AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0833910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0833910 MtrunA17_Chr5g0399661 97.216 431 12 0 1 431 1 431 0.0 866
Msa0833910 MtrunA17_Chr5g0399671 86.925 413 47 4 3 408 1 413 0.0 719
Msa0833910 MtrunA17_Chr1g0211181 40.648 401 226 6 38 430 8 404 9.01e-95 290
Msa0833910 MtrunA17_Chr1g0211141 39.500 400 231 5 39 430 2 398 1.73e-82 259
Msa0833910 MtrunA17_Chr1g0197161 38.424 406 235 6 37 430 4 406 7.05e-80 252
Msa0833910 MtrunA17_Chr1g0211171 38.614 404 230 6 42 430 9 409 1.10e-78 249
Msa0833910 MtrunA17_Chr1g0211151 35.627 407 247 7 36 430 3 406 4.78e-66 216
Msa0833910 MtrunA17_Chr8g0375081 27.100 369 234 14 34 379 75 431 2.17e-23 102
Msa0833910 MtrunA17_Chr4g0018001 27.143 210 143 3 201 400 2 211 1.90e-22 95.9
Msa0833910 MtrunA17_Chr4g0010391 30.081 246 157 9 139 379 166 401 4.13e-22 98.2
Msa0833910 MtrunA17_Chr4g0017991 36.842 152 75 2 38 188 5 136 6.25e-22 92.8
Msa0833910 MtrunA17_Chr5g0402211 27.500 360 228 15 42 379 78 426 2.84e-21 96.7
Msa0833910 MtrunA17_Chr4g0017951 52.632 76 35 1 34 109 2 76 1.95e-19 82.4
Msa0833910 MtrunA17_Chr1g0148881 23.797 395 246 12 38 394 6 383 6.69e-12 67.0
Msa0833910 MtrunA17_Chr4g0017981 30.328 122 79 1 279 394 4 125 7.39e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0833910 AT2G35660.1 73.724 392 103 0 38 429 43 434 0.0 623
Msa0833910 AT2G29720.1 66.667 357 119 0 52 408 55 411 0.0 521
Msa0833910 AT2G35660.2 72.812 320 87 0 110 429 1 320 0.0 509
Msa0833910 AT2G35660.3 72.812 320 87 0 110 429 1 320 0.0 509
Msa0833910 AT5G05320.1 35.150 367 223 3 40 394 7 370 1.16e-76 244
Msa0833910 AT4G38540.1 33.915 401 248 4 42 429 9 405 1.67e-71 231
Msa0833910 AT4G15760.1 32.782 363 214 11 50 394 39 389 4.03e-49 172
Msa0833910 AT4G15760.2 31.806 371 219 10 50 394 39 401 2.95e-48 171
Msa0833910 AT4G15765.1 26.578 301 171 5 42 335 6 263 7.20e-24 100
Msa0833910 AT5G67030.2 27.729 339 211 14 38 356 79 403 9.88e-23 101
Msa0833910 AT5G67030.1 27.434 339 212 14 38 356 79 403 1.08e-22 101
Msa0833910 AT5G11330.1 23.018 391 253 10 38 394 4 380 6.78e-12 67.4

Find 156 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATACCTTATTGGAATTCT+TGG 0.212200 5_4:-7010352 Msa0833910:CDS
AGATTGAGCCTTGATTAATT+TGG 0.234422 5_4:+7011432 None:intergenic
ATGTCTAAACAGATTGTAAT+AGG 0.240740 5_4:-7010041 Msa0833910:intron
CGATTACAACATGTTCCTTT+TGG 0.248040 5_4:+7011404 None:intergenic
AGAAATACCATGACCATTAT+AGG 0.249032 5_4:-7009070 Msa0833910:three_prime_UTR
TCCAAATGGGGATACCTTAT+TGG 0.254372 5_4:-7010361 Msa0833910:CDS
TGCCCAAGATTTGGAGTCAT+TGG 0.307226 5_4:+7009518 None:intergenic
CATGCTCCTTGCCCAAGATT+TGG 0.307845 5_4:+7009509 None:intergenic
TTCATTATGTTTAGTAGCTC+TGG 0.317013 5_4:+7009656 None:intergenic
TGAATATTGTGTATATATTC+AGG 0.322784 5_4:+7009105 None:intergenic
ATCCTCTTCTTTGAAATTGA+AGG 0.328744 5_4:+7010969 None:intergenic
TAGACTTTGGTTGGAGAAAC+AGG 0.332821 5_4:+7009855 None:intergenic
CACCCAATGACTCCAAATCT+TGG 0.340691 5_4:-7009521 Msa0833910:CDS
AGTGGAGAGGAGGGTACTTT+TGG 0.353165 5_4:-7010454 Msa0833910:CDS
GTGTGTTGTGTGTTCAGCTT+TGG 0.355220 5_4:+7011605 None:intergenic
CCAACTTGTCATACCAGAAT+TGG 0.356587 5_4:-7011469 Msa0833910:CDS
TCCAATAAGGTATCCCCATT+TGG 0.359215 5_4:+7010360 None:intergenic
ATCGTGGGTGGTGGCATTGC+AGG 0.363319 5_4:-7011385 Msa0833910:CDS
TCTCCACTGCACGCACCTCT+TGG 0.364886 5_4:+7010469 None:intergenic
CTAGCACTTATAAAGTTATA+TGG 0.373084 5_4:-7008998 Msa0833910:three_prime_UTR
GCCCAAGATTTGGAGTCATT+GGG 0.380043 5_4:+7009519 None:intergenic
TTGTTGTGATTTCAAGAGTT+GGG 0.381370 5_4:-7009179 Msa0833910:three_prime_UTR
CCCATCCAAGAATTCCAATA+AGG 0.383303 5_4:+7010347 None:intergenic
CTAAGGATCTAGTGGAAAAC+TGG 0.384760 5_4:-7009682 Msa0833910:CDS
GTGAATTACATCTACGGAAA+AGG 0.386225 5_4:-7009897 Msa0833910:CDS
TGTGTTGTGTGTTCAGCTTT+GGG 0.390962 5_4:+7011606 None:intergenic
ACTTCTGAGAGCTCCAATTC+TGG 0.395076 5_4:+7011456 None:intergenic
ATTAAGTTTATATCCTATAA+TGG 0.396976 5_4:+7009057 None:intergenic
TCTTTATTTAACCTAATGAT+TGG 0.399120 5_4:-7008966 Msa0833910:three_prime_UTR
AGTAAGGCTTGGTCCATTGC+TGG 0.401844 5_4:-7009270 Msa0833910:CDS
