AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0206600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0206600 MtrunA17_Chr2g0305051 93.624 596 17 2 1 578 1 593 0.0 1146
Msa0206600 MtrunA17_Chr4g0017231 59.545 220 89 0 66 285 78 297 4.17e-87 272
Msa0206600 MtrunA17_Chr4g0057771 37.333 225 124 5 69 280 23 243 1.03e-39 145
Msa0206600 MtrunA17_Chr7g0263541 34.031 191 105 4 82 254 43 230 6.94e-27 110
Msa0206600 MtrunA17_Chr1g0181801 32.984 191 107 4 82 254 118 305 2.62e-24 104
Msa0206600 MtrunA17_Chr8g0337051 30.233 215 106 8 75 279 21 201 1.72e-22 95.9
Msa0206600 MtrunA17_Chr4g0018221 24.215 223 139 5 65 284 44 239 8.06e-18 83.2
Msa0206600 MtrunA17_Chr5g0428971 23.810 231 146 5 57 284 13 216 4.19e-17 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0206600 AT5G35170.1 69.508 528 131 2 68 577 72 587 0.0 777
Msa0206600 AT5G35170.2 69.674 521 128 2 68 570 72 580 0.0 769
Msa0206600 AT5G47840.1 64.545 220 78 0 66 285 55 274 2.95e-93 288
Msa0206600 AT5G47840.2 61.818 220 70 1 66 285 55 260 1.75e-86 270
Msa0206600 AT5G63400.1 35.586 222 132 5 68 279 26 246 3.47e-36 135
Msa0206600 AT5G50370.1 36.893 206 115 5 68 262 27 228 7.28e-35 132
Msa0206600 AT5G50370.2 38.144 194 105 5 68 250 27 216 6.05e-34 129
Msa0206600 AT5G63400.2 41.290 155 86 2 68 218 26 179 5.03e-32 122
Msa0206600 AT2G37250.1 34.555 191 104 4 82 254 58 245 1.43e-28 115
Msa0206600 AT2G39270.1 33.333 189 109 3 82 254 71 258 9.33e-26 107
Msa0206600 AT5G26667.3 28.037 214 124 4 69 279 8 194 1.31e-24 102
Msa0206600 AT5G26667.2 28.037 214 124 4 69 279 8 194 1.31e-24 102
Msa0206600 AT5G26667.4 28.037 214 124 4 69 279 8 194 1.31e-24 102
Msa0206600 AT5G26667.1 28.037 214 124 4 69 279 8 194 1.68e-24 102
Msa0206600 AT4G25280.1 36.508 126 77 2 75 199 53 176 2.13e-21 94.4
Msa0206600 AT4G25280.2 36.508 126 77 2 75 199 53 176 2.13e-21 94.4
Msa0206600 AT3G60180.1 28.846 208 112 5 78 279 24 201 8.38e-21 91.3
Msa0206600 AT3G60180.2 28.846 208 112 5 78 279 24 201 8.38e-21 91.3

Find 137 sgRNAs with CRISPR-Local

Find 524 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGAATTGATTGTTAATA+AGG 0.168841 2_1:+35996250 Msa0206600:CDS
CCAAAACCCTGATGATTTCT+TGG 0.171604 2_1:-36003634 None:intergenic
TCATCCACAGTAGGCCTTTC+AGG 0.186304 2_1:-36003481 None:intergenic
GACAATTTGCCAAGTGATTA+TGG 0.208115 2_1:+36003843 Msa0206600:three_prime_UTR
TAACGAACCTTGGGTCTTAA+TGG 0.220622 2_1:-35996055 None:intergenic
ACCGATTCCTGGTATGAAAA+AGG 0.220747 2_1:+36000470 Msa0206600:CDS
TTAGCTTGTTACAGGATAAA+TGG 0.229969 2_1:+36000618 Msa0206600:intron
CCAAGAAATCATCAGGGTTT+TGG 0.251589 2_1:+36003634 Msa0206600:CDS
GTTGGATATACAGGATTTAA+AGG 0.272534 2_1:+36002461 Msa0206600:intron
TGATAGATCTTGCCAGTTAC+TGG 0.281302 2_1:-35999229 None:intergenic
TGCGAAGATGTTAAGCAAAA+AGG 0.292697 2_1:+35998445 Msa0206600:CDS
TCTTTGAAAACTTCTTCTTT+TGG 0.295160 2_1:-36000039 None:intergenic
CTTGGGTCTTAATGGCAAAT+TGG 0.299518 2_1:-35996047 None:intergenic
TTCATGGATTGGGGTGATTA+TGG 0.315840 2_1:+36001681 Msa0206600:CDS
GTAGCAGCTGGAACAGAAAT+AGG 0.320053 2_1:+35998234 Msa0206600:CDS
TTAGCATTGATTAGGATAAC+TGG 0.329268 2_1:-36002510 None:intergenic
GCAAGATGACATGTATTTCT+TGG 0.330998 2_1:+36002255 Msa0206600:CDS
TTACTCAAACATAACAAATA+AGG 0.331154 2_1:+35999912 Msa0206600:CDS
ACCATTTCTGGATTCAGTTC+AGG 0.335973 2_1:-36001304 None:intergenic
CCTTAAGCTTAGCATTGATT+AGG 0.344833 2_1:-36002518 None:intergenic
CCTAATCAATGCTAAGCTTA+AGG 0.348240 2_1:+36002518 Msa0206600:CDS
ATGGGAGAAGGTGCTCTTGC+TGG 0.349850 2_1:+36001618 Msa0206600:CDS
ATTTCCTCATTTCTCGAGAA+TGG 0.354960 2_1:-36000673 None:intergenic
TTTATACTAGTATATATGTT+AGG 0.355241 2_1:-36004082 None:intergenic
ATTTGTTATGTTTGAGTAAG+AGG 0.360822 2_1:-35999908 None:intergenic
ATACAGGATGTTTATCGAAT+TGG 0.361361 2_1:+36001390 Msa0206600:intron
TTGGCATATTTACAGATTGA+TGG 0.365193 2_1:+36000009 Msa0206600:intron
GAAATTAATGATTCCTTTGA+AGG 0.373785 2_1:+36003502 Msa0206600:CDS
GTCCTGCAGGTTTGTGTACA+GGG 0.375768 2_1:+36001591 Msa0206600:intron
CCAAGTGATTATGGTAAAAT+CGG 0.379482 2_1:+36003852 Msa0206600:three_prime_UTR
GGATTAGTGCACATATCAAC+TGG 0.382470 2_1:+35998192 Msa0206600:CDS
TGTCCTGCAGGTTTGTGTAC+AGG 0.384124 2_1:+36001590 Msa0206600:intron
GCACTTTCATTTGCCAATGA+TGG 0.388368 2_1:+36001441 Msa0206600:CDS
AATGAAACCAAGAAATCATC+AGG 0.390578 2_1:+36003627 Msa0206600:CDS
AGAGTGAAAATAGTGAAATC+TGG 0.391130 2_1:+36000096 Msa0206600:CDS
TTTCCTCATTTCTCGAGAAT+GGG 0.392958 2_1:-36000672 None:intergenic
TGAGGGGATGTAGGAGGAAG+AGG 0.397951 2_1:-35995900 None:intergenic
TCGACAGATGCGTTGGTAGA+AGG 0.400517 2_1:+35999200 Msa0206600:CDS
CGACTTCCAGCAAGCTGTAA+TGG 0.401505 2_1:-36001645 None:intergenic
CCATTGAAGGTGATGATATC+AGG 0.404203 2_1:+35996200 Msa0206600:CDS
AAGAGTTCTTGAGGGGATGT+AGG 0.407056 2_1:-35995909 None:intergenic
GGAATGCCATTACAGCTTGC+TGG 0.407333 2_1:+36001639 Msa0206600:CDS
CTTCTTAATCACTAGACAAT+GGG 0.416346 2_1:+36003009 Msa0206600:intron
ATATCAGGTGCACCTGCATC+TGG 0.416894 2_1:+35996215 Msa0206600:CDS
GTAGTGTGTTAGAACTTAGA+AGG 0.422064 2_1:-36004111 None:intergenic
CGGAGTTTGTAGTGCAACTT+GGG 0.436500 2_1:+36003872 Msa0206600:three_prime_UTR
GCTTTGATTTCTTCTGTCTC+CGG 0.438837 2_1:-35999268 None:intergenic
GGAATGTTATTTAGTCTAGT+AGG 0.438922 2_1:-36000650 None:intergenic
TCGGAGTTTGTAGTGCAACT+TGG 0.441725 2_1:+36003871 Msa0206600:three_prime_UTR
TGAGGAAGAAGAGTTCTTGA+GGG 0.446159 2_1:-35995917 None:intergenic
AACAAGGAGAAATTATCAAC+TGG 0.452608 2_1:-36004058 None:intergenic
TTCCACAAGCGAGCCATTGA+AGG 0.453810 2_1:+35996187 Msa0206600:CDS
GATGTAGGAGGAAGAGGGTG+TGG 0.457226 2_1:-35995894 None:intergenic
GGTTTGTGTACAGGGGTCAA+TGG 0.457274 2_1:+36001599 Msa0206600:intron
TTTCTCTAGACTTTCAGCTT+GGG 0.458159 2_1:-35998500 None:intergenic
AACTGTATTGATAAATATTG+TGG 0.459124 2_1:+36003983 Msa0206600:three_prime_UTR
TCCTGAACTGAATCCAGAAA+TGG 0.460854 2_1:+36001303 Msa0206600:CDS
AGAAGGTTAGATCCAGTAAC+TGG 0.461130 2_1:+35999217 Msa0206600:CDS
TGAGTTCCCTTGCCAGATGC+AGG 0.462999 2_1:-35996227 None:intergenic
CCTGATATCATCACCTTCAA+TGG 0.464859 2_1:-35996200 None:intergenic
ATGAGCCACATTGCTCTCAA+TGG 0.464885 2_1:-35995846 None:intergenic
GAAGAAAATAAAAGAGAATG+AGG 0.471223 2_1:-35995935 None:intergenic
TTGGTTGCTTGGCTTTAATG+TGG 0.477788 2_1:+35995795 None:intergenic
TGGGGTGATTATGGTGCAAA+AGG 0.479166 2_1:+36001690 Msa0206600:CDS
TGGTTGCTTGGCTTTAATGT+GGG 0.480282 2_1:+35995796 None:intergenic
TAGGATAACTGGTCTGTGTT+CGG 0.482799 2_1:-36002499 None:intergenic
ATGAGGAAGAAGAGTTCTTG+AGG 0.491766 2_1:-35995918 None:intergenic
TTATCGAATTGGTACACTGT+TGG 0.491969 2_1:+36001401 Msa0206600:CDS
CACCTTCAATGGCTCGCTTG+TGG 0.492590 2_1:-35996189 None:intergenic
GTTTGTGTACAGGGGTCAAT+GGG 0.495441 2_1:+36001600 Msa0206600:CDS
CTAAGAGCAGAAGTAGCAGC+TGG 0.501347 2_1:+35998222 Msa0206600:CDS
GTTCATGAATGCTGGTCGCT+TGG 0.503110 2_1:+35998272 Msa0206600:CDS
ACACAGAGGGCCATCAATGA+TGG 0.507793 2_1:+36000722 Msa0206600:CDS
GTGGCTCCTCAAAATGCTGT+AGG 0.509632 2_1:+36002277 Msa0206600:CDS
GAGGGGATGTAGGAGGAAGA+GGG 0.512281 2_1:-35995899 None:intergenic
GCAAAAGAGTTCATGAATGC+TGG 0.520094 2_1:+35998264 Msa0206600:CDS
AGTTCTTGAGGGGATGTAGG+AGG 0.522440 2_1:-35995906 None:intergenic
GAGAGTTAAAGTTGTGGTGT+TGG 0.523292 2_1:-35995991 None:intergenic
ACAGCTGTCACAATTTCATC+AGG 0.523953 2_1:-35998297 None:intergenic
