AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0116950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116950 MtrunA17_Chr1g0173551 98.817 676 6 2 1 676 1 674 0.0 1366
Msa0116950 MtrunA17_Chr4g0040791 42.379 597 326 7 84 667 57 648 3.80e-150 451
Msa0116950 MtrunA17_Chr3g0130991 26.471 544 322 18 53 552 45 554 5.54e-35 141
Msa0116950 MtrunA17_Chr7g0216911 25.254 590 348 20 16 554 7 554 3.88e-33 135
Msa0116950 MtrunA17_Chr7g0231931 37.619 210 119 4 18 221 1 204 4.45e-25 110
Msa0116950 MtrunA17_Chr4g0066951 42.105 133 75 1 81 211 11 143 2.70e-22 102
Msa0116950 MtrunA17_Chr2g0311941 39.103 156 78 3 73 211 7 162 1.91e-21 99.8
Msa0116950 MtrunA17_Chr2g0311931 37.821 156 80 2 73 211 7 162 2.71e-21 99.0
Msa0116950 MtrunA17_Chr1g0170011 37.821 156 80 2 73 211 7 162 2.90e-21 99.0
Msa0116950 MtrunA17_Chr4g0056591 38.068 176 99 2 41 214 57 224 1.69e-20 96.7
Msa0116950 MtrunA17_Chr2g0286711 34.673 199 108 4 38 220 4 196 2.47e-18 89.4
Msa0116950 MtrunA17_Chr4g0065151 35.556 135 79 2 85 211 140 274 9.32e-17 84.7
Msa0116950 MtrunA17_Chr7g0259481 26.578 301 201 9 86 375 65 356 2.15e-14 76.3
Msa0116950 MtrunA17_Chr3g0116821 29.524 210 114 3 3 211 44 220 8.45e-13 71.2
Msa0116950 MtrunA17_Chr2g0312621 28.405 257 152 9 65 319 482 708 1.13e-11 68.6
Msa0116950 MtrunA17_Chr2g0287231 31.746 126 85 1 86 210 18 143 1.31e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116950 AT5G13650.1 79.853 680 124 6 4 676 1 674 0.0 1114
Msa0116950 AT5G13650.2 79.589 681 125 6 4 676 1 675 0.0 1113
Msa0116950 AT2G31060.2 42.379 597 326 7 84 667 59 650 1.02e-150 452
Msa0116950 AT2G31060.3 42.097 601 326 8 84 667 59 654 2.29e-148 446
Msa0116950 AT2G31060.1 39.726 511 294 6 170 667 1 510 6.47e-112 347
Msa0116950 AT5G08650.2 28.862 492 266 19 82 530 84 534 4.79e-37 147
Msa0116950 AT5G08650.1 28.862 492 266 19 82 530 84 534 9.78e-37 147
Msa0116950 AT5G39900.1 27.495 491 268 18 84 526 66 516 4.18e-33 135
Msa0116950 AT1G45332.1 38.579 197 114 2 32 221 11 207 1.58e-26 115
Msa0116950 AT2G45030.1 38.342 193 112 2 36 221 15 207 8.63e-26 113
Msa0116950 AT3G22980.1 43.846 130 71 1 84 211 9 138 2.66e-23 106
Msa0116950 AT3G22980.3 43.846 130 71 1 84 211 9 138 2.66e-23 106
Msa0116950 AT3G22980.2 43.846 130 71 1 84 211 9 138 2.66e-23 106
Msa0116950 AT3G12915.2 39.103 156 78 3 73 211 7 162 2.57e-22 102
Msa0116950 AT1G56070.3 36.943 157 82 2 72 211 6 162 5.16e-21 98.6
Msa0116950 AT1G56070.2 36.943 157 82 2 72 211 6 162 5.16e-21 98.6
Msa0116950 AT1G56070.1 36.943 157 82 2 72 211 6 162 5.16e-21 98.6
Msa0116950 AT1G62750.1 36.946 203 112 4 76 262 88 290 1.60e-19 94.0
Msa0116950 AT1G06220.1 35.507 138 81 2 82 211 136 273 1.83e-18 90.5
Msa0116950 AT1G06220.3 35.507 138 81 2 82 211 136 273 1.83e-18 90.5
Msa0116950 AT1G06220.2 35.507 138 81 2 82 211 136 273 1.83e-18 90.5
Msa0116950 AT5G25230.2 33.333 138 84 2 82 211 122 259 8.97e-17 85.1
Msa0116950 AT5G25230.1 33.333 138 84 2 82 211 122 259 8.97e-17 85.1
Msa0116950 AT4G02930.1 28.452 239 160 5 86 318 69 302 9.38e-14 74.7
Msa0116950 AT4G20360.1 24.299 321 223 7 75 382 70 383 8.28e-12 68.6
Msa0116950 AT4G20360.2 24.299 321 223 7 75 382 70 383 8.28e-12 68.6
Msa0116950 AT4G11160.3 27.459 244 148 9 87 330 222 436 4.23e-11 66.6
Msa0116950 AT4G11160.1 26.639 244 150 8 87 330 220 434 7.52e-11 65.9
Msa0116950 AT4G11160.2 26.639 244 150 8 87 330 222 436 8.00e-11 65.9

Find 221 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCTTTCTTTGCAAATTT+TGG 0.054117 1_3:+36418143 None:intergenic
TGTTGGAAAATACCAATATT+TGG 0.093492 1_3:-36417796 Msa0116950:three_prime_UTR