TGGTGTTCGGTCTCTTGTGC+TGG 0.403207 5_4:-7011251 Msa0833910:CDS
TAGCTGTATGTATCCAAATA+TGG 0.404062 5_4:+7009018 None:intergenic
TATAATCAGGACTCCGTTGA+TGG 0.407537 5_4:-7009615 Msa0833910:CDS
GAATTCTCAGGCTTGGTGTT+CGG 0.408757 5_4:-7011264 Msa0833910:intron
GAAGAATATTGAATGCTATC+AGG 0.408814 5_4:+7010408 None:intergenic
ATAGCATTCAATATTCTTCA+CGG 0.412492 5_4:-7010404 Msa0833910:CDS
CACTCCACCCATTCTTGAAA+AGG 0.414267 5_4:+7011188 None:intergenic
CATAGCACAAGCCAATCATT+AGG 0.414589 5_4:+7008955 None:intergenic
ATGTTTGCCCGTATGGTTAG+TGG 0.417439 5_4:+7009365 None:intergenic
CGTTGATGGATCGATGGCTT+TGG 0.417946 5_4:-7009601 Msa0833910:CDS
AAAAGGTTGTCCATCTGAAT+AGG 0.421657 5_4:+7009929 None:intergenic
ACGGGCAAACATTGTGGGTT+CGG 0.430334 5_4:-7009354 Msa0833910:CDS
ACCCACAATGTTTGCCCGTA+TGG 0.441085 5_4:+7009358 None:intergenic
TGTGGGTTCGGCTTTGCAAT+GGG 0.445153 5_4:-7009342 Msa0833910:CDS
TTGTCATACCTAAGCTAGTA+AGG 0.446445 5_4:-7009286 Msa0833910:CDS
ATTTGGAGTCATTGGGTGCC+AGG 0.447196 5_4:+7009526 None:intergenic
AAGATTGAACCAAGTCCAAA+TGG 0.447760 5_4:-7010375 Msa0833910:CDS
ACTCAATATTTAGAAATTCA+AGG 0.453429 5_4:-7011130 Msa0833910:CDS
AAGGTATCCCCATTTGGACT+TGG 0.464282 5_4:+7010366 None:intergenic
ACAACTCTACCTGCAGAAAC+AGG 0.465698 5_4:+7009563 None:intergenic
TAATTCACCCGTGCTTCAAA+AGG 0.468928 5_4:+7009912 None:intergenic
ACCTTATTGGAATTCTTGGA+TGG 0.470171 5_4:-7010348 Msa0833910:CDS
TTTCTCCAACCAAAGTCTAC+TGG 0.470585 5_4:-7009851 Msa0833910:CDS
CAACTGCTCTATCCCTTCAC+AGG 0.470796 5_4:-7011357 Msa0833910:intron
TGTCTAAACAGATTGTAATA+GGG 0.475468 5_4:-7010040 Msa0833910:intron
TGCCTTCAATTTCAAAGAAG+AGG 0.476217 5_4:-7010971 Msa0833910:CDS
TGCTTCAACAGTTCATCTCC+AGG 0.477142 5_4:-7009822 Msa0833910:intron
GGCTCAATCTTCAGTCCAAA+AGG 0.477210 5_4:-7011419 Msa0833910:CDS
GGACCAAGCCTTACTAGCTT+AGG 0.477240 5_4:+7009278 None:intergenic
CACCGGATGACACTATAATC+AGG 0.478910 5_4:-7009628 Msa0833910:CDS
TGAATTACATCTACGGAAAA+GGG 0.482581 5_4:-7009896 Msa0833910:CDS
ACCCAATGACTCCAAATCTT+GGG 0.482693 5_4:-7009520 Msa0833910:CDS
TGGAGTGTACTTGATTCAAT+TGG 0.482722 5_4:-7011172 Msa0833910:CDS
ACCATACGGGCAAACATTGT+GGG 0.483763 5_4:-7009359 Msa0833910:CDS
AGGTGCGTGCAGTGGAGAGG+AGG 0.485424 5_4:-7010464 Msa0833910:CDS
GCTTGCTTCTTTAGCACCGA+TGG 0.486635 5_4:+7009704 None:intergenic
CTTCTTTAGCACCGATGGCT+CGG 0.487707 5_4:+7009709 None:intergenic
ACCCGCTGGTGTGTTCTGTT+AGG 0.488168 5_4:-7009316 Msa0833910:CDS
AATCATTAGGTTAAATAAAG+AGG 0.488615 5_4:+7008968 None:intergenic
AGATTGAACCAAGTCCAAAT+GGG 0.490772 5_4:-7010374 Msa0833910:CDS
GCACAATGACCAACAAACTT+TGG 0.492071 5_4:+7009969 None:intergenic
CAGAAGTTCCAAATTAATCA+AGG 0.492791 5_4:-7011440 Msa0833910:CDS
ATTGTTGTGATTTCAAGAGT+TGG 0.493147 5_4:-7009180 Msa0833910:three_prime_UTR
GAGAATATGGCAATGAAAGA+TGG 0.497368 5_4:-7009400 Msa0833910:CDS
CATTCAATATTCTTCACGGT+TGG 0.499725 5_4:-7010400 Msa0833910:CDS
TTGTGGGTTCGGCTTTGCAA+TGG 0.501115 5_4:-7009343 Msa0833910:CDS
GAAACAGGTGGACTTATTGA+TGG 0.501429 5_4:+7009578 None:intergenic
TGATTGTAGCTACTAGCTAC+AGG 0.502883 5_4:+7011556 None:intergenic
GCAGATAAACCAGTAGACTT+TGG 0.503117 5_4:+7009842 None:intergenic
CAGTCAGAGTCACTTCGAAC+AGG 0.503637 5_4:-7011226 Msa0833910:CDS
CTCAATATTTAGAAATTCAA+GGG 0.504248 5_4:-7011129 Msa0833910:intron
ATAAACCAGTAGACTTTGGT+TGG 0.504282 5_4:+7009846 None:intergenic
CCAATTCTGGTATGACAAGT+TGG 0.517736 5_4:+7011469 None:intergenic
AACCATACGGGCAAACATTG+TGG 0.523320 5_4:-7009360 Msa0833910:CDS
TTTGCAATGGGACAACCCGC+TGG 0.523400 5_4:-7009330 Msa0833910:CDS
GCCACATAAACTAGTGGTAG+TGG 0.528026 5_4:+7011628 None:intergenic
ATAAGTCCACCTGTTTCTGC+AGG 0.528684 5_4:-7009572 Msa0833910:CDS
GCATATTTCCACTAACCATA+CGG 0.529804 5_4:-7009373 Msa0833910:CDS
GTCCTGATTATAGTGTCATC+CGG 0.533366 5_4:+7009626 None:intergenic
TCCACTACCACTAGTTTATG+TGG 0.536288 5_4:-7011629 Msa0833910:five_prime_UTR
TCCTAACAGAACACACCAGC+GGG 0.539378 5_4:+7009315 None:intergenic
CCTTATTGGAATTCTTGGAT+GGG 0.539919 5_4:-7010347 Msa0833910:CDS
AGGAGCATGTTGTGCTCTTG+AGG 0.544378 5_4:-7009495 Msa0833910:CDS
GTATATATTCAGGTATACAT+AGG 0.544796 5_4:+7009115 None:intergenic
