AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0834160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0834160 MtrunA17_Chr5g0399661 96.970 396 12 0 1 396 1 396 0.0 793
Msa0834160 MtrunA17_Chr5g0399671 86.967 399 45 4 3 394 1 399 0.0 693
Msa0834160 MtrunA17_Chr1g0211181 41.918 365 202 5 38 394 8 370 1.52e-90 279
Msa0834160 MtrunA17_Chr1g0211141 41.209 364 205 4 39 394 2 364 1.14e-81 256
Msa0834160 MtrunA17_Chr1g0197161 39.730 370 210 5 37 394 4 372 1.95e-77 245
Msa0834160 MtrunA17_Chr1g0211171 40.000 365 203 5 42 391 9 372 5.04e-76 241
Msa0834160 MtrunA17_Chr1g0211151 37.500 368 217 5 36 391 3 369 3.40e-66 216
Msa0834160 MtrunA17_Chr8g0375081 27.100 369 234 14 34 379 75 431 1.84e-23 102
Msa0834160 MtrunA17_Chr4g0018001 27.586 203 137 3 201 393 2 204 1.94e-22 95.5
Msa0834160 MtrunA17_Chr4g0010391 29.231 260 169 9 139 393 166 415 3.56e-22 98.2
Msa0834160 MtrunA17_Chr4g0017991 36.842 152 75 2 38 188 5 136 5.90e-22 92.4
Msa0834160 MtrunA17_Chr5g0402211 27.500 360 228 15 42 379 78 426 3.38e-21 95.9
Msa0834160 MtrunA17_Chr4g0017951 52.632 76 35 1 34 109 2 76 2.15e-19 82.0
Msa0834160 MtrunA17_Chr1g0148881 23.797 395 246 12 38 394 6 383 3.78e-12 67.4
Msa0834160 MtrunA17_Chr4g0017981 30.328 122 79 1 279 394 4 125 6.88e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0834160 AT2G35660.1 73.259 359 96 0 38 396 43 401 0.0 565
Msa0834160 AT2G29720.1 65.889 343 117 0 52 394 55 397 4.74e-175 495
Msa0834160 AT2G35660.2 72.125 287 80 0 110 396 1 287 1.80e-159 452
Msa0834160 AT2G35660.3 72.125 287 80 0 110 396 1 287 1.80e-159 452
Msa0834160 AT5G05320.1 35.150 367 223 3 40 394 7 370 8.63e-77 244
Msa0834160 AT4G38540.1 34.973 366 223 3 42 394 9 372 4.24e-70 226
Msa0834160 AT4G15760.1 32.782 363 214 11 50 394 39 389 2.20e-49 172
Msa0834160 AT4G15760.2 31.806 371 219 10 50 394 39 401 1.62e-48 171
Msa0834160 AT4G15765.1 26.578 301 171 5 42 335 6 263 4.45e-24 100
Msa0834160 AT5G67030.2 27.729 339 211 14 38 356 79 403 8.15e-23 100
Msa0834160 AT5G67030.1 27.729 339 211 14 38 356 79 403 8.84e-23 100
Msa0834160 AT5G11330.1 23.018 391 253 10 38 394 4 380 5.81e-12 67.4

Find 156 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATACCTTATTGGAATTCT+TGG 0.212200 5_4:+7188417 Msa0834160:CDS
AGATTGAGCCTTGATTAATT+TGG 0.234422 5_4:-7187333 None:intergenic
ATGTCTAAACAGATTGTAAT+AGG 0.240740 5_4:+7188728 Msa0834160:intron
CGATTACAACATGTTCCTTT+TGG 0.248040 5_4:-7187361 None:intergenic
AGAAATACCATGACCATTAT+AGG 0.249032 5_4:+7189697 Msa0834160:three_prime_UTR
TCCAAATGGGGATACCTTAT+TGG 0.254372 5_4:+7188408 Msa0834160:CDS
TGCCCAAGATTTGGAGTCAT+TGG 0.307226 5_4:-7189251 None:intergenic
CATGCTCCTTGCCCAAGATT+TGG 0.307845 5_4:-7189260 None:intergenic
TTCATTATGTTTAGTAGCTC+TGG 0.317013 5_4:-7189113 None:intergenic
TGAATATTGTGTATATATTC+AGG 0.322784 5_4:-7189662 None:intergenic
ATCCTCTTCTTTGAAATTGA+AGG 0.328744 5_4:-7187800 None:intergenic
TAGACTTTGGTTGGAGAAAC+AGG 0.332821 5_4:-7188914 None:intergenic
CACCCAATGACTCCAAATCT+TGG 0.340691 5_4:+7189248 Msa0834160:CDS
AGTGGAGAGGAGGGTACTTT+TGG 0.353165 5_4:+7188315 Msa0834160:CDS
GTGTGTTGTGTGTTCAGCTT+TGG 0.355220 5_4:-7187160 None:intergenic
CCAACTTGTCATACCAGAAT+TGG 0.356587 5_4:+7187296 Msa0834160:CDS
TCCAATAAGGTATCCCCATT+TGG 0.359215 5_4:-7188409 None:intergenic
ATCGTGGGTGGTGGCATTGC+AGG 0.363319 5_4:+7187380 Msa0834160:CDS
TCTCCACTGCACGCACCTCT+TGG 0.364886 5_4:-7188300 None:intergenic
CTAGCACTTATAAAGTTATA+TGG 0.373084 5_4:+7189769 Msa0834160:three_prime_UTR
GCCCAAGATTTGGAGTCATT+GGG 0.380043 5_4:-7189250 None:intergenic
TTGTTGTGATTTCAAGAGTT+GGG 0.381370 5_4:+7189588 Msa0834160:three_prime_UTR
CCCATCCAAGAATTCCAATA+AGG 0.383303 5_4:-7188422 None:intergenic
CTAAGGATCTAGTGGAAAAC+TGG 0.384760 5_4:+7189087 Msa0834160:CDS
GTGAATTACATCTACGGAAA+AGG 0.386225 5_4:+7188872 Msa0834160:CDS
TGTGTTGTGTGTTCAGCTTT+GGG 0.390962 5_4:-7187159 None:intergenic
ACTTCTGAGAGCTCCAATTC+TGG 0.395076 5_4:-7187309 None:intergenic
ATTAAGTTTATATCCTATAA+TGG 0.396976 5_4:-7189710 None:intergenic
TCTTTATTTAACCTAATGAT+TGG 0.399120 5_4:+7189801 Msa0834160:three_prime_UTR
