959790:CDS | 40.0% |
| CGGAATTTCTTGGTTTCTTG+TGG | + | chr6_3:77262976-77262995 | Msa0959790:CDS | 40.0% | |
| GGGTAGAAAATAGGCTTAGA+TGG | + | chr6_3:77263671-77263690 | Msa0959790:intron | 40.0% | |
| AAGTATAGTCGGATCACTAG+AGG | + | chr6_3:77263729-77263748 | Msa0959790:intron | 40.0% | |
| ! | TGATATTGGGTTTGGGTTTG+GGG | + | chr6_3:77264059-77264078 | Msa0959790:intron | 40.0% |
| GTTTCTTCAGGGTGTAGTTT+GGG | + | chr6_3:77264086-77264105 | Msa0959790:intron | 40.0% | |
| !!! | TTGGGTTTTAGAACCAGAGA+AGG | + | chr6_3:77264104-77264123 | Msa0959790:CDS | 40.0% |
| GTTTCTCCTGTTAGGAAGTA+TGG | + | chr6_3:77264189-77264208 | Msa0959790:CDS | 40.0% | |
| CATACAACCATTCAGCTCAA+AGG | + | chr6_3:77264258-77264277 | Msa0959790:CDS | 40.0% | |
| !!! | TTTTTTTGTAGGAGCGCTTG+TGG | - | chr6_3:77264307-77264326 | None:intergenic | 40.0% |
| CAAGCGCTCCTACAAAAAAA+TGG | + | chr6_3:77264307-77264326 | Msa0959790:CDS | 40.0% | |
| CTCCTGAACAATTCGTCTTT+CGG | - | chr6_3:77264606-77264625 | None:intergenic | 40.0% | |
| GAGAAACTGAGTTCAATTCC+TGG | + | chr6_3:77264623-77264642 | Msa0959790:intron | 40.0% | |
| ! | TCCTGTTTTCCACTTTGATC+GGG | - | chr6_3:77264945-77264964 | None:intergenic | 40.0% |
| ! | GTCCTGTTTTCCACTTTGAT+CGG | - | chr6_3:77264946-77264965 | None:intergenic | 40.0% |
| TTTCATCACATGAGGCCAAA+CGG | - | chr6_3:77265050-77265069 | None:intergenic | 40.0% | |
| ! | TTTGTTATCCAAGCCAACTC+GGG | - | chr6_3:77265265-77265284 | None:intergenic | 40.0% |
| !! | GAGTTGGCTTGGATAACAAA+TGG | + | chr6_3:77265265-77265284 | Msa0959790:CDS | 40.0% |
| TAGTGGCTAAAACTGCATCT+TGG | - | chr6_3:77265344-77265363 | None:intergenic | 40.0% | |
| TCGTCTGATATGGAACTTCT+CGG | - | chr6_3:77265399-77265418 | None:intergenic | 40.0% | |
| ! | AGGGATGATGATGATAGTGA+TGG | - | chr6_3:77265426-77265445 | None:intergenic | 40.0% |
| TCTGACACCGATGAAAAGTT+TGG | + | chr6_3:77265483-77265502 | Msa0959790:CDS | 40.0% | |
| AACCTGAATTCTCTCTTGCA+CGG | - | chr6_3:77265592-77265611 | None:intergenic | 40.0% | |
| AGCTTGAACCTGTTGCTAAA+AGG | - | chr6_3:77265803-77265822 | None:intergenic | 40.0% | |
| CTTAAAGGAATGGAGTTTGC+TGG | - | chr6_3:77265986-77266005 | None:intergenic | 40.0% | |
| GTTCAAATTGGCTATGCTAC+AGG | + | chr6_3:77266076-77266095 | Msa0959790:intron | 40.0% | |
| CGTCTGTACAGATATCAACA+TGG | + | chr6_3:77266352-77266371 | Msa0959790:CDS | 40.0% | |
| AATGTTCCACCCTGTATCAT+TGG | + | chr6_3:77266377-77266396 | Msa0959790:CDS | 40.0% | |
| ATGTTCCACCCTGTATCATT+GGG | + | chr6_3:77266378-77266397 | Msa0959790:CDS | 40.0% | |
| ATATTCGATGTCAACCTCCA+AGG | - | chr6_3:77266441-77266460 | None:intergenic | 40.0% | |