GCAATTGTTCACATTGATTT+TGG 0.135123 1_3:-36417959 Msa0116950:three_prime_UTR
ACTCCAGGTCACTCTGATTT+TGG 0.148248 1_3:-36423489 Msa0116950:CDS
TTCTAGGTTGCTTTCGAAAA+TGG 0.150332 1_3:-36419181 Msa0116950:intron
ATGTCACCAGTAGGAATTTA+AGG 0.207959 1_3:-36421305 Msa0116950:CDS
GTTTATAAAGGTCAAATTAT+TGG 0.229789 1_3:-36419088 Msa0116950:CDS
ATATATGCAAGTGGTATAAA+AGG 0.233084 1_3:-36422804 Msa0116950:CDS
CTCACCTGATTGTTCCTTGT+TGG 0.241148 1_3:+36418997 None:intergenic
CCTCTACTAGTTCATCTTCT+TGG 0.242132 1_3:+36418198 None:intergenic
CTTCAACATTCTTATACTTT+GGG 0.253446 1_3:+36418169 None:intergenic
AACAAAAGGCGATGTGTTTA+TGG 0.254428 1_3:+36421532 None:intergenic
GAAAGAAAGATGAGGGATAT+TGG 0.261969 1_3:+36424811 None:intergenic
TCTTCAACATTCTTATACTT+TGG 0.271933 1_3:+36418168 None:intergenic
GGATCTGTTGTTGAACTTCT+TGG 0.275513 1_3:-36420197 Msa0116950:CDS
ATATCTTATGTTAAATTTGT+TGG 0.288424 1_3:-36417813 Msa0116950:three_prime_UTR
TCCAACAGCCTTGGATTGTT+TGG 0.297861 1_3:+36417474 None:intergenic
ACCTTCTTGTTGATAACTTT+GGG 0.301858 1_3:+36421053 None:intergenic
TTGAAGAAGGCTTTAGAGTT+TGG 0.304305 1_3:-36423146 Msa0116950:CDS
CCTGCTCAAAGGGTGGAGGC+TGG 0.310780 1_3:-36421751 Msa0116950:CDS
TGTTGGTTCTTCCACTTTGA+TGG 0.317235 1_3:+36421571 None:intergenic
AGGTCGTCTGCCAGATCTTC+AGG 0.317566 1_3:+36422765 None:intergenic
CTCATGATTGATTCAAATAA+TGG 0.322386 1_3:+36422738 None:intergenic
GTTGGAAAATACCAATATTT+GGG 0.327385 1_3:-36417795 Msa0116950:three_prime_UTR
TCTTCGATTCCTATGGGCCT+TGG 0.327869 1_3:-36419339 Msa0116950:CDS
AATAAACGTAACAAGCTCTT+TGG 0.328486 1_3:-36424643 Msa0116950:CDS
AACCTTCTTGTTGATAACTT+TGG 0.332209 1_3:+36421052 None:intergenic
ATGTGGAATTTCTGATGTTC+AGG 0.340072 1_3:-36421713 Msa0116950:intron
GCCATCTGACCATTTGCTTA+TGG 0.342843 1_3:+36417744 None:intergenic
GATAATGGACTCTAATGATT+TGG 0.343442 1_3:-36423589 Msa0116950:CDS
ATCCCAACCCGTGGCCTACT+TGG 0.349511 1_3:-36419415 Msa0116950:CDS
CTGCTCAAAGGGTGGAGGCT+GGG 0.350356 1_3:-36421750 Msa0116950:CDS
AGAGTGAGTGAGTGAGTTAA+GGG 0.354589 1_3:-36424761 Msa0116950:five_prime_UTR
GGCACTAGAATGTTTGCTCT+TGG 0.355483 1_3:-36417541 Msa0116950:three_prime_UTR
GCACTAGAATGTTTGCTCTT+GGG 0.365016 1_3:-36417540 Msa0116950:three_prime_UTR
AGTGAGTGAGTTAAGGGAAA+TGG 0.366884 1_3:-36424755 Msa0116950:exon
GTAGAATTGACGACAAAATC+AGG 0.368319 1_3:+36423074 None:intergenic
GTTAAGGGAAATGGAGAAAA+TGG 0.370922 1_3:-36424746 Msa0116950:exon
ACTCGGACCAACCCAAATAT+TGG 0.373758 1_3:+36417784 None:intergenic
GAGAGTGAGTGAGTGAGTTA+AGG 0.381718 1_3:-36424762 Msa0116950:five_prime_UTR
CCAGTTAACATATGTCAAAA+TGG 0.383412 1_3:+36417586 None:intergenic
CTGAAACTGCAGAATAATAT+AGG 0.383430 1_3:-36418009 Msa0116950:three_prime_UTR
GACATGAGTACTCGGGATTT+AGG 0.387481 1_3:-36419310 Msa0116950:CDS
AACAACTACTAACAAGCATT+TGG 0.388728 1_3:+36422676 None:intergenic
CCTTTATAAACTTCCGCTCC+TGG 0.389364 1_3:+36419100 None:intergenic
TCATACATGAGTTAGTTATC+TGG 0.389858 1_3:+36417498 None:intergenic
ACAAGTCCCCAGGGCGTTGA+TGG 0.390112 1_3:+36419062 None:intergenic
CAACTCTTCGAATTGCTTCA+AGG 0.391660 1_3:-36424597 Msa0116950:CDS
CTTCGATTCCTATGGGCCTT+GGG 0.393022 1_3:-36419338 Msa0116950:CDS
AGTATCAATTATATTAATCT+TGG 0.393588 1_3:+36423509 None:intergenic
CATAAAGGACGTATAGCAAT+TGG 0.396243 1_3:-36422219 Msa0116950:CDS
AGTTGGTTTGGAAGAAGATA+AGG 0.397431 1_3:+36424615 None:intergenic
TACACCGTTGGATTACAGTT+TGG 0.398617 1_3:-36418240 Msa0116950:CDS
TTGTAGGTAGATTCTGTTGA+AGG 0.404210 1_3:-36423194 Msa0116950:intron
CTTTCGGGTTCCTGCTCAAA+GGG 0.408582 1_3:-36421761 Msa0116950:CDS