AGTAAGGCTTGGTCCATTGC+TGG 0.401844 5_4:+7189497 Msa0834160:three_prime_UTR
TGGTGTTCGGTCTCTTGTGC+TGG 0.403207 5_4:+7187514 Msa0834160:CDS
TAGCTGTATGTATCCAAATA+TGG 0.404062 5_4:-7189749 None:intergenic
TATAATCAGGACTCCGTTGA+TGG 0.407537 5_4:+7189154 Msa0834160:CDS
GAATTCTCAGGCTTGGTGTT+CGG 0.408757 5_4:+7187501 Msa0834160:intron
GAAGAATATTGAATGCTATC+AGG 0.408814 5_4:-7188361 None:intergenic
ATAGCATTCAATATTCTTCA+CGG 0.412492 5_4:+7188365 Msa0834160:CDS
CACTCCACCCATTCTTGAAA+AGG 0.414267 5_4:-7187577 None:intergenic
CATAGCACAAGCCAATCATT+AGG 0.414589 5_4:-7189812 None:intergenic
ATGTTTGCCCGTATGGTTAG+TGG 0.417439 5_4:-7189404 None:intergenic
CGTTGATGGATCGATGGCTT+TGG 0.417946 5_4:+7189168 Msa0834160:CDS
AAAAGGTTGTCCATCTGAAT+AGG 0.421657 5_4:-7188840 None:intergenic
ACGGGCAAACATTGTGGGTT+CGG 0.430334 5_4:+7189415 Msa0834160:CDS
ACCCACAATGTTTGCCCGTA+TGG 0.441085 5_4:-7189411 None:intergenic
TGTGGGTTCGGCTTTGCAAT+GGG 0.445153 5_4:+7189427 Msa0834160:CDS
TTGTCATACCTAAGCTAGTA+AGG 0.446445 5_4:+7189481 Msa0834160:three_prime_UTR
ATTTGGAGTCATTGGGTGCC+AGG 0.447196 5_4:-7189243 None:intergenic
AAGATTGAACCAAGTCCAAA+TGG 0.447760 5_4:+7188394 Msa0834160:CDS
ACTCAATATTTAGAAATTCA+AGG 0.453429 5_4:+7187635 Msa0834160:CDS
AAGGTATCCCCATTTGGACT+TGG 0.464282 5_4:-7188403 None:intergenic
ACAACTCTACCTGCAGAAAC+AGG 0.465698 5_4:-7189206 None:intergenic
TAATTCACCCGTGCTTCAAA+AGG 0.468928 5_4:-7188857 None:intergenic
ACCTTATTGGAATTCTTGGA+TGG 0.470171 5_4:+7188421 Msa0834160:CDS
TTTCTCCAACCAAAGTCTAC+TGG 0.470585 5_4:+7188918 Msa0834160:CDS
CAACTGCTCTATCCCTTCAC+AGG 0.470796 5_4:+7187408 Msa0834160:CDS
TGTCTAAACAGATTGTAATA+GGG 0.475468 5_4:+7188729 Msa0834160:intron
TGCCTTCAATTTCAAAGAAG+AGG 0.476217 5_4:+7187798 Msa0834160:CDS
TGCTTCAACAGTTCATCTCC+AGG 0.477142 5_4:+7188947 Msa0834160:CDS
GGCTCAATCTTCAGTCCAAA+AGG 0.477210 5_4:+7187346 Msa0834160:CDS
GGACCAAGCCTTACTAGCTT+AGG 0.477240 5_4:-7189489 None:intergenic
CACCGGATGACACTATAATC+AGG 0.478910 5_4:+7189141 Msa0834160:CDS
TGAATTACATCTACGGAAAA+GGG 0.482581 5_4:+7188873 Msa0834160:CDS
ACCCAATGACTCCAAATCTT+GGG 0.482693 5_4:+7189249 Msa0834160:CDS
TGGAGTGTACTTGATTCAAT+TGG 0.482722 5_4:+7187593 Msa0834160:CDS
ACCCGCTGGTGTGTTCTGTT+AGG 0.482853 5_4:+7189451 Msa0834160:CDS
ACCATACGGGCAAACATTGT+GGG 0.483763 5_4:+7189410 Msa0834160:CDS
AGGTGCGTGCAGTGGAGAGG+AGG 0.485424 5_4:+7188305 Msa0834160:CDS
GCTTGCTTCTTTAGCACCGA+TGG 0.486635 5_4:-7189065 None:intergenic
CTTCTTTAGCACCGATGGCT+CGG 0.487707 5_4:-7189060 None:intergenic
AATCATTAGGTTAAATAAAG+AGG 0.488615 5_4:-7189799 None:intergenic
AGATTGAACCAAGTCCAAAT+GGG 0.490772 5_4:+7188395 Msa0834160:CDS
GCACAATGACCAACAAACTT+TGG 0.492071 5_4:-7188800 None:intergenic
CAGAAGTTCCAAATTAATCA+AGG 0.492791 5_4:+7187325 Msa0834160:CDS
ATTGTTGTGATTTCAAGAGT+TGG 0.493147 5_4:+7189587 Msa0834160:three_prime_UTR
GAGAATATGGCAATGAAAGA+TGG 0.497368 5_4:+7189369 Msa0834160:CDS
CATTCAATATTCTTCACGGT+TGG 0.499725 5_4:+7188369 Msa0834160:CDS
GAAACAGGTGGACTTATTGA+TGG 0.501429 5_4:-7189191 None:intergenic
TTGTGGGTTCGGCTTTGCAA+TGG 0.501673 5_4:+7189426 Msa0834160:CDS
TGATTGTAGCTACTAGCTAC+AGG 0.502883 5_4:-7187209 None:intergenic
GCAGATAAACCAGTAGACTT+TGG 0.503117 5_4:-7188927 None:intergenic
CAGTCAGAGTCACTTCGAAC+AGG 0.503637 5_4:+7187539 Msa0834160:CDS
CTCAATATTTAGAAATTCAA+GGG 0.504248 5_4:+7187636 Msa0834160:CDS
ATAAACCAGTAGACTTTGGT+TGG 0.504282 5_4:-7188923 None:intergenic
CCAATTCTGGTATGACAAGT+TGG 0.517736 5_4:-7187296 None:intergenic
AACCATACGGGCAAACATTG+TGG 0.523320 5_4:+7189409 Msa0834160:CDS
GCCACATAAACTAGTGGTAG+TGG 0.528026 5_4:-7187137 None:intergenic
ATAAGTCCACCTGTTTCTGC+AGG 0.528684 5_4:+7189197 Msa0834160:CDS
GCATATTTCCACTAACCATA+CGG 0.529804 5_4:+7189396 Msa0834160:CDS
GTCCTGATTATAGTGTCATC+CGG 0.533366 5_4:-7189143 None:intergenic
TCCACTACCACTAGTTTATG+TGG 0.536288 5_4:+7187136 Msa0834160:five_prime_UTR
TCCTAACAGAACACACCAGC+GGG 0.539378 5_4:-7189452 None:intergenic
CCTTATTGGAATTCTTGGAT+GGG 0.539919 5_4:+7188422 Msa0834160:CDS
AGGAGCATGTTGTGCTCTTG+AGG 0.544378 5_4:+7189274 Msa0834160:CDS
GTATATATTCAGGTATACAT+AGG 0.544796 5_4:-7189652 None:intergenic
