AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0690920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690920 MtrunA17_Chr4g0039791 97.513 563 12 1 1 563 1 561 0.0 1119
Msa0690920 MtrunA17_Chr5g0409771 79.821 560 107 2 4 563 2 555 0.0 912
Msa0690920 MtrunA17_Chr5g0409791 79.720 572 99 3 4 563 2 568 0.0 905
Msa0690920 MtrunA17_Chr1g0157401 45.321 545 287 5 26 563 20 560 1.08e-160 469
Msa0690920 MtrunA17_Chr8g0353341 44.163 514 270 6 26 526 17 526 2.09e-144 427
Msa0690920 MtrunA17_Chr1g0197391 44.784 556 277 12 26 563 27 570 9.39e-142 422
Msa0690920 MtrunA17_Chr4g0028411 41.651 533 295 8 31 555 10 534 1.76e-133 399
Msa0690920 MtrunA17_Chr3g0116251 41.600 500 273 6 60 555 64 548 4.88e-130 391
Msa0690920 MtrunA17_Chr3g0116271 43.173 498 263 9 64 555 67 550 5.48e-130 391
Msa0690920 MtrunA17_Chr1g0180551 40.619 549 301 9 24 555 73 613 3.71e-129 391
Msa0690920 MtrunA17_Chr2g0327341 39.556 541 308 7 31 563 10 539 1.62e-128 387
Msa0690920 MtrunA17_Chr1g0180541 39.963 543 309 7 24 555 4 540 4.78e-125 378
Msa0690920 MtrunA17_Chr1g0186071 39.802 505 270 10 60 555 69 548 5.66e-110 340
Msa0690920 MtrunA17_Chr4g0072561 38.583 508 296 10 64 563 49 548 4.57e-105 327
Msa0690920 MtrunA17_Chr4g0000461 39.098 532 308 11 36 561 19 540 4.52e-103 321
Msa0690920 MtrunA17_Chr5g0395431 38.690 504 298 7 64 561 87 585 2.62e-100 315
Msa0690920 MtrunA17_Chr3g0102411 34.186 547 338 8 26 563 8 541 2.27e-99 312
Msa0690920 MtrunA17_Chr2g0334131 46.643 283 146 4 283 561 1 282 2.04e-77 246
Msa0690920 MtrunA17_Chr1g0157431 39.701 335 191 5 26 353 20 350 6.92e-68 228
Msa0690920 MtrunA17_Chr6g0471921 31.936 501 293 16 74 553 32 505 1.43e-54 192
Msa0690920 MtrunA17_Chr5g0433241 29.014 517 318 14 75 557 41 542 6.90e-46 169
Msa0690920 MtrunA17_Chr3g0109731 27.477 535 317 16 70 556 36 547 5.26e-41 156
Msa0690920 MtrunA17_Chr5g0433231 28.190 525 323 16 70 557 36 543 2.85e-40 154
Msa0690920 MtrunA17_Chr6g0471311 29.223 373 228 9 204 556 188 544 6.90e-39 150
Msa0690920 MtrunA17_Chr8g0370701 28.627 517 312 19 86 563 94 592 7.61e-37 144
Msa0690920 MtrunA17_Chr5g0433221 26.908 524 329 16 70 556 36 542 2.94e-35 139
Msa0690920 MtrunA17_Chr5g0396331 28.119 505 304 18 86 556 52 531 2.79e-34 136
Msa0690920 MtrunA17_Chr2g0301671 30.707 368 216 11 212 556 201 552 2.64e-33 134
Msa0690920 MtrunA17_Chr5g0396311 27.400 500 318 14 86 557 52 534 2.13e-32 131
Msa0690920 MtrunA17_Chr5g0406681 25.665 526 343 16 66 561 60 567 2.27e-32 131
Msa0690920 MtrunA17_Chr2g0292471 25.777 547 312 14 77 556 31 550 2.66e-32 130
Msa0690920 MtrunA17_Chr8g0370731 28.191 376 223 12 206 557 137 489 7.39e-31 126
Msa0690920 MtrunA17_Chr4g0068151 25.143 525 331 15 75 556 47 552 4.69e-30 124
Msa0690920 MtrunA17_Chr4g0028451 45.794 107 49 1 421 527 10 107 6.39e-26 102
Msa0690920 MtrunA17_Chr1g0205711 24.717 530 307 15 27 480 55 568 3.47e-25 110
Msa0690920 MtrunA17_Chr4g0004101 26.154 325 212 8 262 562 10 330 7.50e-25 105
Msa0690920 MtrunA17_Chr7g0252691 23.866 595 393 18 8 563 154 727 3.20e-24 107
Msa0690920 MtrunA17_Chr4g0004841 26.950 282 182 7 300 562 63 339 4.51e-24 103
Msa0690920 MtrunA17_Chr1g0160041 30.088 339 169 15 206 483 250 581 1.75e-23 105
Msa0690920 MtrunA17_Chr3g0121931 25.688 545 295 18 63 503 94 632 1.86e-22 101
Msa0690920 MtrunA17_Chr5g0396691 25.047 535 312 19 28 485 22 544 1.55e-21 99.0
Msa0690920 MtrunA17_Chr7g0270221 25.992 504 286 18 43 490 36 508 1.03e-20 96.3
Msa0690920 MtrunA17_Chr5g0396711 24.798 496 297 16 56 485 59 544 1.32e-20 95.9
Msa0690920 MtrunA17_Chr8g0388081 25.532 470 276 16 75 480 19 478 4.29e-20 94.0
Msa0690920 MtrunA17_Chr1g0194371 24.521 522 311 17 43 490 36 548 3.31e-19 91.7
Msa0690920 MtrunA17_Chr3g0120731 28.107 338 165 14 208 479 284 609 1.37e-18 89.7
Msa0690920 MtrunA17_Chr8g0377991 30.453 243 137 8 311 540 448 671 2.61e-18 89.0
Msa0690920 MtrunA17_Chr3g0124631 36.585 164 93 6 328 483 423 583 6.69e-18 87.4
Msa0690920 MtrunA17_Chr3g0121951 30.380 237 128 7 353 555 469 702 4.10e-16 81.6
Msa0690920 MtrunA17_Chr2g0334121 32.530 166 106 3 64 224 44 208 5.36e-16 77.0
Msa0690920 MtrunA17_Chr2g0329161 25.945 397 236 17 206 552 671 1059 1.86e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690920 AT4G19010.1 59.640 555 215 5 15 563 11 562 0.0 663
Msa0690920 AT1G20510.1 44.256 531 291 2 26 555 10 536 1.56e-163 477
Msa0690920 AT1G20480.1 42.077 549 297 7 26 563 27 565 2.95e-150 444
Msa0690920 AT1G20500.1 42.391 552 296 7 21 563 12 550 6.67e-149 439
Msa0690920 AT5G38120.1 41.133 547 293 9 21 555 13 542 1.84e-136 407
Msa0690920 AT4G05160.1 40.183 545 308 6 29 563 8 544 5.95e-135 404
Msa0690920 AT1G20510.2 42.918 466 261 2 26 490 10 471 8.06e-135 400
Msa0690920 AT5G63380.1 39.633 545 303 7 26 555 17 550 5.92e-134 402
Msa0690920 AT1G20510.3 41.964 448 251 4 26 470 10 451 2.35e-122 369
Msa0690920 AT5G38120.3 39.692 519 284 9 21 527 13 514 1.52e-120 365
Msa0690920 AT3G21240.1 39.437 568 315 12 11 563 1 554 4.59e-116 355
Msa0690920 AT5G38120.4 39.834 482 261 9 21 490 13 477 3.79e-110 338
Msa0690920 AT5G38120.2 39.834 482 261 9 21 490 13 477 3.79e-110 338
Msa0690920 AT1G51680.1 41.487 511 283 6 64 563 56 561 7.17e-110 340
Msa0690920 AT1G65060.1 39.299 542 309 10 21 556 30 557 1.95e-105 328
Msa0690920 AT3G21230.1 38.256 562 329 8 10 561 13 566 9.53e-105 327
Msa0690920 AT1G20490.2 39.394 429 240 8 21 440 12 429 1.30e-94 296
Msa0690920 AT1G20490.1 39.394 429 240 8 21 440 12 429 1.30e-94 296
Msa0690920 AT1G51680.3 40.421 475 267 6 64 527 56 525 7.40e-94 297
Msa0690920 AT1G62940.1 37.302 504 293 9 63 556 43 533 2.16e-93 296
Msa0690920 AT3G21230.3 37.454 542 317 9 10 541 13 542 4.02e-93 296
Msa0690920 AT3G21240.2 38.028 497 279 12 11 492 1 483 5.32e-89 283
Msa0690920 AT3G21240.3 38.028 497 279 12 11 492 1 483 5.32e-89 283
Msa0690920 AT1G51680.2 39.773 440 249 6 64 492 56 490 2.85e-83 268
Msa0690920 AT3G21230.2 37.120 493 292 8 10 492 13 497 4.52e-82 265
Msa0690920 AT1G65060.2 36.638 464 262 11 21 472 30 473 1.39e-72 240
Msa0690920 AT3G48990.1 28.866 485 331 9 73 553 30 504 9.73e-50 180
Msa0690920 AT1G77240.1 30.171 527 304 19 73 561 43 543 3.89e-46 170
Msa0690920 AT5G16370.1 29.323 532 321 18 61 557 28 539 4.89e-46 170
Msa0690920 AT3G21230.4 32.464 422 267 8 10 421 13 426 1.30e-45 167
Msa0690920 AT1G21540.1 27.848 553 338 19 47 561 19 548 2.07e-44 166
Msa0690920 AT1G21530.2 28.324 519 319 19 73 557 44 543 6.82e-43 161