GGGCAGATGTTTGTTGGTCC+AGG 0.410368 1_3:-36419118 Msa0116950:CDS
CGAACATTTGCCCACGTCTC+TGG 0.410765 1_3:+36420174 None:intergenic
TGCTCAAAGGGTGGAGGCTG+GGG 0.412757 1_3:-36421749 Msa0116950:CDS
AACACTATCTTCGATTCCTA+TGG 0.413506 1_3:-36419346 Msa0116950:CDS
AACTGTACAAGAAAGGATAA+TGG 0.414108 1_3:-36423604 Msa0116950:CDS
GTCACAGAAGAGCCTAAAAC+TGG 0.417717 1_3:-36424541 Msa0116950:intron
ACCGAGTACGAGGGACATAA+AGG 0.419215 1_3:-36422234 Msa0116950:CDS
ATCTTTGTCGGAGAACTTGT+TGG 0.423694 1_3:+36417663 None:intergenic
GTTGGTTTGGAAGAAGATAA+GGG 0.425798 1_3:+36424616 None:intergenic
AAGATCTGGCAGACGACCTT+GGG 0.426047 1_3:-36422761 Msa0116950:CDS
GGAGGTACCGGAAGAGCATA+TGG 0.426327 1_3:-36420219 Msa0116950:CDS
ACAAATCTTGTCTGTGGCAT+TGG 0.427741 1_3:+36423170 None:intergenic
AGCAATTCGAAGAGTTGGTT+TGG 0.430850 1_3:+36424603 None:intergenic
TTTGTAAAGTCATTTATTAA+CGG 0.430944 1_3:-36417903 Msa0116950:three_prime_UTR
ATCAAAATACCAATTGTTCA+TGG 0.431604 1_3:-36417872 Msa0116950:three_prime_UTR
ACATTCAAGGACAAGTCCCC+AGG 0.433072 1_3:+36419052 None:intergenic
CCAGGAGCGGAAGTTTATAA+AGG 0.433726 1_3:-36419100 Msa0116950:CDS
GATTCCTATGGGCCTTGGGC+TGG 0.434988 1_3:-36419334 Msa0116950:CDS
AATTAAAGGTTTACCTCATA+CGG 0.437885 1_3:+36421011 None:intergenic
AGGGTTGTCTCCTGAAGATC+TGG 0.440839 1_3:-36422775 Msa0116950:CDS
GACAAGATTTGTCTTGAAGA+AGG 0.440993 1_3:-36423159 Msa0116950:CDS
GCAATTGGGCGCTTGGAAGC+TGG 0.442418 1_3:-36422204 Msa0116950:CDS
GAATATGCATTAATCTTTGT+CGG 0.442968 1_3:+36417651 None:intergenic
ACAGATCCCATATGCTCTTC+CGG 0.443323 1_3:+36420212 None:intergenic
ATGGCAAAATCCAACAGCCT+TGG 0.444277 1_3:+36417465 None:intergenic
TCCTTTATGTCCCTCGTACT+CGG 0.445724 1_3:+36422233 None:intergenic
AATCCAAAATTTGCAAAGAA+AGG 0.449205 1_3:-36418146 Msa0116950:CDS
ACTAAATGCAACAGATGAAC+AGG 0.451963 1_3:-36423033 Msa0116950:intron
GGGCTGTAGTTCTGTGAATG+AGG 0.453028 1_3:-36417564 Msa0116950:three_prime_UTR
TTACGTTTATTGAAGAAAAG+TGG 0.457749 1_3:+36424655 None:intergenic
ATAATCATACCATGAACAAT+TGG 0.458504 1_3:+36417863 None:intergenic
TCTTTATCAATACGCGGTCC+AGG 0.459436 1_3:+36422708 None:intergenic
ATCCAAGTAGGCCACGGGTT+GGG 0.460594 1_3:+36419413 None:intergenic
GACCATTTGCTTATGGCGTA+TGG 0.467188 1_3:+36417751 None:intergenic
AGTAGAGCGCATCTTGAATA+TGG 0.469516 1_3:-36423460 Msa0116950:CDS
TGCTATGCTCAAACAAACTA+AGG 0.470198 1_3:-36424349 Msa0116950:intron
TCGTGAACTAGAGCGAAATC+TGG 0.471316 1_3:-36421271 Msa0116950:CDS
CTTGAAGCAATTCGAAGAGT+TGG 0.474531 1_3:+36424598 None:intergenic
TTGGGTTGGTCCGAGTGGTA+AGG 0.476173 1_3:-36417777 Msa0116950:three_prime_UTR
TATATGCAAGTGGTATAAAA+GGG 0.478105 1_3:-36422803 Msa0116950:CDS
CAAAGTGTTGGAGCCGTATG+AGG 0.479972 1_3:-36421024 Msa0116950:intron
ACGTATAGCAATTGGGCGCT+TGG 0.485428 1_3:-36422211 Msa0116950:CDS
CGTTCCAACAAGGAACAATC+AGG 0.486313 1_3:-36419001 Msa0116950:intron
CCAGTAGGAATTTAAGGGAC+AGG 0.490413 1_3:-36421299 Msa0116950:CDS
AAAGTCATTTATTAACGGTA+AGG 0.492618 1_3:-36417898 Msa0116950:three_prime_UTR
ATAATATAGGAGTTGGCAAA+AGG 0.494687 1_3:-36417996 Msa0116950:three_prime_UTR
GGGCTGGTGACATGAGTACT+CGG 0.495472 1_3:-36419318 Msa0116950:CDS
TGTTCGACATGCAAGGAGTT+GGG 0.496095 1_3:-36420157 Msa0116950:intron
ATGTTCGACATGCAAGGAGT+TGG 0.497165 1_3:-36420158 Msa0116950:CDS
GAAGATCTGGCAGACGACCT+TGG 0.497506 1_3:-36422762 Msa0116950:CDS
ATCTGGTATGTTGCTTGAGA+AGG 0.498220 1_3:+36417515 None:intergenic
TTATGCAATCGCGAGTTCAC+AGG 0.499791 1_3:-36419146 Msa0116950:CDS
ACATTCGTTGTCAGTGGACG+TGG 0.500830 1_3:-36421216 Msa0116950:CDS
GAAAATACCAATATTTGGGT+TGG 0.502739 1_3:-36417791 Msa0116950:three_prime_UTR