GCAGGTAGAGTTGTACTCGT+TGG 0.545159 5_4:+7189215 Msa0834160:CDS
GAAGCAAGCTAAGGATCTAG+TGG 0.546205 5_4:+7189079 Msa0834160:CDS
TTGTACTCGTTGGAGACGCC+TGG 0.546377 5_4:+7189225 Msa0834160:CDS
TCCTAAAATAACCGAGCCAT+CGG 0.546688 5_4:+7189049 Msa0834160:CDS
AAGAGGTGCGTGCAGTGGAG+AGG 0.550530 5_4:+7188302 Msa0834160:CDS
ACTCCACCCATTCTTGAAAA+GGG 0.552204 5_4:-7187576 None:intergenic
TGTTGTGATTTCAAGAGTTG+GGG 0.553078 5_4:+7189589 Msa0834160:three_prime_UTR
CAGATTGTAATAGGGTGCGA+TGG 0.556706 5_4:+7188737 Msa0834160:intron
CAGCCAAGAGGTGCGTGCAG+TGG 0.558479 5_4:+7188297 Msa0834160:intron
TATTCAGGTATACATAGGGT+GGG 0.560382 5_4:-7189647 None:intergenic
TTTATATCCTATAATGGTCA+TGG 0.560462 5_4:-7189704 None:intergenic
GTCTACAAAGATGAAAATCA+AGG 0.561028 5_4:+7189544 Msa0834160:three_prime_UTR
AAATTAGTGTGCTCCAGCAA+TGG 0.570234 5_4:-7189510 None:intergenic
AGACGAGGTTGTTGTAGCCA+TGG 0.572720 5_4:-7187255 None:intergenic
AAGGAACATGTTGTAATCGT+GGG 0.573031 5_4:+7187365 Msa0834160:CDS
AAAGGAACATGTTGTAATCG+TGG 0.573135 5_4:+7187364 Msa0834160:CDS
TATATATTCAGGTATACATA+GGG 0.573689 5_4:-7189651 None:intergenic
GGACTTGCCTCCTATTCAGA+TGG 0.575892 5_4:+7188830 Msa0834160:CDS
GCACGGGTGAATTACATCTA+CGG 0.577218 5_4:+7188866 Msa0834160:CDS
TGGGTCTAAACTAGTTGCAA+AGG 0.577733 5_4:+7188441 Msa0834160:CDS
AAGGCTGACAACACAATGAA+AGG 0.579807 5_4:+7189563 Msa0834160:three_prime_UTR
ATTTCAAAGAAGAGGATGAA+AGG 0.580176 5_4:+7187806 Msa0834160:CDS
ATTATGTTTAGTAGCTCTGG+AGG 0.585207 5_4:-7189110 None:intergenic
AATCCCATCCACTTAGCTAT+CGG 0.586271 5_4:-7188770 None:intergenic
GGTGCGTGCAGTGGAGAGGA+GGG 0.589579 5_4:+7188306 Msa0834160:CDS
ATCACCGATAGCTAAGTGGA+TGG 0.589651 5_4:+7188766 Msa0834160:CDS
ATTCAGGTATACATAGGGTG+GGG 0.591010 5_4:-7189646 None:intergenic
CATATTTCCACTAACCATAC+GGG 0.594920 5_4:+7189397 Msa0834160:CDS
ATGACTCCAAATCTTGGGCA+AGG 0.595031 5_4:+7189254 Msa0834160:CDS
AGGTTGTCCATCTGAATAGG+AGG 0.597237 5_4:-7188837 None:intergenic
TACGGAAAAGGGTTACGCGC+AGG 0.600680 5_4:+7188884 Msa0834160:CDS
GTTGGTCATTGTGCTTTCCG+TGG 0.600904 5_4:+7188809 Msa0834160:CDS
CATGTTGTAATCGTGGGTGG+TGG 0.604156 5_4:+7187371 Msa0834160:CDS
GGACTCCGTTGATGGATCGA+TGG 0.604470 5_4:+7189162 Msa0834160:CDS
AAACATAATGAATTCTACAC+CGG 0.605859 5_4:+7189124 Msa0834160:CDS
TTGTGCTCTTGAGGATGCAG+TGG 0.611787 5_4:+7189283 Msa0834160:CDS
ATATTCAGGTATACATAGGG+TGG 0.615654 5_4:-7189648 None:intergenic
TTCGATCACCGATAGCTAAG+TGG 0.615756 5_4:+7188762 Msa0834160:CDS
TCAGAGTCACTTCGAACAGG+TGG 0.621486 5_4:+7187542 Msa0834160:CDS
CAAAGCCATCGATCCATCAA+CGG 0.623139 5_4:-7189167 None:intergenic
ATCTGAATTGAACATGTCCA+TGG 0.625416 5_4:+7187238 Msa0834160:exon
CTAGAGTTGAAACCTGTGAA+GGG 0.625644 5_4:-7187420 None:intergenic
TCACCGATAGCTAAGTGGAT+GGG 0.628133 5_4:+7188767 Msa0834160:CDS
GGTGCTAAAGAAGCAAGCTA+AGG 0.629803 5_4:+7189070 Msa0834160:CDS
GCTAGAGTTGAAACCTGTGA+AGG 0.639052 5_4:-7187421 None:intergenic
GCTTTGCAATGGGAACCCGC+TGG 0.639159 5_4:+7189437 Msa0834160:CDS
GATTGAACCAAGTCCAAATG+GGG 0.644561 5_4:+7188396 Msa0834160:CDS
ACGGATATTGTGCAGCCAAG+AGG 0.645003 5_4:+7188285 Msa0834160:intron
ACAATCTCGCCACCACTCAA+CGG 0.649290 5_4:+7187181 Msa0834160:five_prime_UTR
CTGAATAGGAGGCAAGTCCA+CGG 0.650582 5_4:-7188826 None:intergenic
CTTTGGGCCACATAAACTAG+TGG 0.652515 5_4:-7187143 None:intergenic
ATGGTGGTGAAGTCTGAGGA+TGG 0.653495 5_4:+7187763 Msa0834160:CDS
GAATATTGAATGCTATCAGG+AGG 0.654073 5_4:-7188358 None:intergenic
CTACAGGTATTACCGTTGAG+TGG 0.663266 5_4:-7187193 None:intergenic
GAAGGGATAGAGCAGTTGCA+AGG 0.666482 5_4:-7187403 None:intergenic
ATATCAGCTGTACAGGATGG+TGG 0.671683 5_4:+7187747 Msa0834160:intron
ACTCTACCTGCAGAAACAGG+TGG 0.672264 5_4:-7189203 None:intergenic
CAGGATGGTGGTGAAGTCTG+AGG 0.679338 5_4:+7187759 Msa0834160:intron
TTTAAGAATCATAAAAGACG+AGG 0.685989 5_4:-7187270 None:intergenic
CAGGTATTACCGTTGAGTGG+TGG 0.692975 5_4:-7187190 None:intergenic
TTCCTAACAGAACACACCAG+CGG 0.695061 5_4:-7189453 None:intergenic
ATGGTTAGTGGAAATATGCG+CGG 0.713230 5_4:-7189392 None:intergenic