CAAAAGAGTAGAAGAGTCGC+CGG 0.526347 2_1:+36003426 Msa0206600:CDS
CAATGATGGAAAACGTGTAA+AGG 0.528261 2_1:+36001455 Msa0206600:CDS
ACTGTATTGATAAATATTGT+GGG 0.530780 2_1:+36003984 Msa0206600:three_prime_UTR
GGGGCAAGCATCTTTGATCC+AGG 0.537524 2_1:+36000491 Msa0206600:CDS
CACAGTAGGCCTTTCAGGAA+AGG 0.539847 2_1:-36003476 None:intergenic
AGGTGCACCTGCATCTGGCA+AGG 0.542456 2_1:+35996220 Msa0206600:CDS
AAAGGAACCTTCATCAACAT+TGG 0.543502 2_1:+36001708 Msa0206600:CDS
TGGTCTGTGTTCGGCAGCAG+TGG 0.545359 2_1:-36002490 None:intergenic
ATCTTGAGAATTTCAGAAGA+GGG 0.547915 2_1:+36003938 Msa0206600:three_prime_UTR
TTGTGCAGGGGCTCGTTGAG+TGG 0.548227 2_1:+36003755 Msa0206600:intron
TCATTAATTTCATCCACAGT+AGG 0.548790 2_1:-36003490 None:intergenic
CAATTTGCCATTAAGACCCA+AGG 0.551534 2_1:+35996048 Msa0206600:CDS
TCTAATACGATATACACATC+AGG 0.552254 2_1:-35998535 None:intergenic
TATGGAACCAATGTTGATGA+AGG 0.558497 2_1:-36001715 None:intergenic
GGTGTGCAACATTGTTGCTA+CGG 0.558759 2_1:-35995873 None:intergenic
ATTGGCATGTCTGCTGAAGT+TGG 0.561911 2_1:-35996029 None:intergenic
GAGGAAGAAGAGTTCTTGAG+GGG 0.562077 2_1:-35995916 None:intergenic
TCCTGCAGGTTTGTGTACAG+GGG 0.564656 2_1:+36001592 Msa0206600:intron
TTCATCAACATTGGTTCCAT+AGG 0.570069 2_1:+36001717 Msa0206600:CDS
TTGTACAGCTCATAACGGTA+TGG 0.572011 2_1:-36003406 None:intergenic
AAAAGAGTAGAAGAGTCGCC+GGG 0.572875 2_1:+36003427 Msa0206600:CDS
TTCCCCATTCTCGAGAAATG+AGG 0.574307 2_1:+36000669 Msa0206600:CDS
TTCCTCATTTCTCGAGAATG+GGG 0.575872 2_1:-36000671 None:intergenic
TGCATAATACCACTAGAAGC+AGG 0.583506 2_1:-36002918 None:intergenic
CAGGATTTACCTGCTTCTAG+TGG 0.583806 2_1:+36002909 Msa0206600:intron
GTTTGTAGTGCAACTTGGGG+TGG 0.588002 2_1:+36003876 Msa0206600:three_prime_UTR
TGGCTCCTCAAAATGCTGTA+GGG 0.588324 2_1:+36002278 Msa0206600:CDS
TTGATTTCTTCTGTCTCCGG+CGG 0.588642 2_1:-35999265 None:intergenic
ATTCTGATCGACAGATGCGT+TGG 0.589630 2_1:+35999193 Msa0206600:CDS
AGTATATATGTTAGGTAACA+AGG 0.592433 2_1:-36004074 None:intergenic
GATCTTGAGAATTTCAGAAG+AGG 0.596054 2_1:+36003937 Msa0206600:three_prime_UTR
AGATGACATGTATTTCTTGG+TGG 0.597196 2_1:+36002258 Msa0206600:CDS
GTGTGCAACATTGTTGCTAC+GGG 0.598580 2_1:-35995872 None:intergenic
TCTAATGTCAGGTGCAGCGG+AGG 0.603916 2_1:+36002225 Msa0206600:intron
GGTGCACCTGCATCTGGCAA+GGG 0.604640 2_1:+35996221 Msa0206600:CDS
TTGAGAATTTCAGAAGAGGG+TGG 0.606985 2_1:+36003941 Msa0206600:three_prime_UTR
ATTTGTAGATGGTGGCAGCA+CGG 0.610921 2_1:+35998416 Msa0206600:intron
AGTAGGCCTTTCAGGAAAGG+TGG 0.614616 2_1:-36003473 None:intergenic
ATTTCTAATGTCAGGTGCAG+CGG 0.616726 2_1:+36002222 Msa0206600:intron
CTTTCCTGAAAGGCCTACTG+TGG 0.619841 2_1:+36003477 Msa0206600:CDS
GTACAGGGGTCAATGGGAGA+AGG 0.638754 2_1:+36001606 Msa0206600:CDS
GATTAGTGCACATATCAACT+GGG 0.641321 2_1:+35998193 Msa0206600:CDS
GTGAAAATAGTGAAATCTGG+AGG 0.645858 2_1:+36000099 Msa0206600:CDS
AGACAGAAGAAATCAAAGCA+AGG 0.664626 2_1:+35999272 Msa0206600:CDS
TTGTTACAGGATAAATGGAG+AGG 0.665409 2_1:+36000623 Msa0206600:intron
AATATAACTAGTATCATGTG+AGG 0.665527 2_1:-36004007 None:intergenic
CAGCTTGGGATAAACTACGA+GGG 0.665535 2_1:-35998486 None:intergenic
ATGAAACCAAGAAATCATCA+GGG 0.678260 2_1:+36003628 Msa0206600:CDS
GATATTGAGAGTTAAAGTTG+TGG 0.689051 2_1:-35995997 None:intergenic
TGGTGTTGGAGAAGTAGACA+TGG 0.690792 2_1:-35995977 None:intergenic
ATTCCTTTGAAGGAAAACCA+AGG 0.692720 2_1:+36003512 Msa0206600:CDS
GGAGTTTGTAGTGCAACTTG+GGG 0.696352 2_1:+36003873 Msa0206600:three_prime_UTR
TTCTTAATCACTAGACAATG+GGG 0.702647 2_1:+36003010 Msa0206600:intron
TGTGCTACTAGCTACACAGA+GGG 0.720328 2_1:+36000709 Msa0206600:CDS
AAAATCCATTGAGAGCAATG+TGG 0.729901 2_1:+35995841 Msa0206600:five_prime_UTR
ATTAGTGCACATATCAACTG+GGG 0.754100 2_1:+35998194 Msa0206600:CDS
TCAGCTTGGGATAAACTACG+AGG 0.765007 2_1:-35998487 None:intergenic
ATGTGCTACTAGCTACACAG+AGG 0.775103 2_1:+36000708 Msa0206600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATTA+GGG - chr2_1:36002023-36002042 None:intergenic 0.0%
!! TATATATATATATATATATT+AGG - chr2_1:36002024-36002043 None:intergenic 0.0%
!!! AAACATAGTTAATATATTTT+TGG - chr2_1:35997520-35997539 None:intergenic 10.0%
!!! AATTAACATTTTACTTATAT+GGG + chr2_1:36001929-36001948 Msa0206600:intron 10.0%
!!! ACTTATTATTCTTTTTGATA+AGG + chr2_1:35996142-35996161 Msa0206600:intron 15.0%
!!! AATGATATTAATGGATAATT+GGG - chr2_1:35997338-35997357 None:intergenic 15.0%
!! ATATAAGTTGTTCATTAATT+AGG + chr2_1:35997632-35997651 Msa0206600:intron 15.0%
!!! CATTGTAAAATAACTATTTT+TGG + chr2_1:35997910-35997929 Msa0206600:intron 15.0%
!! AAAAAGAAAAAGAAAACAAA+CGG - chr2_1:35998395-35998414 None:intergenic 15.0%
!!! ATTAGAAAATTTTAGTAACT+TGG - chr2_1:35999155-35999174 None:intergenic 15.0%
!!! ACTAAAATTTTCTAATATTC+AGG + chr2_1:35999159-35999178 Msa0206600:intron 15.0%
!! AAATAGATGGATAAAATAAA+AGG - chr2_1:36001873-36001892 None:intergenic 15.0%
!!! CAATTAACATTTTACTTATA+TGG + chr2_1:36001928-36001947 Msa0206600:intron 15.0%
!!! CAATTCTTTTTTCTATTTAT+AGG - chr2_1:36002055-36002074 None:intergenic 15.0%
!!! ATTAGTTTTGTATATTACAT+TGG - chr2_1:36002874-36002893 None:intergenic 15.0%
!! AAAAAACTAATAATAGATTG+AGG - chr2_1:36003674-36003693 None:intergenic 15.0%
!! TTCAGAAAATTTAATACTAA+AGG - chr2_1:36003703-36003722 None:intergenic 15.0%
!! TTTATACTAGTATATATGTT+AGG - chr2_1:36004085-36004104 None:intergenic 15.0%
!!! TTTTGATTTTTGTTTACTGA+TGG + chr2_1:35996101-35996120 Msa0206600:intron 20.0%
!! ATGTGAATTGATTGTTAATA+AGG + chr2_1:35996250-35996269 Msa0206600:CDS 20.0%
!!! AATACTCATTTTATAAGTGA+GGG - chr2_1:35996341-35996360 None:intergenic 20.0%
!!! AAATACTCATTTTATAAGTG+AGG - chr2_1:35996342-35996361 None:intergenic 20.0%
!! TTAAAGATGTATAGATGTAT+AGG + chr2_1:35996399-35996418 Msa0206600:intron 20.0%
!! ACCTATCAATTACAAAATTT+CGG + chr2_1:35996628-35996647 Msa0206600:intron 20.0%
!! TATGTGTTCAATATTAATCA+TGG + chr2_1:35997021-35997040 Msa0206600:intron 20.0%
!!! GAATGATATTAATGGATAAT+TGG - chr2_1:35997339-35997358 None:intergenic 20.0%
!!! TTCTAAAGGAATGATATTAA+TGG - chr2_1:35997347-35997366 None:intergenic 20.0%
!! AGAATATAAAACATTCCATT+TGG - chr2_1:35997580-35997599 None:intergenic 20.0%
!! ATGAAAAATAATGACACAAA+GGG - chr2_1:35997842-35997861 None:intergenic 20.0%
!! AATGAAAAATAATGACACAA+AGG - chr2_1:35997843-35997862 None:intergenic 20.0%
!! TTGTCGTTAAATAGAATAAA+AGG + chr2_1:35997939-35997958 Msa0206600:intron 20.0%
!!! TTTTCTTTTTCATTTGTAGA+TGG + chr2_1:35998405-35998424 Msa0206600:intron 20.0%
!!! AAATTTAGCATAAGATGTTT+TGG - chr2_1:35998680-35998699 None:intergenic 20.0%
!! TTCGTTAAATTAAGTGAAAT+AGG - chr2_1:35998786-35998805 None:intergenic 20.0%
!!! GTACTTATTTAATCATTTTC+AGG + chr2_1:35999837-35999856 Msa0206600:intron 20.0%
!!! CATTTTGCTTATAGATATTT+AGG - chr2_1:35999873-35999892 None:intergenic 20.0%
!! TTACTCAAACATAACAAATA+AGG + chr2_1:35999912-35999931 Msa0206600:CDS 20.0%
!!! TAATTTTCTGAAAGTAATAC+TGG - chr2_1:36000922-36000941 None:intergenic 20.0%
!! AAAACTATAACTTATAACTG+AGG + chr2_1:36001139-36001158 Msa0206600:intron 20.0%
!!! GTTTTCATTCCAAATATAAT+AGG + chr2_1:36001267-36001286 Msa0206600:intron 20.0%
!!! AACCATATATTTTTGTATAC+AGG + chr2_1:36001374-36001393 Msa0206600:intron 20.0%
!! ATCCTGTATACAAAAATATA+TGG - chr2_1:36001379-36001398 None:intergenic 20.0%