TTCAACATTCTTATACTTTG+GGG 0.503618 1_3:+36418170 None:intergenic
AAGGGAAGGATATGAATTCA+TGG 0.504118 1_3:-36421084 Msa0116950:CDS
CTGCAGAATAATATAGGAGT+TGG 0.506014 1_3:-36418003 Msa0116950:three_prime_UTR
GAAATGAATATGTGAGGCTA+TGG 0.506314 1_3:+36424835 None:intergenic
AAAGAGAGAAAGAAAGATGA+GGG 0.506752 1_3:+36424804 None:intergenic
GGCTGTAGTTCTGTGAATGA+GGG 0.507682 1_3:-36417563 Msa0116950:three_prime_UTR
GATTGCAACTGTGGAGGTAC+CGG 0.509796 1_3:-36420231 Msa0116950:CDS
ATACTCTACTTTGTGTTGTG+TGG 0.510689 1_3:+36424929 None:intergenic
AGAGCGAAATCTGGCTATGA+AGG 0.513710 1_3:-36421262 Msa0116950:CDS
TTGGCATCCATCAACGCCCT+GGG 0.514308 1_3:-36419069 Msa0116950:CDS
ATCCATACGCCATAAGCAAA+TGG 0.516580 1_3:-36417753 Msa0116950:three_prime_UTR
TCAACATTCTTATACTTTGG+GGG 0.516909 1_3:+36418171 None:intergenic
TTGGGATCTTATATTTGAGT+AGG 0.517140 1_3:+36419431 None:intergenic
TGTCACCAGTAGGAATTTAA+GGG 0.517563 1_3:-36421304 Msa0116950:CDS
GAAGGATATGAATTCATGGT+TGG 0.517638 1_3:-36421080 Msa0116950:CDS
TACTCGGGATTTAGGCTCGC+TGG 0.517987 1_3:-36419302 Msa0116950:intron
CCAGCCTCCACCCTTTGAGC+AGG 0.518468 1_3:+36421751 None:intergenic
TGGGTTGGTCCGAGTGGTAA+GGG 0.521124 1_3:-36417776 Msa0116950:three_prime_UTR
CTGATTGTTCCTTGTTGGAA+CGG 0.521797 1_3:+36419002 None:intergenic
GGTTCTTCCACTTTGATGGA+AGG 0.523514 1_3:+36421575 None:intergenic
CCTGTCCCTTAAATTCCTAC+TGG 0.524980 1_3:+36421299 None:intergenic
ATAATCAAACTGTACAAGAA+AGG 0.526603 1_3:-36423611 Msa0116950:CDS
ACAATTGCGGATAAATTGAC+TGG 0.526829 1_3:-36421608 Msa0116950:CDS
AGTGGTATAAAAGGGAAAGC+AGG 0.527008 1_3:-36422795 Msa0116950:CDS
ACCAAACAATCCAAGGCTGT+TGG 0.529438 1_3:-36417475 Msa0116950:three_prime_UTR
AAGGATATGAATTCATGGTT+GGG 0.529712 1_3:-36421079 Msa0116950:CDS
CATACCTCACGACCAACAAA+AGG 0.530483 1_3:+36421518 None:intergenic
ATTGGCATCCATCAACGCCC+TGG 0.530961 1_3:-36419070 Msa0116950:CDS
CAAAATTTGCAAAGAAAGGA+AGG 0.532850 1_3:-36418142 Msa0116950:CDS
GAACTTCTTGGCCAGAGACG+TGG 0.535500 1_3:-36420185 Msa0116950:CDS
TCATACACAATAGCTAGGGA+TGG 0.539235 1_3:+36417721 None:intergenic
AATGATTTGGAGCGTGAAAG+AGG 0.539302 1_3:-36423576 Msa0116950:CDS
CAACATTCTTATACTTTGGG+GGG 0.544944 1_3:+36418172 None:intergenic
TACTCTACTTTGTGTTGTGT+GGG 0.545586 1_3:+36424930 None:intergenic
AACAATTGCTATGATGAATA+CGG 0.547065 1_3:+36417973 None:intergenic
TCTTTCGGGTTCCTGCTCAA+AGG 0.547736 1_3:-36421762 Msa0116950:CDS
TGTAGGTAGATTCTGTTGAA+GGG 0.549219 1_3:-36423193 Msa0116950:intron
ATTGTTGCTCATGTTGATCA+TGG 0.551705 1_3:-36424390 Msa0116950:CDS
AATCGCGAGTTCACAGGAGA+GGG 0.552488 1_3:-36419140 Msa0116950:CDS
ATAAAGGACGTATAGCAATT+GGG 0.553689 1_3:-36422218 Msa0116950:CDS
TCCGCAATCCAAGTAGGCCA+CGG 0.557206 1_3:+36419407 None:intergenic
GGTTCCTGCTCAAAGGGTGG+AGG 0.560933 1_3:-36421755 Msa0116950:CDS
AATCCAAGTAGGCCACGGGT+TGG 0.570599 1_3:+36419412 None:intergenic
AACTTCTTGGCCAGAGACGT+GGG 0.570950 1_3:-36420184 Msa0116950:CDS
GGCTTTAGAGTTTGGCCATG+CGG 0.573945 1_3:-36423138 Msa0116950:CDS
TTCAAGACAAATCTTGTCTG+TGG 0.575760 1_3:+36423164 None:intergenic
TCGGGTTCCTGCTCAAAGGG+TGG 0.576216 1_3:-36421758 Msa0116950:CDS
TGCGGATAAATTGACTGGAA+AGG 0.576370 1_3:-36421603 Msa0116950:CDS
AAATACTAGTGGTACACGAA+TGG 0.577464 1_3:+36424901 None:intergenic
GCAATCTTCAGGCGAAGGGA+AGG 0.577717 1_3:-36421098 Msa0116950:intron
TGGTTGTGAATAAAATAGAC+AGG 0.579197 1_3:-36423109 Msa0116950:CDS
CATACACAATAGCTAGGGAT+GGG 0.580132 1_3:+36417722 None:intergenic
TCCCAAAGTTATCAACAAGA+AGG 0.580611 1_3:-36421054 Msa0116950:CDS
ATTAATATAATTGATACTCC+AGG 0.580966 1_3:-36423504 Msa0116950:CDS