Msa0690920 AT5G16340.1 29.236 537 313 18 61 556 28 538 9.67e-43 161
Msa0690920 AT1G65890.1 27.432 514 314 17 86 556 52 549 6.59e-42 159
Msa0690920 AT1G21530.1 28.240 517 320 19 73 557 44 541 1.15e-41 158
Msa0690920 AT1G65880.1 26.834 518 313 16 86 556 52 550 6.13e-40 154
Msa0690920 AT1G20560.1 28.108 555 345 17 35 556 6 539 6.36e-40 153
Msa0690920 AT1G75960.1 29.167 504 308 16 86 557 53 539 2.08e-38 149
Msa0690920 AT1G66120.1 28.373 504 315 15 86 556 52 542 6.22e-38 147
Msa0690920 AT1G30520.2 27.119 531 306 17 83 557 42 547 1.01e-35 141
Msa0690920 AT1G30520.1 27.119 531 306 17 83 557 42 547 1.01e-35 141
Msa0690920 AT1G20560.2 30.548 383 231 10 192 556 96 461 1.23e-34 137
Msa0690920 AT3G16910.1 29.847 392 234 10 189 556 181 555 3.21e-34 137
Msa0690920 AT2G17650.1 26.527 524 304 18 86 556 99 594 5.22e-34 137
Msa0690920 AT3G16170.1 27.577 388 237 12 205 562 234 607 2.00e-32 132
Msa0690920 AT1G76290.1 25.092 542 357 18 42 556 12 531 1.30e-29 123
Msa0690920 AT5G36880.6 25.094 530 353 15 72 563 146 669 2.24e-26 114
Msa0690920 AT5G36880.3 25.094 530 353 15 72 563 146 669 2.24e-26 114
Msa0690920 AT5G36880.5 25.094 530 353 15 72 563 146 669 2.24e-26 114
Msa0690920 AT5G36880.1 25.094 530 353 15 72 563 146 669 2.24e-26 114
Msa0690920 AT1G30520.3 26.622 447 258 16 83 487 42 460 2.39e-26 112
Msa0690920 AT1G30520.4 26.622 447 258 16 83 487 42 460 2.39e-26 112
Msa0690920 AT5G36880.2 25.094 530 353 15 72 563 196 719 2.75e-26 114
Msa0690920 AT5G27600.1 27.619 525 294 17 27 478 58 569 6.91e-26 112
Msa0690920 AT1G64400.1 25.144 521 307 16 32 478 27 538 8.12e-26 112
Msa0690920 AT1G68270.1 36.709 158 89 2 409 556 363 519 3.09e-24 107
Msa0690920 AT4G11030.1 23.722 489 298 15 57 478 58 538 3.14e-24 107
Msa0690920 AT3G05970.1 30.699 329 170 11 197 478 252 569 1.50e-22 102
Msa0690920 AT1G49430.1 26.004 523 304 21 41 490 39 551 3.32e-22 101
Msa0690920 AT1G77590.2 28.080 349 181 14 206 492 100 440 2.36e-21 98.2
Msa0690920 AT1G77590.1 28.080 349 181 14 206 492 246 586 3.91e-21 98.2
Msa0690920 AT4G23850.1 23.800 521 314 19 32 478 27 538 4.84e-21 97.8
Msa0690920 AT3G23790.1 32.919 161 93 4 353 501 474 631 5.96e-15 78.6
Msa0690920 AT4G14070.1 27.899 276 167 8 305 552 440 711 6.38e-11 65.9

Find 201 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTCTGCTTTACACAAAA+TGG 0.138296 4_4:+58836624 Msa0690920:CDS
GCTGGTATATTGTATTCTTC+TGG 0.174054 4_4:+58836988 Msa0690920:CDS
ACAGGATAGTAAATTGAATT+TGG 0.180607 4_4:-58836682 None:intergenic
CTCTTGGCTGTTCTGTATTT+AGG 0.185255 4_4:+58836709 Msa0690920:CDS
ATATGACCAATAATGAATTT+TGG 0.185466 4_4:+58835925 Msa0690920:five_prime_UTR
ACTTGTCGGTTGTGCCTTAA+AGG 0.192922 4_4:-58835676 None:intergenic
GCCCTTATTGATTATTCATC+TGG 0.202567 4_4:+58836556 Msa0690920:CDS
TAATCATAATGTTGGGGATT+TGG 0.219662 4_4:-58836148 None:intergenic
GGAGTTTGATTAAAAGAGTT+TGG 0.228239 4_4:-58835840 None:intergenic
TGTTGGGGATTTGGAATATT+TGG 0.231225 4_4:-58836139 None:intergenic
TATCAAATACAAGGGATTTC+AGG 0.243292 4_4:+58838880 Msa0690920:CDS
GTTGAGTGATCATGTTGTTT+TGG 0.245364 4_4:-58836402 None:intergenic
CGCCATGTATTGTCTTTCTT+TGG 0.245550 4_4:-58839582 None:intergenic
TTTCATGAATTATAGGATAT+TGG 0.247502 4_4:+58840310 Msa0690920:three_prime_UTR
TAATATCCAAAATTCATTAT+TGG 0.251066 4_4:-58835931 None:intergenic
TTGACATTGACGAGGTTATC+AGG 0.253484 4_4:+58837223 Msa0690920:CDS
GATTAAGTGCAATATATTAT+AGG 0.261460 4_4:+58835766 Msa0690920:five_prime_UTR
AGACAAAAGAATACAATTTC+AGG 0.266973 4_4:+58840511 Msa0690920:three_prime_UTR
ACGGCTGCATCGACTATTTC+AGG 0.272026 4_4:-58839052 None:intergenic
AAATTTCCAACCCTATTCTT+AGG 0.276628 4_4:+58836080 Msa0690920:five_prime_UTR
TAAAATATAACTCTTTCTTT+AGG 0.278247 4_4:+58835863 Msa0690920:five_prime_UTR
ACCCAGATGAATAATCAATA+AGG 0.281008 4_4:-58836558 None:intergenic
AGTGCCGAAGATGAAGAAAT+TGG 0.290280 4_4:+58839212 Msa0690920:intron
TCATAGAAATCTAATTTCTA+TGG 0.293867 4_4:+58837044 Msa0690920:CDS
TTTCACAACTATTCGTCAAT+AGG 0.295826 4_4:+58838058 Msa0690920:CDS
GGGTCAGTTGGAAGGTTTCT+AGG 0.297530 4_4:-58836481 None:intergenic
ATGAAGGCAAAGGGTGTTAA+TGG 0.303488 4_4:+58837309 Msa0690920:CDS
TGGAAATTTCTGTACGCATT+TGG 0.315063 4_4:-58836066 None:intergenic
AATATTTGGTGTGAAGAAAA+AGG 0.315910 4_4:-58836125 None:intergenic
TTAATACGTTAGTCTTCTTC+AGG 0.327390 4_4:+58840037 Msa0690920:three_prime_UTR
CAGGCAGCTGCGGTGAGCTT+TGG 0.328932 4_4:+58838143 Msa0690920:CDS
AATGTTAATATGTACCTTTA+AGG 0.329026 4_4:+58835662 Msa0690920:five_prime_UTR
CAAAGCTCACCGCAGCTGCC+TGG 0.332403 4_4:-58838142 None:intergenic
TTGCCAATGTTTCATGTGTA+TGG 0.342668 4_4:+58837138 Msa0690920:CDS
AGTCCACCAGTTTCATGTTA+TGG 0.343233 4_4:-58839610 None:intergenic
GGAACGTAATAGCTACGTTT+AGG 0.343445 4_4:-58836176 None:intergenic
AATGTGCAGAATAGAAATTT+TGG 0.344789 4_4:-58839709 None:intergenic
CATTTAACTCATTAACTTGT+CGG 0.346300 4_4:-58835690 None:intergenic
CTGGTATATTGTATTCTTCT+GGG 0.346881 4_4:+58836989 Msa0690920:CDS
GGTTATAAAGATTGAAGCTT+TGG 0.356356 4_4:-58836295 None:intergenic
AGCAGTGCCTGAGTTGCTTT+CGG 0.356544 4_4:-58839509 None:intergenic
AGTCATTGGTTTACAATACT+TGG 0.360941 4_4:+58840201 Msa0690920:three_prime_UTR
AAGGGTGAAATTGTCTTTGT+TGG 0.360994 4_4:-58836106 None:intergenic
GGGACTATAATCATAATGTT+GGG 0.361470 4_4:-58836155 None:intergenic
ACATCTGAATTATGAGTCAT+TGG 0.365621 4_4:+58840187 Msa0690920:three_prime_UTR
TTCCCCAATTTCTTCATCTT+CGG 0.365786 4_4:-58839216 None:intergenic
TTCTTACCTCTCATAATAGA+AGG 0.374837 4_4:-58838175 None:intergenic
TTCACAACTATTCGTCAATA+GGG 0.376437 4_4:+58838059 Msa0690920:CDS
CACTAATAACAGAATCATTC+AGG 0.378618 4_4:+58840098 Msa0690920:three_prime_UTR
ACCTGTATAAAATCAACGTT+AGG 0.379226 4_4:-58837417 None:intergenic
TGTTGGTGAAATTCGTAAAC+AGG 0.387052 4_4:+58836765 Msa0690920:CDS
TTCACTTGTAATCTTTGATA+AGG 0.390882 4_4:+58840001 Msa0690920:three_prime_UTR
AAAGCTCACCGCAGCTGCCT+GGG 0.391998 4_4:-58838141 None:intergenic
TTACTATCCTGTTATACTCT+TGG 0.392695 4_4:+58836693 Msa0690920:CDS
AGAACAGCCAAGAGTATAAC+AGG 0.393213 4_4:-58836700 None:intergenic
GAGTTTGATTAAAAGAGTTT+GGG 0.395162 4_4:-58835839 None:intergenic
GAACGTAATAGCTACGTTTA+GGG 0.395890 4_4:-58836175 None:intergenic
ACCATAAGTCTCATGTAGAT+TGG 0.396872 4_4:+58840434 Msa0690920:three_prime_UTR
GTGCCGAAGATGAAGAAATT+GGG 0.397388 4_4:+58839213 Msa0690920:intron
AGGGTGAAATTGTCTTTGTT+GGG 0.398587 4_4:-58836105 None:intergenic
CCCAATCTACATGAGACTTA+TGG 0.402140 4_4:-58840435 None:intergenic