!! TTCTTTATGTAGAGATTAAA+TGG + chr2_1:36001515-36001534 Msa0206600:intron 20.0%
!! AAATAAAAGGTTAGACATTA+AGG - chr2_1:36001860-36001879 None:intergenic 20.0%
!!! ATTTTATCCATCTATTTTCT+TGG + chr2_1:36001876-36001895 Msa0206600:intron 20.0%
!!! TTCTTTTTTCTATTTATAGG+AGG - chr2_1:36002052-36002071 None:intergenic 20.0%
!! ATAAGGAAAATATATCAGTA+TGG - chr2_1:36002166-36002185 None:intergenic 20.0%
!!! ATACTGATATATTTTCCTTA+TGG + chr2_1:36002165-36002184 Msa0206600:intron 20.0%
!! GAATTGTATTATTGATGTAA+GGG + chr2_1:36002300-36002319 Msa0206600:intron 20.0%
!! AATTGTATTATTGATGTAAG+GGG + chr2_1:36002301-36002320 Msa0206600:intron 20.0%
!!! ACATATCTTAATATTTTCTG+AGG + chr2_1:36002439-36002458 Msa0206600:intron 20.0%
!! TACCATGTTACAATATAATT+AGG - chr2_1:36002707-36002726 None:intergenic 20.0%
!! ATTTATTCGAGAGAAAAATA+AGG + chr2_1:36002974-36002993 Msa0206600:intron 20.0%
!!! ATATTTCTGTCATTAAACTA+TGG + chr2_1:36003149-36003168 Msa0206600:intron 20.0%
!! ATGTATAAACTTAGATCAAT+AGG - chr2_1:36003358-36003377 None:intergenic 20.0%
!!! AACTGTATTGATAAATATTG+TGG + chr2_1:36003983-36004002 Msa0206600:three_prime_UTR 20.0%
!!! ACTGTATTGATAAATATTGT+GGG + chr2_1:36003984-36004003 Msa0206600:three_prime_UTR 20.0%
! GAAGAAAATAAAAGAGAATG+AGG - chr2_1:35995938-35995957 None:intergenic 25.0%
!! AGTATTTCAAGTGAAAAAGA+GGG - chr2_1:35996293-35996312 None:intergenic 25.0%
!!! TCTTTTTCACTTGAAATACT+CGG + chr2_1:35996293-35996312 Msa0206600:intron 25.0%
!! TCCGAAATTTTGTAATTGAT+AGG - chr2_1:35996632-35996651 None:intergenic 25.0%
! AGTAATTCAAAAACCAATTG+TGG - chr2_1:35996708-35996727 None:intergenic 25.0%
!!! ACAATTGGTTTTTGAATTAC+TGG + chr2_1:35996707-35996726 Msa0206600:intron 25.0%
!! AAATTTTCTAACCCAGTATT+AGG - chr2_1:35996741-35996760 None:intergenic 25.0%
! ATATTGAACACATACAAGAA+GGG - chr2_1:35997015-35997034 None:intergenic 25.0%
! AATATTGAACACATACAAGA+AGG - chr2_1:35997016-35997035 None:intergenic 25.0%
!! TTTAGATCAAAACCAAGTTT+TGG - chr2_1:35997158-35997177 None:intergenic 25.0%
!! TATTAATGGATAATTGGGTA+TGG - chr2_1:35997333-35997352 None:intergenic 25.0%
! TATGGCAAAATTTCTTCTAA+AGG - chr2_1:35997361-35997380 None:intergenic 25.0%
! TTAAAAAGAAAGAGCTCTAT+AGG - chr2_1:35997417-35997436 None:intergenic 25.0%
! ATATAAAACATTCCATTTGG+TGG - chr2_1:35997577-35997596 None:intergenic 25.0%
! ATGTGCATTCATAGAAATAA+TGG + chr2_1:35998127-35998146 Msa0206600:intron 25.0%
!!! ACTGTTGAAGTATCTTTTTT+CGG + chr2_1:35998585-35998604 Msa0206600:intron 25.0%
! TTATGTTTGCAAAGAGTTAA+TGG - chr2_1:35998621-35998640 None:intergenic 25.0%
!!! CTTTTGTGCTTTAAGAAAAT+TGG - chr2_1:35998703-35998722 None:intergenic 25.0%
! CACAAAAGTTCATCAAATAT+TGG + chr2_1:35998715-35998734 Msa0206600:intron 25.0%
! TTCATCATTGCAATAAGAAA+AGG + chr2_1:35999423-35999442 Msa0206600:intron 25.0%
! CAAACTGAAAAAGTTATTCA+TGG - chr2_1:35999487-35999506 None:intergenic 25.0%
! TTACATTCTCAAAAATACTG+TGG - chr2_1:35999527-35999546 None:intergenic 25.0%
! TGAGAATGTAAAAATATGAG+TGG + chr2_1:35999536-35999555 Msa0206600:intron 25.0%
!! TCTATATTTTGTGTCTCATT+TGG + chr2_1:35999718-35999737 Msa0206600:intron 25.0%
!! CTATATTTTGTGTCTCATTT+GGG + chr2_1:35999719-35999738 Msa0206600:intron 25.0%
!!! ATTTGTTATGTTTGAGTAAG+AGG - chr2_1:35999911-35999930 None:intergenic 25.0%
! ATTGCCACTGTTAATTTATT+TGG + chr2_1:35999990-36000009 Msa0206600:intron 25.0%
! TATGCCAAATAAATTAACAG+TGG - chr2_1:35999997-36000016 None:intergenic 25.0%
!!! TCTTTGAAAACTTCTTCTTT+TGG - chr2_1:36000042-36000061 None:intergenic 25.0%
! AATTACATCTTTCTGCTATT+CGG + chr2_1:36000294-36000313 Msa0206600:intron 25.0%
! GAAACTCTACTTACATTTAT+TGG + chr2_1:36000355-36000374 Msa0206600:intron 25.0%
!!! TTTATTGGTCTTAATTGACA+TGG + chr2_1:36000370-36000389 Msa0206600:intron 25.0%
! AAATAAGAAGCGATATACAA+AGG - chr2_1:36000594-36000613 None:intergenic 25.0%
! TGATGTCAACCTATTATATT+TGG - chr2_1:36001279-36001298 None:intergenic 25.0%
! AGACATTAAGAGAAAATCAA+AGG - chr2_1:36001348-36001367 None:intergenic 25.0%
!!! TCGAAAGATTTTAGAATTCA+TGG + chr2_1:36001665-36001684 Msa0206600:CDS 25.0%
!!! AGATTTTAGAATTCATGGAT+TGG + chr2_1:36001670-36001689 Msa0206600:CDS 25.0%
!!! GATTTTAGAATTCATGGATT+GGG + chr2_1:36001671-36001690 Msa0206600:CDS 25.0%
!!! ATTTTAGAATTCATGGATTG+GGG + chr2_1:36001672-36001691 Msa0206600:CDS 25.0%
! AACCAGTTAAAATACAAAAG+CGG - chr2_1:36001798-36001817 None:intergenic 25.0%
! TCATATTGTGAGTATCTATA+CGG + chr2_1:36002125-36002144 Msa0206600:intron 25.0%
!!! CTTATGGTTTGTTTTGATAT+CGG + chr2_1:36002181-36002200 Msa0206600:intron 25.0%
! GGAATTGTATTATTGATGTA+AGG + chr2_1:36002299-36002318 Msa0206600:intron 25.0%
!!! ATCTTAATATTTTCTGAGGT+TGG + chr2_1:36002443-36002462 Msa0206600:intron 25.0%
! ATAAACATGAACTACAGTAT+AGG - chr2_1:36002559-36002578 None:intergenic 25.0%
! GACCTAATTATATTGTAACA+TGG + chr2_1:36002702-36002721 Msa0206600:intron 25.0%
!! ATAGAATATCTTTGTTTGCA+TGG + chr2_1:36002779-36002798 Msa0206600:intron 25.0%
! TAATACATTTCTATGAATCC+AGG + chr2_1:36002890-36002909 Msa0206600:intron 25.0%
! GAAAAGACGTTGAAATATTT+CGG - chr2_1:36003228-36003247 None:intergenic 25.0%
! GAAATTAATGATTCCTTTGA+AGG + chr2_1:36003502-36003521 Msa0206600:CDS 25.0%
!!! TTTTCTGAAGCTATTTTCAT+TGG + chr2_1:36003714-36003733 Msa0206600:intron 25.0%
! AATATAACTAGTATCATGTG+AGG - chr2_1:36004010-36004029 None:intergenic 25.0%
! AGTATATATGTTAGGTAACA+AGG - chr2_1:36004077-36004096 None:intergenic 25.0%
GATATTGAGAGTTAAAGTTG+TGG - chr2_1:35996000-35996019 None:intergenic 30.0%
TCAATTCATTAACGAACCTT+GGG - chr2_1:35996067-35996086 None:intergenic 30.0%
ATCAATTCATTAACGAACCT+TGG - chr2_1:35996068-35996087 None:intergenic 30.0%
! TTTTGATAAGGCAACAAGAA+AGG + chr2_1:35996154-35996173 Msa0206600:intron 30.0%
! GAGTATTTCAAGTGAAAAAG+AGG - chr2_1:35996294-35996313 None:intergenic 30.0%
CACAAAATAAGGAATTCTAG+AGG - chr2_1:35996484-35996503 None:intergenic 30.0%
! TTGTGTTATTCACAAAGCAA+TGG - chr2_1:35996543-35996562 None:intergenic 30.0%
! GGTTAGAAAATTTTGCATGA+TGG + chr2_1:35996748-35996767 Msa0206600:intron 30.0%
AAGCAAGAATCTTATAAAGC+AGG - chr2_1:35996890-35996909 None:intergenic 30.0%
GCTTTATAAGATTCTTGCTT+TGG + chr2_1:35996890-35996909 Msa0206600:intron 30.0%
!! AGGATGTCTTTAACTTGTTA+TGG + chr2_1:35996959-35996978 Msa0206600:intron 30.0%
TCATGGAACTGATACAAATA+TGG + chr2_1:35997038-35997057 Msa0206600:intron 30.0%
CATGGAACTGATACAAATAT+GGG + chr2_1:35997039-35997058 Msa0206600:intron 30.0%
TGCTTATATTTCATTCGAGA+AGG + chr2_1:35997455-35997474 Msa0206600:intron 30.0%
! GTAACATTTTTCTCTGTTCA+AGG - chr2_1:35997733-35997752 None:intergenic 30.0%
CAGTGATAGATATTATGAGA+TGG + chr2_1:35998040-35998059 Msa0206600:intron 30.0%
GATAGATATTATGAGATGGA+AGG + chr2_1:35998044-35998063 Msa0206600:intron 30.0%
AAGAAAAAGAAAACAAACGG+AGG - chr2_1:35998392-35998411 None:intergenic 30.0%
!! TCTTTTTCATTTGTAGATGG+TGG + chr2_1:35998408-35998427 Msa0206600:intron 30.0%
TCTAATACGATATACACATC+AGG - chr2_1:35998538-35998557 None:intergenic 30.0%
!!! AAGTATCTTTTTTCGGATGT+TGG + chr2_1:35998592-35998611 Msa0206600:intron 30.0%
CGAAAAAAGAAAAGAAAACG+AGG - chr2_1:35999348-35999367 None:intergenic 30.0%
TGTATCATCTGAAAATGTGT+CGG + chr2_1:35999394-35999413 Msa0206600:intron 30.0%
TCATTGCAATAAGAAAAGGA+TGG + chr2_1:35999427-35999446 Msa0206600:intron 30.0%