GCAGGTAGAGTTGTACTCGT+TGG 0.545159 5_4:-7009554 Msa0833910:CDS
GAAGCAAGCTAAGGATCTAG+TGG 0.546205 5_4:-7009690 Msa0833910:CDS
TTGTACTCGTTGGAGACGCC+TGG 0.546377 5_4:-7009544 Msa0833910:CDS
TCCTAAAATAACCGAGCCAT+CGG 0.546688 5_4:-7009720 Msa0833910:CDS
AAGAGGTGCGTGCAGTGGAG+AGG 0.550530 5_4:-7010467 Msa0833910:CDS
ACTCCACCCATTCTTGAAAA+GGG 0.552204 5_4:+7011189 None:intergenic
TGTTGTGATTTCAAGAGTTG+GGG 0.553078 5_4:-7009178 Msa0833910:three_prime_UTR
CAGATTGTAATAGGGTGCGA+TGG 0.556706 5_4:-7010032 Msa0833910:CDS
CAGCCAAGAGGTGCGTGCAG+TGG 0.558479 5_4:-7010472 Msa0833910:CDS
TATTCAGGTATACATAGGGT+GGG 0.560382 5_4:+7009120 None:intergenic
TTTATATCCTATAATGGTCA+TGG 0.560462 5_4:+7009063 None:intergenic
GTCTACAAAGATGAAAATCA+AGG 0.561028 5_4:-7009223 Msa0833910:exon
AAATTAGTGTGCTCCAGCAA+TGG 0.570234 5_4:+7009257 None:intergenic
AGACGAGGTTGTTGTAGCCA+TGG 0.572720 5_4:+7011510 None:intergenic
AAGGAACATGTTGTAATCGT+GGG 0.573031 5_4:-7011400 Msa0833910:CDS
AAAGGAACATGTTGTAATCG+TGG 0.573135 5_4:-7011401 Msa0833910:CDS
TATATATTCAGGTATACATA+GGG 0.573689 5_4:+7009116 None:intergenic
GGACTTGCCTCCTATTCAGA+TGG 0.575892 5_4:-7009939 Msa0833910:CDS
GCACGGGTGAATTACATCTA+CGG 0.577218 5_4:-7009903 Msa0833910:CDS
TGGGTCTAAACTAGTTGCAA+AGG 0.577733 5_4:-7010328 Msa0833910:intron
AAGGCTGACAACACAATGAA+AGG 0.579807 5_4:-7009204 Msa0833910:three_prime_UTR
ATTTCAAAGAAGAGGATGAA+AGG 0.580176 5_4:-7010963 Msa0833910:intron
ATTATGTTTAGTAGCTCTGG+AGG 0.585207 5_4:+7009659 None:intergenic
AATCCCATCCACTTAGCTAT+CGG 0.586271 5_4:+7009999 None:intergenic
GGTGCGTGCAGTGGAGAGGA+GGG 0.589579 5_4:-7010463 Msa0833910:CDS
ATCACCGATAGCTAAGTGGA+TGG 0.589651 5_4:-7010003 Msa0833910:CDS
ATTCAGGTATACATAGGGTG+GGG 0.591010 5_4:+7009121 None:intergenic
CATATTTCCACTAACCATAC+GGG 0.594920 5_4:-7009372 Msa0833910:CDS
ATGACTCCAAATCTTGGGCA+AGG 0.595031 5_4:-7009515 Msa0833910:CDS
AGGTTGTCCATCTGAATAGG+AGG 0.597237 5_4:+7009932 None:intergenic
TACGGAAAAGGGTTACGCGC+AGG 0.600680 5_4:-7009885 Msa0833910:CDS
GTTGGTCATTGTGCTTTCCG+TGG 0.600904 5_4:-7009960 Msa0833910:CDS
CATGTTGTAATCGTGGGTGG+TGG 0.604156 5_4:-7011394 Msa0833910:CDS
GGACTCCGTTGATGGATCGA+TGG 0.604470 5_4:-7009607 Msa0833910:CDS
AAACATAATGAATTCTACAC+CGG 0.605859 5_4:-7009645 Msa0833910:CDS
TTGTGCTCTTGAGGATGCAG+TGG 0.611787 5_4:-7009486 Msa0833910:CDS
ATATTCAGGTATACATAGGG+TGG 0.615654 5_4:+7009119 None:intergenic
TTCGATCACCGATAGCTAAG+TGG 0.615756 5_4:-7010007 Msa0833910:CDS
TCAGAGTCACTTCGAACAGG+TGG 0.621486 5_4:-7011223 Msa0833910:CDS
CAAAGCCATCGATCCATCAA+CGG 0.623139 5_4:+7009602 None:intergenic
ATCTGAATTGAACATGTCCA+TGG 0.625416 5_4:-7011527 Msa0833910:exon
CTAGAGTTGAAACCTGTGAA+GGG 0.625644 5_4:+7011345 None:intergenic
TCACCGATAGCTAAGTGGAT+GGG 0.628133 5_4:-7010002 Msa0833910:CDS
GGTGCTAAAGAAGCAAGCTA+AGG 0.629803 5_4:-7009699 Msa0833910:CDS
GCTAGAGTTGAAACCTGTGA+AGG 0.639052 5_4:+7011344 None:intergenic
GATTGAACCAAGTCCAAATG+GGG 0.644561 5_4:-7010373 Msa0833910:CDS
ACGGATATTGTGCAGCCAAG+AGG 0.645003 5_4:-7010484 Msa0833910:intron
ACAATCTCGCCACCACTCAA+CGG 0.649290 5_4:-7011584 Msa0833910:five_prime_UTR
CTGAATAGGAGGCAAGTCCA+CGG 0.650582 5_4:+7009943 None:intergenic
CTTTGGGCCACATAAACTAG+TGG 0.652515 5_4:+7011622 None:intergenic
ATGGTGGTGAAGTCTGAGGA+TGG 0.653495 5_4:-7011006 Msa0833910:CDS
GAATATTGAATGCTATCAGG+AGG 0.654073 5_4:+7010411 None:intergenic
CTACAGGTATTACCGTTGAG+TGG 0.663266 5_4:+7011572 None:intergenic
GAAGGGATAGAGCAGTTGCA+AGG 0.666482 5_4:+7011362 None:intergenic
ATATCAGCTGTACAGGATGG+TGG 0.671683 5_4:-7011022 Msa0833910:intron
ACTCTACCTGCAGAAACAGG+TGG 0.672264 5_4:+7009566 None:intergenic
CAGGATGGTGGTGAAGTCTG+AGG 0.679338 5_4:-7011010 Msa0833910:CDS
TTTAAGAATCATAAAAGACG+AGG 0.685989 5_4:+7011495 None:intergenic
CAGGTATTACCGTTGAGTGG+TGG 0.692975 5_4:+7011575 None:intergenic
TTCCTAACAGAACACACCAG+CGG 0.695061 5_4:+7009314 None:intergenic
ATGGTTAGTGGAAATATGCG+CGG 0.713230 5_4:+7009377 None:intergenic
GAACATGTTGTAATCGTGGG+TGG 0.726429 5_4:-7011397 Msa0833910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTATTATCAAAGTTATTA+TGG + chr5_4:7009705-7009724 None:intergenic 15.0%