ACCTTCCGGACCTTCTTGTA+TGG 0.403187 4_4:-58839441 None:intergenic
ATTAAACAAAACCAAGGAAA+AGG 0.409840 4_4:-58835985 None:intergenic
CCCTTATTGATTATTCATCT+GGG 0.409877 4_4:+58836557 Msa0690920:CDS
TGCTGCGGGATTATTGTCGT+TGG 0.410245 4_4:+58837173 Msa0690920:CDS
TGTTGTTCCACCGATGTTGT+CGG 0.411176 4_4:+58837278 Msa0690920:CDS
AAGGAAACAATGTCAAGAAA+AGG 0.413052 4_4:-58836502 None:intergenic
TGCTTGAGTTCTAAACTCTA+AGG 0.416696 4_4:+58839528 Msa0690920:CDS
TCAGGATGGATATTTACATT+TGG 0.418131 4_4:+58838838 Msa0690920:CDS
TTTGTTGGGATCCTAAGAAT+AGG 0.418373 4_4:-58836091 None:intergenic
GTCAAGAAACTAGAGCTATT+AGG 0.418468 4_4:+58836832 Msa0690920:CDS
TCAAAGGGTAGTTATTAAAC+AGG 0.419883 4_4:+58836957 Msa0690920:CDS
CTATTCGTCAATAGGGTTGT+TGG 0.424322 4_4:+58838066 Msa0690920:CDS
GACAACATCGGTGGAACAAC+AGG 0.427365 4_4:-58837276 None:intergenic
TTGTTGGGATCCTAAGAATA+GGG 0.428757 4_4:-58836090 None:intergenic
TACGCATTTGGCTCTCAAGT+TGG 0.428976 4_4:-58836054 None:intergenic
TGTTTAATAACTACCCTTTG+AGG 0.430394 4_4:-58836955 None:intergenic
GGTTTATCGCTCTTTGCTGC+GGG 0.430597 4_4:+58837159 Msa0690920:CDS
ACGCATTTGGCTCTCAAGTT+GGG 0.434343 4_4:-58836053 None:intergenic
TAACAACTTTGAGTAAGAAA+TGG 0.436153 4_4:-58836584 None:intergenic
TTTGTTGAAAGTGATGGATT+CGG 0.436910 4_4:-58840270 None:intergenic
AGGGACTATAATCATAATGT+TGG 0.443278 4_4:-58836156 None:intergenic
CAGAAAATGAGAAGGATTTG+AGG 0.445513 4_4:+58836881 Msa0690920:CDS
CTCAACACCCTCACCCTCAT+TGG 0.448612 4_4:+58836419 Msa0690920:CDS
CCCAGATGAATAATCAATAA+GGG 0.452763 4_4:-58836557 None:intergenic
TGCGGTGAGCTTTGGTTGAG+AGG 0.454034 4_4:+58838151 Msa0690920:CDS
GCTTCTGCTTTACACAAAAT+GGG 0.455667 4_4:+58836625 Msa0690920:CDS
GGGTTACCATAACATGAAAC+TGG 0.457748 4_4:+58839604 Msa0690920:three_prime_UTR
GCTGCGGGATTATTGTCGTT+GGG 0.458574 4_4:+58837174 Msa0690920:CDS
TTGTATTCTTCTGGGACTAC+AGG 0.459563 4_4:+58836997 Msa0690920:CDS
CCATAAGTCTCATGTAGATT+GGG 0.460455 4_4:+58840435 Msa0690920:three_prime_UTR
AATCAAATTTACCATAAAGA+AGG 0.470429 4_4:-58836930 None:intergenic
ATAACTGACTAAAGGTGTAC+AGG 0.470744 4_4:-58839810 None:intergenic
ATTGAAAAGTATGACACAAC+AGG 0.473687 4_4:-58839944 None:intergenic
TAAATTTGATTTGCCTCAAA+GGG 0.485047 4_4:+58836942 Msa0690920:CDS
GGTGCAGCGCCTTTGAGCAT+AGG 0.486009 4_4:+58837366 Msa0690920:CDS
GTAAATTTGATTTGCCTCAA+AGG 0.487083 4_4:+58836941 Msa0690920:CDS
AACAGCTAGAAACACACTCT+TGG 0.487245 4_4:-58837115 None:intergenic
GCATTTGTTGTCAAGAAGGT+TGG 0.487321 4_4:+58839248 Msa0690920:CDS
ACATAATCGACCACATGCTT+CGG 0.487322 4_4:-58839284 None:intergenic
ATTTCACCAACACTACTAAG+AGG 0.489624 4_4:-58836754 None:intergenic
CGGAGACCTTGGTATCTTGT+CGG 0.489928 4_4:-58839472 None:intergenic
AGTGGCATTTGTTGTCAAGA+AGG 0.496940 4_4:+58839244 Msa0690920:CDS
GTACAGGGCAGAGTAATTGA+TGG 0.498066 4_4:-58839794 None:intergenic
TTGAGCATAGGAGTTATTAG+TGG 0.499006 4_4:+58837378 Msa0690920:CDS
AACACAGCTTCTAGATCAGC+AGG 0.500308 4_4:-58839019 None:intergenic
CACAAAATGGGTGTTTCACA+AGG 0.502968 4_4:+58836637 Msa0690920:CDS
TTGAATCCTCTTAGTAGTGT+TGG 0.505325 4_4:+58836748 Msa0690920:CDS
TTAAACAAAACCAAGGAAAA+GGG 0.505625 4_4:-58835984 None:intergenic
ATCTTCCCAGTCGGAGACCT+TGG 0.507080 4_4:-58839483 None:intergenic
TGGTTTATCGCTCTTTGCTG+CGG 0.507976 4_4:+58837158 Msa0690920:CDS
ATTTCTCTAGTGCATTTACA+AGG 0.509552 4_4:-58839843 None:intergenic
TGTCGGTGAAGAACACCTTC+CGG 0.510625 4_4:-58839455 None:intergenic
TTCTTGACAACAAATGCCAC+TGG 0.510888 4_4:-58839242 None:intergenic
TAAGTTGCAGAGTTTGAGAC+AGG 0.511530 4_4:+58837335 Msa0690920:CDS
TTGCTCCATACAAGAAGGTC+CGG 0.515213 4_4:+58839436 Msa0690920:CDS
CGGAGGCAAAAGTGGTAGAC+TGG 0.515561 4_4:+58838098 Msa0690920:CDS
AAAGATGGTTGGCTACATAC+AGG 0.515947 4_4:+58838797 Msa0690920:CDS
GCGGTGAGCTTTGGTTGAGA+GGG 0.517348 4_4:+58838152 Msa0690920:CDS
AGGAAACAATGTCAAGAAAA+GGG 0.521407 4_4:-58836501 None:intergenic
TTTGTCTTTATCATGTGTGC+GGG 0.521901 4_4:+58836010 Msa0690920:five_prime_UTR
AAGCTCACCGCAGCTGCCTG+GGG 0.523366 4_4:-58838140 None:intergenic
TGGGATCCTAAGAATAGGGT+TGG 0.527873 4_4:-58836086 None:intergenic
ATGTCAAGAAAAGGGTCAGT+TGG 0.533509 4_4:-58836493 None:intergenic
AAACCATACACATGAAACAT+TGG 0.533547 4_4:-58837141 None:intergenic
TCCAAACACGGAGGCAAAAG+TGG 0.534472 4_4:+58838090 Msa0690920:CDS
GAAGCCATGGATTTGACTAA+AGG 0.537715 4_4:-58836607 None:intergenic
ATATCAACAATTGATAAAGA+TGG 0.537763 4_4:+58838782 Msa0690920:CDS
ATCATCAATAACTGATCAAG+TGG 0.539714 4_4:+58835529 Msa0690920:five_prime_UTR
GTTACCTTTAGTCAAATCCA+TGG 0.539728 4_4:+58836603 Msa0690920:CDS
AGATCCTCCGAAAGCAACTC+AGG 0.540928 4_4:+58839502 Msa0690920:CDS
AAAGTGGTAGACTGGAACAA+TGG 0.541163 4_4:+58838106 Msa0690920:CDS
CTCAGGATACTTGAATAATG+AGG 0.541417 4_4:+58838751 Msa0690920:intron
CACATCTCATTATGTTTGAG+AGG 0.543063 4_4:+58840353 Msa0690920:three_prime_UTR
TTCATATACTTACGCTGTAA+CGG 0.543086 4_4:-58839071 None:intergenic
CTACATGAGACTTATGGTAA+TGG 0.544122 4_4:-58840429 None:intergenic
CAAGAAAAGGGTCAGTTGGA+AGG 0.544290 4_4:-58836489 None:intergenic
AACGAATTTCAAGAAAGTCA+TGG 0.548135 4_4:+58835596 Msa0690920:five_prime_UTR
CTCTTACTATAACTGACTAA+AGG 0.548149 4_4:-58839818 None:intergenic
AATCAACGTTAGGGAAAGCA+TGG 0.550452 4_4:-58837407 None:intergenic
GAAAGACATTATCAAATACA+AGG 0.550958 4_4:+58838871 Msa0690920:CDS
GGTCGATTATGTTGCTGAGC+AGG 0.550976 4_4:+58839295 Msa0690920:CDS
GTGGAAATGGGGATATGAAA+GGG 0.551077 4_4:-58836197 None:intergenic
GGGACTACAGGTGTGAGTAA+AGG 0.553349 4_4:+58837009 Msa0690920:CDS
TTATAGGATATTGGATCAGA+GGG 0.554300 4_4:+58840319 Msa0690920:three_prime_UTR
TTTGTGTAAAGCAGAAGCCA+TGG 0.560434 4_4:-58836620 None:intergenic
CCTGTATAAAATCAACGTTA+GGG 0.562718 4_4:-58837416 None:intergenic
CTTGAAACAATCAATTCTGA+GGG 0.563240 4_4:+58840159 Msa0690920:three_prime_UTR
TGACATTGACGAGGTTATCA+GGG 0.564262 4_4:+58837224 Msa0690920:CDS
ACACTACTAAGAGGATTCAA+TGG 0.565007 4_4:-58836745 None:intergenic
TACCAAAGAAAGACAATACA+TGG 0.567298 4_4:+58839580 Msa0690920:three_prime_UTR
ACTTGAAACAATCAATTCTG+AGG 0.568297 4_4:+58840158 Msa0690920:three_prime_UTR
CAACAATTGATAAAGATGGT+TGG 0.569594 4_4:+58838786 Msa0690920:CDS
GTGGTGTGAAGTGTTGAATG+TGG 0.569778 4_4:-58836316 None:intergenic
GGCATTGACAATGAAGGCAA+AGG 0.569984 4_4:+58837299 Msa0690920:CDS
GCATTGACAATGAAGGCAAA+GGG 0.570042 4_4:+58837300 Msa0690920:CDS
ATTTGATAATGTCTTTCAAG+CGG 0.579224 4_4:-58838865 None:intergenic
ATTATAGGATATTGGATCAG+AGG 0.579489 4_4:+58840318 Msa0690920:three_prime_UTR