!!! AACTTTTTCAGTTTGTTGCA+TGG + chr2_1:35999492-35999511 Msa0206600:intron 30.0%
CTTCTCAGTAATAGCATTAA+GGG + chr2_1:35999609-35999628 Msa0206600:intron 30.0%
TAATAGCATTAAGGGTCTAA+AGG + chr2_1:35999617-35999636 Msa0206600:intron 30.0%
CAAAATATAGACAGAAAGAG+AGG - chr2_1:35999709-35999728 None:intergenic 30.0%
ATAACTATGCATTGCAGAAA+TGG - chr2_1:35999758-35999777 None:intergenic 30.0%
TGCATAGTTATGAAGCATAA+AGG + chr2_1:35999767-35999786 Msa0206600:intron 30.0%
TTGGCATATTTACAGATTGA+TGG + chr2_1:36000009-36000028 Msa0206600:intron 30.0%
! TGAAAACTTCTTCTTTTGGA+CGG - chr2_1:36000038-36000057 None:intergenic 30.0%
AGAGTGAAAATAGTGAAATC+TGG + chr2_1:36000096-36000115 Msa0206600:CDS 30.0%
GATTCCCTACAAATATATCA+TGG - chr2_1:36000160-36000179 None:intergenic 30.0%
CTATGTCAATTGTTAAACTC+TGG - chr2_1:36000239-36000258 None:intergenic 30.0%
!!! TTCGGTTTTGTTATGATATG+AGG + chr2_1:36000312-36000331 Msa0206600:intron 30.0%
!!! TCGGTTTTGTTATGATATGA+GGG + chr2_1:36000313-36000332 Msa0206600:intron 30.0%
AGATGGTAGTACTTTGTAAA+AGG + chr2_1:36000515-36000534 Msa0206600:intron 30.0%
!!! ATTTTGCTTTAGCTTGTTAC+AGG + chr2_1:36000610-36000629 Msa0206600:intron 30.0%
!! TTAGCTTGTTACAGGATAAA+TGG + chr2_1:36000618-36000637 Msa0206600:intron 30.0%
! GGAATGTTATTTAGTCTAGT+AGG - chr2_1:36000653-36000672 None:intergenic 30.0%
TGATGGAAAAACTAGGTTAA+AGG + chr2_1:36000739-36000758 Msa0206600:CDS 30.0%
ACTACAATTACATACAGTTC+TGG - chr2_1:36000783-36000802 None:intergenic 30.0%
TAGAATACTCTTCTTACGAA+AGG - chr2_1:36001038-36001057 None:intergenic 30.0%
ATTAAAAACAAGACAAGTCC+AGG - chr2_1:36001213-36001232 None:intergenic 30.0%
ATACAGGATGTTTATCGAAT+TGG + chr2_1:36001390-36001409 Msa0206600:intron 30.0%
ATGTTAGAACAAAAGGAGTA+AGG - chr2_1:36001487-36001506 None:intergenic 30.0%
GTGTTGTATGTTAGAACAAA+AGG - chr2_1:36001494-36001513 None:intergenic 30.0%
!!! GCTTTTGTATTTTAACTGGT+TGG + chr2_1:36001797-36001816 Msa0206600:intron 30.0%
GATACTCACAATATGATGTT+CGG - chr2_1:36002121-36002140 None:intergenic 30.0%
CATATTGTGAGTATCTATAC+GGG + chr2_1:36002126-36002145 Msa0206600:intron 30.0%
CGATATCAAAACAAACCATA+AGG - chr2_1:36002183-36002202 None:intergenic 30.0%
ACTTGTGAATTTCTAATGTC+AGG + chr2_1:36002214-36002233 Msa0206600:intron 30.0%
AATCCATCAAGCTAAATAGA+AGG - chr2_1:36002373-36002392 None:intergenic 30.0%
GTTGGATATACAGGATTTAA+AGG + chr2_1:36002461-36002480 Msa0206600:intron 30.0%
!! TTAGCATTGATTAGGATAAC+TGG - chr2_1:36002513-36002532 None:intergenic 30.0%
! AGTTATGAGTTCATCAGTTT+TGG - chr2_1:36002649-36002668 None:intergenic 30.0%
TTACAAGTTGTAATATCCCT+GGG - chr2_1:36002809-36002828 None:intergenic 30.0%
TGAATGAACTGTTCAAAAAG+GGG - chr2_1:36002832-36002851 None:intergenic 30.0%
GTGAATGAACTGTTCAAAAA+GGG - chr2_1:36002833-36002852 None:intergenic 30.0%
TGTGAATGAACTGTTCAAAA+AGG - chr2_1:36002834-36002853 None:intergenic 30.0%
AATTGTTATCTTCAACTTGC+TGG - chr2_1:36002957-36002976 None:intergenic 30.0%
TCTTCTTAATCACTAGACAA+TGG + chr2_1:36003008-36003027 Msa0206600:intron 30.0%
CTTCTTAATCACTAGACAAT+GGG + chr2_1:36003009-36003028 Msa0206600:intron 30.0%
TTCTTAATCACTAGACAATG+GGG + chr2_1:36003010-36003029 Msa0206600:intron 30.0%
! TTGAAAGTTGCTACTTGTTT+CGG + chr2_1:36003064-36003083 Msa0206600:intron 30.0%
! ATATTTCAACGTCTTTTCAG+AGG + chr2_1:36003230-36003249 Msa0206600:intron 30.0%
TCATTAATTTCATCCACAGT+AGG - chr2_1:36003493-36003512 None:intergenic 30.0%
GATAAGAAGATCTATTACCT+TGG - chr2_1:36003532-36003551 None:intergenic 30.0%
AATGAAACCAAGAAATCATC+AGG + chr2_1:36003627-36003646 Msa0206600:CDS 30.0%
ATGAAACCAAGAAATCATCA+GGG + chr2_1:36003628-36003647 Msa0206600:CDS 30.0%
CCAAGTGATTATGGTAAAAT+CGG + chr2_1:36003852-36003871 Msa0206600:three_prime_UTR 30.0%
ATCTTGAGAATTTCAGAAGA+GGG + chr2_1:36003938-36003957 Msa0206600:three_prime_UTR 30.0%
AACAAGGAGAAATTATCAAC+TGG - chr2_1:36004061-36004080 None:intergenic 30.0%
AAAATCCATTGAGAGCAATG+TGG + chr2_1:35995841-35995860 Msa0206600:five_prime_UTR 35.0%
! TTTCAAGTGAAAAAGAGGGA+GGG - chr2_1:35996289-35996308 None:intergenic 35.0%
! ATTTCAAGTGAAAAAGAGGG+AGG - chr2_1:35996290-35996309 None:intergenic 35.0%
TTCCGATGAATGAATTAACG+CGG - chr2_1:35996372-35996391 None:intergenic 35.0%
!!! GAATTCCTTATTTTGTGCTC+TGG + chr2_1:35996487-35996506 Msa0206600:intron 35.0%
CTAAACCAGAGCACAAAATA+AGG - chr2_1:35996495-35996514 None:intergenic 35.0%
AATGGTTAAACTCTGCCAAT+CGG - chr2_1:35996525-35996544 None:intergenic 35.0%
AATTTGCACACTCTCATGTA+AGG + chr2_1:35996565-35996584 Msa0206600:intron 35.0%
TATACGTCAAATCCTCAATG+AGG - chr2_1:35996608-35996627 None:intergenic 35.0%
!! TGGTTCTAACTCCTAATACT+GGG + chr2_1:35996727-35996746 Msa0206600:intron 35.0%
!! CAGTCTTTGAAGTATAGTGT+TGG - chr2_1:35996794-35996813 None:intergenic 35.0%
CAACACTATACTTCAAAGAC+TGG + chr2_1:35996792-35996811 Msa0206600:intron 35.0%
AAGATGTTCTTCCTACCAAA+AGG - chr2_1:35996925-35996944 None:intergenic 35.0%
CATCTTTACAAGCTCTTCAT+AGG + chr2_1:35996939-35996958 Msa0206600:intron 35.0%
! AAGGGAATTGGTCTCTAATT+TGG - chr2_1:35996997-35997016 None:intergenic 35.0%
AACACATACAAGAAGGGAAT+TGG - chr2_1:35997009-35997028 None:intergenic 35.0%
!! TTTTGGAAGACTACTAGACA+AGG - chr2_1:35997114-35997133 None:intergenic 35.0%
!!! TGTCTGTACACTCTTGTTTT+TGG - chr2_1:35997131-35997150 None:intergenic 35.0%
TACAGACAATTGCCAAAACT+TGG + chr2_1:35997143-35997162 Msa0206600:intron 35.0%
!! ATCGGCAGTGTTGATTAAAT+CGG + chr2_1:35997210-35997229 Msa0206600:intron 35.0%
AGCTTAATCTATACACTGGA+AGG - chr2_1:35997239-35997258 None:intergenic 35.0%
!! ATGAGCGCTGATTGAAAAAT+GGG - chr2_1:35997291-35997310 None:intergenic 35.0%
!! AATGAGCGCTGATTGAAAAA+TGG - chr2_1:35997292-35997311 None:intergenic 35.0%
TATGGAAACACATAGGTTTG+TGG - chr2_1:35997315-35997334 None:intergenic 35.0%
AATTGGGTATGGAAACACAT+AGG - chr2_1:35997322-35997341 None:intergenic 35.0%
! TTTGTGGCAGAGTATTTGTA+TGG - chr2_1:35997379-35997398 None:intergenic 35.0%
! TAAAACATTCCATTTGGTGG+TGG - chr2_1:35997574-35997593 None:intergenic 35.0%
AGGACAGTTTGAGTAACAAA+TGG + chr2_1:35997652-35997671 Msa0206600:intron 35.0%
GAACAGAGAAAAATGTTACG+AGG + chr2_1:35997734-35997753 Msa0206600:intron 35.0%
GCATTCATAGAAATAATGGC+CGG + chr2_1:35998131-35998150 Msa0206600:intron 35.0%
GATTAGTGCACATATCAACT+GGG + chr2_1:35998193-35998212 Msa0206600:CDS 35.0%
ATTAGTGCACATATCAACTG+GGG + chr2_1:35998194-35998213 Msa0206600:CDS 35.0%
TGGCTTTCAGCATATGAAAA+TGG - chr2_1:35998367-35998386 None:intergenic 35.0%
TGCGAAGATGTTAAGCAAAA+AGG + chr2_1:35998445-35998464 Msa0206600:CDS 35.0%
GCGAAGATGTTAAGCAAAAA+GGG + chr2_1:35998446-35998465 Msa0206600:CDS 35.0%
AAGATGTTAAGCAAAAAGGG+TGG + chr2_1:35998449-35998468 Msa0206600:CDS 35.0%
TTTCTCTAGACTTTCAGCTT+GGG - chr2_1:35998503-35998522 None:intergenic 35.0%
! TTTTCTCTAGACTTTCAGCT+TGG - chr2_1:35998504-35998523 None:intergenic 35.0%
TCAGTCTGTTCTTACAAATG+TGG + chr2_1:35998760-35998779 Msa0206600:intron 35.0%
TGATATCTCTTAACCCACTT+GGG - chr2_1:35998965-35998984 None:intergenic 35.0%
ATGATATCTCTTAACCCACT+TGG - chr2_1:35998966-35998985 None:intergenic 35.0%
AAAGCGCATACATTACTCAA+TGG - chr2_1:35999093-35999112 None:intergenic 35.0%
!!! TCATGAGAAATTTTTTCCGC+CGG + chr2_1:35999249-35999268 Msa0206600:CDS 35.0%
AGACAGAAGAAATCAAAGCA+AGG + chr2_1:35999272-35999291 Msa0206600:CDS 35.0%