| GAGGTTGACATCGAATATTC+TGG | + | chr6_3:77266443-77266462 | Msa0959790:CDS | 40.0% | |
| AAGCAATTAGGTCTTGCAGA+AGG | + | chr6_3:77266593-77266612 | Msa0959790:CDS | 40.0% | |
| TTCCAGTCACCATCTTCTTT+AGG | - | chr6_3:77266638-77266657 | None:intergenic | 40.0% | |
| !! | TAGCACTTTTGGTGATAGCA+GGG | + | chr6_3:77266964-77266983 | Msa0959790:intron | 40.0% |
| ! | GTTCGAGAAGGAATTTTGGA+AGG | - | chr6_3:77266991-77267010 | None:intergenic | 40.0% |
| ! | GCTCTCATAAAGCATTCAGA+TGG | + | chr6_3:77267184-77267203 | Msa0959790:intron | 40.0% |
| CTTCTTTGACACATCTGCAA+AGG | - | chr6_3:77267225-77267244 | None:intergenic | 40.0% | |
| AGGAGGGAGTTATAAAGAGA+TGG | - | chr6_3:77267332-77267351 | None:intergenic | 40.0% | |
| CAACCAATGGGAAAAAAGGA+GGG | - | chr6_3:77267348-77267367 | None:intergenic | 40.0% | |
| ACCCTTATTGCCAAAGTGAT+AGG | - | chr6_3:77267733-77267752 | None:intergenic | 40.0% | |
| GAAACCATACCACAGTTGAT+CGG | - | chr6_3:77267803-77267822 | None:intergenic | 40.0% | |
| GCCTGATATAGACTTCAACT+TGG | + | chr6_3:77267831-77267850 | Msa0959790:CDS | 40.0% | |
| ! | TTGCTTTGTTCCTGATCAAC+CGG | + | chr6_3:77267893-77267912 | Msa0959790:CDS | 40.0% |
| GAACTATTTGTACCTTGAGC+CGG | - | chr6_3:77267915-77267934 | None:intergenic | 40.0% | |
| TACTTAGGGCCTGTTTGAAT+TGG | - | chr6_3:77268256-77268275 | None:intergenic | 40.0% | |
| TGCCTACGCTTTCACTATTT+GGG | - | chr6_3:77268451-77268470 | None:intergenic | 40.0% | |
| ATGCCTACGCTTTCACTATT+TGG | - | chr6_3:77268452-77268471 | None:intergenic | 40.0% | |
| TGCTAGCGGAAAAAGATGAT+TGG | + | chr6_3:77268480-77268499 | Msa0959790:CDS | 40.0% | |
| GCTAGCGGAAAAAGATGATT+GGG | + | chr6_3:77268481-77268500 | Msa0959790:CDS | 40.0% | |
| GGAATGTTGCACCTTTCATA+TGG | + | chr6_3:77268510-77268529 | Msa0959790:CDS | 40.0% | |
| AGCAATAACCAAACTTCTGG+TGG | + | chr6_3:77268578-77268597 | Msa0959790:CDS | 40.0% | |
| TGCTTGAGAATCTGATTTCC+TGG | - | chr6_3:77268690-77268709 | None:intergenic | 40.0% | |
| ! | TCGTGGTCACTTTCTAATGA+AGG | - | chr6_3:77268836-77268855 | None:intergenic | 40.0% |
| TAGGGGCTTAGATGATCAAA+TGG | + | chr6_3:77269254-77269273 | Msa0959790:three_prime_UTR | 40.0% | |
| AGTGGGAGAGGAAGATTTAG+CGG | - | chr6_3:77262554-77262573 | None:intergenic | 45.0% | |
| TGTTGAAACGACCCAGATGA+GGG | - | chr6_3:77262866-77262885 | None:intergenic | 45.0% | |
| ATGTTGAAACGACCCAGATG+AGG | - | chr6_3:77262867-77262886 | None:intergenic | 45.0% | |
| GTTGTTGCTGCGGAATTTCT+TGG | + | chr6_3:77262966-77262985 | Msa0959790:CDS | 45.0% | |
| GGATCCTTAAACGACTTCGT+AGG | + | chr6_3:77262997-77263016 | Msa0959790:CDS | 45.0% | |