ATTGTCAATGCCGACAACAT+CGG 0.579863 4_4:-58837288 None:intergenic
GGACTATAATCATAATGTTG+GGG 0.580599 4_4:-58836154 None:intergenic
TGTGGAAATGGGGATATGAA+AGG 0.582479 4_4:-58836198 None:intergenic
GTTCAAATTAGCAAAGGTGC+AGG 0.584639 4_4:+58840247 Msa0690920:three_prime_UTR
AAAGAAAGACAATACATGGC+GGG 0.585051 4_4:+58839584 Msa0690920:three_prime_UTR
TGCTGTGCCAGAAAATGAGA+AGG 0.586565 4_4:+58836873 Msa0690920:CDS
AGGCTGTGGCTTGAGTGTGA+AGG 0.586939 4_4:-58836230 None:intergenic
AGTTTGAGACAGGTCTCTTG+CGG 0.592614 4_4:+58837345 Msa0690920:CDS
GATGAATACCAATGAGGGTG+AGG 0.592922 4_4:-58836427 None:intergenic
GTTGTCGGCATTGACAATGA+AGG 0.595731 4_4:+58837293 Msa0690920:CDS
AATACTTGGAAAATTTCTGT+CGG 0.596557 4_4:+58840215 Msa0690920:three_prime_UTR
GATCTACTGTCATTGTAATG+AGG 0.600626 4_4:+58837196 Msa0690920:CDS
TGCCGAAGATGAAGAAATTG+GGG 0.602629 4_4:+58839214 Msa0690920:CDS
AAGATACCAAGGTCTCCGAC+TGG 0.604082 4_4:+58839477 Msa0690920:CDS
CTAATAACTCCTATGCTCAA+AGG 0.604731 4_4:-58837375 None:intergenic
ATTAAACAGGAAGATACTGC+TGG 0.608838 4_4:+58836970 Msa0690920:CDS
CGTAAACAGGTTCAAGAGTG+TGG 0.611754 4_4:+58836778 Msa0690920:CDS
AGGGTTGTTGGCTCCAAACA+CGG 0.614077 4_4:+58838078 Msa0690920:CDS
AAAGACATTATCAAATACAA+GGG 0.615550 4_4:+58838872 Msa0690920:CDS
GTCAATGCCGACAACATCGG+TGG 0.615987 4_4:-58837285 None:intergenic
TTTCGGAGGATCTTCCCAGT+CGG 0.617027 4_4:-58839492 None:intergenic
AGAGGGCCTTCTATTATGAG+AGG 0.618979 4_4:+58838169 Msa0690920:CDS
AGATACCAAGGTCTCCGACT+GGG 0.620788 4_4:+58839478 Msa0690920:CDS
GCAGGTTGCTCCATACAAGA+AGG 0.622353 4_4:+58839431 Msa0690920:intron
TCGACTGCAGTGGGAACACG+TGG 0.624008 4_4:+58838019 Msa0690920:CDS
AACTGCGTTCAAATTAGCAA+AGG 0.630302 4_4:+58840241 Msa0690920:three_prime_UTR
TAACTGACTAAAGGTGTACA+GGG 0.630429 4_4:-58839809 None:intergenic
TTACCATAACATGAAACTGG+TGG 0.637363 4_4:+58839607 Msa0690920:three_prime_UTR
AGCTCACCGCAGCTGCCTGG+GGG 0.641341 4_4:-58838139 None:intergenic
AGGGCTAAAACCCCATCATG+AGG 0.644178 4_4:-58836538 None:intergenic
AGTGCCTGAGTTGCTTTCGG+AGG 0.646420 4_4:-58839506 None:intergenic
ATGACTGAGTCGACTGCAGT+GGG 0.649133 4_4:+58838010 Msa0690920:CDS
GCAGTGTAATAAACAGAACA+AGG 0.654584 4_4:+58840126 Msa0690920:three_prime_UTR
TCCATACAAGAAGGTCCGGA+AGG 0.659172 4_4:+58839440 Msa0690920:CDS
TGTACTTTCTCCGAAGCATG+TGG 0.668913 4_4:+58839274 Msa0690920:CDS
AATGACTGAGTCGACTGCAG+TGG 0.680151 4_4:+58838009 Msa0690920:CDS
AAGAAACTAGAGCTATTAGG+TGG 0.680245 4_4:+58836835 Msa0690920:CDS
GAGGAAATTTGACATTGACG+AGG 0.683873 4_4:+58837215 Msa0690920:CDS
ATGAATACCAATGAGGGTGA+GGG 0.691317 4_4:-58836426 None:intergenic
AGAAATTGGGGAAATTCCAG+TGG 0.696561 4_4:+58839226 Msa0690920:CDS
TCTTCACCGACAAGATACCA+AGG 0.749835 4_4:+58839466 Msa0690920:CDS
CAAAGAAAGACAATACATGG+CGG 0.750110 4_4:+58839583 Msa0690920:three_prime_UTR
GTTGTTGGCTCCAAACACGG+AGG 0.795141 4_4:+58838081 Msa0690920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAGAAAAAAAATAAAATAA+AGG - chr4_4:58839409-58839428 None:intergenic 10.0%
!!! TTATTTTATTTTTTTTCTTC+TGG + chr4_4:58839409-58839428 Msa0690920:intron 10.0%
!! TAAAAATTAAATTCAATGCA+CGG - chr4_4:58835736-58835755 None:intergenic 15.0%
!!! TAAAGAAAGAGTTATATTTT+AGG - chr4_4:58835864-58835883 None:intergenic 15.0%
!! TAAAATATAACTCTTTCTTT+AGG + chr4_4:58835863-58835882 Msa0690920:five_prime_UTR 15.0%
!!! ATATTTTTGTGTGTAAAAAA+AGG - chr4_4:58835909-58835928 None:intergenic 15.0%
!! TAATATCCAAAATTCATTAT+TGG - chr4_4:58835934-58835953 None:intergenic 15.0%
!! AAATAGTGAAATAGAAAAAA+GGG - chr4_4:58836270-58836289 None:intergenic 15.0%
!! AAAATAGTGAAATAGAAAAA+AGG - chr4_4:58836271-58836290 None:intergenic 15.0%
!!! TTATTTTTCTTTGTTATTGT+TGG + chr4_4:58837522-58837541 Msa0690920:intron 15.0%
!!! TTATTAACATTTTACTGATA+AGG - chr4_4:58838512-58838531 None:intergenic 15.0%
!!! GTTTGATTAACAATTTTAAT+TGG - chr4_4:58838717-58838736 None:intergenic 15.0%
!!! GTAATATTTTCATGAATTAT+AGG + chr4_4:58840303-58840322 Msa0690920:three_prime_UTR 15.0%
!! AACAATAACTAAAAACTCTT+TGG + chr4_4:58835637-58835656 Msa0690920:five_prime_UTR 20.0%
!! ACAATAACTAAAAACTCTTT+GGG + chr4_4:58835638-58835657 Msa0690920:five_prime_UTR 20.0%
!! AATGTTAATATGTACCTTTA+AGG + chr4_4:58835662-58835681 Msa0690920:five_prime_UTR 20.0%
!! GATTAAGTGCAATATATTAT+AGG + chr4_4:58835766-58835785 Msa0690920:five_prime_UTR 20.0%
!!! ATATGACCAATAATGAATTT+TGG + chr4_4:58835925-58835944 Msa0690920:five_prime_UTR 20.0%
!! CAAAAAATTAAACAAAACCA+AGG - chr4_4:58835994-58836013 None:intergenic 20.0%
!!! AGTTTTTTTAACCTTCTTTA+TGG + chr4_4:58836919-58836938 Msa0690920:CDS 20.0%
!! AATCAAATTTACCATAAAGA+AGG - chr4_4:58836933-58836952 None:intergenic 20.0%
!! TCATAGAAATCTAATTTCTA+TGG + chr4_4:58837044-58837063 Msa0690920:CDS 20.0%
!! TTTAATAGCAACTGTTATAT+AGG + chr4_4:58837603-58837622 Msa0690920:intron 20.0%
!! TTAATAGCAACTGTTATATA+GGG + chr4_4:58837604-58837623 Msa0690920:intron 20.0%
!!! CAAATAAAGTTCAACTTTTA+TGG - chr4_4:58837921-58837940 None:intergenic 20.0%
!! AGATATTAAAAAGTGAAACA+CGG + chr4_4:58838216-58838235 Msa0690920:intron 20.0%
!! TATAGAGCAAATATAGTAAA+GGG - chr4_4:58838339-58838358 None:intergenic 20.0%
!! ATATAGAGCAAATATAGTAA+AGG - chr4_4:58838340-58838359 None:intergenic 20.0%
!! ATATCAACAATTGATAAAGA+TGG + chr4_4:58838782-58838801 Msa0690920:CDS 20.0%
!!! AGATATTGTTTATTTTGATC+AGG + chr4_4:58838820-58838839 Msa0690920:CDS 20.0%
!! AAAGACATTATCAAATACAA+GGG + chr4_4:58838872-58838891 Msa0690920:CDS 20.0%
!!! ATCATTTGTTTTGATTACTT+GGG - chr4_4:58840074-58840093 None:intergenic 20.0%
!!! TATCATTTGTTTTGATTACT+TGG - chr4_4:58840075-58840094 None:intergenic 20.0%
!! TTTCATGAATTATAGGATAT+TGG + chr4_4:58840310-58840329 Msa0690920:three_prime_UTR 20.0%
!! CTAAATACCTCTAAAAAAAG+TGG + chr4_4:58835557-58835576 Msa0690920:five_prime_UTR 25.0%
!!! CATTTAACTCATTAACTTGT+CGG - chr4_4:58835693-58835712 None:intergenic 25.0%
! GAGTTTGATTAAAAGAGTTT+GGG - chr4_4:58835842-58835861 None:intergenic 25.0%
! TTTGTGTGTAAAAAAAGGTT+TGG - chr4_4:58835904-58835923 None:intergenic 25.0%
! TTAAACAAAACCAAGGAAAA+GGG - chr4_4:58835987-58836006 None:intergenic 25.0%
! ATTAAACAAAACCAAGGAAA+AGG - chr4_4:58835988-58836007 None:intergenic 25.0%
!!! ATATTTGGTGTGAAGAAAAA+GGG - chr4_4:58836127-58836146 None:intergenic 25.0%
!!! AATATTTGGTGTGAAGAAAA+AGG - chr4_4:58836128-58836147 None:intergenic 25.0%
!! GATTTTCAGAAAAAAGAGAA+CGG - chr4_4:58836346-58836365 None:intergenic 25.0%
!!! CTCTTTTTTCTGAAAATCAA+TGG + chr4_4:58836348-58836367 Msa0690920:exon 25.0%