!! ACTTTTTCTTCAGTGTCATC+AGG - chr2_1:35999310-35999329 None:intergenic 35.0%
TCGCATTTGTAATCAAACAG+AGG + chr2_1:35999559-35999578 Msa0206600:intron 35.0%
CCTTAATGCTATTACTGAGA+AGG - chr2_1:35999611-35999630 None:intergenic 35.0%
CCTTCTCAGTAATAGCATTA+AGG + chr2_1:35999608-35999627 Msa0206600:intron 35.0%
ATGTCATTAATGTCAACCGA+TGG + chr2_1:35999964-35999983 Msa0206600:intron 35.0%
TGTCATTAATGTCAACCGAT+GGG + chr2_1:35999965-35999984 Msa0206600:intron 35.0%
GTGAAAATAGTGAAATCTGG+AGG + chr2_1:36000099-36000118 Msa0206600:CDS 35.0%
ATGGCTGGAGATTGAAAAAT+AGG - chr2_1:36000141-36000160 None:intergenic 35.0%
TCCAGCCATGATATATTTGT+AGG + chr2_1:36000152-36000171 Msa0206600:intron 35.0%
CCAGCCATGATATATTTGTA+GGG + chr2_1:36000153-36000172 Msa0206600:intron 35.0%
!! ATTGGTCTTAATTGACATGG+TGG + chr2_1:36000373-36000392 Msa0206600:intron 35.0%
!! TTGGTCTTAATTGACATGGT+GGG + chr2_1:36000374-36000393 Msa0206600:intron 35.0%
! TATTCAGAAAAACCGATTCC+TGG + chr2_1:36000459-36000478 Msa0206600:intron 35.0%
!! GAAGCTTTTCTAGCACATAA+AGG - chr2_1:36000572-36000591 None:intergenic 35.0%
TTGTTACAGGATAAATGGAG+AGG + chr2_1:36000623-36000642 Msa0206600:intron 35.0%
TTTCCTCATTTCTCGAGAAT+GGG - chr2_1:36000675-36000694 None:intergenic 35.0%
ATTTCCTCATTTCTCGAGAA+TGG - chr2_1:36000676-36000695 None:intergenic 35.0%
!! CCTAGTTTTTCCATCATTGA+TGG - chr2_1:36000735-36000754 None:intergenic 35.0%
! CCATCAATGATGGAAAAACT+AGG + chr2_1:36000732-36000751 Msa0206600:CDS 35.0%
TTGCCATTCTTCCTGTTATT+TGG + chr2_1:36000813-36000832 Msa0206600:intron 35.0%
! TGCCATTCTTCCTGTTATTT+GGG + chr2_1:36000814-36000833 Msa0206600:intron 35.0%
CTAACACGGAATTGTCAATA+TGG - chr2_1:36000960-36000979 None:intergenic 35.0%
AACTGAGGTGAATGAAGTTT+AGG + chr2_1:36001154-36001173 Msa0206600:intron 35.0%
GATGGTCAGATGGAAAAAAT+AGG + chr2_1:36001176-36001195 Msa0206600:intron 35.0%
AAATAGGTTTCACAGTTTCC+TGG + chr2_1:36001192-36001211 Msa0206600:intron 35.0%
GAAGAAGATATCATCAGAGT+AGG - chr2_1:36001246-36001265 None:intergenic 35.0%
AACTGAATCCAGAAATGGTA+CGG + chr2_1:36001308-36001327 Msa0206600:intron 35.0%
AAAAATGTCCGTACCATTTC+TGG - chr2_1:36001319-36001338 None:intergenic 35.0%
TTATCGAATTGGTACACTGT+TGG + chr2_1:36001401-36001420 Msa0206600:CDS 35.0%
! CTTTACACGTTTTCCATCAT+TGG - chr2_1:36001457-36001476 None:intergenic 35.0%
! CAATGATGGAAAACGTGTAA+AGG + chr2_1:36001455-36001474 Msa0206600:CDS 35.0%
AAAGGAACCTTCATCAACAT+TGG + chr2_1:36001708-36001727 Msa0206600:CDS 35.0%
! TATGGAACCAATGTTGATGA+AGG - chr2_1:36001718-36001737 None:intergenic 35.0%
!! TTCATCAACATTGGTTCCAT+AGG + chr2_1:36001717-36001736 Msa0206600:CDS 35.0%
TCAGCTCTTTGATATACCTA+TGG - chr2_1:36001736-36001755 None:intergenic 35.0%
TCAAAGAGCTGAAACCTTTA+TGG + chr2_1:36001744-36001763 Msa0206600:intron 35.0%
!!! TGCCGCTTTTGTATTTTAAC+TGG + chr2_1:36001793-36001812 Msa0206600:intron 35.0%
!!! GTATTTTAACTGGTTGGAGT+TGG + chr2_1:36001803-36001822 Msa0206600:intron 35.0%
TGGATGACCAAGAAAATAGA+TGG - chr2_1:36001886-36001905 None:intergenic 35.0%
GCAAGATGACATGTATTTCT+TGG + chr2_1:36002255-36002274 Msa0206600:CDS 35.0%
AGATGACATGTATTTCTTGG+TGG + chr2_1:36002258-36002277 Msa0206600:CDS 35.0%
AAGCTAAATAGAAGGTTCAG+AGG - chr2_1:36002365-36002384 None:intergenic 35.0%
!! GAACCTTCTATTTAGCTTGA+TGG + chr2_1:36002367-36002386 Msa0206600:intron 35.0%
TGAAGAAAACAATAGCAGCT+TGG - chr2_1:36002420-36002439 None:intergenic 35.0%
!!! TTTTCTGAGGTTGGATATAC+AGG + chr2_1:36002452-36002471 Msa0206600:intron 35.0%
!! CCTTAAGCTTAGCATTGATT+AGG - chr2_1:36002521-36002540 None:intergenic 35.0%
CCTAATCAATGCTAAGCTTA+AGG + chr2_1:36002518-36002537 Msa0206600:CDS 35.0%
ACAGTATAGGAAACTAGGAA+AGG - chr2_1:36002546-36002565 None:intergenic 35.0%
GAACTACAGTATAGGAAACT+AGG - chr2_1:36002551-36002570 None:intergenic 35.0%
AACTGATGAACTCATAACTG+AGG + chr2_1:36002650-36002669 Msa0206600:intron 35.0%
GTTACAAGTTGTAATATCCC+TGG - chr2_1:36002810-36002829 None:intergenic 35.0%
!!! CGGATTTTAGAATCCGAATA+GGG - chr2_1:36003208-36003227 None:intergenic 35.0%
!!! TCGGATTTTAGAATCCGAAT+AGG - chr2_1:36003209-36003228 None:intergenic 35.0%
! ACGTCTTTTCAGAGGTTTTA+TGG + chr2_1:36003238-36003257 Msa0206600:intron 35.0%
!! CGTCTTTTCAGAGGTTTTAT+GGG + chr2_1:36003239-36003258 Msa0206600:intron 35.0%
!! TATGGGCTTTTTAAGCAGTT+CGG + chr2_1:36003256-36003275 Msa0206600:intron 35.0%
ACATCACTGCTTTATGATGT+AGG + chr2_1:36003374-36003393 Msa0206600:intron 35.0%
! CTCTTTTGTACAGCTCATAA+CGG - chr2_1:36003414-36003433 None:intergenic 35.0%
! AGTACATACTTCTCTTTTCC+CGG - chr2_1:36003448-36003467 None:intergenic 35.0%
! ATTCCTTTGAAGGAAAACCA+AGG + chr2_1:36003512-36003531 Msa0206600:CDS 35.0%
!! TTACCTTGGTTTTCCTTCAA+AGG - chr2_1:36003518-36003537 None:intergenic 35.0%
! ATGTACCTATTTTCTTGTGC+AGG + chr2_1:36003741-36003760 Msa0206600:intron 35.0%
! TGTACCTATTTTCTTGTGCA+GGG + chr2_1:36003742-36003761 Msa0206600:intron 35.0%
GACAATTTGCCAAGTGATTA+TGG + chr2_1:36003843-36003862 Msa0206600:three_prime_UTR 35.0%
! CCGATTTTACCATAATCACT+TGG - chr2_1:36003855-36003874 None:intergenic 35.0%
GATCTTGAGAATTTCAGAAG+AGG + chr2_1:36003937-36003956 Msa0206600:three_prime_UTR 35.0%
GTAGTGTGTTAGAACTTAGA+AGG - chr2_1:36004114-36004133 None:intergenic 35.0%
!! TGCTCTCAATGGATTTTCAG+TGG - chr2_1:35995838-35995857 None:intergenic 40.0%
TGAGGAAGAAGAGTTCTTGA+GGG - chr2_1:35995920-35995939 None:intergenic 40.0%
ATGAGGAAGAAGAGTTCTTG+AGG - chr2_1:35995921-35995940 None:intergenic 40.0%
GAGAGTTAAAGTTGTGGTGT+TGG - chr2_1:35995994-35996013 None:intergenic 40.0%
CTTGGGTCTTAATGGCAAAT+TGG - chr2_1:35996050-35996069 None:intergenic 40.0%
CAATTTGCCATTAAGACCCA+AGG + chr2_1:35996048-35996067 Msa0206600:CDS 40.0%
TAACGAACCTTGGGTCTTAA+TGG - chr2_1:35996058-35996077 None:intergenic 40.0%
CCTGATATCATCACCTTCAA+TGG - chr2_1:35996203-35996222 None:intergenic 40.0%
CCATTGAAGGTGATGATATC+AGG + chr2_1:35996200-35996219 Msa0206600:CDS 40.0%
CTCCGCGTTAATTCATTCAT+CGG + chr2_1:35996367-35996386 Msa0206600:intron 40.0%
TTGTTGTACGTCACATAGTG+TGG + chr2_1:35996447-35996466 Msa0206600:intron 40.0%
TGTTGTACGTCACATAGTGT+GGG + chr2_1:35996448-35996467 Msa0206600:intron 40.0%
ATGGTTAAACTCTGCCAATC+GGG - chr2_1:35996524-35996543 None:intergenic 40.0%
ACTTACACCAGTTGTGACTT+GGG - chr2_1:35996661-35996680 None:intergenic 40.0%
TGTGGTTGCCAAAGATGTTT+AGG - chr2_1:35996690-35996709 None:intergenic 40.0%
ACATCTTTGGCAACCACAAT+TGG + chr2_1:35996692-35996711 Msa0206600:intron 40.0%
!! CTGGTTCTAACTCCTAATAC+TGG + chr2_1:35996726-35996745 Msa0206600:intron 40.0%
!! CTTTGAAGTATAGTGTTGGC+AGG - chr2_1:35996790-35996809 None:intergenic 40.0%
CTAACATGTGTGAGGTTTGT+AGG - chr2_1:35996856-35996875 None:intergenic 40.0%
!!! CTTTGGTAGTGTTTGCCTTT+TGG + chr2_1:35996907-35996926 Msa0206600:intron 40.0%
GGAACTGATACAAATATGGG+AGG + chr2_1:35997042-35997061 Msa0206600:intron 40.0%
CTATGGAATGCTACTAGACA+AGG - chr2_1:35997088-35997107 None:intergenic 40.0%
TTAATCAACACTGCCGATAC+AGG - chr2_1:35997208-35997227 None:intergenic 40.0%
CTGCAGCTTAATCTATACAC+TGG - chr2_1:35997243-35997262 None:intergenic 40.0%
!! TGAGCGCTGATTGAAAAATG+GGG - chr2_1:35997290-35997309 None:intergenic 40.0%
GTCAGAATCTGGGTTATTTG+TGG - chr2_1:35997395-35997414 None:intergenic 40.0%
AGCTCTATAGGTCAGAATCT+GGG - chr2_1:35997405-35997424 None:intergenic 40.0%