GAACATGTTGTAATCGTGGG+TGG 0.726429 5_4:+7187368 Msa0834160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTATTATCAAAGTTATTA+TGG - chr5_4:7187850-7187869 None:intergenic 15.0%
!! AATATTTATGAAATGCATAA+CGG + chr5_4:7188266-7188285 Msa0834160:intron 15.0%
!! TTGTAAATCTAATAAAATCA+TGG - chr5_4:7188517-7188536 None:intergenic 15.0%
!!! TTTTATTAGATTTACAAAGT+TGG + chr5_4:7188520-7188539 Msa0834160:intron 15.0%
!! ATTAAGTTTATATCCTATAA+TGG - chr5_4:7189713-7189732 None:intergenic 15.0%
!! ACTCAATATTTAGAAATTCA+AGG + chr5_4:7187635-7187654 Msa0834160:CDS 20.0%
!! CTCAATATTTAGAAATTCAA+GGG + chr5_4:7187636-7187655 Msa0834160:CDS 20.0%
!!! TTTTCACTTCTTAATACAAT+GGG - chr5_4:7188141-7188160 None:intergenic 20.0%
!!! TTTTTCACTTCTTAATACAA+TGG - chr5_4:7188142-7188161 None:intergenic 20.0%
!! TATTAAGAAGTGAAAAATTG+TGG + chr5_4:7188145-7188164 Msa0834160:intron 20.0%
!! ATTAAGAAGTGAAAAATTGT+GGG + chr5_4:7188146-7188165 Msa0834160:intron 20.0%
!! TTTCGTTGTTAAATTATTGT+TGG + chr5_4:7188240-7188259 Msa0834160:intron 20.0%
!!! TCAATTTGTTAACACTTTTT+AGG - chr5_4:7188704-7188723 None:intergenic 20.0%
!! TATATATTCAGGTATACATA+GGG - chr5_4:7189654-7189673 None:intergenic 20.0%
!! TGAATATTGTGTATATATTC+AGG - chr5_4:7189665-7189684 None:intergenic 20.0%
!!! GTATTGAAATTTTCCATATT+TGG + chr5_4:7189736-7189755 Msa0834160:three_prime_UTR 20.0%
!! AATCATTAGGTTAAATAAAG+AGG - chr5_4:7189802-7189821 None:intergenic 20.0%
!!! TCTTTATTTAACCTAATGAT+TGG + chr5_4:7189801-7189820 Msa0834160:three_prime_UTR 20.0%
! TTTAAGAATCATAAAAGACG+AGG - chr5_4:7187273-7187292 None:intergenic 25.0%
! AATATATGCATTGTGCAATA+AGG - chr5_4:7187704-7187723 None:intergenic 25.0%
! TTATCCACACATCATATATA+TGG - chr5_4:7188028-7188047 None:intergenic 25.0%
!! ATCTTAGATATTTTCACTAC+TGG + chr5_4:7188059-7188078 Msa0834160:intron 25.0%
! TCAAATGATAAAATGATGCA+TGG - chr5_4:7188193-7188212 None:intergenic 25.0%
!!! TATCATTTGAGTTGTACTAA+TGG + chr5_4:7188203-7188222 Msa0834160:intron 25.0%
!!! ATCATTTGAGTTGTACTAAT+GGG + chr5_4:7188204-7188223 Msa0834160:intron 25.0%
! ATAGCATTCAATATTCTTCA+CGG + chr5_4:7188365-7188384 Msa0834160:CDS 25.0%
!! AGGTTAGTCATTGTAATTTA+TGG + chr5_4:7188461-7188480 Msa0834160:intron 25.0%
! ATTGTAATTTATGGTGTGTT+TGG + chr5_4:7188470-7188489 Msa0834160:intron 25.0%
! GAATTATGTTTAAACACAGT+CGG - chr5_4:7188570-7188589 None:intergenic 25.0%
! TATTAATCTAACCACATGAT+TGG + chr5_4:7188610-7188629 Msa0834160:intron 25.0%
! TATTACAATCTGTTTAGACA+TGG - chr5_4:7188729-7188748 None:intergenic 25.0%
! ATGTCTAAACAGATTGTAAT+AGG + chr5_4:7188728-7188747 Msa0834160:intron 25.0%
! TGTCTAAACAGATTGTAATA+GGG + chr5_4:7188729-7188748 Msa0834160:intron 25.0%
! GTTACTAATAAGTCCATATA+TGG + chr5_4:7188972-7188991 Msa0834160:intron 25.0%
! TCAGGTAATTTAACCATATA+TGG - chr5_4:7188988-7189007 None:intergenic 25.0%
! TTCATATGAACAATAAACTC+AGG - chr5_4:7189006-7189025 None:intergenic 25.0%
! TGAAAAATAGTTGAGTTCAA+TGG + chr5_4:7189022-7189041 Msa0834160:intron 25.0%
! AAACATAATGAATTCTACAC+CGG + chr5_4:7189124-7189143 Msa0834160:CDS 25.0%
! GTATATATTCAGGTATACAT+AGG - chr5_4:7189655-7189674 None:intergenic 25.0%
! TTTATATCCTATAATGGTCA+TGG - chr5_4:7189707-7189726 None:intergenic 25.0%
! CTAGCACTTATAAAGTTATA+TGG + chr5_4:7189769-7189788 Msa0834160:three_prime_UTR 25.0%
CAGAAGTTCCAAATTAATCA+AGG + chr5_4:7187325-7187344 Msa0834160:CDS 30.0%
AGATTGAGCCTTGATTAATT+TGG - chr5_4:7187336-7187355 None:intergenic 30.0%
!! ATCCTCTTCTTTGAAATTGA+AGG - chr5_4:7187803-7187822 None:intergenic 30.0%
ATTTCAAAGAAGAGGATGAA+AGG + chr5_4:7187806-7187825 Msa0834160:CDS 30.0%
GTTAGTGCAGTATTTGATAT+TGG + chr5_4:7187966-7187985 Msa0834160:intron 30.0%
! ATTTGATATTGGTGCTTGAT+AGG + chr5_4:7187977-7187996 Msa0834160:intron 30.0%
!!! TATATGGATGGACCTTTTTT+TGG - chr5_4:7188012-7188031 None:intergenic 30.0%
! TTTTCTTCTTCCTACCAAAT+AGG + chr5_4:7188097-7188116 Msa0834160:intron 30.0%
ATAAAATGATGCATGGACAT+CGG - chr5_4:7188186-7188205 None:intergenic 30.0%
GAAGAATATTGAATGCTATC+AGG - chr5_4:7188364-7188383 None:intergenic 30.0%
! AAGTTGGTTGACAAAACATT+TGG + chr5_4:7188536-7188555 Msa0834160:intron 30.0%
! TTTTGTGCAGTATGTTTTCA+GGG - chr5_4:7188642-7188661 None:intergenic 30.0%