!! TTTTTGATGAATACCAATGA+GGG - chr4_4:58836435-58836454 None:intergenic 25.0%
! TAACAACTTTGAGTAAGAAA+TGG - chr4_4:58836587-58836606 None:intergenic 25.0%
! ACAGGATAGTAAATTGAATT+TGG - chr4_4:58836685-58836704 None:intergenic 25.0%
!!! TAAATTTGATTTGCCTCAAA+GGG + chr4_4:58836942-58836961 Msa0690920:CDS 25.0%
! ATTAAGGCTATTCTATTCAA+AGG - chr4_4:58837449-58837468 None:intergenic 25.0%
! TTACTTGCATTCTCTAATTA+AGG - chr4_4:58837465-58837484 None:intergenic 25.0%
! AATAAATTGTTTAGCCAAAC+AGG - chr4_4:58837630-58837649 None:intergenic 25.0%
! AAATAAGCTGAAAAGAACTA+AGG + chr4_4:58837780-58837799 Msa0690920:intron 25.0%
!! TGTAAGATTGTTTCCTTTTA+GGG + chr4_4:58837980-58837999 Msa0690920:intron 25.0%
! ATATAAAGGTCTTGATTCAA+TGG + chr4_4:58838244-58838263 Msa0690920:intron 25.0%
! ATAGAGCAAATATAGTAAAG+GGG - chr4_4:58838338-58838357 None:intergenic 25.0%
!! ATTTGTTAACGCTTAACTAA+AGG + chr4_4:58838358-58838377 Msa0690920:intron 25.0%
! AACTAACATGATATTTCTCA+AGG - chr4_4:58838391-58838410 None:intergenic 25.0%
! AAACTGAAGTAAATTTCTCT+TGG + chr4_4:58838599-58838618 Msa0690920:intron 25.0%
!!! ATTGTTTATTTTGATCAGGA+TGG + chr4_4:58838824-58838843 Msa0690920:CDS 25.0%
!!! ATTTGATAATGTCTTTCAAG+CGG - chr4_4:58838868-58838887 None:intergenic 25.0%
! GAAAGACATTATCAAATACA+AGG + chr4_4:58838871-58838890 Msa0690920:CDS 25.0%
! TTATAATCAAATGTCCAAAG+AGG - chr4_4:58839163-58839182 None:intergenic 25.0%
!!! TTTATTTTTTTTCTTCTGGC+AGG + chr4_4:58839413-58839432 Msa0690920:intron 25.0%
!! TCATGAGTACATCTTTTTAA+AGG + chr4_4:58839654-58839673 Msa0690920:three_prime_UTR 25.0%
!! AATGTGCAGAATAGAAATTT+TGG - chr4_4:58839712-58839731 None:intergenic 25.0%
! AATACTTGGAAAATTTCTGT+CGG + chr4_4:58840215-58840234 Msa0690920:three_prime_UTR 25.0%
! ACTTTCAACAAAAAGACATT+TGG + chr4_4:58840281-58840300 Msa0690920:three_prime_UTR 25.0%
!!! TAACATGATTTTAGCTAAGA+AGG + chr4_4:58840393-58840412 Msa0690920:three_prime_UTR 25.0%
!! AATTGTATTCTTTTGTCTTC+TGG - chr4_4:58840509-58840528 None:intergenic 25.0%
ATCATCAATAACTGATCAAG+TGG + chr4_4:58835529-58835548 Msa0690920:five_prime_UTR 30.0%
!!! AGACTAACCACTTTTTTTAG+AGG - chr4_4:58835567-58835586 None:intergenic 30.0%
AACGAATTTCAAGAAAGTCA+TGG + chr4_4:58835596-58835615 Msa0690920:five_prime_UTR 30.0%
GGAGTTTGATTAAAAGAGTT+TGG - chr4_4:58835843-58835862 None:intergenic 30.0%
! ATATTTTATGCCCTTTTCCT+TGG + chr4_4:58835974-58835993 Msa0690920:five_prime_UTR 30.0%
! TTTTGTCTTTATCATGTGTG+CGG + chr4_4:58836009-58836028 Msa0690920:five_prime_UTR 30.0%
AAATTTCCAACCCTATTCTT+AGG + chr4_4:58836080-58836099 Msa0690920:five_prime_UTR 30.0%
TAATCATAATGTTGGGGATT+TGG - chr4_4:58836151-58836170 None:intergenic 30.0%
GGACTATAATCATAATGTTG+GGG - chr4_4:58836157-58836176 None:intergenic 30.0%
GGGACTATAATCATAATGTT+GGG - chr4_4:58836158-58836177 None:intergenic 30.0%
AGGGACTATAATCATAATGT+TGG - chr4_4:58836159-58836178 None:intergenic 30.0%
GGTTATAAAGATTGAAGCTT+TGG - chr4_4:58836298-58836317 None:intergenic 30.0%
!!! TTGAGTGATCATGTTGTTTT+GGG - chr4_4:58836404-58836423 None:intergenic 30.0%
! GTTTTTGATGAATACCAATG+AGG - chr4_4:58836436-58836455 None:intergenic 30.0%
CATTGGTATTCATCAAAAAC+TGG + chr4_4:58836436-58836455 Msa0690920:CDS 30.0%
AGGAAACAATGTCAAGAAAA+GGG - chr4_4:58836504-58836523 None:intergenic 30.0%
AAGGAAACAATGTCAAGAAA+AGG - chr4_4:58836505-58836524 None:intergenic 30.0%
ATGAGGATGTGAAAAAATGA+AGG - chr4_4:58836524-58836543 None:intergenic 30.0%
!!! ATTTTTTCACATCCTCATGA+TGG + chr4_4:58836526-58836545 Msa0690920:CDS 30.0%
!!! TTTTTTCACATCCTCATGAT+GGG + chr4_4:58836527-58836546 Msa0690920:CDS 30.0%
CCCAGATGAATAATCAATAA+GGG - chr4_4:58836560-58836579 None:intergenic 30.0%
! CCCTTATTGATTATTCATCT+GGG + chr4_4:58836557-58836576 Msa0690920:CDS 30.0%
ACCCAGATGAATAATCAATA+AGG - chr4_4:58836561-58836580 None:intergenic 30.0%
TTACTATCCTGTTATACTCT+TGG + chr4_4:58836693-58836712 Msa0690920:CDS 30.0%
!! TCTAGTTTCTTGACATTTTC+AGG - chr4_4:58836826-58836845 None:intergenic 30.0%
!! GTAAATTTGATTTGCCTCAA+AGG + chr4_4:58836941-58836960 Msa0690920:CDS 30.0%
TGTTTAATAACTACCCTTTG+AGG - chr4_4:58836958-58836977 None:intergenic 30.0%
TCAAAGGGTAGTTATTAAAC+AGG + chr4_4:58836957-58836976 Msa0690920:CDS 30.0%
CTGGTATATTGTATTCTTCT+GGG + chr4_4:58836989-58837008 Msa0690920:CDS 30.0%
AAACCATACACATGAAACAT+TGG - chr4_4:58837144-58837163 None:intergenic 30.0%
CCTGTATAAAATCAACGTTA+GGG - chr4_4:58837419-58837438 None:intergenic 30.0%
ACCTGTATAAAATCAACGTT+AGG - chr4_4:58837420-58837439 None:intergenic 30.0%
TCAAGCAATCATATAAACGA+TGG - chr4_4:58837492-58837511 None:intergenic 30.0%
! CTGTAAGATTGTTTCCTTTT+AGG + chr4_4:58837979-58837998 Msa0690920:intron 30.0%
!!! ATTGTTTCCTTTTAGGGTTA+TGG + chr4_4:58837986-58838005 Msa0690920:intron 30.0%
TTTCACAACTATTCGTCAAT+AGG + chr4_4:58838058-58838077 Msa0690920:CDS 30.0%
TTCACAACTATTCGTCAATA+GGG + chr4_4:58838059-58838078 Msa0690920:CDS 30.0%
TTCTTACCTCTCATAATAGA+AGG - chr4_4:58838178-58838197 None:intergenic 30.0%
GAAACACGGTAGTAATATAA+AGG + chr4_4:58838230-58838249 Msa0690920:intron 30.0%
AACTCTTTCCTTTAATTCTC+AGG + chr4_4:58838734-58838753 Msa0690920:intron 30.0%
TCAAGTATCCTGAGAATTAA+AGG - chr4_4:58838745-58838764 None:intergenic 30.0%
CAACAATTGATAAAGATGGT+TGG + chr4_4:58838786-58838805 Msa0690920:CDS 30.0%
TCAGGATGGATATTTACATT+TGG + chr4_4:58838838-58838857 Msa0690920:CDS 30.0%
TATCAAATACAAGGGATTTC+AGG + chr4_4:58838880-58838899 Msa0690920:CDS 30.0%
TTCATATACTTACGCTGTAA+CGG - chr4_4:58839074-58839093 None:intergenic 30.0%
GAAAAATGACGTAACATTTG+AGG - chr4_4:58839186-58839205 None:intergenic 30.0%
TACCAAAGAAAGACAATACA+TGG + chr4_4:58839580-58839599 Msa0690920:three_prime_UTR 30.0%
TAGAAAGTTCAAAAACCAGA+AGG + chr4_4:58839763-58839782 Msa0690920:three_prime_UTR 30.0%
!!! TTGATGGTTTTTTTTCCTTC+TGG - chr4_4:58839781-58839800 None:intergenic 30.0%
CTCTTACTATAACTGACTAA+AGG - chr4_4:58839821-58839840 None:intergenic 30.0%
ATTTCTCTAGTGCATTTACA+AGG - chr4_4:58839846-58839865 None:intergenic 30.0%
! ATTGAAAAGTATGACACAAC+AGG - chr4_4:58839947-58839966 None:intergenic 30.0%
! TGTCATACTTTTCAATTCAG+CGG + chr4_4:58839951-58839970 Msa0690920:three_prime_UTR 30.0%
! AATTCAGCGGTTAAGATTTT+TGG + chr4_4:58839964-58839983 Msa0690920:three_prime_UTR 30.0%
!! TTAATACGTTAGTCTTCTTC+AGG + chr4_4:58840037-58840056 Msa0690920:three_prime_UTR 30.0%
CACTAATAACAGAATCATTC+AGG + chr4_4:58840098-58840117 Msa0690920:three_prime_UTR 30.0%