! TTTCATTCGAGAAGGTGCAT+TGG + chr2_1:35997463-35997482 Msa0206600:intron 40.0%
TCAATTCAACCACCACCAAA+TGG + chr2_1:35997562-35997581 Msa0206600:intron 40.0%
GAAAAATGTTACGAGGCAGA+AGG + chr2_1:35997741-35997760 Msa0206600:intron 40.0%
AGACACAACGCATATGATCA+TGG - chr2_1:35998159-35998178 None:intergenic 40.0%
!! TTGTGTCTGTTTCTGCAGTA+TGG + chr2_1:35998171-35998190 Msa0206600:intron 40.0%
! GGATTAGTGCACATATCAAC+TGG + chr2_1:35998192-35998211 Msa0206600:CDS 40.0%
GCAAAAGAGTTCATGAATGC+TGG + chr2_1:35998264-35998283 Msa0206600:CDS 40.0%
ACAGCTGTCACAATTTCATC+AGG - chr2_1:35998300-35998319 None:intergenic 40.0%
AAAGAAAACAAACGGAGGCA+TGG - chr2_1:35998387-35998406 None:intergenic 40.0%
AGAAGGTTAGATCCAGTAAC+TGG + chr2_1:35999217-35999236 Msa0206600:CDS 40.0%
TGATAGATCTTGCCAGTTAC+TGG - chr2_1:35999232-35999251 None:intergenic 40.0%
! GCTTTGATTTCTTCTGTCTC+CGG - chr2_1:35999271-35999290 None:intergenic 40.0%
!!! TTCTTTTTTCGCTACCTTCG+TGG + chr2_1:35999357-35999376 Msa0206600:intron 40.0%
TACCTTCGTGGATATAACAC+TGG + chr2_1:35999369-35999388 Msa0206600:intron 40.0%
ACCTTCGTGGATATAACACT+GGG + chr2_1:35999370-35999389 Msa0206600:intron 40.0%
GCATTAAGGGTCTAAAGGAA+TGG + chr2_1:35999622-35999641 Msa0206600:intron 40.0%
AGGTTCATGTCATGACATTG+CGG - chr2_1:35999689-35999708 None:intergenic 40.0%
CCCTACAAATATATCATGGC+TGG - chr2_1:36000156-36000175 None:intergenic 40.0%
! TGGTCTTAATTGACATGGTG+GGG + chr2_1:36000375-36000394 Msa0206600:intron 40.0%
! ACCGATTCCTGGTATGAAAA+AGG + chr2_1:36000470-36000489 Msa0206600:CDS 40.0%
!! CCCTTTTTCATACCAGGAAT+CGG - chr2_1:36000474-36000493 None:intergenic 40.0%
CCGATTCCTGGTATGAAAAA+GGG + chr2_1:36000471-36000490 Msa0206600:CDS 40.0%
CGATTCCTGGTATGAAAAAG+GGG + chr2_1:36000472-36000491 Msa0206600:CDS 40.0%
! ACAAAGTACTACCATCTACC+TGG - chr2_1:36000512-36000531 None:intergenic 40.0%
!! GCTTTTCTAGCACATAAAGG+AGG - chr2_1:36000569-36000588 None:intergenic 40.0%
TTCCTCATTTCTCGAGAATG+GGG - chr2_1:36000674-36000693 None:intergenic 40.0%
CACCCAAATAACAGGAAGAA+TGG - chr2_1:36000819-36000838 None:intergenic 40.0%
! TCTAGAGTCACCCAAATAAC+AGG - chr2_1:36000827-36000846 None:intergenic 40.0%
GATGTCAGTGTTCTATAGGT+TGG - chr2_1:36000878-36000897 None:intergenic 40.0%
GTCTGATGTCAGTGTTCTAT+AGG - chr2_1:36000882-36000901 None:intergenic 40.0%
CACTTCACATCGAAACTTGT+CGG - chr2_1:36000992-36001011 None:intergenic 40.0%
CAAGTTTCGATGTGAAGTGT+CGG + chr2_1:36000993-36001012 Msa0206600:intron 40.0%
ACTCTTCTTACGAAAGGAGT+AGG - chr2_1:36001032-36001051 None:intergenic 40.0%
GAGGTGAATGAAGTTTAGGA+TGG + chr2_1:36001158-36001177 Msa0206600:intron 40.0%
! TGAAGTTTAGGATGGTCAGA+TGG + chr2_1:36001166-36001185 Msa0206600:intron 40.0%
!!! TCTTGTTTTTAATGCCCCTG+AGG + chr2_1:36001220-36001239 Msa0206600:intron 40.0%
TCCTGAACTGAATCCAGAAA+TGG + chr2_1:36001303-36001322 Msa0206600:CDS 40.0%
! ACCATTTCTGGATTCAGTTC+AGG - chr2_1:36001307-36001326 None:intergenic 40.0%
GCACTTTCATTTGCCAATGA+TGG + chr2_1:36001441-36001460 Msa0206600:CDS 40.0%
TGAAATCAACTTTGTCCTGC+AGG + chr2_1:36001578-36001597 Msa0206600:intron 40.0%
!! TTCATGGATTGGGGTGATTA+TGG + chr2_1:36001681-36001700 Msa0206600:CDS 40.0%
ATTTCTAATGTCAGGTGCAG+CGG + chr2_1:36002222-36002241 Msa0206600:intron 40.0%
! CAATTCCCTACAGCATTTTG+AGG - chr2_1:36002286-36002305 None:intergenic 40.0%
ATTGATGTAAGGGGATAGAG+TGG + chr2_1:36002310-36002329 Msa0206600:intron 40.0%
! TAGGATAACTGGTCTGTGTT+CGG - chr2_1:36002502-36002521 None:intergenic 40.0%
CCAGTGTACATTCGATAAAC+TGG - chr2_1:36002739-36002758 None:intergenic 40.0%
CCAGTTTATCGAATGTACAC+TGG + chr2_1:36002736-36002755 Msa0206600:intron 40.0%
! TTTGTTTGCATGGTTTTCCC+AGG + chr2_1:36002789-36002808 Msa0206600:intron 40.0%
! TTGTTTGCATGGTTTTCCCA+GGG + chr2_1:36002790-36002809 Msa0206600:intron 40.0%
TGCATAATACCACTAGAAGC+AGG - chr2_1:36002921-36002940 None:intergenic 40.0%
TTTCGGCTTCTCTATTATGC+AGG + chr2_1:36003081-36003100 Msa0206600:intron 40.0%
! ATGAATTTTTCCACCCTACG+AGG - chr2_1:36003317-36003336 None:intergenic 40.0%
TTGTACAGCTCATAACGGTA+TGG - chr2_1:36003409-36003428 None:intergenic 40.0%
! TTTTGTCCACCTTTCCTGAA+AGG + chr2_1:36003467-36003486 Msa0206600:CDS 40.0%
CCAAAACCCTGATGATTTCT+TGG - chr2_1:36003637-36003656 None:intergenic 40.0%
! CCAAGAAATCATCAGGGTTT+TGG + chr2_1:36003634-36003653 Msa0206600:CDS 40.0%
! GTACCTATTTTCTTGTGCAG+GGG + chr2_1:36003743-36003762 Msa0206600:intron 40.0%
TTGAGAATTTCAGAAGAGGG+TGG + chr2_1:36003941-36003960 Msa0206600:three_prime_UTR 40.0%
ATGAGCCACATTGCTCTCAA+TGG - chr2_1:35995849-35995868 None:intergenic 45.0%
GTGTGCAACATTGTTGCTAC+GGG - chr2_1:35995875-35995894 None:intergenic 45.0%
GGTGTGCAACATTGTTGCTA+CGG - chr2_1:35995876-35995895 None:intergenic 45.0%
AAGAGTTCTTGAGGGGATGT+AGG - chr2_1:35995912-35995931 None:intergenic 45.0%
GAGGAAGAAGAGTTCTTGAG+GGG - chr2_1:35995919-35995938 None:intergenic 45.0%
! TGGTGTTGGAGAAGTAGACA+TGG - chr2_1:35995980-35995999 None:intergenic 45.0%
ATTGGCATGTCTGCTGAAGT+TGG - chr2_1:35996032-35996051 None:intergenic 45.0%
TTATAAGTGAGGGCAGACCT+TGG - chr2_1:35996331-35996350 None:intergenic 45.0%
CACATAGTGTGGGAGAGAAA+AGG + chr2_1:35996458-35996477 Msa0206600:intron 45.0%
!! TGGTTTAGTTCTTGCCCGAT+TGG + chr2_1:35996507-35996526 Msa0206600:intron 45.0%
CACACTCTCATGTAAGGTCA+GGG + chr2_1:35996571-35996590 Msa0206600:intron 45.0%
CAAATCCTCAATGAGGTTGG+TGG - chr2_1:35996601-35996620 None:intergenic 45.0%
CGTCAAATCCTCAATGAGGT+TGG - chr2_1:35996604-35996623 None:intergenic 45.0%
ACTAGAACCCAAGTCACAAC+TGG + chr2_1:35996651-35996670 Msa0206600:intron 45.0%
CACTTACACCAGTTGTGACT+TGG - chr2_1:35996662-35996681 None:intergenic 45.0%
CAAGTCACAACTGGTGTAAG+TGG + chr2_1:35996660-35996679 Msa0206600:intron 45.0%
TCACAACTGGTGTAAGTGGA+AGG + chr2_1:35996664-35996683 Msa0206600:intron 45.0%
GTGGAAGGCCTAAACATCTT+TGG + chr2_1:35996679-35996698 Msa0206600:intron 45.0%
!! TATAGTGTTGGCAGGCAATG+AGG - chr2_1:35996782-35996801 None:intergenic 45.0%
ACTGGTAAGAAACAGATGCG+AGG + chr2_1:35996810-35996829 Msa0206600:intron 45.0%
GCATTGCTCTAACATGTGTG+AGG - chr2_1:35996864-35996883 None:intergenic 45.0%
! GGTAGTGTTTGCCTTTTGGT+AGG + chr2_1:35996911-35996930 Msa0206600:intron 45.0%
ACTACTAGACAAGGCGACTA+TGG - chr2_1:35997105-35997124 None:intergenic 45.0%
CTGCATGTTCCAACCTGTAT+CGG + chr2_1:35997192-35997211 Msa0206600:intron 45.0%
AGATTAAGCTGCAGCCATGA+AGG + chr2_1:35997249-35997268 Msa0206600:intron 45.0%
GAGCTCTATAGGTCAGAATC+TGG - chr2_1:35997406-35997425 None:intergenic 45.0%
AACGCATATGATCATGGCTC+CGG - chr2_1:35998153-35998172 None:intergenic 45.0%
GTAGCAGCTGGAACAGAAAT+AGG + chr2_1:35998234-35998253 Msa0206600:CDS 45.0%
! ATTTGTAGATGGTGGCAGCA+CGG + chr2_1:35998416-35998435 Msa0206600:intron 45.0%
CAAAAAGGGTGGCTTCTTGA+CGG + chr2_1:35998460-35998479 Msa0206600:CDS 45.0%
CAGCTTGGGATAAACTACGA+GGG - chr2_1:35998489-35998508 None:intergenic 45.0%
TCAGCTTGGGATAAACTACG+AGG - chr2_1:35998490-35998509 None:intergenic 45.0%
CGAAATTAACCCGCCCAAAT+TGG + chr2_1:35998865-35998884 Msa0206600:intron 45.0%
! ATTCTCCCTGGTGCCAATTT+GGG - chr2_1:35998881-35998900 None:intergenic 45.0%
ATTCTGATCGACAGATGCGT+TGG + chr2_1:35999193-35999212 Msa0206600:CDS 45.0%
TTGATTTCTTCTGTCTCCGG+CGG - chr2_1:35999268-35999287 None:intergenic 45.0%
GGTTCATGTCATGACATTGC+GGG - chr2_1:35999688-35999707 None:intergenic 45.0%