TGAATTACATCTACGGAAAA+GGG + chr5_4:7188873-7188892 Msa0834160:CDS 30.0%
TTCATTATGTTTAGTAGCTC+TGG - chr5_4:7189116-7189135 None:intergenic 30.0%
GTCTACAAAGATGAAAATCA+AGG + chr5_4:7189544-7189563 Msa0834160:three_prime_UTR 30.0%
ATTGTTGTGATTTCAAGAGT+TGG + chr5_4:7189587-7189606 Msa0834160:three_prime_UTR 30.0%
TTGTTGTGATTTCAAGAGTT+GGG + chr5_4:7189588-7189607 Msa0834160:three_prime_UTR 30.0%
AGAAATACCATGACCATTAT+AGG + chr5_4:7189697-7189716 Msa0834160:three_prime_UTR 30.0%
TAGCTGTATGTATCCAAATA+TGG - chr5_4:7189752-7189771 None:intergenic 30.0%
!!! GTAGTGGATACGTTTTGTTT+TGG - chr5_4:7187124-7187143 None:intergenic 35.0%
ATCTGAATTGAACATGTCCA+TGG + chr5_4:7187238-7187257 Msa0834160:exon 35.0%
! CGATTACAACATGTTCCTTT+TGG - chr5_4:7187364-7187383 None:intergenic 35.0%
AAAGGAACATGTTGTAATCG+TGG + chr5_4:7187364-7187383 Msa0834160:CDS 35.0%
AAGGAACATGTTGTAATCGT+GGG + chr5_4:7187365-7187384 Msa0834160:CDS 35.0%
TGGAGTGTACTTGATTCAAT+TGG + chr5_4:7187593-7187612 Msa0834160:CDS 35.0%
GTTCATAATATCAGCTGTAC+AGG + chr5_4:7187740-7187759 Msa0834160:intron 35.0%
ATAATATCAGCTGTACAGGA+TGG + chr5_4:7187744-7187763 Msa0834160:intron 35.0%
TGCCTTCAATTTCAAAGAAG+AGG + chr5_4:7187798-7187817 Msa0834160:CDS 35.0%
!! ACATTTTCAGTCAGAAGTGT+TGG - chr5_4:7187881-7187900 None:intergenic 35.0%
ACTTCTGACTGAAAATGTGT+TGG + chr5_4:7187883-7187902 Msa0834160:intron 35.0%
! CTTGTGTTGGTATCAAACAT+TGG - chr5_4:7187922-7187941 None:intergenic 35.0%
CCACACATCATATATATGGA+TGG - chr5_4:7188024-7188043 None:intergenic 35.0%
CCATCCATATATATGATGTG+TGG + chr5_4:7188021-7188040 Msa0834160:intron 35.0%
TAAAATGATGCATGGACATC+GGG - chr5_4:7188185-7188204 None:intergenic 35.0%
TTGTACTAATGGGACGTTAT+TGG + chr5_4:7188214-7188233 Msa0834160:intron 35.0%
GAATATTGAATGCTATCAGG+AGG - chr5_4:7188361-7188380 None:intergenic 35.0%
CATTCAATATTCTTCACGGT+TGG + chr5_4:7188369-7188388 Msa0834160:CDS 35.0%
AAGATTGAACCAAGTCCAAA+TGG + chr5_4:7188394-7188413 Msa0834160:CDS 35.0%
AGATTGAACCAAGTCCAAAT+GGG + chr5_4:7188395-7188414 Msa0834160:CDS 35.0%
GGATACCTTATTGGAATTCT+TGG + chr5_4:7188417-7188436 Msa0834160:CDS 35.0%
ACCTTATTGGAATTCTTGGA+TGG + chr5_4:7188421-7188440 Msa0834160:CDS 35.0%
CCTTATTGGAATTCTTGGAT+GGG + chr5_4:7188422-7188441 Msa0834160:CDS 35.0%
! CTTTTGTGCAGTATGTTTTC+AGG - chr5_4:7188643-7188662 None:intergenic 35.0%
CTGAAAACATACTGCACAAA+AGG + chr5_4:7188641-7188660 Msa0834160:intron 35.0%
TAGGACTAAAGCTTCAGAAT+TGG - chr5_4:7188685-7188704 None:intergenic 35.0%
! TTTTCTGAGCCAAAGTTTGT+TGG + chr5_4:7188791-7188810 Msa0834160:CDS 35.0%
AAAAGGTTGTCCATCTGAAT+AGG - chr5_4:7188843-7188862 None:intergenic 35.0%
GTGAATTACATCTACGGAAA+AGG + chr5_4:7188872-7188891 Msa0834160:CDS 35.0%
ATAAACCAGTAGACTTTGGT+TGG - chr5_4:7188926-7188945 None:intergenic 35.0%
TGGACTTATTAGTAACAACC+TGG - chr5_4:7188968-7188987 None:intergenic 35.0%
AAATAGTTGAGTTCAATGGC+AGG + chr5_4:7189026-7189045 Msa0834160:intron 35.0%
!! ATTATGTTTAGTAGCTCTGG+AGG - chr5_4:7189113-7189132 None:intergenic 35.0%
!! GAAGACGCTTTTAGAGAATA+TGG + chr5_4:7189356-7189375 Msa0834160:CDS 35.0%
GAGAATATGGCAATGAAAGA+TGG + chr5_4:7189369-7189388 Msa0834160:CDS 35.0%
GCATATTTCCACTAACCATA+CGG + chr5_4:7189396-7189415 Msa0834160:CDS 35.0%
CATATTTCCACTAACCATAC+GGG + chr5_4:7189397-7189416 Msa0834160:CDS 35.0%
TTGTCATACCTAAGCTAGTA+AGG + chr5_4:7189481-7189500 Msa0834160:three_prime_UTR 35.0%
TGTTGTGATTTCAAGAGTTG+GGG + chr5_4:7189589-7189608 Msa0834160:three_prime_UTR 35.0%
TATTCAGGTATACATAGGGT+GGG - chr5_4:7189650-7189669 None:intergenic 35.0%
ATATTCAGGTATACATAGGG+TGG - chr5_4:7189651-7189670 None:intergenic 35.0%
! TCCACTACCACTAGTTTATG+TGG + chr5_4:7187136-7187155 Msa0834160:five_prime_UTR 40.0%
TGTGTTGTGTGTTCAGCTTT+GGG - chr5_4:7187162-7187181 None:intergenic 40.0%
TGATTGTAGCTACTAGCTAC+AGG - chr5_4:7187212-7187231 None:intergenic 40.0%
CCAATTCTGGTATGACAAGT+TGG - chr5_4:7187299-7187318 None:intergenic 40.0%
CCAACTTGTCATACCAGAAT+TGG + chr5_4:7187296-7187315 Msa0834160:CDS 40.0%
CTAGAGTTGAAACCTGTGAA+GGG - chr5_4:7187423-7187442 None:intergenic 40.0%