GAAGGTTGATGACAAAGTGT+TGG 0.581806 1_3:-36421036 Msa0116950:CDS
ACACTATCTTCGATTCCTAT+GGG 0.582956 1_3:-36419345 Msa0116950:CDS
CTTTATCAATACGCGGTCCA+GGG 0.583068 1_3:+36422709 None:intergenic
CCGCAATCCAAGTAGGCCAC+GGG 0.583579 1_3:+36419408 None:intergenic
GGACCGCGTATTGATAAAGA+TGG 0.583967 1_3:-36422705 Msa0116950:CDS
GGCACTACCTTCCATCAAAG+TGG 0.586158 1_3:-36421582 Msa0116950:CDS
GCCATAAGCAAATGGTCAGA+TGG 0.586306 1_3:-36417745 Msa0116950:three_prime_UTR
GTTTGGCCATGCGGTTGTTG+TGG 0.587191 1_3:-36423129 Msa0116950:CDS
CGCATCTTGAATATGGTCGA+AGG 0.588221 1_3:-36423453 Msa0116950:CDS
TTCTTGTTGATAACTTTGGG+AGG 0.588955 1_3:+36421056 None:intergenic
GAAAGAGAGAAAGAAAGATG+AGG 0.590235 1_3:+36424803 None:intergenic
GGGGATATATGTGCAGTATG+TGG 0.590849 1_3:-36421730 Msa0116950:CDS
TCAATCATGAGATGTATCCC+TGG 0.590855 1_3:-36422726 Msa0116950:CDS
TCGCGAGTTCACAGGAGAGG+GGG 0.591212 1_3:-36419138 Msa0116950:CDS
GGGCAAATGTTCGACATGCA+AGG 0.592997 1_3:-36420164 Msa0116950:CDS
GGCTGGTGACATGAGTACTC+GGG 0.593870 1_3:-36419317 Msa0116950:CDS
CGTATGGATCCCTTACCACT+CGG 0.598020 1_3:+36417767 None:intergenic
GCCGATACATTCGTTGTCAG+TGG 0.600314 1_3:-36421222 Msa0116950:CDS
TAGCATTCCGCAATCCAAGT+AGG 0.603209 1_3:+36419401 None:intergenic
TATTGCAATCTTCAGGCGAA+GGG 0.603345 1_3:-36421102 Msa0116950:intron
TAGAATTGACGACAAAATCA+GGG 0.606458 1_3:+36423075 None:intergenic
GATGTTTGTTGGTCCAGGAG+CGG 0.610038 1_3:-36419113 Msa0116950:CDS
GCTGTAGTTCTGTGAATGAG+GGG 0.610911 1_3:-36417562 Msa0116950:three_prime_UTR
TGTATGAACCAAACAATCCA+AGG 0.610955 1_3:-36417482 Msa0116950:three_prime_UTR
GAGAACTTGTTGGACACACA+AGG 0.611843 1_3:+36417673 None:intergenic
CCAAGAAGATGAACTAGTAG+AGG 0.612810 1_3:-36418198 Msa0116950:CDS
ATCGCGAGTTCACAGGAGAG+GGG 0.613743 1_3:-36419139 Msa0116950:CDS
TCAGATTGGGGAGACAATTG+CGG 0.613867 1_3:-36421621 Msa0116950:intron
GGTTACAAGTACCGAGTACG+AGG 0.616452 1_3:-36422244 Msa0116950:CDS
TCCACTGACAACGAATGTAT+CGG 0.616979 1_3:+36421221 None:intergenic
GTGGTATAAAAGGGAAAGCA+GGG 0.617368 1_3:-36422794 Msa0116950:CDS
CTGGCTATGAAGGTTGAAGA+TGG 0.624559 1_3:-36421252 Msa0116950:CDS
GAGGTACCGGAAGAGCATAT+GGG 0.628156 1_3:-36420218 Msa0116950:CDS
ATGGTTGCAGATTGCAACTG+TGG 0.628451 1_3:-36420240 Msa0116950:intron
GTCACCAGCCCAAGGCCCAT+AGG 0.632808 1_3:+36419330 None:intergenic
AGGGAAAGTATGTCACCAGT+AGG 0.632996 1_3:-36421314 Msa0116950:CDS
GTACTCATGTCACCAGCCCA+AGG 0.634132 1_3:+36419322 None:intergenic
AGTGATTCTTGATACACCGT+TGG 0.636054 1_3:-36418252 Msa0116950:CDS
ATATCTACATGAATCTTCTG+AGG 0.638688 1_3:+36421819 None:intergenic
ATTGGAGAAATGAATATGTG+AGG 0.640414 1_3:+36424829 None:intergenic
AATATTTGGGTTGGTCCGAG+TGG 0.641662 1_3:-36417782 Msa0116950:three_prime_UTR
CAATCGCGAGTTCACAGGAG+AGG 0.641720 1_3:-36419141 Msa0116950:CDS
AACGAACATCCGTTCCAACA+AGG 0.643364 1_3:-36419011 Msa0116950:CDS
TGTTTGAAATGAAATACTAG+TGG 0.647492 1_3:+36424890 None:intergenic
CATTCAAGGACAAGTCCCCA+GGG 0.647653 1_3:+36419053 None:intergenic
TTGATTCAAATAATGGCCCA+AGG 0.650931 1_3:+36422745 None:intergenic
TTTCAGGTAATATATGCAAG+TGG 0.656872 1_3:-36422813 Msa0116950:CDS
TCACAACCACAACAACCGCA+TGG 0.657590 1_3:+36423123 None:intergenic
CCCGTGGCCTACTTGGATTG+CGG 0.663527 1_3:-36419408 Msa0116950:CDS
TCATCCAAACTGTAATCCAA+CGG 0.666552 1_3:+36418236 None:intergenic
GGTCGAAGGAATTCTTCTAG+TGG 0.666692 1_3:-36423439 Msa0116950:intron
AGGAATCGAAGATAGTGTTG+AGG 0.679299 1_3:+36419350 None:intergenic
AAATATAAGATCCCAACCCG+TGG 0.705474 1_3:-36419424 Msa0116950:CDS
GAGCCATCTTTATCAATACG+CGG 0.720983 1_3:+36422702 None:intergenic
TGGCATCCATCAACGCCCTG+GGG 0.724939 1_3:-36419068 Msa0116950:CDS