TAACAGTGGCAATGTCCCAT+CGG - chr2_1:35999983-36000002 None:intergenic 45.0%
GCATCTTTGATCCAGGTAGA+TGG + chr2_1:36000498-36000517 Msa0206600:intron 45.0%
TTCCCCATTCTCGAGAAATG+AGG + chr2_1:36000669-36000688 Msa0206600:CDS 45.0%
! ATGTGCTACTAGCTACACAG+AGG + chr2_1:36000708-36000727 Msa0206600:CDS 45.0%
! TGTGCTACTAGCTACACAGA+GGG + chr2_1:36000709-36000728 Msa0206600:CDS 45.0%
ACATCGAAACTTGTCGGTGT+CGG - chr2_1:36000986-36001005 None:intergenic 45.0%
TATCATCAGAGTAGGCCTCA+GGG - chr2_1:36001238-36001257 None:intergenic 45.0%
ATATCATCAGAGTAGGCCTC+AGG - chr2_1:36001239-36001258 None:intergenic 45.0%
GTTTGTGTACAGGGGTCAAT+GGG + chr2_1:36001600-36001619 Msa0206600:CDS 45.0%
TGGGGTGATTATGGTGCAAA+AGG + chr2_1:36001690-36001709 Msa0206600:CDS 45.0%
CTGCAACAGCAGAACCATAA+AGG - chr2_1:36001761-36001780 None:intergenic 45.0%
TTGAAGCAGCTACGTAGAAG+TGG - chr2_1:36001906-36001925 None:intergenic 45.0%
TGGCTCCTCAAAATGCTGTA+GGG + chr2_1:36002278-36002297 Msa0206600:CDS 45.0%
CACTAGAAGCAGGTAAATCC+TGG - chr2_1:36002911-36002930 None:intergenic 45.0%
CAGGATTTACCTGCTTCTAG+TGG + chr2_1:36002909-36002928 Msa0206600:intron 45.0%
AGGAACCCAGTATCCCATAA+TGG + chr2_1:36003101-36003120 Msa0206600:intron 45.0%
GGAACCCAGTATCCCATAAT+GGG + chr2_1:36003102-36003121 Msa0206600:intron 45.0%
AGCTCCCATTATGGGATACT+GGG - chr2_1:36003109-36003128 None:intergenic 45.0%
TACCTGAGAGCTCCCATTAT+GGG - chr2_1:36003117-36003136 None:intergenic 45.0%
TTACCTGAGAGCTCCCATTA+TGG - chr2_1:36003118-36003137 None:intergenic 45.0%
CAAAAGAGTAGAAGAGTCGC+CGG + chr2_1:36003426-36003445 Msa0206600:CDS 45.0%
AAAAGAGTAGAAGAGTCGCC+GGG + chr2_1:36003427-36003446 Msa0206600:CDS 45.0%
TCGGAGTTTGTAGTGCAACT+TGG + chr2_1:36003871-36003890 Msa0206600:three_prime_UTR 45.0%
CGGAGTTTGTAGTGCAACTT+GGG + chr2_1:36003872-36003891 Msa0206600:three_prime_UTR 45.0%
GGAGTTTGTAGTGCAACTTG+GGG + chr2_1:36003873-36003892 Msa0206600:three_prime_UTR 45.0%
AGTTCTTGAGGGGATGTAGG+AGG - chr2_1:35995909-35995928 None:intergenic 50.0%
TTCCACAAGCGAGCCATTGA+AGG + chr2_1:35996187-35996206 Msa0206600:CDS 50.0%
ATATCAGGTGCACCTGCATC+TGG + chr2_1:35996215-35996234 Msa0206600:CDS 50.0%
CTCGGTAGTACAATGAGCCA+AGG + chr2_1:35996311-35996330 Msa0206600:intron 50.0%
GCACACTCTCATGTAAGGTC+AGG + chr2_1:35996570-35996589 Msa0206600:intron 50.0%
GAGAACCACCAACCTCATTG+AGG + chr2_1:35996593-35996612 Msa0206600:intron 50.0%
TCAACACTGCCGATACAGGT+TGG - chr2_1:35997204-35997223 None:intergenic 50.0%
TAAGCTGCAGCCATGAAGGT+AGG + chr2_1:35997253-35997272 Msa0206600:intron 50.0%
AAGCTGCAGCCATGAAGGTA+GGG + chr2_1:35997254-35997273 Msa0206600:intron 50.0%
! GAGACTAGTCCCTACCTTCA+TGG - chr2_1:35997266-35997285 None:intergenic 50.0%
CTCTGTTCAAGGTGATGTGC+AGG - chr2_1:35997722-35997741 None:intergenic 50.0%
CTAAGAGCAGAAGTAGCAGC+TGG + chr2_1:35998222-35998241 Msa0206600:CDS 50.0%
GTTCATGAATGCTGGTCGCT+TGG + chr2_1:35998272-35998291 Msa0206600:CDS 50.0%
! GATTCTCCCTGGTGCCAATT+TGG - chr2_1:35998882-35998901 None:intergenic 50.0%
GAATCGAACCTGAGACCTTG+AGG + chr2_1:35998897-35998916 Msa0206600:intron 50.0%
!! TGGCCTGGTGGTATTGACTT+GGG - chr2_1:35998941-35998960 None:intergenic 50.0%
ATCTCTTAACCCACTTGGGC+TGG - chr2_1:35998961-35998980 None:intergenic 50.0%
! TCGACAGATGCGTTGGTAGA+AGG + chr2_1:35999200-35999219 Msa0206600:CDS 50.0%
GCCCAGTGTTATATCCACGA+AGG - chr2_1:35999374-35999393 None:intergenic 50.0%
!! GCTTGCCCCTTTTTCATACC+AGG - chr2_1:36000480-36000499 None:intergenic 50.0%
ACACAGAGGGCCATCAATGA+TGG + chr2_1:36000722-36000741 Msa0206600:CDS 50.0%
ATCATCAGAGTAGGCCTCAG+GGG - chr2_1:36001237-36001256 None:intergenic 50.0%
TGTCCTGCAGGTTTGTGTAC+AGG + chr2_1:36001590-36001609 Msa0206600:intron 50.0%
GTCCTGCAGGTTTGTGTACA+GGG + chr2_1:36001591-36001610 Msa0206600:intron 50.0%
TCCTGCAGGTTTGTGTACAG+GGG + chr2_1:36001592-36001611 Msa0206600:intron 50.0%
GGTTTGTGTACAGGGGTCAA+TGG + chr2_1:36001599-36001618 Msa0206600:intron 50.0%
GGAATGCCATTACAGCTTGC+TGG + chr2_1:36001639-36001658 Msa0206600:CDS 50.0%
CGACTTCCAGCAAGCTGTAA+TGG - chr2_1:36001648-36001667 None:intergenic 50.0%
GTGGCTCCTCAAAATGCTGT+AGG + chr2_1:36002277-36002296 Msa0206600:CDS 50.0%
CTCATAACTGAGGACTGAGC+AGG + chr2_1:36002660-36002679 Msa0206600:intron 50.0%
AGCAGGCATCATGATCTGCA+TGG + chr2_1:36002677-36002696 Msa0206600:intron 50.0%
GAGCTCCCATTATGGGATAC+TGG - chr2_1:36003110-36003129 None:intergenic 50.0%
! ATCCCATAATGGGAGCTCTC+AGG + chr2_1:36003112-36003131 Msa0206600:intron 50.0%
ATGGGAGCTCTCAGGTAAGA+TGG + chr2_1:36003120-36003139 Msa0206600:intron 50.0%
TAGGGCGCGAGAAACTCATA+GGG - chr2_1:36003190-36003209 None:intergenic 50.0%
ATAGGGCGCGAGAAACTCAT+AGG - chr2_1:36003191-36003210 None:intergenic 50.0%
TGAGTTTCTCGCGCCCTATT+CGG + chr2_1:36003192-36003211 Msa0206600:intron 50.0%
CTCGCGCGCTTTATGCAATT+CGG - chr2_1:36003292-36003311 None:intergenic 50.0%
AGTAGGCCTTTCAGGAAAGG+TGG - chr2_1:36003476-36003495 None:intergenic 50.0%
CACAGTAGGCCTTTCAGGAA+AGG - chr2_1:36003479-36003498 None:intergenic 50.0%
CTTTCCTGAAAGGCCTACTG+TGG + chr2_1:36003477-36003496 Msa0206600:CDS 50.0%
TCATCCACAGTAGGCCTTTC+AGG - chr2_1:36003484-36003503 None:intergenic 50.0%
GAGCCCCTGCACAAGAAAAT+AGG - chr2_1:36003749-36003768 None:intergenic 50.0%
GTTTGTAGTGCAACTTGGGG+TGG + chr2_1:36003876-36003895 Msa0206600:three_prime_UTR 50.0%
GATGTAGGAGGAAGAGGGTG+TGG - chr2_1:35995897-35995916 None:intergenic 55.0%
GAGGGGATGTAGGAGGAAGA+GGG - chr2_1:35995902-35995921 None:intergenic 55.0%
TGAGGGGATGTAGGAGGAAG+AGG - chr2_1:35995903-35995922 None:intergenic 55.0%
CACCTTCAATGGCTCGCTTG+TGG - chr2_1:35996192-35996211 None:intergenic 55.0%
TGAGTTCCCTTGCCAGATGC+AGG - chr2_1:35996230-35996249 None:intergenic 55.0%
TTGGCAGGCAATGAGGCTTG+TGG - chr2_1:35996775-35996794 None:intergenic 55.0%
GTCTCAGGTTCGATTCTCCC+TGG - chr2_1:35998893-35998912 None:intergenic 55.0%
GTGCTCTTCCTCAAGGTCTC+AGG - chr2_1:35998908-35998927 None:intergenic 55.0%
! CTTGAGGAAGAGCACACTCC+CGG + chr2_1:35998913-35998932 Msa0206600:intron 55.0%
! TTGAGGAAGAGCACACTCCC+GGG + chr2_1:35998914-35998933 Msa0206600:intron 55.0%
!! GTGGTATTGACTTGGGACCC+GGG - chr2_1:35998934-35998953 None:intergenic 55.0%
!! GGTGGTATTGACTTGGGACC+CGG - chr2_1:35998935-35998954 None:intergenic 55.0%
GGTCCCAAGTCAATACCACC+AGG + chr2_1:35998935-35998954 Msa0206600:intron 55.0%
!! CTGGCCTGGTGGTATTGACT+TGG - chr2_1:35998942-35998961 None:intergenic 55.0%
GGGGCAAGCATCTTTGATCC+AGG + chr2_1:36000491-36000510 Msa0206600:CDS 55.0%
!! GTCGGTGTCGGACACTAACA+CGG - chr2_1:36000974-36000993 None:intergenic 55.0%
ACCCCTGTACACAAACCTGC+AGG - chr2_1:36001596-36001615 None:intergenic 55.0%
GTACAGGGGTCAATGGGAGA+AGG + chr2_1:36001606-36001625 Msa0206600:CDS 55.0%
!! ATGGGAGAAGGTGCTCTTGC+TGG + chr2_1:36001618-36001637 Msa0206600:CDS 55.0%
TCTAATGTCAGGTGCAGCGG+AGG + chr2_1:36002225-36002244 Msa0206600:intron 55.0%
GCGCGAGAAACTCATAGGGT+GGG - chr2_1:36003186-36003205 None:intergenic 55.0%
AGGTGCACCTGCATCTGGCA+AGG + chr2_1:35996220-35996239 Msa0206600:CDS 60.0%
GGTGCACCTGCATCTGGCAA+GGG + chr2_1:35996221-35996240 Msa0206600:CDS 60.0%
AACCCGCCCAAATTGGCACC+AGG + chr2_1:35998872-35998891 Msa0206600:intron 60.0%
ACCCGCCCAAATTGGCACCA+GGG + chr2_1:35998873-35998892 Msa0206600:intron 60.0%
! TCCCTGGTGCCAATTTGGGC+GGG - chr2_1:35998877-35998896 None:intergenic 60.0%