!! AATATTTATGAAATGCATAA+CGG - chr5_4:7010121-7010140 Msa0833910:intron 15.0%
!! TTGTAAATCTAATAAAATCA+TGG + chr5_4:7010372-7010391 None:intergenic 15.0%
!!! TTTTATTAGATTTACAAAGT+TGG - chr5_4:7010375-7010394 Msa0833910:CDS 15.0%
!! ATTAAGTTTATATCCTATAA+TGG + chr5_4:7011570-7011589 None:intergenic 15.0%
!! ACTCAATATTTAGAAATTCA+AGG - chr5_4:7009494-7009513 Msa0833910:CDS 20.0%
!! CTCAATATTTAGAAATTCAA+GGG - chr5_4:7009495-7009514 Msa0833910:CDS 20.0%
!!! TTTTCACTTCTTAATACAAT+GGG + chr5_4:7009996-7010015 None:intergenic 20.0%
!!! TTTTTCACTTCTTAATACAA+TGG + chr5_4:7009997-7010016 None:intergenic 20.0%
!! TATTAAGAAGTGAAAAATTG+TGG - chr5_4:7010000-7010019 Msa0833910:CDS 20.0%
!! ATTAAGAAGTGAAAAATTGT+GGG - chr5_4:7010001-7010020 Msa0833910:CDS 20.0%
!! TTTCGTTGTTAAATTATTGT+TGG - chr5_4:7010095-7010114 Msa0833910:intron 20.0%
!!! TCAATTTGTTAACACTTTTT+AGG + chr5_4:7010559-7010578 None:intergenic 20.0%
!! TATATATTCAGGTATACATA+GGG + chr5_4:7011511-7011530 None:intergenic 20.0%
!! TGAATATTGTGTATATATTC+AGG + chr5_4:7011522-7011541 None:intergenic 20.0%
!!! GTATTGAAATTTTCCATATT+TGG - chr5_4:7011593-7011612 Msa0833910:five_prime_UTR 20.0%
!! AATCATTAGGTTAAATAAAG+AGG + chr5_4:7011659-7011678 None:intergenic 20.0%
!!! TCTTTATTTAACCTAATGAT+TGG - chr5_4:7011658-7011677 Msa0833910:five_prime_UTR 20.0%
! TTTAAGAATCATAAAAGACG+AGG + chr5_4:7009132-7009151 None:intergenic 25.0%
! AATATATGCATTGTGCAATA+AGG + chr5_4:7009559-7009578 None:intergenic 25.0%
! TTATCCACACATCATATATA+TGG + chr5_4:7009883-7009902 None:intergenic 25.0%
!! ATCTTAGATATTTTCACTAC+TGG - chr5_4:7009914-7009933 Msa0833910:CDS 25.0%
! TCAAATGATAAAATGATGCA+TGG + chr5_4:7010048-7010067 None:intergenic 25.0%
!!! TATCATTTGAGTTGTACTAA+TGG - chr5_4:7010058-7010077 Msa0833910:intron 25.0%
!!! ATCATTTGAGTTGTACTAAT+GGG - chr5_4:7010059-7010078 Msa0833910:intron 25.0%
! ATAGCATTCAATATTCTTCA+CGG - chr5_4:7010220-7010239 Msa0833910:intron 25.0%
!! AGGTTAGTCATTGTAATTTA+TGG - chr5_4:7010316-7010335 Msa0833910:intron 25.0%
! ATTGTAATTTATGGTGTGTT+TGG - chr5_4:7010325-7010344 Msa0833910:intron 25.0%
! GAATTATGTTTAAACACAGT+CGG + chr5_4:7010425-7010444 None:intergenic 25.0%
! TATTAATCTAACCACATGAT+TGG - chr5_4:7010465-7010484 Msa0833910:CDS 25.0%
! TATTACAATCTGTTTAGACA+TGG + chr5_4:7010584-7010603 None:intergenic 25.0%
! ATGTCTAAACAGATTGTAAT+AGG - chr5_4:7010583-7010602 Msa0833910:intron 25.0%
! TGTCTAAACAGATTGTAATA+GGG - chr5_4:7010584-7010603 Msa0833910:intron 25.0%
! GTTACTAATAAGTCCATATA+TGG - chr5_4:7010827-7010846 Msa0833910:intron 25.0%
! TCAGGTAATTTAACCATATA+TGG + chr5_4:7010843-7010862 None:intergenic 25.0%
! TTCATATGAACAATAAACTC+AGG + chr5_4:7010861-7010880 None:intergenic 25.0%
! TGAAAAATAGTTGAGTTCAA+TGG - chr5_4:7010877-7010896 Msa0833910:intron 25.0%
! AAACATAATGAATTCTACAC+CGG - chr5_4:7010979-7010998 Msa0833910:CDS 25.0%
! GTATATATTCAGGTATACAT+AGG + chr5_4:7011512-7011531 None:intergenic 25.0%
! TTTATATCCTATAATGGTCA+TGG + chr5_4:7011564-7011583 None:intergenic 25.0%
! CTAGCACTTATAAAGTTATA+TGG - chr5_4:7011626-7011645 Msa0833910:five_prime_UTR 25.0%
CAGAAGTTCCAAATTAATCA+AGG - chr5_4:7009184-7009203 Msa0833910:three_prime_UTR 30.0%
AGATTGAGCCTTGATTAATT+TGG + chr5_4:7009195-7009214 None:intergenic 30.0%
!! ATCCTCTTCTTTGAAATTGA+AGG + chr5_4:7009658-7009677 None:intergenic 30.0%
ATTTCAAAGAAGAGGATGAA+AGG - chr5_4:7009661-7009680 Msa0833910:CDS 30.0%
GTTAGTGCAGTATTTGATAT+TGG - chr5_4:7009821-7009840 Msa0833910:intron 30.0%
! ATTTGATATTGGTGCTTGAT+AGG - chr5_4:7009832-7009851 Msa0833910:CDS 30.0%
!!! TATATGGATGGACCTTTTTT+TGG + chr5_4:7009867-7009886 None:intergenic 30.0%
! TTTTCTTCTTCCTACCAAAT+AGG - chr5_4:7009952-7009971 Msa0833910:CDS 30.0%
ATAAAATGATGCATGGACAT+CGG + chr5_4:7010041-7010060 None:intergenic 30.0%
GAAGAATATTGAATGCTATC+AGG + chr5_4:7010219-7010238 None:intergenic 30.0%
! AAGTTGGTTGACAAAACATT+TGG - chr5_4:7010391-7010410 Msa0833910:CDS 30.0%
! TTTTGTGCAGTATGTTTTCA+GGG + chr5_4:7010497-7010516 None:intergenic 30.0%
TGAATTACATCTACGGAAAA+GGG - chr5_4:7010728-7010747 Msa0833910:intron 30.0%