TTGTGTTGAATTCTCAGGCT+TGG + chr5_4:7187494-7187513 Msa0834160:intron 40.0%
!! TCACTCACCCTTTTCAAGAA+TGG + chr5_4:7187569-7187588 Msa0834160:CDS 40.0%
!! CACTCACCCTTTTCAAGAAT+GGG + chr5_4:7187570-7187589 Msa0834160:CDS 40.0%
ACTCCACCCATTCTTGAAAA+GGG - chr5_4:7187579-7187598 None:intergenic 40.0%
TATATTAGCTGAGCTTGAGC+TGG + chr5_4:7187718-7187737 Msa0834160:intron 40.0%
TCAGTGTCATGTACTTGTGT+TGG - chr5_4:7187935-7187954 None:intergenic 40.0%
AGGTCCATCCTACCAAAAAA+AGG + chr5_4:7187997-7188016 Msa0834160:intron 40.0%
!!! TGGACCTTTTTTTGGTAGGA+TGG - chr5_4:7188004-7188023 None:intergenic 40.0%
!!! TGGATGGACCTTTTTTTGGT+AGG - chr5_4:7188008-7188027 None:intergenic 40.0%
AAAATGATGCATGGACATCG+GGG - chr5_4:7188184-7188203 None:intergenic 40.0%
!!! GAGGGTACTTTTGGAAACTT+TGG + chr5_4:7188324-7188343 Msa0834160:CDS 40.0%
GATTGAACCAAGTCCAAATG+GGG + chr5_4:7188396-7188415 Msa0834160:CDS 40.0%
TCCAAATGGGGATACCTTAT+TGG + chr5_4:7188408-7188427 Msa0834160:CDS 40.0%
! TCCAATAAGGTATCCCCATT+TGG - chr5_4:7188412-7188431 None:intergenic 40.0%
CCCATCCAAGAATTCCAATA+AGG - chr5_4:7188425-7188444 None:intergenic 40.0%
TGGGTCTAAACTAGTTGCAA+AGG + chr5_4:7188441-7188460 Msa0834160:CDS 40.0%
AATCCCATCCACTTAGCTAT+CGG - chr5_4:7188773-7188792 None:intergenic 40.0%
GCACAATGACCAACAAACTT+TGG - chr5_4:7188803-7188822 None:intergenic 40.0%
!!! ATGGACAACCTTTTGAAGCA+CGG + chr5_4:7188849-7188868 Msa0834160:CDS 40.0%
TAATTCACCCGTGCTTCAAA+AGG - chr5_4:7188860-7188879 None:intergenic 40.0%
TAGACTTTGGTTGGAGAAAC+AGG - chr5_4:7188917-7188936 None:intergenic 40.0%
TTTCTCCAACCAAAGTCTAC+TGG + chr5_4:7188918-7188937 Msa0834160:CDS 40.0%
GCAGATAAACCAGTAGACTT+TGG - chr5_4:7188930-7188949 None:intergenic 40.0%
TCCTAAAATAACCGAGCCAT+CGG + chr5_4:7189049-7189068 Msa0834160:CDS 40.0%
CTAAGGATCTAGTGGAAAAC+TGG + chr5_4:7189087-7189106 Msa0834160:CDS 40.0%
GTCCTGATTATAGTGTCATC+CGG - chr5_4:7189146-7189165 None:intergenic 40.0%
TATAATCAGGACTCCGTTGA+TGG + chr5_4:7189154-7189173 Msa0834160:CDS 40.0%
! GAAACAGGTGGACTTATTGA+TGG - chr5_4:7189194-7189213 None:intergenic 40.0%
ACCCAATGACTCCAAATCTT+GGG + chr5_4:7189249-7189268 Msa0834160:CDS 40.0%
ATGGTTAGTGGAAATATGCG+CGG - chr5_4:7189395-7189414 None:intergenic 40.0%
ATACCTAAGCTAGTAAGGCT+TGG + chr5_4:7189486-7189505 Msa0834160:three_prime_UTR 40.0%
AAATTAGTGTGCTCCAGCAA+TGG - chr5_4:7189513-7189532 None:intergenic 40.0%
AAGGCTGACAACACAATGAA+AGG + chr5_4:7189563-7189582 Msa0834160:three_prime_UTR 40.0%
ATTCAGGTATACATAGGGTG+GGG - chr5_4:7189649-7189668 None:intergenic 40.0%
GCCACATAAACTAGTGGTAG+TGG - chr5_4:7187140-7187159 None:intergenic 45.0%
CTTTGGGCCACATAAACTAG+TGG - chr5_4:7187146-7187165 None:intergenic 45.0%
GTGTGTTGTGTGTTCAGCTT+TGG - chr5_4:7187163-7187182 None:intergenic 45.0%
CTACAGGTATTACCGTTGAG+TGG - chr5_4:7187196-7187215 None:intergenic 45.0%
! ACTTCTGAGAGCTCCAATTC+TGG - chr5_4:7187312-7187331 None:intergenic 45.0%
GGCTCAATCTTCAGTCCAAA+AGG + chr5_4:7187346-7187365 Msa0834160:CDS 45.0%
GAACATGTTGTAATCGTGGG+TGG + chr5_4:7187368-7187387 Msa0834160:CDS 45.0%
GCTAGAGTTGAAACCTGTGA+AGG - chr5_4:7187424-7187443 None:intergenic 45.0%
CCTGAGAATTCAACACAAGC+AGG - chr5_4:7187492-7187511 None:intergenic 45.0%
CCTGCTTGTGTTGAATTCTC+AGG + chr5_4:7187489-7187508 Msa0834160:intron 45.0%
!! GAATTCTCAGGCTTGGTGTT+CGG + chr5_4:7187501-7187520 Msa0834160:intron 45.0%
!! TCACCCTTTTCAAGAATGGG+TGG + chr5_4:7187573-7187592 Msa0834160:CDS 45.0%
CACTCCACCCATTCTTGAAA+AGG - chr5_4:7187580-7187599 None:intergenic 45.0%
ATATCAGCTGTACAGGATGG+TGG + chr5_4:7187747-7187766 Msa0834160:intron 45.0%
!! AGTTTTGCCACTGGCCTATT+TGG - chr5_4:7188114-7188133 None:intergenic 45.0%
! AAGGTATCCCCATTTGGACT+TGG - chr5_4:7188406-7188425 None:intergenic 45.0%
CAGGGTCATAACCAATCATG+TGG - chr5_4:7188624-7188643 None:intergenic 45.0%
CAGATTGTAATAGGGTGCGA+TGG + chr5_4:7188737-7188756 Msa0834160:intron 45.0%
TTCGATCACCGATAGCTAAG+TGG + chr5_4:7188762-7188781 Msa0834160:CDS 45.0%
ATCACCGATAGCTAAGTGGA+TGG + chr5_4:7188766-7188785 Msa0834160:CDS 45.0%
TCACCGATAGCTAAGTGGAT+GGG + chr5_4:7188767-7188786 Msa0834160:CDS 45.0%