GTTACAAGTACCGAGTACGA+GGG 0.725606 1_3:-36422243 Msa0116950:CDS
GTTGCAGATTGCAACTGTGG+AGG 0.753115 1_3:-36420237 Msa0116950:intron
TCTGCTTCACAGAATCACAG+TGG 0.756607 1_3:+36418112 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTGTTGTTATTATA+AGG - chr1_3:36418338-36418357 Msa0116950:intron 10.0%
!!! TGGTATTTTTAAATATTTTA+TGG + chr1_3:36420031-36420050 None:intergenic 10.0%
!! AAATTGAACAATAAAAATAA+AGG + chr1_3:36420267-36420286 None:intergenic 10.0%
!!! ATAACAAATAAATTTTTTCT+CGG - chr1_3:36420366-36420385 Msa0116950:intron 10.0%
!! TACATAATTATATTAATGTA+CGG + chr1_3:36422435-36422454 None:intergenic 10.0%
!!! TTAACTGTTTTTTTTTTTTT+GGG + chr1_3:36423529-36423548 None:intergenic 10.0%
!!! TTTAACTGTTTTTTTTTTTT+TGG + chr1_3:36423530-36423549 None:intergenic 10.0%
!! AAATTCAAAAAAAATGTAAA+TGG + chr1_3:36423964-36423983 None:intergenic 10.0%
!! AAATGGAATATATTACAAAT+AGG - chr1_3:36418306-36418325 Msa0116950:intron 15.0%
!! TATATTACTTGAGTAAATTA+AGG + chr1_3:36418571-36418590 None:intergenic 15.0%
!! TAATTTACTCAAGTAATATA+CGG - chr1_3:36418571-36418590 Msa0116950:intron 15.0%
!! TTCTAACAGTTTATTTATTT+GGG - chr1_3:36418694-36418713 Msa0116950:intron 15.0%
!! AGTATCAATTATATTAATCT+TGG + chr1_3:36418896-36418915 None:intergenic 15.0%
!!! ACATATCATTTGAATTTTAA+AGG - chr1_3:36419516-36419535 Msa0116950:intron 15.0%
!! AACAATAAAAATAAAGGAAA+AGG + chr1_3:36420261-36420280 None:intergenic 15.0%
!!! TACAAATAGAAGATTTTTTT+TGG + chr1_3:36420935-36420954 None:intergenic 15.0%
!!! TAAAGCAATTTTTAGAAATT+TGG - chr1_3:36422348-36422367 Msa0116950:intron 15.0%
!!! AAAGCAATTTTTAGAAATTT+GGG - chr1_3:36422349-36422368 Msa0116950:intron 15.0%
!! ACATAATTATATTAATGTAC+GGG + chr1_3:36422434-36422453 None:intergenic 15.0%
!! TTTGTAAAGTCATTTATTAA+CGG - chr1_3:36424499-36424518 Msa0116950:intron 15.0%
!! ATATCTTATGTTAAATTTGT+TGG - chr1_3:36424589-36424608 Msa0116950:CDS 15.0%
!! AAGAATATACAAAAAATTCT+AGG + chr1_3:36424792-36424811 None:intergenic 15.0%
!!! TTTGTTTTGATTGAATTTGT+TGG - chr1_3:36417934-36417953 Msa0116950:three_prime_UTR 20.0%
!!! TTATAAAGTCAATTTTCGTA+TGG - chr1_3:36418113-36418132 Msa0116950:three_prime_UTR 20.0%
!!! TTTTTTTGAAGAAGCTAAAA+TGG - chr1_3:36418289-36418308 Msa0116950:intron 20.0%
!! CTTCTAACAGTTTATTTATT+TGG - chr1_3:36418693-36418712 Msa0116950:intron 20.0%
!!! TTGATGATGTGATATATTTA+TGG - chr1_3:36418746-36418765 Msa0116950:intron 20.0%
!!! TGATGATGTGATATATTTAT+GGG - chr1_3:36418747-36418766 Msa0116950:intron 20.0%
!! ATTAATATAATTGATACTCC+AGG - chr1_3:36418898-36418917 Msa0116950:intron 20.0%
!!! CTTAAATATGTTTTCATTCA+TGG + chr1_3:36419100-36419119 None:intergenic 20.0%
!!! TCCTTTTAATATCAAAAATG+TGG - chr1_3:36419134-36419153 Msa0116950:CDS 20.0%
!! AAATGAAATCAATAGAACAA+TGG + chr1_3:36419781-36419800 None:intergenic 20.0%
!!! TTTACCAAAACCTATAATTT+TGG + chr1_3:36420008-36420027 None:intergenic 20.0%
!! AATGAAAAATGAGAGTTTAT+TGG + chr1_3:36420051-36420070 None:intergenic 20.0%
!! GTAATGCAAAATTGAAATTA+AGG + chr1_3:36420475-36420494 None:intergenic 20.0%
!! GCAATATTATTTGAAGAAAT+TGG + chr1_3:36421286-36421305 None:intergenic 20.0%
!!! GACACAAAATTTTCAATTAA+AGG + chr1_3:36421408-36421427 None:intergenic 20.0%
!!! TTTTAATAACACAAAAGGAT+GGG + chr1_3:36421647-36421666 None:intergenic 20.0%
!!! AGCTTCTAATTACATTTTAT+TGG - chr1_3:36421733-36421752 Msa0116950:CDS 20.0%
!!! GCTTCTAATTACATTTTATT+GGG - chr1_3:36421734-36421753 Msa0116950:CDS 20.0%
!! TATTCCTAAGTTAATAGAAA+TGG + chr1_3:36422029-36422048 None:intergenic 20.0%
!!! AAGCAATTTTTAGAAATTTG+GGG - chr1_3:36422350-36422369 Msa0116950:intron 20.0%