TTCATTATGTTTAGTAGCTC+TGG + chr5_4:7010971-7010990 None:intergenic 30.0%
GTCTACAAAGATGAAAATCA+AGG - chr5_4:7011401-7011420 Msa0833910:CDS 30.0%
ATTGTTGTGATTTCAAGAGT+TGG - chr5_4:7011444-7011463 Msa0833910:CDS 30.0%
TTGTTGTGATTTCAAGAGTT+GGG - chr5_4:7011445-7011464 Msa0833910:CDS 30.0%
AGAAATACCATGACCATTAT+AGG - chr5_4:7011554-7011573 Msa0833910:five_prime_UTR 30.0%
TAGCTGTATGTATCCAAATA+TGG + chr5_4:7011609-7011628 None:intergenic 30.0%
!!! GTAGTGGATACGTTTTGTTT+TGG + chr5_4:7008983-7009002 None:intergenic 35.0%
ATCTGAATTGAACATGTCCA+TGG - chr5_4:7009097-7009116 Msa0833910:three_prime_UTR 35.0%
! CGATTACAACATGTTCCTTT+TGG + chr5_4:7009223-7009242 None:intergenic 35.0%
AAAGGAACATGTTGTAATCG+TGG - chr5_4:7009223-7009242 Msa0833910:exon 35.0%
AAGGAACATGTTGTAATCGT+GGG - chr5_4:7009224-7009243 Msa0833910:exon 35.0%
TGGAGTGTACTTGATTCAAT+TGG - chr5_4:7009452-7009471 Msa0833910:CDS 35.0%
GTTCATAATATCAGCTGTAC+AGG - chr5_4:7009595-7009614 Msa0833910:CDS 35.0%
ATAATATCAGCTGTACAGGA+TGG - chr5_4:7009599-7009618 Msa0833910:CDS 35.0%
TGCCTTCAATTTCAAAGAAG+AGG - chr5_4:7009653-7009672 Msa0833910:CDS 35.0%
!! ACATTTTCAGTCAGAAGTGT+TGG + chr5_4:7009736-7009755 None:intergenic 35.0%
ACTTCTGACTGAAAATGTGT+TGG - chr5_4:7009738-7009757 Msa0833910:intron 35.0%
! CTTGTGTTGGTATCAAACAT+TGG + chr5_4:7009777-7009796 None:intergenic 35.0%
CCACACATCATATATATGGA+TGG + chr5_4:7009879-7009898 None:intergenic 35.0%
CCATCCATATATATGATGTG+TGG - chr5_4:7009876-7009895 Msa0833910:CDS 35.0%
TAAAATGATGCATGGACATC+GGG + chr5_4:7010040-7010059 None:intergenic 35.0%
TTGTACTAATGGGACGTTAT+TGG - chr5_4:7010069-7010088 Msa0833910:intron 35.0%
GAATATTGAATGCTATCAGG+AGG + chr5_4:7010216-7010235 None:intergenic 35.0%
CATTCAATATTCTTCACGGT+TGG - chr5_4:7010224-7010243 Msa0833910:intron 35.0%
AAGATTGAACCAAGTCCAAA+TGG - chr5_4:7010249-7010268 Msa0833910:intron 35.0%
AGATTGAACCAAGTCCAAAT+GGG - chr5_4:7010250-7010269 Msa0833910:intron 35.0%
GGATACCTTATTGGAATTCT+TGG - chr5_4:7010272-7010291 Msa0833910:intron 35.0%
ACCTTATTGGAATTCTTGGA+TGG - chr5_4:7010276-7010295 Msa0833910:intron 35.0%
CCTTATTGGAATTCTTGGAT+GGG - chr5_4:7010277-7010296 Msa0833910:intron 35.0%
! CTTTTGTGCAGTATGTTTTC+AGG + chr5_4:7010498-7010517 None:intergenic 35.0%
CTGAAAACATACTGCACAAA+AGG - chr5_4:7010496-7010515 Msa0833910:intron 35.0%
TAGGACTAAAGCTTCAGAAT+TGG + chr5_4:7010540-7010559 None:intergenic 35.0%
! TTTTCTGAGCCAAAGTTTGT+TGG - chr5_4:7010646-7010665 Msa0833910:intron 35.0%
AAAAGGTTGTCCATCTGAAT+AGG + chr5_4:7010698-7010717 None:intergenic 35.0%
GTGAATTACATCTACGGAAA+AGG - chr5_4:7010727-7010746 Msa0833910:intron 35.0%
ATAAACCAGTAGACTTTGGT+TGG + chr5_4:7010781-7010800 None:intergenic 35.0%
TGGACTTATTAGTAACAACC+TGG + chr5_4:7010823-7010842 None:intergenic 35.0%
AAATAGTTGAGTTCAATGGC+AGG - chr5_4:7010881-7010900 Msa0833910:intron 35.0%
!! ATTATGTTTAGTAGCTCTGG+AGG + chr5_4:7010968-7010987 None:intergenic 35.0%
!! GAAGACGCTTTTAGAGAATA+TGG - chr5_4:7011211-7011230 Msa0833910:CDS 35.0%
GAGAATATGGCAATGAAAGA+TGG - chr5_4:7011224-7011243 Msa0833910:CDS 35.0%
GCATATTTCCACTAACCATA+CGG - chr5_4:7011251-7011270 Msa0833910:CDS 35.0%
CATATTTCCACTAACCATAC+GGG - chr5_4:7011252-7011271 Msa0833910:CDS 35.0%
TTGTCATACCTAAGCTAGTA+AGG - chr5_4:7011338-7011357 Msa0833910:intron 35.0%
TGTTGTGATTTCAAGAGTTG+GGG - chr5_4:7011446-7011465 Msa0833910:CDS 35.0%
TATTCAGGTATACATAGGGT+GGG + chr5_4:7011507-7011526 None:intergenic 35.0%
ATATTCAGGTATACATAGGG+TGG + chr5_4:7011508-7011527 None:intergenic 35.0%
! TCCACTACCACTAGTTTATG+TGG - chr5_4:7008995-7009014 Msa0833910:three_prime_UTR 40.0%
TGTGTTGTGTGTTCAGCTTT+GGG + chr5_4:7009021-7009040 None:intergenic 40.0%
TGATTGTAGCTACTAGCTAC+AGG + chr5_4:7009071-7009090 None:intergenic 40.0%
CCAATTCTGGTATGACAAGT+TGG + chr5_4:7009158-7009177 None:intergenic 40.0%
CCAACTTGTCATACCAGAAT+TGG - chr5_4:7009155-7009174 Msa0833910:three_prime_UTR 40.0%
CTAGAGTTGAAACCTGTGAA+GGG + chr5_4:7009282-7009301 None:intergenic 40.0%
TTGTGTTGAATTCTCAGGCT+TGG - chr5_4:7009353-7009372 Msa0833910:CDS 40.0%
!! TCACTCACCCTTTTCAAGAA+TGG - chr5_4:7009428-7009447 Msa0833910:CDS 40.0%