| ! | TTTGGGGTTGGGTTTCTTCA+GGG | + | chr6_3:77264075-77264094 | Msa0959790:intron | 45.0% |
| GGTTTCTTCAGGGTGTAGTT+TGG | + | chr6_3:77264085-77264104 | Msa0959790:intron | 45.0% | |
| ATGGTTGTATGCGATCCATC+AGG | - | chr6_3:77264249-77264268 | None:intergenic | 45.0% | |
| GATGCATCCTTTGAGCTGAA+TGG | - | chr6_3:77264268-77264287 | None:intergenic | 45.0% | |
| ACCAAGTAATTGGGCTCAAG+TGG | + | chr6_3:77264567-77264586 | Msa0959790:intron | 45.0% | |
| ACCACTTGAGCCCAATTACT+TGG | - | chr6_3:77264571-77264590 | None:intergenic | 45.0% | |
| CACCGAAAGACGAATTGTTC+AGG | + | chr6_3:77264601-77264620 | Msa0959790:intron | 45.0% | |
| AACTGAGTTCAATTCCTGGG+TGG | + | chr6_3:77264627-77264646 | Msa0959790:intron | 45.0% | |
| AGGATGCAAGCACGTCATAA+AGG | - | chr6_3:77264764-77264783 | None:intergenic | 45.0% | |
| ACCCGATCAAAGTGGAAAAC+AGG | + | chr6_3:77264941-77264960 | Msa0959790:CDS | 45.0% | |
| AGGACCTCTGTGATATACCA+TGG | + | chr6_3:77264961-77264980 | Msa0959790:CDS | 45.0% | |
| GCTTCCATGGTATATCACAG+AGG | - | chr6_3:77264968-77264987 | None:intergenic | 45.0% | |
| CTTGCAACTGCGAATACCAT+TGG | - | chr6_3:77265083-77265102 | None:intergenic | 45.0% | |
| ! | CAAAAACTGACGGACCTTTG+AGG | - | chr6_3:77265220-77265239 | None:intergenic | 45.0% |
| !! | TGATGGAGCATCGTCTGATA+TGG | - | chr6_3:77265409-77265428 | None:intergenic | 45.0% |
| ATCCGTGCAAGAGAGAATTC+AGG | + | chr6_3:77265587-77265606 | Msa0959790:CDS | 45.0% | |
| !! | GAGTTTGCTGGACCAAAATG+GGG | - | chr6_3:77265974-77265993 | None:intergenic | 45.0% |
| !! | GGAGTTTGCTGGACCAAAAT+GGG | - | chr6_3:77265975-77265994 | None:intergenic | 45.0% |
| !! | TGGAGTTTGCTGGACCAAAA+TGG | - | chr6_3:77265976-77265995 | None:intergenic | 45.0% |
| CACTAAACAGCGTCGTATAG+TGG | + | chr6_3:77266137-77266156 | Msa0959790:intron | 45.0% | |
| ATATGCGGGAGTTCTCATGT+TGG | - | chr6_3:77266321-77266340 | None:intergenic | 45.0% | |
| ATGAGAACTCCCGCATATGT+CGG | + | chr6_3:77266323-77266342 | Msa0959790:CDS | 45.0% | |
| ACCCTGTATCATTGGGATGA+GGG | + | chr6_3:77266385-77266404 | Msa0959790:CDS | 45.0% | |
| ACCCTCATCCCAATGATACA+GGG | - | chr6_3:77266389-77266408 | None:intergenic | 45.0% | |
| AACCCTCATCCCAATGATAC+AGG | - | chr6_3:77266390-77266409 | None:intergenic | 45.0% | |
| CATACCTCGCTCATTTCCAT+CGG | - | chr6_3:77266416-77266435 | None:intergenic | 45.0% | |
| !! | AGTTGGTGAGCTAGAGAAAG+AGG | + | chr6_3:77266499-77266518 | Msa0959790:CDS | 45.0% |
| ! | GTTGGTGAGCTAGAGAAAGA+GGG | + | chr6_3:77266500-77266519 | Msa0959790:CDS | 45.0% |