!!! AGTGTTAGAATTTTAGTTAA+GGG + chr1_3:36422531-36422550 None:intergenic 20.0%
!! TAACAATAAAAAGAAAAGTG+TGG + chr1_3:36422574-36422593 None:intergenic 20.0%
!!! ACACTTTTCTTTTTATTGTT+AGG - chr1_3:36422573-36422592 Msa0116950:intron 20.0%
!! TCAATATCAATATAAAACAC+AGG + chr1_3:36422635-36422654 None:intergenic 20.0%
!! TTCTTAAGAGATTAGAATAT+AGG + chr1_3:36422662-36422681 None:intergenic 20.0%
!! ATATTCTAATCTCTTAAGAA+AGG - chr1_3:36422662-36422681 Msa0116950:intron 20.0%
!! GTTTATAAAGGTCAAATTAT+TGG - chr1_3:36423314-36423333 Msa0116950:intron 20.0%
!! TCCAATTTATTATCACATAA+TGG - chr1_3:36423637-36423656 Msa0116950:intron 20.0%
!!! TATAAGATACTTGGTAATTA+AGG - chr1_3:36423705-36423724 Msa0116950:intron 20.0%
!! ATATATACGAAATTGTTGAA+TGG - chr1_3:36423736-36423755 Msa0116950:intron 20.0%
!! CATTATATAAGCATGAATAT+GGG - chr1_3:36423800-36423819 Msa0116950:intron 20.0%
!! TGTTTGAAATGAAATACTAG+TGG + chr1_3:36417515-36417534 None:intergenic 25.0%
! TTACGTTTATTGAAGAAAAG+TGG + chr1_3:36417750-36417769 None:intergenic 25.0%
!! TGTGAAAAATTACCAGTTTT+AGG + chr1_3:36417876-36417895 None:intergenic 25.0%
!! TTCATAGTGTTTAGATTTTG+TGG - chr1_3:36417907-36417926 Msa0116950:three_prime_UTR 25.0%
!! TCATAGTGTTTAGATTTTGT+GGG - chr1_3:36417908-36417927 Msa0116950:three_prime_UTR 25.0%
! AGTTTATTTATTTGGGAGAA+AGG - chr1_3:36418701-36418720 Msa0116950:intron 25.0%
! ATAATCAAACTGTACAAGAA+AGG - chr1_3:36418791-36418810 Msa0116950:intron 25.0%
!! GCCACATTTTTGATATTAAA+AGG + chr1_3:36419138-36419157 None:intergenic 25.0%
! GTTAAGATTTCAAATCTTGT+TGG - chr1_3:36419485-36419504 Msa0116950:intron 25.0%
! ATATATGCAAGTGGTATAAA+AGG - chr1_3:36419598-36419617 Msa0116950:intron 25.0%
! TATATGCAAGTGGTATAAAA+GGG - chr1_3:36419599-36419618 Msa0116950:intron 25.0%
!! CTCATGATTGATTCAAATAA+TGG + chr1_3:36419667-36419686 None:intergenic 25.0%
! TTGTTTATCATATTGCTTCT+CGG - chr1_3:36419744-36419763 Msa0116950:intron 25.0%
! CATAAATGATCATGTCTATA+AGG + chr1_3:36419960-36419979 None:intergenic 25.0%
! ATGATCATTTATGAAGTTTG+TGG - chr1_3:36419967-36419986 Msa0116950:intron 25.0%
! TGATCATTTATGAAGTTTGT+GGG - chr1_3:36419968-36419987 Msa0116950:intron 25.0%
! GCTATTTAGTCCAAAATTAT+AGG - chr1_3:36419995-36420014 Msa0116950:intron 25.0%
!! TAGTCCAAAATTATAGGTTT+TGG - chr1_3:36420001-36420020 Msa0116950:intron 25.0%
!! TCAATTTTGCATTACCATTT+TGG - chr1_3:36420480-36420499 Msa0116950:intron 25.0%
! AAATCATCATTTAAGTGGTA+AGG + chr1_3:36420549-36420568 None:intergenic 25.0%
! ACGTGTATGAAAAATTCTTT+CGG - chr1_3:36420625-36420644 Msa0116950:intron 25.0%
!!! GAATTTTAATGGCTATGTTA+AGG + chr1_3:36420763-36420782 None:intergenic 25.0%
! ATAGCCATTAAAATTCAGAT+TGG - chr1_3:36420767-36420786 Msa0116950:intron 25.0%
! TAGCCATTAAAATTCAGATT+GGG - chr1_3:36420768-36420787 Msa0116950:intron 25.0%
!!! AGTACAAAATAAGTTTTAGC+TGG + chr1_3:36421064-36421083 None:intergenic 25.0%
!!! AAACTTATTTTGTACTTTCC+AGG - chr1_3:36421068-36421087 Msa0116950:CDS 25.0%
!!! AACTTATTTTGTACTTTCCA+GGG - chr1_3:36421069-36421088 Msa0116950:CDS 25.0%
! CAAATAATATTGCAATCTTC+AGG - chr1_3:36421293-36421312 Msa0116950:CDS 25.0%
! AATTAAAGGTTTACCTCATA+CGG + chr1_3:36421394-36421413 None:intergenic 25.0%
!! CTTTTAATAACACAAAAGGA+TGG + chr1_3:36421648-36421667 None:intergenic 25.0%
!! TGTGCTTTTAATAACACAAA+AGG + chr1_3:36421652-36421671 None:intergenic 25.0%
! GTAATTAGAAGCTAATGTTT+GGG + chr1_3:36421726-36421745 None:intergenic 25.0%
! TGTAATTAGAAGCTAATGTT+TGG + chr1_3:36421727-36421746 None:intergenic 25.0%