!! CACTCACCCTTTTCAAGAAT+GGG - chr5_4:7009429-7009448 Msa0833910:CDS 40.0%
ACTCCACCCATTCTTGAAAA+GGG + chr5_4:7009438-7009457 None:intergenic 40.0%
TATATTAGCTGAGCTTGAGC+TGG - chr5_4:7009573-7009592 Msa0833910:CDS 40.0%
TCAGTGTCATGTACTTGTGT+TGG + chr5_4:7009790-7009809 None:intergenic 40.0%
AGGTCCATCCTACCAAAAAA+AGG - chr5_4:7009852-7009871 Msa0833910:CDS 40.0%
!!! TGGACCTTTTTTTGGTAGGA+TGG + chr5_4:7009859-7009878 None:intergenic 40.0%
!!! TGGATGGACCTTTTTTTGGT+AGG + chr5_4:7009863-7009882 None:intergenic 40.0%
AAAATGATGCATGGACATCG+GGG + chr5_4:7010039-7010058 None:intergenic 40.0%
!!! GAGGGTACTTTTGGAAACTT+TGG - chr5_4:7010179-7010198 Msa0833910:intron 40.0%
GATTGAACCAAGTCCAAATG+GGG - chr5_4:7010251-7010270 Msa0833910:intron 40.0%
TCCAAATGGGGATACCTTAT+TGG - chr5_4:7010263-7010282 Msa0833910:intron 40.0%
! TCCAATAAGGTATCCCCATT+TGG + chr5_4:7010267-7010286 None:intergenic 40.0%
CCCATCCAAGAATTCCAATA+AGG + chr5_4:7010280-7010299 None:intergenic 40.0%
TGGGTCTAAACTAGTTGCAA+AGG - chr5_4:7010296-7010315 Msa0833910:intron 40.0%
AATCCCATCCACTTAGCTAT+CGG + chr5_4:7010628-7010647 None:intergenic 40.0%
GCACAATGACCAACAAACTT+TGG + chr5_4:7010658-7010677 None:intergenic 40.0%
!!! ATGGACAACCTTTTGAAGCA+CGG - chr5_4:7010704-7010723 Msa0833910:intron 40.0%
TAATTCACCCGTGCTTCAAA+AGG + chr5_4:7010715-7010734 None:intergenic 40.0%
TAGACTTTGGTTGGAGAAAC+AGG + chr5_4:7010772-7010791 None:intergenic 40.0%
TTTCTCCAACCAAAGTCTAC+TGG - chr5_4:7010773-7010792 Msa0833910:intron 40.0%
GCAGATAAACCAGTAGACTT+TGG + chr5_4:7010785-7010804 None:intergenic 40.0%
TCCTAAAATAACCGAGCCAT+CGG - chr5_4:7010904-7010923 Msa0833910:intron 40.0%
CTAAGGATCTAGTGGAAAAC+TGG - chr5_4:7010942-7010961 Msa0833910:intron 40.0%
GTCCTGATTATAGTGTCATC+CGG + chr5_4:7011001-7011020 None:intergenic 40.0%
TATAATCAGGACTCCGTTGA+TGG - chr5_4:7011009-7011028 Msa0833910:CDS 40.0%
! GAAACAGGTGGACTTATTGA+TGG + chr5_4:7011049-7011068 None:intergenic 40.0%
ACCCAATGACTCCAAATCTT+GGG - chr5_4:7011104-7011123 Msa0833910:intron 40.0%
ATGGTTAGTGGAAATATGCG+CGG + chr5_4:7011250-7011269 None:intergenic 40.0%
ATACCTAAGCTAGTAAGGCT+TGG - chr5_4:7011343-7011362 Msa0833910:intron 40.0%
AAATTAGTGTGCTCCAGCAA+TGG + chr5_4:7011370-7011389 None:intergenic 40.0%
AAGGCTGACAACACAATGAA+AGG - chr5_4:7011420-7011439 Msa0833910:CDS 40.0%
ATTCAGGTATACATAGGGTG+GGG + chr5_4:7011506-7011525 None:intergenic 40.0%
GCCACATAAACTAGTGGTAG+TGG + chr5_4:7008999-7009018 None:intergenic 45.0%
CTTTGGGCCACATAAACTAG+TGG + chr5_4:7009005-7009024 None:intergenic 45.0%
GTGTGTTGTGTGTTCAGCTT+TGG + chr5_4:7009022-7009041 None:intergenic 45.0%
CTACAGGTATTACCGTTGAG+TGG + chr5_4:7009055-7009074 None:intergenic 45.0%
! ACTTCTGAGAGCTCCAATTC+TGG + chr5_4:7009171-7009190 None:intergenic 45.0%
GGCTCAATCTTCAGTCCAAA+AGG - chr5_4:7009205-7009224 Msa0833910:three_prime_UTR 45.0%
GAACATGTTGTAATCGTGGG+TGG - chr5_4:7009227-7009246 Msa0833910:exon 45.0%
GCTAGAGTTGAAACCTGTGA+AGG + chr5_4:7009283-7009302 None:intergenic 45.0%
CCTGAGAATTCAACACAAGC+AGG + chr5_4:7009351-7009370 None:intergenic 45.0%
CCTGCTTGTGTTGAATTCTC+AGG - chr5_4:7009348-7009367 Msa0833910:CDS 45.0%
!! GAATTCTCAGGCTTGGTGTT+CGG - chr5_4:7009360-7009379 Msa0833910:CDS 45.0%
!! TCACCCTTTTCAAGAATGGG+TGG - chr5_4:7009432-7009451 Msa0833910:CDS 45.0%
CACTCCACCCATTCTTGAAA+AGG + chr5_4:7009439-7009458 None:intergenic 45.0%
ATATCAGCTGTACAGGATGG+TGG - chr5_4:7009602-7009621 Msa0833910:CDS 45.0%
!! AGTTTTGCCACTGGCCTATT+TGG + chr5_4:7009969-7009988 None:intergenic 45.0%
! AAGGTATCCCCATTTGGACT+TGG + chr5_4:7010261-7010280 None:intergenic 45.0%
CAGGGTCATAACCAATCATG+TGG + chr5_4:7010479-7010498 None:intergenic 45.0%
CAGATTGTAATAGGGTGCGA+TGG - chr5_4:7010592-7010611 Msa0833910:intron 45.0%
TTCGATCACCGATAGCTAAG+TGG - chr5_4:7010617-7010636 Msa0833910:intron 45.0%
ATCACCGATAGCTAAGTGGA+TGG - chr5_4:7010621-7010640 Msa0833910:intron 45.0%
TCACCGATAGCTAAGTGGAT+GGG - chr5_4:7010622-7010641 Msa0833910:intron 45.0%
AGGTTGTCCATCTGAATAGG+AGG + chr5_4:7010695-7010714 None:intergenic 45.0%
!!! TGGACAACCTTTTGAAGCAC+GGG - chr5_4:7010705-7010724 Msa0833910:intron 45.0%
GCACGGGTGAATTACATCTA+CGG - chr5_4:7010721-7010740 Msa0833910:intron 45.0%