| TCGCAAGAGCCTAAAGAAGA+TGG | + | chr6_3:77266626-77266645 | Msa0959790:CDS | 45.0% | |
| AGCCTAAAGAAGATGGTGAC+TGG | + | chr6_3:77266633-77266652 | Msa0959790:CDS | 45.0% | |
| GAAGATGGTGACTGGAACAA+TGG | + | chr6_3:77266641-77266660 | Msa0959790:CDS | 45.0% | |
| CTCCCGTTAAAATGTAGGTG+AGG | + | chr6_3:77266739-77266758 | Msa0959790:intron | 45.0% | |
| !! | CTAGCACTTTTGGTGATAGC+AGG | + | chr6_3:77266963-77266982 | Msa0959790:intron | 45.0% |
| !! | AGCACTTTTGGTGATAGCAG+GGG | + | chr6_3:77266965-77266984 | Msa0959790:intron | 45.0% |
| ! | GGTGGTTCGAGAAGGAATTT+TGG | - | chr6_3:77266995-77267014 | None:intergenic | 45.0% |
| ATGCTATAGGTGGTTCGAGA+AGG | - | chr6_3:77267003-77267022 | None:intergenic | 45.0% | |
| ATATTTCTCGTGTGGGCAAG+TGG | + | chr6_3:77267140-77267159 | Msa0959790:intron | 45.0% | |
| TGTTGCCAAGCATGTTTCAC+AGG | + | chr6_3:77267304-77267323 | Msa0959790:CDS | 45.0% | |
| TGGTACCTGTGAAACATGCT+TGG | - | chr6_3:77267312-77267331 | None:intergenic | 45.0% | |
| !!! | ACTCCCTCCTTTTTTCCCAT+TGG | + | chr6_3:77267342-77267361 | Msa0959790:intron | 45.0% |
| GCAACCAATGGGAAAAAAGG+AGG | - | chr6_3:77267349-77267368 | None:intergenic | 45.0% | |
| GGGGGAAAAAAGCAACCAAT+GGG | - | chr6_3:77267360-77267379 | None:intergenic | 45.0% | |
| !!! | TTATTTTTTGGGGGAAGGGG+TGG | - | chr6_3:77267488-77267507 | None:intergenic | 45.0% |
| ATAAGGGTAGCATCCCTAAG+AGG | + | chr6_3:77267745-77267764 | Msa0959790:CDS | 45.0% | |
| TAAGGGTAGCATCCCTAAGA+GGG | + | chr6_3:77267746-77267765 | Msa0959790:CDS | 45.0% | |
| AAAACGCAGTGTCCCTCTTA+GGG | - | chr6_3:77267761-77267780 | None:intergenic | 45.0% | |
| AAAAACGCAGTGTCCCTCTT+AGG | - | chr6_3:77267762-77267781 | None:intergenic | 45.0% | |
| GAACAAAGCAATGCGCGTAT+TGG | - | chr6_3:77267884-77267903 | None:intergenic | 45.0% | |
| ! | CTCCCAAATAGTGAAAGCGT+AGG | + | chr6_3:77268446-77268465 | Msa0959790:CDS | 45.0% |
| ! | ATGAAAGGTGCAACATTCCG+AGG | - | chr6_3:77268509-77268528 | None:intergenic | 45.0% |
| CTTTCACTCCACCAGAAGTT+TGG | - | chr6_3:77268589-77268608 | None:intergenic | 45.0% | |
| AAAGCTAGTGCAAAGACCTC+AGG | + | chr6_3:77268605-77268624 | Msa0959790:CDS | 45.0% | |
| TGAGAATCTGATTTCCTGGC+TGG | - | chr6_3:77268686-77268705 | None:intergenic | 45.0% | |
| TCCATCACTGCACTATTCGA+AGG | - | chr6_3:77268902-77268921 | None:intergenic | 45.0% | |
| !! | CGAATAGTGCAGTGATGGAT+AGG | + | chr6_3:77268903-77268922 | Msa0959790:CDS | 45.0% |
| GTCAATCAGTTCGACCAGTT+CGG | + | chr6_3:77268925-77268944 | Msa0959790:CDS | 45.0% | |
| !! | AAAAATTAATAAATACTAAT+GGG | - | chr6_3:77263223-77263242 | None:intergenic | 5.0% |