ACTTGAAACAATCAATTCTG+AGG + chr4_4:58840158-58840177 Msa0690920:three_prime_UTR 30.0%
CTTGAAACAATCAATTCTGA+GGG + chr4_4:58840159-58840178 Msa0690920:three_prime_UTR 30.0%
ACATCTGAATTATGAGTCAT+TGG + chr4_4:58840187-58840206 Msa0690920:three_prime_UTR 30.0%
!! AGTCATTGGTTTACAATACT+TGG + chr4_4:58840201-58840220 Msa0690920:three_prime_UTR 30.0%
!! TTTGTTGAAAGTGATGGATT+CGG - chr4_4:58840273-58840292 None:intergenic 30.0%
! TGTCTTTTTGTTGAAAGTGA+TGG - chr4_4:58840279-58840298 None:intergenic 30.0%
ATTATAGGATATTGGATCAG+AGG + chr4_4:58840318-58840337 Msa0690920:three_prime_UTR 30.0%
TTATAGGATATTGGATCAGA+GGG + chr4_4:58840319-58840338 Msa0690920:three_prime_UTR 30.0%
TTTGTCTTTATCATGTGTGC+GGG + chr4_4:58836010-58836029 Msa0690920:five_prime_UTR 35.0%
TGGAAATTTCTGTACGCATT+TGG - chr4_4:58836069-58836088 None:intergenic 35.0%
TTGTTGGGATCCTAAGAATA+GGG - chr4_4:58836093-58836112 None:intergenic 35.0%
TTTGTTGGGATCCTAAGAAT+AGG - chr4_4:58836094-58836113 None:intergenic 35.0%
AGGGTGAAATTGTCTTTGTT+GGG - chr4_4:58836108-58836127 None:intergenic 35.0%
AAGGGTGAAATTGTCTTTGT+TGG - chr4_4:58836109-58836128 None:intergenic 35.0%
! TGTTGGGGATTTGGAATATT+TGG - chr4_4:58836142-58836161 None:intergenic 35.0%
GAACGTAATAGCTACGTTTA+GGG - chr4_4:58836178-58836197 None:intergenic 35.0%
! GTTTTGTGTTTGTGGAAATG+GGG - chr4_4:58836211-58836230 None:intergenic 35.0%
!! GGTTTTGTGTTTGTGGAAAT+GGG - chr4_4:58836212-58836231 None:intergenic 35.0%
!! AGGTTTTGTGTTTGTGGAAA+TGG - chr4_4:58836213-58836232 None:intergenic 35.0%
!!! AAAGGGTGTTGTGTTTTTTG+AGG - chr4_4:58836253-58836272 None:intergenic 35.0%
! GAAAAAAGAGAACGGTTTTG+TGG - chr4_4:58836338-58836357 None:intergenic 35.0%
!! GTTGAGTGATCATGTTGTTT+TGG - chr4_4:58836405-58836424 None:intergenic 35.0%
! TTTTTCACATCCTCATGATG+GGG + chr4_4:58836528-58836547 Msa0690920:CDS 35.0%
! GCCCTTATTGATTATTCATC+TGG + chr4_4:58836556-58836575 Msa0690920:CDS 35.0%
GTTACCTTTAGTCAAATCCA+TGG + chr4_4:58836603-58836622 Msa0690920:CDS 35.0%
GCTTCTGCTTTACACAAAAT+GGG + chr4_4:58836625-58836644 Msa0690920:CDS 35.0%
ACACTACTAAGAGGATTCAA+TGG - chr4_4:58836748-58836767 None:intergenic 35.0%
TTGAATCCTCTTAGTAGTGT+TGG + chr4_4:58836748-58836767 Msa0690920:CDS 35.0%
ATTTCACCAACACTACTAAG+AGG - chr4_4:58836757-58836776 None:intergenic 35.0%
! TGTTGGTGAAATTCGTAAAC+AGG + chr4_4:58836765-58836784 Msa0690920:CDS 35.0%
GTCAAGAAACTAGAGCTATT+AGG + chr4_4:58836832-58836851 Msa0690920:CDS 35.0%
AAGAAACTAGAGCTATTAGG+TGG + chr4_4:58836835-58836854 Msa0690920:CDS 35.0%
!! TTTTCTGGCACAGCAATAAT+GGG - chr4_4:58836868-58836887 None:intergenic 35.0%
!! ATTTTCTGGCACAGCAATAA+TGG - chr4_4:58836869-58836888 None:intergenic 35.0%
! CTCAAATCCTTCTCATTTTC+TGG - chr4_4:58836883-58836902 None:intergenic 35.0%
CAGAAAATGAGAAGGATTTG+AGG + chr4_4:58836881-58836900 Msa0690920:CDS 35.0%
ATTAAACAGGAAGATACTGC+TGG + chr4_4:58836970-58836989 Msa0690920:CDS 35.0%
GCTGGTATATTGTATTCTTC+TGG + chr4_4:58836988-58837007 Msa0690920:CDS 35.0%
TTGCCAATGTTTCATGTGTA+TGG + chr4_4:58837138-58837157 Msa0690920:CDS 35.0%
GATCTACTGTCATTGTAATG+AGG + chr4_4:58837196-58837215 Msa0690920:CDS 35.0%
CTAATAACTCCTATGCTCAA+AGG - chr4_4:58837378-58837397 None:intergenic 35.0%
TTGAGCATAGGAGTTATTAG+TGG + chr4_4:58837378-58837397 Msa0690920:CDS 35.0%
!!! CCCTAACGTTGATTTTATAC+AGG + chr4_4:58837416-58837435 Msa0690920:CDS 35.0%
!! GTCGTTTTCATAAGCTATCT+TGG + chr4_4:58837746-58837765 Msa0690920:intron 35.0%
TCACATCCACAACAAATTCT+AGG + chr4_4:58837895-58837914 Msa0690920:intron 35.0%
!! TTATGGCCTAGAATTTGTTG+TGG - chr4_4:58837904-58837923 None:intergenic 35.0%
AGTCATTCCATAACCCTAAA+AGG - chr4_4:58837996-58838015 None:intergenic 35.0%
AGCAAATATAGTAAAGGGGA+GGG - chr4_4:58838334-58838353 None:intergenic 35.0%
ATGATATTTCTCAAGGACAC+AGG - chr4_4:58838384-58838403 None:intergenic 35.0%
ATAGCGAACAACAACAATCA+AGG + chr4_4:58838556-58838575 Msa0690920:intron 35.0%
!!! AATCAAGGCCTTTTTTCACT+CGG + chr4_4:58838571-58838590 Msa0690920:intron 35.0%
! AGAAAAAAGAAGGTACAGGT+AGG - chr4_4:58838676-58838695 None:intergenic 35.0%
! GACAAGAAAAAAGAAGGTAC+AGG - chr4_4:58838680-58838699 None:intergenic 35.0%
CAGCAAGACAAGAAAAAAGA+AGG - chr4_4:58838686-58838705 None:intergenic 35.0%
CTCAGGATACTTGAATAATG+AGG + chr4_4:58838751-58838770 Msa0690920:intron 35.0%
! GATTTCAGGTATCTACTCTT+AGG + chr4_4:58838894-58838913 Msa0690920:intron 35.0%
! GCTGCATTTTCTATAGATTG+CGG - chr4_4:58839119-58839138 None:intergenic 35.0%
!! AGAGGCACTTTAGAAGATTA+CGG - chr4_4:58839145-58839164 None:intergenic 35.0%
!! AATCTTCTAAAGTGCCTCTT+TGG + chr4_4:58839146-58839165 Msa0690920:intron 35.0%
TTCCCCAATTTCTTCATCTT+CGG - chr4_4:58839219-58839238 None:intergenic 35.0%
!! TGCTTGAGTTCTAAACTCTA+AGG + chr4_4:58839528-58839547 Msa0690920:CDS 35.0%
CAAAGAAAGACAATACATGG+CGG + chr4_4:58839583-58839602 Msa0690920:three_prime_UTR 35.0%
AAAGAAAGACAATACATGGC+GGG + chr4_4:58839584-58839603 Msa0690920:three_prime_UTR 35.0%
TTACCATAACATGAAACTGG+TGG + chr4_4:58839607-58839626 Msa0690920:three_prime_UTR 35.0%
! TAACTGACTAAAGGTGTACA+GGG - chr4_4:58839812-58839831 None:intergenic 35.0%
! ATAACTGACTAAAGGTGTAC+AGG - chr4_4:58839813-58839832 None:intergenic 35.0%
!!! TTAAGATTTTTGGTGGTCGA+AGG + chr4_4:58839974-58839993 Msa0690920:three_prime_UTR 35.0%
GCAGTGTAATAAACAGAACA+AGG + chr4_4:58840126-58840145 Msa0690920:three_prime_UTR 35.0%
AACTGCGTTCAAATTAGCAA+AGG + chr4_4:58840241-58840260 Msa0690920:three_prime_UTR 35.0%
CACATCTCATTATGTTTGAG+AGG + chr4_4:58840353-58840372 Msa0690920:three_prime_UTR 35.0%
CTACATGAGACTTATGGTAA+TGG - chr4_4:58840432-58840451 None:intergenic 35.0%
ACCATAAGTCTCATGTAGAT+TGG + chr4_4:58840434-58840453 Msa0690920:three_prime_UTR 35.0%
CCATAAGTCTCATGTAGATT+GGG + chr4_4:58840435-58840454 Msa0690920:three_prime_UTR 35.0%
GGAACGTAATAGCTACGTTT+AGG - chr4_4:58836179-58836198 None:intergenic 40.0%
GTGGAAATGGGGATATGAAA+GGG - chr4_4:58836200-58836219 None:intergenic 40.0%
TGTGGAAATGGGGATATGAA+AGG - chr4_4:58836201-58836220 None:intergenic 40.0%
!! GTGTGAAGGTTTTGTGTTTG+TGG - chr4_4:58836219-58836238 None:intergenic 40.0%
!!! TGTTGTGTTTTTTGAGGCTG+TGG - chr4_4:58836247-58836266 None:intergenic 40.0%
ATGAATACCAATGAGGGTGA+GGG - chr4_4:58836429-58836448 None:intergenic 40.0%
ATGTCAAGAAAAGGGTCAGT+TGG - chr4_4:58836496-58836515 None:intergenic 40.0%
GAAGCCATGGATTTGACTAA+AGG - chr4_4:58836610-58836629 None:intergenic 40.0%