TGCTTCAACAGTTCATCTCC+AGG - chr5_4:7010802-7010821 Msa0833910:intron 45.0%
!!! ACCGATGGCTCGGTTATTTT+AGG + chr5_4:7010908-7010927 None:intergenic 45.0%
GGTGCTAAAGAAGCAAGCTA+AGG - chr5_4:7010925-7010944 Msa0833910:intron 45.0%
GAAGCAAGCTAAGGATCTAG+TGG - chr5_4:7010934-7010953 Msa0833910:intron 45.0%
CACCGGATGACACTATAATC+AGG - chr5_4:7010996-7011015 Msa0833910:CDS 45.0%
CAAAGCCATCGATCCATCAA+CGG + chr5_4:7011025-7011044 None:intergenic 45.0%
!! ATAAGTCCACCTGTTTCTGC+AGG - chr5_4:7011052-7011071 Msa0833910:intron 45.0%
ACAACTCTACCTGCAGAAAC+AGG + chr5_4:7011064-7011083 None:intergenic 45.0%
CACCCAATGACTCCAAATCT+TGG - chr5_4:7011103-7011122 Msa0833910:intron 45.0%
! GCCCAAGATTTGGAGTCATT+GGG + chr5_4:7011108-7011127 None:intergenic 45.0%
! TGCCCAAGATTTGGAGTCAT+TGG + chr5_4:7011109-7011128 None:intergenic 45.0%
ATGACTCCAAATCTTGGGCA+AGG - chr5_4:7011109-7011128 Msa0833910:intron 45.0%
ATGTTTGCCCGTATGGTTAG+TGG + chr5_4:7011262-7011281 None:intergenic 45.0%
AACCATACGGGCAAACATTG+TGG - chr5_4:7011264-7011283 Msa0833910:intron 45.0%
ACCATACGGGCAAACATTGT+GGG - chr5_4:7011265-7011284 Msa0833910:intron 45.0%
TTCCTAACAGAACACACCAG+CGG + chr5_4:7011313-7011332 None:intergenic 45.0%
ACAATCTCGCCACCACTCAA+CGG - chr5_4:7009040-7009059 Msa0833910:three_prime_UTR 50.0%
CAGGTATTACCGTTGAGTGG+TGG + chr5_4:7009052-7009071 None:intergenic 50.0%
AGACGAGGTTGTTGTAGCCA+TGG + chr5_4:7009117-7009136 None:intergenic 50.0%
CATGTTGTAATCGTGGGTGG+TGG - chr5_4:7009230-7009249 Msa0833910:exon 50.0%
GAAGGGATAGAGCAGTTGCA+AGG + chr5_4:7009265-7009284 None:intergenic 50.0%
CAACTGCTCTATCCCTTCAC+AGG - chr5_4:7009267-7009286 Msa0833910:CDS 50.0%
CAGTCAGAGTCACTTCGAAC+AGG - chr5_4:7009398-7009417 Msa0833910:CDS 50.0%
TCAGAGTCACTTCGAACAGG+TGG - chr5_4:7009401-7009420 Msa0833910:CDS 50.0%
! ATGGTGGTGAAGTCTGAGGA+TGG - chr5_4:7009618-7009637 Msa0833910:CDS 50.0%
CTTCCTACCAAATAGGCCAG+TGG - chr5_4:7009959-7009978 Msa0833910:CDS 50.0%
! TTGCCACTGGCCTATTTGGT+AGG + chr5_4:7009965-7009984 None:intergenic 50.0%
ACGGATATTGTGCAGCCAAG+AGG - chr5_4:7010140-7010159 Msa0833910:intron 50.0%
!!! AGTGGAGAGGAGGGTACTTT+TGG - chr5_4:7010170-7010189 Msa0833910:intron 50.0%
GTTGGTCATTGTGCTTTCCG+TGG - chr5_4:7010664-7010683 Msa0833910:intron 50.0%
CTGAATAGGAGGCAAGTCCA+CGG + chr5_4:7010684-7010703 None:intergenic 50.0%
GGACTTGCCTCCTATTCAGA+TGG - chr5_4:7010685-7010704 Msa0833910:intron 50.0%
!! CTTCTTTAGCACCGATGGCT+CGG + chr5_4:7010918-7010937 None:intergenic 50.0%
! GCTTGCTTCTTTAGCACCGA+TGG + chr5_4:7010923-7010942 None:intergenic 50.0%
! CGTTGATGGATCGATGGCTT+TGG - chr5_4:7011023-7011042 Msa0833910:intron 50.0%
ACTCTACCTGCAGAAACAGG+TGG + chr5_4:7011061-7011080 None:intergenic 50.0%
GCAGGTAGAGTTGTACTCGT+TGG - chr5_4:7011070-7011089 Msa0833910:intron 50.0%
! ATTTGGAGTCATTGGGTGCC+AGG + chr5_4:7011101-7011120 None:intergenic 50.0%
CATGCTCCTTGCCCAAGATT+TGG + chr5_4:7011118-7011137 None:intergenic 50.0%
! AGGAGCATGTTGTGCTCTTG+AGG - chr5_4:7011129-7011148 Msa0833910:intron 50.0%
TTGTGCTCTTGAGGATGCAG+TGG - chr5_4:7011138-7011157 Msa0833910:CDS 50.0%
ACCCACAATGTTTGCCCGTA+TGG + chr5_4:7011269-7011288 None:intergenic 50.0%
ACGGGCAAACATTGTGGGTT+CGG - chr5_4:7011270-7011289 Msa0833910:intron 50.0%
TTGTGGGTTCGGCTTTGCAA+TGG - chr5_4:7011281-7011300 Msa0833910:intron 50.0%
TGTGGGTTCGGCTTTGCAAT+GGG - chr5_4:7011282-7011301 Msa0833910:intron 50.0%
TCCTAACAGAACACACCAGC+GGG + chr5_4:7011312-7011331 None:intergenic 50.0%
! GGACCAAGCCTTACTAGCTT+AGG + chr5_4:7011349-7011368 None:intergenic 50.0%
! AGTAAGGCTTGGTCCATTGC+TGG - chr5_4:7011354-7011373 Msa0833910:intron 50.0%
TGGTGTTCGGTCTCTTGTGC+TGG - chr5_4:7009373-7009392 Msa0833910:CDS 55.0%
! CAGGATGGTGGTGAAGTCTG+AGG - chr5_4:7009614-7009633 Msa0833910:CDS 55.0%
! ATGGGTGCGAGTTTTGCCAC+TGG + chr5_4:7009978-7009997 None:intergenic 55.0%
ATGCATGGACATCGGGGAGT+GGG + chr5_4:7010033-7010052 None:intergenic 55.0%
TACGGAAAAGGGTTACGCGC+AGG - chr5_4:7010739-7010758 Msa0833910:intron 55.0%
! GGACTCCGTTGATGGATCGA+TGG - chr5_4:7011017-7011036 Msa0833910:intron 55.0%