| !! | TAAAAATTAATAAATACTAA+TGG | - | chr6_3:77263224-77263243 | None:intergenic | 5.0% |
| !!! | TTTTTTACTATTTTATAATT+TGG | + | chr6_3:77263363-77263382 | Msa0959790:intron | 5.0% |
| !!! | TGTTTATTTATTTATTTTTT+GGG | - | chr6_3:77267499-77267518 | None:intergenic | 5.0% |
| AGTCGGATCACTAGAGGTAG+AGG | + | chr6_3:77263735-77263754 | Msa0959790:intron | 50.0% | |
| ATGTAGCCGCTCCACTTAGT+GGG | + | chr6_3:77263862-77263881 | Msa0959790:intron | 50.0% | |
| CCTTATCCCACTAAGTGGAG+CGG | - | chr6_3:77263871-77263890 | None:intergenic | 50.0% | |
| CGCTCCACTTAGTGGGATAA+GGG | + | chr6_3:77263869-77263888 | Msa0959790:intron | 50.0% | |
| CCAACCCTTATCCCACTAAG+TGG | - | chr6_3:77263876-77263895 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGGT+TGG | + | chr6_3:77263873-77263892 | Msa0959790:intron | 50.0% | |
| ! | ATTGGGTTTGGGTTTGGGGT+TGG | + | chr6_3:77264063-77264082 | Msa0959790:intron | 50.0% |
| ! | TTGGGTTTGGGTTTGGGGTT+GGG | + | chr6_3:77264064-77264083 | Msa0959790:intron | 50.0% |
| ! | GTTTGGGGTTGGGTTTCTTC+AGG | + | chr6_3:77264074-77264093 | Msa0959790:intron | 50.0% |
| CTTGTTCTCACTGAGCCTGA+TGG | + | chr6_3:77264231-77264250 | Msa0959790:CDS | 50.0% | |
| ACGATGTGATTGTTCCACCC+AGG | - | chr6_3:77264644-77264663 | None:intergenic | 50.0% | |
| TGAGACTTCGTCGGAGAAAG+AGG | + | chr6_3:77265008-77265027 | Msa0959790:CDS | 50.0% | |
| ! | GGAGAAAGAGGCATGGTGTA+AGG | + | chr6_3:77265020-77265039 | Msa0959790:CDS | 50.0% |
| ATCACATGAGGCCAAACGGA+GGG | - | chr6_3:77265046-77265065 | None:intergenic | 50.0% | |
| GAAAGGGCTACTAAGACGGA+TGG | + | chr6_3:77265189-77265208 | Msa0959790:CDS | 50.0% | |
| GACGGATGGATCTTCCTCAA+AGG | + | chr6_3:77265203-77265222 | Msa0959790:CDS | 50.0% | |
| ACGAGAAGATCTTCCCGAGT+TGG | + | chr6_3:77265249-77265268 | Msa0959790:CDS | 50.0% | |
| ! | AAGATCTTCCCGAGTTGGCT+TGG | + | chr6_3:77265254-77265273 | Msa0959790:CDS | 50.0% |
| TCATCATCCCTGTCTCGTTC+AGG | + | chr6_3:77265435-77265454 | Msa0959790:CDS | 50.0% | |
| TTGGCTTCCTGAACGAGACA+GGG | - | chr6_3:77265445-77265464 | None:intergenic | 50.0% | |
| ! | TTTGGCTTCCTGAACGAGAC+AGG | - | chr6_3:77265446-77265465 | None:intergenic | 50.0% |
| !!! | ACTACTGGCTTGCCCCATTT+TGG | + | chr6_3:77265959-77265978 | Msa0959790:intron | 50.0% |
| GCGTTGTCAATTGCGGATCA+CGG | + | chr6_3:77266040-77266059 | Msa0959790:intron | 50.0% | |
| ACGACATCACCGACATATGC+GGG | - | chr6_3:77266335-77266354 | None:intergenic | 50.0% | |
| GACGACATCACCGACATATG+CGG | - | chr6_3:77266336-77266355 | None:intergenic | 50.0% | |
| CTCATCCCAATGATACAGGG+TGG | - | chr6_3:77266386-77266405 | None:intergenic | 50.0% | |