TTTGTGTAAAGCAGAAGCCA+TGG - chr4_4:58836623-58836642 None:intergenic 40.0%
GGCTTCTGCTTTACACAAAA+TGG + chr4_4:58836624-58836643 Msa0690920:CDS 40.0%
CACAAAATGGGTGTTTCACA+AGG + chr4_4:58836637-58836656 Msa0690920:CDS 40.0%
! AGAACAGCCAAGAGTATAAC+AGG - chr4_4:58836703-58836722 None:intergenic 40.0%
CTCTTGGCTGTTCTGTATTT+AGG + chr4_4:58836709-58836728 Msa0690920:CDS 40.0%
!! TTGTATTCTTCTGGGACTAC+AGG + chr4_4:58836997-58837016 Msa0690920:CDS 40.0%
AACAGCTAGAAACACACTCT+TGG - chr4_4:58837118-58837137 None:intergenic 40.0%
GAGGAAATTTGACATTGACG+AGG + chr4_4:58837215-58837234 Msa0690920:CDS 40.0%
TTGACATTGACGAGGTTATC+AGG + chr4_4:58837223-58837242 Msa0690920:CDS 40.0%
TGACATTGACGAGGTTATCA+GGG + chr4_4:58837224-58837243 Msa0690920:CDS 40.0%
ATTGTCAATGCCGACAACAT+CGG - chr4_4:58837291-58837310 None:intergenic 40.0%
! GCATTGACAATGAAGGCAAA+GGG + chr4_4:58837300-58837319 Msa0690920:CDS 40.0%
!! ATGAAGGCAAAGGGTGTTAA+TGG + chr4_4:58837309-58837328 Msa0690920:CDS 40.0%
! TAAGTTGCAGAGTTTGAGAC+AGG + chr4_4:58837335-58837354 Msa0690920:CDS 40.0%
AATCAACGTTAGGGAAAGCA+TGG - chr4_4:58837410-58837429 None:intergenic 40.0%
ACTGTTATATAGGGCCTGTT+TGG + chr4_4:58837613-58837632 Msa0690920:intron 40.0%
! TAAGTTTTGCGAGACGGTTT+GGG - chr4_4:58837836-58837855 None:intergenic 40.0%
! ATAAGTTTTGCGAGACGGTT+TGG - chr4_4:58837837-58837856 None:intergenic 40.0%
AAACCGTCTCGCAAAACTTA+TGG + chr4_4:58837836-58837855 Msa0690920:intron 40.0%
GTTGTGGATGTGAACATCAA+TGG - chr4_4:58837888-58837907 None:intergenic 40.0%
CTATTCGTCAATAGGGTTGT+TGG + chr4_4:58838066-58838085 Msa0690920:CDS 40.0%
AAAGTGGTAGACTGGAACAA+TGG + chr4_4:58838106-58838125 Msa0690920:CDS 40.0%
!!! AATGGTACTTTTTTACCCCC+AGG + chr4_4:58838124-58838143 Msa0690920:CDS 40.0%
AAAGGTCTTGATTCAATGGC+TGG + chr4_4:58838248-58838267 Msa0690920:intron 40.0%
ACGAGGGAGTCTTGATATAA+AGG - chr4_4:58838311-58838330 None:intergenic 40.0%
GAGCAAATATAGTAAAGGGG+AGG - chr4_4:58838335-58838354 None:intergenic 40.0%
! TTTTCCCACCGAGTGAAAAA+AGG - chr4_4:58838582-58838601 None:intergenic 40.0%
TACAGGTAGGCTAAGGAATA+AGG - chr4_4:58838663-58838682 None:intergenic 40.0%
! AAAGATGGTTGGCTACATAC+AGG + chr4_4:58838797-58838816 Msa0690920:CDS 40.0%
! GCACTTTAGAAGATTACGGA+TGG - chr4_4:58839141-58839160 None:intergenic 40.0%
! AGTGCCGAAGATGAAGAAAT+TGG + chr4_4:58839212-58839231 Msa0690920:intron 40.0%
GTGCCGAAGATGAAGAAATT+GGG + chr4_4:58839213-58839232 Msa0690920:intron 40.0%
TGCCGAAGATGAAGAAATTG+GGG + chr4_4:58839214-58839233 Msa0690920:CDS 40.0%
AGAAATTGGGGAAATTCCAG+TGG + chr4_4:58839226-58839245 Msa0690920:CDS 40.0%
TTCTTGACAACAAATGCCAC+TGG - chr4_4:58839245-58839264 None:intergenic 40.0%
!! AGTGGCATTTGTTGTCAAGA+AGG + chr4_4:58839244-58839263 Msa0690920:CDS 40.0%
!! GCATTTGTTGTCAAGAAGGT+TGG + chr4_4:58839248-58839267 Msa0690920:CDS 40.0%
ACATAATCGACCACATGCTT+CGG - chr4_4:58839287-58839306 None:intergenic 40.0%
! GAGCAGGTTCTTCTTTTGAT+TGG + chr4_4:58839311-58839330 Msa0690920:intron 40.0%
CGCCATGTATTGTCTTTCTT+TGG - chr4_4:58839585-58839604 None:intergenic 40.0%
GGGTTACCATAACATGAAAC+TGG + chr4_4:58839604-58839623 Msa0690920:three_prime_UTR 40.0%
AGTCCACCAGTTTCATGTTA+TGG - chr4_4:58839613-58839632 None:intergenic 40.0%
!! TCAGCGGTTAAGATTTTTGG+TGG + chr4_4:58839967-58839986 Msa0690920:three_prime_UTR 40.0%
! GTTCAAATTAGCAAAGGTGC+AGG + chr4_4:58840247-58840266 Msa0690920:three_prime_UTR 40.0%
CCCAATCTACATGAGACTTA+TGG - chr4_4:58840438-58840457 None:intergenic 40.0%
! ACTTGTCGGTTGTGCCTTAA+AGG - chr4_4:58835679-58835698 None:intergenic 45.0%
!! ACGCATTTGGCTCTCAAGTT+GGG - chr4_4:58836056-58836075 None:intergenic 45.0%
!! TACGCATTTGGCTCTCAAGT+TGG - chr4_4:58836057-58836076 None:intergenic 45.0%
TGGGATCCTAAGAATAGGGT+TGG - chr4_4:58836089-58836108 None:intergenic 45.0%
!! GTGGTGTGAAGTGTTGAATG+TGG - chr4_4:58836319-58836338 None:intergenic 45.0%
GATGAATACCAATGAGGGTG+AGG - chr4_4:58836430-58836449 None:intergenic 45.0%
CAAGAAAAGGGTCAGTTGGA+AGG - chr4_4:58836492-58836511 None:intergenic 45.0%
CGTAAACAGGTTCAAGAGTG+TGG + chr4_4:58836778-58836797 Msa0690920:CDS 45.0%
TGCTGTGCCAGAAAATGAGA+AGG + chr4_4:58836873-58836892 Msa0690920:CDS 45.0%
TGGTTTATCGCTCTTTGCTG+CGG + chr4_4:58837158-58837177 Msa0690920:CDS 45.0%
TGTTGTTCCACCGATGTTGT+CGG + chr4_4:58837278-58837297 Msa0690920:CDS 45.0%
!! GTTGTCGGCATTGACAATGA+AGG + chr4_4:58837293-58837312 Msa0690920:CDS 45.0%
!! GGCATTGACAATGAAGGCAA+AGG + chr4_4:58837299-58837318 Msa0690920:CDS 45.0%
! AGTTTGAGACAGGTCTCTTG+CGG + chr4_4:58837345-58837364 Msa0690920:CDS 45.0%
! CTGCCATAAGTTTTGCGAGA+CGG - chr4_4:58837842-58837861 None:intergenic 45.0%
AGAGGGCCTTCTATTATGAG+AGG + chr4_4:58838169-58838188 Msa0690920:CDS 45.0%
!! AAAGGTTTGAGTTGCTGCAG+CGG - chr4_4:58838293-58838312 None:intergenic 45.0%
!!! AAGGCCTTTTTTCACTCGGT+GGG + chr4_4:58838575-58838594 Msa0690920:intron 45.0%
! AAGAAGGTACAGGTAGGCTA+AGG - chr4_4:58838670-58838689 None:intergenic 45.0%
AACACAGCTTCTAGATCAGC+AGG - chr4_4:58839022-58839041 None:intergenic 45.0%
!! CTTCATCTTCGGCACTGATA+TGG - chr4_4:58839208-58839227 None:intergenic 45.0%
TGTACTTTCTCCGAAGCATG+TGG + chr4_4:58839274-58839293 Msa0690920:CDS 45.0%
TTGCTCCATACAAGAAGGTC+CGG + chr4_4:58839436-58839455 Msa0690920:CDS 45.0%
TCTTCACCGACAAGATACCA+AGG + chr4_4:58839466-58839485 Msa0690920:CDS 45.0%
GTACAGGGCAGAGTAATTGA+TGG - chr4_4:58839797-58839816 None:intergenic 45.0%
!! AAGAAAAAAAATAAAATAAA+GGG - chr4_4:58839408-58839427 None:intergenic 5.0%
GGGTCAGTTGGAAGGTTTCT+AGG - chr4_4:58836484-58836503 None:intergenic 50.0%
AGGGCTAAAACCCCATCATG+AGG - chr4_4:58836541-58836560 None:intergenic 50.0%
GGGACTACAGGTGTGAGTAA+AGG + chr4_4:58837009-58837028 Msa0690920:CDS 50.0%
GGTTTATCGCTCTTTGCTGC+GGG + chr4_4:58837159-58837178 Msa0690920:CDS 50.0%
TGCTGCGGGATTATTGTCGT+TGG + chr4_4:58837173-58837192 Msa0690920:CDS 50.0%
GCTGCGGGATTATTGTCGTT+GGG + chr4_4:58837174-58837193 Msa0690920:CDS 50.0%
GACAACATCGGTGGAACAAC+AGG - chr4_4:58837279-58837298 None:intergenic 50.0%
AATGACTGAGTCGACTGCAG+TGG + chr4_4:58838009-58838028 Msa0690920:CDS 50.0%
ATGACTGAGTCGACTGCAGT+GGG + chr4_4:58838010-58838029 Msa0690920:CDS 50.0%
!! AGGGTTGTTGGCTCCAAACA+CGG + chr4_4:58838078-58838097 Msa0690920:CDS 50.0%
TCCAAACACGGAGGCAAAAG+TGG + chr4_4:58838090-58838109 Msa0690920:CDS 50.0%
!! ACCACTTTTGCCTCCGTGTT+TGG - chr4_4:58838094-58838113 None:intergenic 50.0%
ATAGTAAAGGGGAGGGACGA+GGG - chr4_4:58838327-58838346 None:intergenic 50.0%