TTGTACTCGTTGGAGACGCC+TGG - chr5_4:7011080-7011099 Msa0833910:intron 55.0%
TTTGCAATGGGACAACCCGC+TGG - chr5_4:7011294-7011313 Msa0833910:intron 55.0%
ACCCGCTGGTGTGTTCTGTT+AGG - chr5_4:7011308-7011327 Msa0833910:intron 55.0%
! ATCGTGGGTGGTGGCATTGC+AGG - chr5_4:7009239-7009258 Msa0833910:CDS 60.0%
GATGCATGGACATCGGGGAG+TGG + chr5_4:7010034-7010053 None:intergenic 60.0%
TCTCCACTGCACGCACCTCT+TGG + chr5_4:7010158-7010177 None:intergenic 60.0%
! AAGAGGTGCGTGCAGTGGAG+AGG - chr5_4:7010157-7010176 Msa0833910:intron 60.0%
! CAGCCAAGAGGTGCGTGCAG+TGG - chr5_4:7010152-7010171 Msa0833910:intron 65.0%
AGGTGCGTGCAGTGGAGAGG+AGG - chr5_4:7010160-7010179 Msa0833910:intron 65.0%
GGTGCGTGCAGTGGAGAGGA+GGG - chr5_4:7010161-7010180 Msa0833910:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 7008957 7011689 7008957 ID=Msa0833910;Name=Msa0833910
chr5_4 mRNA 7008957 7011689 7008957 ID=Msa0833910-mRNA-1;Parent=Msa0833910;Name=Msa0833910-mRNA-1;_AED=0.27;_eAED=0.27;_QI=153|1|1|1|1|1|6|275|431
chr5_4 exon 7008957 7009743 7008957 ID=Msa0833910-mRNA-1:exon:3114;Parent=Msa0833910-mRNA-1
chr5_4 exon 7009823 7010051 7009823 ID=Msa0833910-mRNA-1:exon:3113;Parent=Msa0833910-mRNA-1
chr5_4 exon 7010329 7010491 7010329 ID=Msa0833910-mRNA-1:exon:3112;Parent=Msa0833910-mRNA-1
chr5_4 exon 7010964 7011029 7010964 ID=Msa0833910-mRNA-1:exon:3111;Parent=Msa0833910-mRNA-1
chr5_4 exon 7011130 7011276 7011130 ID=Msa0833910-mRNA-1:exon:3110;Parent=Msa0833910-mRNA-1
chr5_4 exon 7011358 7011689 7011358 ID=Msa0833910-mRNA-1:exon:3109;Parent=Msa0833910-mRNA-1
chr5_4 five_prime_UTR 7011537 7011689 7011537 ID=Msa0833910-mRNA-1:five_prime_utr;Parent=Msa0833910-mRNA-1
chr5_4 CDS 7011358 7011536 7011358 ID=Msa0833910-mRNA-1:cds;Parent=Msa0833910-mRNA-1
chr5_4 CDS 7011130 7011276 7011130 ID=Msa0833910-mRNA-1:cds;Parent=Msa0833910-mRNA-1
chr5_4 CDS 7010964 7011029 7010964 ID=Msa0833910-mRNA-1:cds;Parent=Msa0833910-mRNA-1
chr5_4 CDS 7010329 7010491 7010329 ID=Msa0833910-mRNA-1:cds;Parent=Msa0833910-mRNA-1
chr5_4 CDS 7009823 7010051 7009823 ID=Msa0833910-mRNA-1:cds;Parent=Msa0833910-mRNA-1
chr5_4 CDS 7009232 7009743 7009232 ID=Msa0833910-mRNA-1:cds;Parent=Msa0833910-mRNA-1
chr5_4 three_prime_UTR 7008957 7009231 7008957 ID=Msa0833910-mRNA-1:three_prime_utr;Parent=Msa0833910-mRNA-1
Gene Sequence

>Msa0833910

ATGTCCATGGCTACAACAACCTCGTCTTTTATGATTCTTAAATCTCCAACTTGTCATACCAGAATTGGAGCTCTCAGAAGTTCCAAATTAATCAAGGCTCAATCTTCAGTCCAAAAGGAACATGTTGTAATCGTGGGTGGTGGCATTGCAGGCCTTGCAACTGCTCTATCCCTTCACAGGCTTGGTGTTCGGTCTCTTGTGCTGGAGCAGTCAGAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAGAATGGGTGGAGTGTACTTGATTCAATTGGAGTAGCTAATTATCTTAGAACTCAATATTTAGAAATTCAAGGGATGGTGGTGAAGTCTGAGGATGGAAGAGAACTACGTGCCTTCAATTTCAAAGAAGAGGATGAAAGCCAAGAGGTGCGTGCAGTGGAGAGGAGGGTACTTTTGGAAACTTTGGCTGCTCAGTTGCCTCCTGATAGCATTCAATATTCTTCACGGTTGGTCAAGATTGAACCAAGTCCAAATGGGGATACCTTATTGGAATTCTTGGATGGGTCTAAACTAGTTGCAAAGATTGTAATAGGGTGCGATGGAATTCGATCACCGATAGCTAAGTGGATGGGATTTTCTGAGCCAAAGTTTGTTGGTCATTGTGCTTTCCGTGGACTTGCCTCCTATTCAGATGGACAACCTTTTGAAGCACGGGTGAATTACATCTACGGAAAAGGGTTACGCGCAGGATACGTTCCTGTTTCTCCAACCAAAGTCTACTGGTTTATCTGCTTCAACAGTTCATCTCCAGGTCCTAAAATAACCGAGCCATCGGTGCTAAAGAAGCAAGCTAAGGATCTAGTGGAAAACTGGCCTCCAGAGCTACTAAACATAATGAATTCTACACCGGATGACACTATAATCAGGACTCCGTTGATGGATCGATGGCTTTGGCCATCAATAAGTCCACCTGTTTCTGCAGGTAGAGTTGTACTCGTTGGAGACGCCTGGCACCCAATGACTCCAAATCTTGGGCAAGGAGCATGTTGTGCTCTTGAGGATGCAGTGGTTCTTGCTAAAAAGCTTGCTGCAGCAATCGATTCTGATGATGCTTCTATCGAAGACGCTTTTAGAGAATATGGCAATGAAAGATGGCCGCGCATATTTCCACTAACCATACGGGCAAACATTGTGGGTTCGGCTTTGCAATGGGACAACCCGCTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTAAGGCTTGGTCCATTGCTGGAGCACACTAATTTTACTAGTGAGAGTCTACAAAGATGA

Protein sequence

>Msa0833910

MSMATTTSSFMILKSPTCHTRIGALRSSKLIKAQSSVQKEHVVIVGGGIAGLATALSLHRLGVRSLVLEQSESLRTGGTSLTLFKNGWSVLDSIGVANYLRTQYLEIQGMVVKSEDGRELRAFNFKEEDESQEVRAVERRVLLETLAAQLPPDSIQYSSRLVKIEPSPNGDTLLEFLDGSKLVAKIVIGCDGIRSPIAKWMGFSEPKFVGHCAFRGLASYSDGQPFEARVNYIYGKGLRAGYVPVSPTKVYWFICFNSSSPGPKITEPSVLKKQAKDLVENWPPELLNIMNSTPDDTIIRTPLMDRWLWPSISPPVSAGRVVLVGDAWHPMTPNLGQGACCALEDAVVLAKKLAAAIDSDDASIEDAFREYGNERWPRIFPLTIRANIVGSALQWDNPLVCSVRNNIVIPKLVRLGPLLEHTNFTSESLQR*