| CACCCTGTATCATTGGGATG+AGG | + | chr6_3:77266384-77266403 | Msa0959790:CDS | 50.0% | |
| TCTTCCGATGGAAATGAGCG+AGG | + | chr6_3:77266409-77266428 | Msa0959790:CDS | 50.0% | |
| AATGAGCGAGGTATGTGCCT+TGG | + | chr6_3:77266421-77266440 | Msa0959790:CDS | 50.0% | |
| GGGGGGAAAAAAGCAACCAA+TGG | - | chr6_3:77267361-77267380 | None:intergenic | 50.0% | |
| ACCATACCACAGTTGATCGG+CGG | - | chr6_3:77267800-77267819 | None:intergenic | 50.0% | |
| CTCTTCTGCAGGCAGCAATT+CGG | + | chr6_3:77268411-77268430 | Msa0959790:intron | 50.0% | |
| TCTTCTGCAGGCAGCAATTC+GGG | + | chr6_3:77268412-77268431 | Msa0959790:intron | 50.0% | |
| ! | GTGAAAGCGTAGGCATTCGA+TGG | + | chr6_3:77268456-77268475 | Msa0959790:CDS | 50.0% |
| AGGCATTCGATGGATGCTAG+CGG | + | chr6_3:77268466-77268485 | Msa0959790:CDS | 50.0% | |
| AATCGAGACAAGATCCAGCC+AGG | + | chr6_3:77268669-77268688 | Msa0959790:CDS | 50.0% | |
| ! | TCTTCTCTTCGCTAGCTTCG+TGG | - | chr6_3:77268853-77268872 | None:intergenic | 50.0% |
| CGAAGCTAGCGAAGAGAAGA+CGG | + | chr6_3:77268853-77268872 | Msa0959790:CDS | 50.0% | |
| GCCTTCGAATAGTGCAGTGA+TGG | + | chr6_3:77268898-77268917 | Msa0959790:CDS | 50.0% | |
| ATCATCCTGTTGAGCCGAAC+TGG | - | chr6_3:77268942-77268961 | None:intergenic | 50.0% | |
| CACTAAGTGGAGCGGCTACA+TGG | - | chr6_3:77263863-77263882 | None:intergenic | 55.0% | |
| CATGTAGCCGCTCCACTTAG+TGG | + | chr6_3:77263861-77263880 | Msa0959790:intron | 55.0% | |
| CCGCTCCACTTAGTGGGATA+AGG | + | chr6_3:77263868-77263887 | Msa0959790:intron | 55.0% | |
| CTTCGTCGGAGAAAGAGGCA+TGG | + | chr6_3:77265013-77265032 | Msa0959790:CDS | 55.0% | |
| ATGGTGTAAGGCCCTCCGTT+TGG | + | chr6_3:77265032-77265051 | Msa0959790:CDS | 55.0% | |
| CATCACATGAGGCCAAACGG+AGG | - | chr6_3:77265047-77265066 | None:intergenic | 55.0% | |
| TGGGATGAGGGTTCTTCCGA+TGG | + | chr6_3:77266397-77266416 | Msa0959790:CDS | 55.0% | |
| AATGCACCTTCCTCGACTCC+TGG | + | chr6_3:77267254-77267273 | Msa0959790:CDS | 55.0% | |
| CTTGATCCAGGAGTCGAGGA+AGG | - | chr6_3:77267263-77267282 | None:intergenic | 55.0% | |
| CCATCTTGATCCAGGAGTCG+AGG | - | chr6_3:77267267-77267286 | None:intergenic | 55.0% | |
| CCTCGACTCCTGGATCAAGA+TGG | + | chr6_3:77267264-77267283 | Msa0959790:CDS | 55.0% | |
| CCATACCACAGTTGATCGGC+GGG | - | chr6_3:77267799-77267818 | None:intergenic | 55.0% | |
| ! | GTTCCTGATCAACCGGCTCA+AGG | + | chr6_3:77267900-77267919 | Msa0959790:CDS | 55.0% |
| GTACCTTGAGCCGGTTGATC+AGG | - | chr6_3:77267906-77267925 | None:intergenic | 55.0% | |
| !! | CGGTTCTGGACTATCACCTG+AGG | - | chr6_3:77268624-77268643 | None:intergenic | 55.0% |