AGGTTGTCCATCTGAATAGG+AGG - chr5_4:7188840-7188859 None:intergenic 45.0%
!!! TGGACAACCTTTTGAAGCAC+GGG + chr5_4:7188850-7188869 Msa0834160:CDS 45.0%
GCACGGGTGAATTACATCTA+CGG + chr5_4:7188866-7188885 Msa0834160:CDS 45.0%
TGCTTCAACAGTTCATCTCC+AGG + chr5_4:7188947-7188966 Msa0834160:CDS 45.0%
!!! ACCGATGGCTCGGTTATTTT+AGG - chr5_4:7189053-7189072 None:intergenic 45.0%
GGTGCTAAAGAAGCAAGCTA+AGG + chr5_4:7189070-7189089 Msa0834160:CDS 45.0%
GAAGCAAGCTAAGGATCTAG+TGG + chr5_4:7189079-7189098 Msa0834160:CDS 45.0%
CACCGGATGACACTATAATC+AGG + chr5_4:7189141-7189160 Msa0834160:CDS 45.0%
CAAAGCCATCGATCCATCAA+CGG - chr5_4:7189170-7189189 None:intergenic 45.0%
!! ATAAGTCCACCTGTTTCTGC+AGG + chr5_4:7189197-7189216 Msa0834160:CDS 45.0%
ACAACTCTACCTGCAGAAAC+AGG - chr5_4:7189209-7189228 None:intergenic 45.0%
CACCCAATGACTCCAAATCT+TGG + chr5_4:7189248-7189267 Msa0834160:CDS 45.0%
! GCCCAAGATTTGGAGTCATT+GGG - chr5_4:7189253-7189272 None:intergenic 45.0%
! TGCCCAAGATTTGGAGTCAT+TGG - chr5_4:7189254-7189273 None:intergenic 45.0%
ATGACTCCAAATCTTGGGCA+AGG + chr5_4:7189254-7189273 Msa0834160:CDS 45.0%
ATGTTTGCCCGTATGGTTAG+TGG - chr5_4:7189407-7189426 None:intergenic 45.0%
AACCATACGGGCAAACATTG+TGG + chr5_4:7189409-7189428 Msa0834160:CDS 45.0%
ACCATACGGGCAAACATTGT+GGG + chr5_4:7189410-7189429 Msa0834160:CDS 45.0%
TTCCTAACAGAACACACCAG+CGG - chr5_4:7189456-7189475 None:intergenic 45.0%
ACAATCTCGCCACCACTCAA+CGG + chr5_4:7187181-7187200 Msa0834160:five_prime_UTR 50.0%
CAGGTATTACCGTTGAGTGG+TGG - chr5_4:7187193-7187212 None:intergenic 50.0%
AGACGAGGTTGTTGTAGCCA+TGG - chr5_4:7187258-7187277 None:intergenic 50.0%
CATGTTGTAATCGTGGGTGG+TGG + chr5_4:7187371-7187390 Msa0834160:CDS 50.0%
GAAGGGATAGAGCAGTTGCA+AGG - chr5_4:7187406-7187425 None:intergenic 50.0%
CAACTGCTCTATCCCTTCAC+AGG + chr5_4:7187408-7187427 Msa0834160:CDS 50.0%
CAGTCAGAGTCACTTCGAAC+AGG + chr5_4:7187539-7187558 Msa0834160:CDS 50.0%
TCAGAGTCACTTCGAACAGG+TGG + chr5_4:7187542-7187561 Msa0834160:CDS 50.0%
! ATGGTGGTGAAGTCTGAGGA+TGG + chr5_4:7187763-7187782 Msa0834160:CDS 50.0%
CTTCCTACCAAATAGGCCAG+TGG + chr5_4:7188104-7188123 Msa0834160:intron 50.0%
! TTGCCACTGGCCTATTTGGT+AGG - chr5_4:7188110-7188129 None:intergenic 50.0%
ACGGATATTGTGCAGCCAAG+AGG + chr5_4:7188285-7188304 Msa0834160:intron 50.0%
!!! AGTGGAGAGGAGGGTACTTT+TGG + chr5_4:7188315-7188334 Msa0834160:CDS 50.0%
GTTGGTCATTGTGCTTTCCG+TGG + chr5_4:7188809-7188828 Msa0834160:CDS 50.0%
CTGAATAGGAGGCAAGTCCA+CGG - chr5_4:7188829-7188848 None:intergenic 50.0%
GGACTTGCCTCCTATTCAGA+TGG + chr5_4:7188830-7188849 Msa0834160:CDS 50.0%
!! CTTCTTTAGCACCGATGGCT+CGG - chr5_4:7189063-7189082 None:intergenic 50.0%
! GCTTGCTTCTTTAGCACCGA+TGG - chr5_4:7189068-7189087 None:intergenic 50.0%
! CGTTGATGGATCGATGGCTT+TGG + chr5_4:7189168-7189187 Msa0834160:CDS 50.0%
ACTCTACCTGCAGAAACAGG+TGG - chr5_4:7189206-7189225 None:intergenic 50.0%
GCAGGTAGAGTTGTACTCGT+TGG + chr5_4:7189215-7189234 Msa0834160:CDS 50.0%
! ATTTGGAGTCATTGGGTGCC+AGG - chr5_4:7189246-7189265 None:intergenic 50.0%
CATGCTCCTTGCCCAAGATT+TGG - chr5_4:7189263-7189282 None:intergenic 50.0%
! AGGAGCATGTTGTGCTCTTG+AGG + chr5_4:7189274-7189293 Msa0834160:CDS 50.0%
TTGTGCTCTTGAGGATGCAG+TGG + chr5_4:7189283-7189302 Msa0834160:CDS 50.0%
ACCCACAATGTTTGCCCGTA+TGG - chr5_4:7189414-7189433 None:intergenic 50.0%
ACGGGCAAACATTGTGGGTT+CGG + chr5_4:7189415-7189434 Msa0834160:CDS 50.0%
TTGTGGGTTCGGCTTTGCAA+TGG + chr5_4:7189426-7189445 Msa0834160:CDS 50.0%
TGTGGGTTCGGCTTTGCAAT+GGG + chr5_4:7189427-7189446 Msa0834160:CDS 50.0%
TCCTAACAGAACACACCAGC+GGG - chr5_4:7189455-7189474 None:intergenic 50.0%
! GGACCAAGCCTTACTAGCTT+AGG - chr5_4:7189492-7189511 None:intergenic 50.0%
! AGTAAGGCTTGGTCCATTGC+TGG + chr5_4:7189497-7189516 Msa0834160:three_prime_UTR 50.0%
TGGTGTTCGGTCTCTTGTGC+TGG + chr5_4:7187514-7187533 Msa0834160:CDS 55.0%
! CAGGATGGTGGTGAAGTCTG+AGG + chr5_4:7187759-7187778 Msa0834160:intron 55.0%
! ATGGGTGCGAGTTTTGCCAC+TGG - chr5_4:7188123-7188142 None:intergenic 55.0%
ATGCATGGACATCGGGGAGT+GGG - chr5_4:7188178-7188197 None:intergenic 55.0%
TACGGAAAAGGGTTACGCGC+AGG + chr5_4:7188884-7188903 Msa0834160:CDS 55.0%