! CTCCCTGGTGCCAATTTGGG+CGG - chr2_1:35998878-35998897 None:intergenic 60.0%
! CGGGAGTGTGCTCTTCCTCA+AGG - chr2_1:35998915-35998934 None:intergenic 60.0%
!! TTAACCCACTTGGGCTGGCC+TGG - chr2_1:35998956-35998975 None:intergenic 60.0%
TGGTCTGTGTTCGGCAGCAG+TGG - chr2_1:36002493-36002512 None:intergenic 60.0%
GGCGCGAGAAACTCATAGGG+TGG - chr2_1:36003187-36003206 None:intergenic 60.0%
AAAGCGCGCGAGAACCTCGT+AGG + chr2_1:36003300-36003319 Msa0206600:intron 60.0%
AAGCGCGCGAGAACCTCGTA+GGG + chr2_1:36003301-36003320 Msa0206600:intron 60.0%
TTGTGCAGGGGCTCGTTGAG+TGG + chr2_1:36003755-36003774 Msa0206600:intron 60.0%
TACCACCAGGCCAGCCCAAG+TGG + chr2_1:35998948-35998967 Msa0206600:intron 65.0%
ACCACCAGGCCAGCCCAAGT+GGG + chr2_1:35998949-35998968 Msa0206600:intron 65.0%
!! ACCCACTTGGGCTGGCCTGG+TGG - chr2_1:35998953-35998972 None:intergenic 70.0%
CGCGCGAGAACCTCGTAGGG+TGG + chr2_1:36003304-36003323 Msa0206600:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 35995804 36004145 35995804 ID=Msa0206600;Name=Msa0206600
chr2_1 mRNA 35995804 36004145 35995804 ID=Msa0206600-mRNA-1;Parent=Msa0206600;Name=Msa0206600-mRNA-1;_AED=0.12;_eAED=0.12;_QI=80|0.94|0.94|1|1|1|19|355|578
chr2_1 exon 35995804 35996069 35995804 ID=Msa0206600-mRNA-1:exon:11856;Parent=Msa0206600-mRNA-1
chr2_1 exon 35996164 35996271 35996164 ID=Msa0206600-mRNA-1:exon:11857;Parent=Msa0206600-mRNA-1
chr2_1 exon 35998189 35998317 35998189 ID=Msa0206600-mRNA-1:exon:11858;Parent=Msa0206600-mRNA-1
chr2_1 exon 35998424 35998558 35998424 ID=Msa0206600-mRNA-1:exon:11859;Parent=Msa0206600-mRNA-1
chr2_1 exon 35999181 35999327 35999181 ID=Msa0206600-mRNA-1:exon:11860;Parent=Msa0206600-mRNA-1
chr2_1 exon 35999859 35999933 35999859 ID=Msa0206600-mRNA-1:exon:11861;Parent=Msa0206600-mRNA-1
chr2_1 exon 36000024 36000120 36000024 ID=Msa0206600-mRNA-1:exon:11862;Parent=Msa0206600-mRNA-1
chr2_1 exon 36000466 36000512 36000466 ID=Msa0206600-mRNA-1:exon:11863;Parent=Msa0206600-mRNA-1
chr2_1 exon 36000632 36000760 36000632 ID=Msa0206600-mRNA-1:exon:11864;Parent=Msa0206600-mRNA-1
chr2_1 exon 36001289 36001324 36001289 ID=Msa0206600-mRNA-1:exon:11865;Parent=Msa0206600-mRNA-1
chr2_1 exon 36001396 36001476 36001396 ID=Msa0206600-mRNA-1:exon:11866;Parent=Msa0206600-mRNA-1
chr2_1 exon 36001600 36001738 36001600 ID=Msa0206600-mRNA-1:exon:11867;Parent=Msa0206600-mRNA-1
chr2_1 exon 36002236 36002315 36002236 ID=Msa0206600-mRNA-1:exon:11868;Parent=Msa0206600-mRNA-1
chr2_1 exon 36002474 36002539 36002474 ID=Msa0206600-mRNA-1:exon:11869;Parent=Msa0206600-mRNA-1
chr2_1 exon 36002912 36002941 36002912 ID=Msa0206600-mRNA-1:exon:11870;Parent=Msa0206600-mRNA-1
chr2_1 exon 36003024 36003079 36003024 ID=Msa0206600-mRNA-1:exon:11871;Parent=Msa0206600-mRNA-1
chr2_1 exon 36003396 36003533 36003396 ID=Msa0206600-mRNA-1:exon:11872;Parent=Msa0206600-mRNA-1
chr2_1 exon 36003626 36003655 36003626 ID=Msa0206600-mRNA-1:exon:11873;Parent=Msa0206600-mRNA-1
chr2_1 exon 36003763 36004145 36003763 ID=Msa0206600-mRNA-1:exon:11874;Parent=Msa0206600-mRNA-1
chr2_1 five_prime_UTR 35995804 35995883 35995804 ID=Msa0206600-mRNA-1:five_prime_utr;Parent=Msa0206600-mRNA-1
chr2_1 CDS 35995884 35996069 35995884 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 35996164 35996271 35996164 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 35998189 35998317 35998189 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 35998424 35998558 35998424 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 35999181 35999327 35999181 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 35999859 35999933 35999859 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36000024 36000120 36000024 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36000466 36000512 36000466 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36000632 36000760 36000632 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36001289 36001324 36001289 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36001396 36001476 36001396 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36001600 36001738 36001600 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36002236 36002315 36002236 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36002474 36002539 36002474 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36002912 36002941 36002912 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36003024 36003079 36003024 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36003396 36003533 36003396 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36003626 36003655 36003626 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 CDS 36003763 36003790 36003763 ID=Msa0206600-mRNA-1:cds;Parent=Msa0206600-mRNA-1
chr2_1 three_prime_UTR 36003791 36004145 36003791 ID=Msa0206600-mRNA-1:three_prime_utr;Parent=Msa0206600-mRNA-1
Gene Sequence

>Msa0206600

ATGTTGCACACCACACCCTCTTCCTCCTACATCCCCTCAAGAACTCTTCTTCCTCATTCTCTTTTATTTTCTTCTTCTATTTCTTCTCATCAGCCATGTCTACTTCTCCAACACCACAACTTTAACTCTCAATATCTTCACTTAACCAACTTCAGCAGACATGCCAATTTGCCATTAAGACCCAAGGCAACAAGAAAGGTGATAAATTGTTCCACAAGCGAGCCATTGAAGGTGATGATATCAGGTGCACCTGCATCTGGCAAGGGAACTCAATGTGAATTGATTGTTAATAAGTATGGATTAGTGCACATATCAACTGGGGACTTGCTAAGAGCAGAAGTAGCAGCTGGAACAGAAATAGGAAAGAAAGCAAAAGAGTTCATGAATGCTGGTCGCTTGGTTCCTGATGAAATTGTGACAGCTATGGTGGCAGCACGGTTGTCTTGCGAAGATGTTAAGCAAAAAGGGTGGCTTCTTGACGGTTACCCTCGTAGTTTATCCCAAGCTGAAAGTCTAGAGAAAATGCAGATACGACCTGATGTGTATATCGTATTAGATGTTCATGATGAAATTCTGATCGACAGATGCGTTGGTAGAAGGTTAGATCCAGTAACTGGCAAGATCTATCATGAGAAATTTTTTCCGCCGGAGACAGAAGAAATCAAAGCAAGGCTAGTAACTCGTCCTGATGACACTGAAGAAAAAGTTATGTCACGCCTAAATATCTATAAGCAAAATGCAGAATCAGTATCTTCCTCTTACTCAAACATAACAAATAAGATTGATGGAAGCCGTCCAAAAGAAGAAGTTTTCAAAGATATTGAATCTTTATTATCTCAATTGCAACAAAATAGAGTGAAAATAGTGAAATCTGGAGAAAAACCGATTCCTGGTATGAAAAAGGGGCAAGCATCTTTGATCCAGGATAAATGGAGAGGAATACCTACTAGACTAAATAACATTCCCCATTCTCGAGAAATGAGGAAATATTTCTATGATGATGTGCTACTAGCTACACAGAGGGCCATCAATGATGGAAAAACTAGGTTAAAGGTTGACATCAACATTCCTGAACTGAATCCAGAAATGGATGTTTATCGAATTGGTACACTGTTGGAACTTATTCGATCTCTTGCACTTTCATTTGCCAATGATGGAAAACGTGTAAAGGTTTGTGTACAGGGGTCAATGGGAGAAGGTGCTCTTGCTGGAATGCCATTACAGCTTGCTGGAAGTCGAAAGATTTTAGAATTCATGGATTGGGGTGATTATGGTGCAAAAGGAACCTTCATCAACATTGGTTCCATAGGTGCAGCGGAGGTTGAAGAGCAAGATGACATGTATTTCTTGGTGGCTCCTCAAAATGCTGTAGGGAATTGTATTATTGATGATTTAAAGGCAATGACCACTGCTGCCGAACACAGACCAGTTATCCTAATCAATGCTAAGCTTAAGGATTTACCTGCTTCTAGTGGTATTATGCAAACAATGGGGCGAGACAAAAGACTCGAGTATTCAGCATCATTTGAAAGTTGCTACTTGATGTCTTATCCATACCGTTATGAGCTGTACAAAAGAGTAGAAGAGTCGCCGGGAAAAGAGAAGTATGTACTTTTGTCCACCTTTCCTGAAAGGCCTACTGTGGATGAAATTAATGATTCCTTTGAAGGAAAACCAAGAAATGAAACCAAGAAATCATCAGGGTTTTGGGGCTCGTTGAGTGGCATGTTTTTTTGA
Protein sequence

>Msa0206600

MLHTTPSSSYIPSRTLLPHSLLFSSSISSHQPCLLLQHHNFNSQYLHLTNFSRHANLPLRPKATRKVINCSTSEPLKVMISGAPASGKGTQCELIVNKYGLVHISTGDLLRAEVAAGTEIGKKAKEFMNAGRLVPDEIVTAMVAARLSCEDVKQKGWLLDGYPRSLSQAESLEKMQIRPDVYIVLDVHDEILIDRCVGRRLDPVTGKIYHEKFFPPETEEIKARLVTRPDDTEEKVMSRLNIYKQNAESVSSSYSNITNKIDGSRPKEEVFKDIESLLSQLQQNRVKIVKSGEKPIPGMKKGQASLIQDKWRGIPTRLNNIPHSREMRKYFYDDVLLATQRAINDGKTRLKVDINIPELNPEMDVYRIGTLLELIRSLALSFANDGKRVKVCVQGSMGEGALAGMPLQLAGSRKILEFMDWGDYGAKGTFINIGSIGAAEVEEQDDMYFLVAPQNAVGNCIIDDLKAMTTAAEHRPVILINAKLKDLPASSGIMQTMGRDKRLEYSASFESCYLMSYPYRYELYKRVEESPGKEKYVLLSTFPERPTVDEINDSFEGKPRNETKKSSGFWGSLSGMFF*