| TTCGACCAGTTCGGCTCAAC+AGG | + | chr6_3:77268934-77268953 | Msa0959790:CDS | 55.0% | |
| GAGCGAGGTATGTGCCTTGG+AGG | + | chr6_3:77266424-77266443 | Msa0959790:CDS | 60.0% | |
| TACCACAGTTGATCGGCGGG+TGG | - | chr6_3:77267796-77267815 | None:intergenic | 60.0% | |
| CCCGCCGATCAACTGTGGTA+TGG | + | chr6_3:77267796-77267815 | Msa0959790:CDS | 60.0% | |
| CACAGTTGATCGGCGGGTGG+CGG | - | chr6_3:77267793-77267812 | None:intergenic | 65.0% | |
| CGCCACCCGCCGATCAACTG+TGG | + | chr6_3:77267791-77267810 | Msa0959790:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 77262533 | 77269542 | 77262533 | ID=Msa0959790;Name=Msa0959790 |
| chr6_3 | mRNA | 77262533 | 77269542 | 77262533 | ID=Msa0959790-mRNA-1;Parent=Msa0959790;Name=Msa0959790-mRNA-1;_AED=0.03;_eAED=0.03;_QI=379|1|1|1|0.83|0.85|7|470|806 |
| chr6_3 | exon | 77262533 | 77263124 | 77262533 | ID=Msa0959790-mRNA-1:exon:13842;Parent=Msa0959790-mRNA-1 |
| chr6_3 | exon | 77264096 | 77264328 | 77264096 | ID=Msa0959790-mRNA-1:exon:13843;Parent=Msa0959790-mRNA-1 |
| chr6_3 | exon | 77264930 | 77265608 | 77264930 | ID=Msa0959790-mRNA-1:exon:13844;Parent=Msa0959790-mRNA-1 |
| chr6_3 | exon | 77266308 | 77266662 | 77266308 | ID=Msa0959790-mRNA-1:exon:13845;Parent=Msa0959790-mRNA-1 |
| chr6_3 | exon | 77267231 | 77267325 | 77267231 | ID=Msa0959790-mRNA-1:exon:13846;Parent=Msa0959790-mRNA-1 |
| chr6_3 | exon | 77267727 | 77267921 | 77267727 | ID=Msa0959790-mRNA-1:exon:13847;Parent=Msa0959790-mRNA-1 |
| chr6_3 | exon | 77268422 | 77269542 | 77268422 | ID=Msa0959790-mRNA-1:exon:13848;Parent=Msa0959790-mRNA-1 |
| chr6_3 | five_prime_UTR | 77262533 | 77262911 | 77262533 | ID=Msa0959790-mRNA-1:five_prime_utr;Parent=Msa0959790-mRNA-1 |
| chr6_3 | CDS | 77262912 | 77263124 | 77262912 | ID=Msa0959790-mRNA-1:cds;Parent=Msa0959790-mRNA-1 |
| chr6_3 | CDS | 77264096 | 77264328 | 77264096 | ID=Msa0959790-mRNA-1:cds;Parent=Msa0959790-mRNA-1 |
| chr6_3 | CDS | 77264930 | 77265608 | 77264930 | ID=Msa0959790-mRNA-1:cds;Parent=Msa0959790-mRNA-1 |
| chr6_3 | CDS | 77266308 | 77266662 | 77266308 | ID=Msa0959790-mRNA-1:cds;Parent=Msa0959790-mRNA-1 |
| chr6_3 | CDS | 77267231 | 77267325 | 77267231 | ID=Msa0959790-mRNA-1:cds;Parent=Msa0959790-mRNA-1 |
| chr6_3 | CDS | 77267727 | 77267921 | 77267727 | ID=Msa0959790-mRNA-1:cds;Parent=Msa0959790-mRNA-1 |
| chr6_3 | CDS | 77268422 | 77269072 | 77268422 | ID=Msa0959790-mRNA-1:cds;Parent=Msa0959790-mRNA-1 |
| chr6_3 | three_prime_UTR | 77269073 | 77269542 | 77269073 | ID=Msa0959790-mRNA-1:three_prime_utr;Parent=Msa0959790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