! GGACTCCGTTGATGGATCGA+TGG + chr5_4:7189162-7189181 Msa0834160:CDS 55.0%
TTGTACTCGTTGGAGACGCC+TGG + chr5_4:7189225-7189244 Msa0834160:CDS 55.0%
ACCCGCTGGTGTGTTCTGTT+AGG + chr5_4:7189451-7189470 Msa0834160:CDS 55.0%
! ATCGTGGGTGGTGGCATTGC+AGG + chr5_4:7187380-7187399 Msa0834160:CDS 60.0%
GATGCATGGACATCGGGGAG+TGG - chr5_4:7188179-7188198 None:intergenic 60.0%
TCTCCACTGCACGCACCTCT+TGG - chr5_4:7188303-7188322 None:intergenic 60.0%
! AAGAGGTGCGTGCAGTGGAG+AGG + chr5_4:7188302-7188321 Msa0834160:CDS 60.0%
GCTTTGCAATGGGAACCCGC+TGG + chr5_4:7189437-7189456 Msa0834160:CDS 60.0%
! CAGCCAAGAGGTGCGTGCAG+TGG + chr5_4:7188297-7188316 Msa0834160:intron 65.0%
AGGTGCGTGCAGTGGAGAGG+AGG + chr5_4:7188305-7188324 Msa0834160:CDS 65.0%
GGTGCGTGCAGTGGAGAGGA+GGG + chr5_4:7188306-7188325 Msa0834160:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 7187098 7189832 7187098 ID=Msa0834160;Name=Msa0834160
chr5_4 mRNA 7187098 7189832 7187098 ID=Msa0834160-mRNA-1;Parent=Msa0834160;Name=Msa0834160-mRNA-1;_AED=0.28;_eAED=0.28;_QI=153|1|1|1|1|1|6|360|402
chr5_4 exon 7187098 7187429 7187098 ID=Msa0834160-mRNA-1:exon:3208;Parent=Msa0834160-mRNA-1
chr5_4 exon 7187511 7187657 7187511 ID=Msa0834160-mRNA-1:exon:3209;Parent=Msa0834160-mRNA-1
chr5_4 exon 7187762 7187827 7187762 ID=Msa0834160-mRNA-1:exon:3210;Parent=Msa0834160-mRNA-1
chr5_4 exon 7188300 7188462 7188300 ID=Msa0834160-mRNA-1:exon:3211;Parent=Msa0834160-mRNA-1
chr5_4 exon 7188740 7188968 7188740 ID=Msa0834160-mRNA-1:exon:3212;Parent=Msa0834160-mRNA-1
chr5_4 exon 7189048 7189832 7189048 ID=Msa0834160-mRNA-1:exon:3213;Parent=Msa0834160-mRNA-1
chr5_4 five_prime_UTR 7187098 7187250 7187098 ID=Msa0834160-mRNA-1:five_prime_utr;Parent=Msa0834160-mRNA-1
chr5_4 CDS 7187251 7187429 7187251 ID=Msa0834160-mRNA-1:cds;Parent=Msa0834160-mRNA-1
chr5_4 CDS 7187511 7187657 7187511 ID=Msa0834160-mRNA-1:cds;Parent=Msa0834160-mRNA-1
chr5_4 CDS 7187762 7187827 7187762 ID=Msa0834160-mRNA-1:cds;Parent=Msa0834160-mRNA-1
chr5_4 CDS 7188300 7188462 7188300 ID=Msa0834160-mRNA-1:cds;Parent=Msa0834160-mRNA-1
chr5_4 CDS 7188740 7188968 7188740 ID=Msa0834160-mRNA-1:cds;Parent=Msa0834160-mRNA-1
chr5_4 CDS 7189048 7189472 7189048 ID=Msa0834160-mRNA-1:cds;Parent=Msa0834160-mRNA-1
chr5_4 three_prime_UTR 7189473 7189832 7189473 ID=Msa0834160-mRNA-1:three_prime_utr;Parent=Msa0834160-mRNA-1
Gene Sequence

>Msa0834160

ATGTCCATGGCTACAACAACCTCGTCTTTTATGATTCTTAAATCTCCAACTTGTCATACCAGAATTGGAGCTCTCAGAAGTTCCAAATTAATCAAGGCTCAATCTTCAGTCCAAAAGGAACATGTTGTAATCGTGGGTGGTGGCATTGCAGGCCTTGCAACTGCTCTATCCCTTCACAGGCTTGGTGTTCGGTCTCTTGTGCTGGAGCAGTCAGAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAGAATGGGTGGAGTGTACTTGATTCAATTGGAGTAGCTAATTATCTTAGAACTCAATATTTAGAAATTCAAGGGATGGTGGTGAAGTCTGAGGATGGAAGAGAACTACGTGCCTTCAATTTCAAAGAAGAGGATGAAAGCCAAGAGGTGCGTGCAGTGGAGAGGAGGGTACTTTTGGAAACTTTGGCTGCTCAGTTGCCTCCTGATAGCATTCAATATTCTTCACGGTTGGTCAAGATTGAACCAAGTCCAAATGGGGATACCTTATTGGAATTCTTGGATGGGTCTAAACTAGTTGCAAAGATTGTAATAGGGTGCGATGGAATTCGATCACCGATAGCTAAGTGGATGGGATTTTCTGAGCCAAAGTTTGTTGGTCATTGTGCTTTCCGTGGACTTGCCTCCTATTCAGATGGACAACCTTTTGAAGCACGGGTGAATTACATCTACGGAAAAGGGTTACGCGCAGGATACGTTCCTGTTTCTCCAACCAAAGTCTACTGGTTTATCTGCTTCAACAGTTCATCTCCAGGTCCTAAAATAACCGAGCCATCGGTGCTAAAGAAGCAAGCTAAGGATCTAGTGGAAAACTGGCCTCCAGAGCTACTAAACATAATGAATTCTACACCGGATGACACTATAATCAGGACTCCGTTGATGGATCGATGGCTTTGGCCATCAATAAGTCCACCTGTTTCTGCAGGTAGAGTTGTACTCGTTGGAGACGCCTGGCACCCAATGACTCCAAATCTTGGGCAAGGAGCATGTTGTGCTCTTGAGGATGCAGTGGTTCTTGCTAAAAAGCTTGCTGCAGCAATCGATTCTGATGATGCTTCTATCGAAGACGCTTTTAGAGAATATGGCAATGAAAGATGGCCGCGCATATTTCCACTAACCATACGGGCAAACATTGTGGGTTCGGCTTTGCAATGGGAACCCGCTGGTGTGTTCTGTTAG

Protein sequence

>Msa0834160

MSMATTTSSFMILKSPTCHTRIGALRSSKLIKAQSSVQKEHVVIVGGGIAGLATALSLHRLGVRSLVLEQSESLRTGGTSLTLFKNGWSVLDSIGVANYLRTQYLEIQGMVVKSEDGRELRAFNFKEEDESQEVRAVERRVLLETLAAQLPPDSIQYSSRLVKIEPSPNGDTLLEFLDGSKLVAKIVIGCDGIRSPIAKWMGFSEPKFVGHCAFRGLASYSDGQPFEARVNYIYGKGLRAGYVPVSPTKVYWFICFNSSSPGPKITEPSVLKKQAKDLVENWPPELLNIMNSTPDDTIIRTPLMDRWLWPSISPPVSAGRVVLVGDAWHPMTPNLGQGACCALEDAVVLAKKLAAAIDSDDASIEDAFREYGNERWPRIFPLTIRANIVGSALQWEPAGVFC*