TATAGTAAAGGGGAGGGACG+AGG - chr4_4:58838328-58838347 None:intergenic 50.0%
!!! CAAGGCCTTTTTTCACTCGG+TGG + chr4_4:58838574-58838593 Msa0690920:intron 50.0%
!! ACGGCTGCATCGACTATTTC+AGG - chr4_4:58839055-58839074 None:intergenic 50.0%
GGTCGATTATGTTGCTGAGC+AGG + chr4_4:58839295-58839314 Msa0690920:CDS 50.0%
GCAGGTTGCTCCATACAAGA+AGG + chr4_4:58839431-58839450 Msa0690920:intron 50.0%
TCCATACAAGAAGGTCCGGA+AGG + chr4_4:58839440-58839459 Msa0690920:CDS 50.0%
ACCTTCCGGACCTTCTTGTA+TGG - chr4_4:58839444-58839463 None:intergenic 50.0%
TGTCGGTGAAGAACACCTTC+CGG - chr4_4:58839458-58839477 None:intergenic 50.0%
CGGAGACCTTGGTATCTTGT+CGG - chr4_4:58839475-58839494 None:intergenic 50.0%
AAGATACCAAGGTCTCCGAC+TGG + chr4_4:58839477-58839496 Msa0690920:CDS 50.0%
AGATACCAAGGTCTCCGACT+GGG + chr4_4:58839478-58839497 Msa0690920:CDS 50.0%
TTTCGGAGGATCTTCCCAGT+CGG - chr4_4:58839495-58839514 None:intergenic 50.0%
AGATCCTCCGAAAGCAACTC+AGG + chr4_4:58839502-58839521 Msa0690920:CDS 50.0%
! AGCAGTGCCTGAGTTGCTTT+CGG - chr4_4:58839512-58839531 None:intergenic 50.0%
AGGCTGTGGCTTGAGTGTGA+AGG - chr4_4:58836233-58836252 None:intergenic 55.0%
CTCAACACCCTCACCCTCAT+TGG + chr4_4:58836419-58836438 Msa0690920:CDS 55.0%
GTCAATGCCGACAACATCGG+TGG - chr4_4:58837288-58837307 None:intergenic 55.0%
!! GTTGTTGGCTCCAAACACGG+AGG + chr4_4:58838081-58838100 Msa0690920:CDS 55.0%
CGGAGGCAAAAGTGGTAGAC+TGG + chr4_4:58838098-58838117 Msa0690920:CDS 55.0%
! TTTTTACCCCCAGGCAGCTG+CGG + chr4_4:58838133-58838152 Msa0690920:CDS 55.0%
! TGCGGTGAGCTTTGGTTGAG+AGG + chr4_4:58838151-58838170 Msa0690920:CDS 55.0%
! GCGGTGAGCTTTGGTTGAGA+GGG + chr4_4:58838152-58838171 Msa0690920:CDS 55.0%
CAGCGGTGTGACTAACGTTC+AGG - chr4_4:58838276-58838295 None:intergenic 55.0%
ATCTTCCCAGTCGGAGACCT+TGG - chr4_4:58839486-58839505 None:intergenic 55.0%
! AGTGCCTGAGTTGCTTTCGG+AGG - chr4_4:58839509-58839528 None:intergenic 55.0%
GGTGCAGCGCCTTTGAGCAT+AGG + chr4_4:58837366-58837385 Msa0690920:CDS 60.0%
TCGACTGCAGTGGGAACACG+TGG + chr4_4:58838019-58838038 Msa0690920:CDS 60.0%
AAAGCTCACCGCAGCTGCCT+GGG - chr4_4:58838144-58838163 None:intergenic 60.0%
AAGCTCACCGCAGCTGCCTG+GGG - chr4_4:58838143-58838162 None:intergenic 65.0%
CAAAGCTCACCGCAGCTGCC+TGG - chr4_4:58838145-58838164 None:intergenic 65.0%
CAGGCAGCTGCGGTGAGCTT+TGG + chr4_4:58838143-58838162 Msa0690920:CDS 65.0%
AGCTCACCGCAGCTGCCTGG+GGG - chr4_4:58838142-58838161 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 58835507 58840532 58835507 ID=Msa0690920;Name=Msa0690920
chr4_4 mRNA 58835507 58840532 58835507 ID=Msa0690920-mRNA-1;Parent=Msa0690920;Name=Msa0690920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=860|1|1|1|1|1|6|984|563
chr4_4 exon 58835507 58837437 58835507 ID=Msa0690920-mRNA-1:exon:15875;Parent=Msa0690920-mRNA-1
chr4_4 exon 58838001 58838190 58838001 ID=Msa0690920-mRNA-1:exon:15876;Parent=Msa0690920-mRNA-1
chr4_4 exon 58838756 58838901 58838756 ID=Msa0690920-mRNA-1:exon:15877;Parent=Msa0690920-mRNA-1
chr4_4 exon 58839013 58839080 58839013 ID=Msa0690920-mRNA-1:exon:15878;Parent=Msa0690920-mRNA-1
chr4_4 exon 58839214 58839316 58839214 ID=Msa0690920-mRNA-1:exon:15879;Parent=Msa0690920-mRNA-1
chr4_4 exon 58839435 58840532 58839435 ID=Msa0690920-mRNA-1:exon:15880;Parent=Msa0690920-mRNA-1
chr4_4 five_prime_UTR 58835507 58836366 58835507 ID=Msa0690920-mRNA-1:five_prime_utr;Parent=Msa0690920-mRNA-1
chr4_4 CDS 58836367 58837437 58836367 ID=Msa0690920-mRNA-1:cds;Parent=Msa0690920-mRNA-1
chr4_4 CDS 58838001 58838190 58838001 ID=Msa0690920-mRNA-1:cds;Parent=Msa0690920-mRNA-1
chr4_4 CDS 58838756 58838901 58838756 ID=Msa0690920-mRNA-1:cds;Parent=Msa0690920-mRNA-1
chr4_4 CDS 58839013 58839080 58839013 ID=Msa0690920-mRNA-1:cds;Parent=Msa0690920-mRNA-1
chr4_4 CDS 58839214 58839316 58839214 ID=Msa0690920-mRNA-1:cds;Parent=Msa0690920-mRNA-1
chr4_4 CDS 58839435 58839548 58839435 ID=Msa0690920-mRNA-1:cds;Parent=Msa0690920-mRNA-1
chr4_4 three_prime_UTR 58839549 58840532 58839549 ID=Msa0690920-mRNA-1:three_prime_utr;Parent=Msa0690920-mRNA-1
Gene Sequence

>Msa0690920

ATGGCATCTGCTACAAATTTCAACTTCGAAATCACCCAAAACAACATGATCACTCAACACCCTCACCCTCATTGGTATTCATCAAAAACTGGAATTTACAACAGTATACACTCTCCTAGAAACCTTCCAACTGACCCTTTTCTTGACATTGTTTCCTTCATTTTTTCACATCCTCATGATGGGGTTTTAGCCCTTATTGATTATTCATCTGGGTCTTCCATTTCTTACTCAAAGTTGTTACCTTTAGTCAAATCCATGGCTTCTGCTTTACACAAAATGGGTGTTTCACAAGGTGATGTTGTTTTGCTTCTACTTCCAAATTCAATTTACTATCCTGTTATACTCTTGGCTGTTCTGTATTTAGGTGCTGTTTTTACACCATTGAATCCTCTTAGTAGTGTTGGTGAAATTCGTAAACAGGTTCAAGAGTGTGGTGTGAGTTTTGCTTTTACTATACCTGAAAATGTCAAGAAACTAGAGCTATTAGGTGGCATTAATCCCATTATTGCTGTGCCAGAAAATGAGAAGGATTTGAGGAATGAGTGTTTCTCAAGTTTTTTTAACCTTCTTTATGGTAAATTTGATTTGCCTCAAAGGGTAGTTATTAAACAGGAAGATACTGCTGGTATATTGTATTCTTCTGGGACTACAGGTGTGAGTAAAGGAGTTGTTTTAACTCATAGAAATCTAATTTCTATGGTTGAGCTTTTTGTGAGATTTGAAGCTTCTCAATATGATTATTCTTGTTCCAAGAGTGTGTTTCTAGCTGTTTTGCCAATGTTTCATGTGTATGGTTTATCGCTCTTTGCTGCGGGATTATTGTCGTTGGGATCTACTGTCATTGTAATGAGGAAATTTGACATTGACGAGGTTATCAGGGTGATTGACAAATATAATGTTACACACTTTCCTGTTGTTCCACCGATGTTGTCGGCATTGACAATGAAGGCAAAGGGTGTTAATGGAAGTAAGTTGCAGAGTTTGAGACAGGTCTCTTGCGGTGCAGCGCCTTTGAGCATAGGAGTTATTAGTGGTTTTGTCCATGCTTTCCCTAACGTTGATTTTATACAGGGTTATGGAATGACTGAGTCGACTGCAGTGGGAACACGTGGCTTCAATACTGAAAAGTTTCACAACTATTCGTCAATAGGGTTGTTGGCTCCAAACACGGAGGCAAAAGTGGTAGACTGGAACAATGGTACTTTTTTACCCCCAGGCAGCTGCGGTGAGCTTTGGTTGAGAGGGCCTTCTATTATGAGAGGATACTTGAATAATGAGGAAGCTACTATATCAACAATTGATAAAGATGGTTGGCTACATACAGGAGATATTGTTTATTTTGATCAGGATGGATATTTACATTTGGCTGACCGCTTGAAAGACATTATCAAATACAAGGGATTTCAGATTGCTCCTGCTGATCTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTCGATGCAGCCGTTACAGCTGCCGAAGATGAAGAAATTGGGGAAATTCCAGTGGCATTTGTTGTCAAGAAGGTTGGAAGTGTACTTTCTCCGAAGCATGTGGTCGATTATGTTGCTGAGCAGGTTGCTCCATACAAGAAGGTCCGGAAGGTGTTCTTCACCGACAAGATACCAAGGTCTCCGACTGGGAAGATCCTCCGAAAGCAACTCAGGCACTGCTTGAGTTCTAAACTCTAA
Protein sequence

>Msa0690920

MASATNFNFEITQNNMITQHPHPHWYSSKTGIYNSIHSPRNLPTDPFLDIVSFIFSHPHDGVLALIDYSSGSSISYSKLLPLVKSMASALHKMGVSQGDVVLLLLPNSIYYPVILLAVLYLGAVFTPLNPLSSVGEIRKQVQECGVSFAFTIPENVKKLELLGGINPIIAVPENEKDLRNECFSSFFNLLYGKFDLPQRVVIKQEDTAGILYSSGTTGVSKGVVLTHRNLISMVELFVRFEASQYDYSCSKSVFLAVLPMFHVYGLSLFAAGLLSLGSTVIVMRKFDIDEVIRVIDKYNVTHFPVVPPMLSALTMKAKGVNGSKLQSLRQVSCGAAPLSIGVISGFVHAFPNVDFIQGYGMTESTAVGTRGFNTEKFHNYSSIGLLAPNTEAKVVDWNNGTFLPPGSCGELWLRGPSIMRGYLNNEEATISTIDKDGWLHTGDIVYFDQDGYLHLADRLKDIIKYKGFQIAPADLEAVLILHPEIVDAAVTAAEDEEIGEIPVAFVVKKVGSVLSPKHVVDYVAEQVAPYKKVRKVFFTDKIPRSPTGKILRKQLRHCLSSKL*