! ACACTTCATATGTAGAAAAA+GGG + chr1_3:36421942-36421961 None:intergenic 25.0%
! CTTTCCATTTCTATTAACTT+AGG - chr1_3:36422022-36422041 Msa0116950:intron 25.0%
!!! CATTTAAAGGCTTTTAGTTA+TGG - chr1_3:36422072-36422091 Msa0116950:intron 25.0%
! TTCATCCATATTGTAATTTG+TGG - chr1_3:36422138-36422157 Msa0116950:intron 25.0%
!! TCATCCATATTGTAATTTGT+GGG - chr1_3:36422139-36422158 Msa0116950:intron 25.0%
!! TTATTGCAAAAGACGTATTT+TGG - chr1_3:36422400-36422419 Msa0116950:intron 25.0%
!!! GAGTGTTAGAATTTTAGTTA+AGG + chr1_3:36422532-36422551 None:intergenic 25.0%
!! TTTTTATTGTTAGGATGTCT+CGG - chr1_3:36422582-36422601 Msa0116950:intron 25.0%
! TTAATGATCTTCTAAACTGT+AGG + chr1_3:36422884-36422903 None:intergenic 25.0%
!! TGATGATTTCATTGTTCTTT+TGG - chr1_3:36422930-36422949 Msa0116950:intron 25.0%
! CATTTCTGATCATAATACTT+GGG - chr1_3:36423132-36423151 Msa0116950:CDS 25.0%
! TTAATGAATGAAGGAAACAT+TGG + chr1_3:36423186-36423205 None:intergenic 25.0%
! AACGTATCATTAATGAATGA+AGG + chr1_3:36423195-36423214 None:intergenic 25.0%
!!! ATGATACGTTTTGAAATTCT+AGG - chr1_3:36423205-36423224 Msa0116950:intron 25.0%
!!! TTTTTTCTTGCAAACATTCA+AGG + chr1_3:36423366-36423385 None:intergenic 25.0%
! ACATAACATGTTAATTGCAA+TGG + chr1_3:36423439-36423458 None:intergenic 25.0%
! ATTGCAATTAACATGTTATG+TGG - chr1_3:36423438-36423457 Msa0116950:intron 25.0%
! GGAATATACAAATTCGATTT+AGG - chr1_3:36423459-36423478 Msa0116950:CDS 25.0%
! ATATACAAATTCGATTTAGG+TGG - chr1_3:36423462-36423481 Msa0116950:CDS 25.0%
! GCCATTATGTGATAATAAAT+TGG + chr1_3:36423641-36423660 None:intergenic 25.0%
! TAACAAATCATCATCTGAAA+AGG + chr1_3:36423762-36423781 None:intergenic 25.0%
! GCATTATATAAGCATGAATA+TGG - chr1_3:36423799-36423818 Msa0116950:intron 25.0%
! TTGCCAGTTCAATATTTATT+AGG - chr1_3:36423832-36423851 Msa0116950:intron 25.0%
! TTGCCTAATAAATATTGAAC+TGG + chr1_3:36423838-36423857 None:intergenic 25.0%
! TTCAACATTCTTATACTTTG+GGG + chr1_3:36424235-36424254 None:intergenic 25.0%
! CTTCAACATTCTTATACTTT+GGG + chr1_3:36424236-36424255 None:intergenic 25.0%
! TCTTCAACATTCTTATACTT+TGG + chr1_3:36424237-36424256 None:intergenic 25.0%
! AATCCAAAATTTGCAAAGAA+AGG - chr1_3:36424256-36424275 Msa0116950:intron 25.0%
! AACAATTGCTATGATGAATA+CGG + chr1_3:36424432-36424451 None:intergenic 25.0%
! AAAGTCATTTATTAACGGTA+AGG - chr1_3:36424504-36424523 Msa0116950:intron 25.0%
!!! ATGAACAATTGGTATTTTGA+TGG + chr1_3:36424531-36424550 None:intergenic 25.0%
! ATCAAAATACCAATTGTTCA+TGG - chr1_3:36424530-36424549 Msa0116950:intron 25.0%
! ATAATCATACCATGAACAAT+TGG + chr1_3:36424542-36424561 None:intergenic 25.0%
! TGTTGGAAAATACCAATATT+TGG - chr1_3:36424606-36424625 Msa0116950:CDS 25.0%
! GTTGGAAAATACCAATATTT+GGG - chr1_3:36424607-36424626 Msa0116950:CDS 25.0%
!! TTTTTCATACACAATAGCTA+GGG + chr1_3:36424688-36424707 None:intergenic 25.0%
! ATTGTGTATGAAAAAGAACA+CGG - chr1_3:36424693-36424712 Msa0116950:CDS 25.0%
! GAATATGCATTAATCTTTGT+CGG + chr1_3:36424754-36424773 None:intergenic 25.0%
!!! CATTTTGACATATGTTAACT+GGG - chr1_3:36424817-36424836 Msa0116950:five_prime_UTR 25.0%
!!! ATTTTGACATATGTTAACTG+GGG - chr1_3:36424818-36424837 Msa0116950:five_prime_UTR 25.0%
ATTGGAGAAATGAATATGTG+AGG + chr1_3:36417576-36417595 None:intergenic 30.0%
AAAGAGAGAAAGAAAGATGA+GGG + chr1_3:36417601-36417620 None:intergenic 30.0%
!!! GTTTTTCTTTGGAAGTGTTA+AGG + chr1_3:36417718-36417737 None:intergenic 30.0%
AATAAACGTAACAAGCTCTT+TGG - chr1_3:36417759-36417778 Msa0116950:three_prime_UTR 30.0%
!!! TGAATTTGTTGGTTTTTCAG+AGG - chr1_3:36417945-36417964 Msa0116950:three_prime_UTR 30.0%
TACCATTTGAGTAGTACTTA+CGG + chr1_3:36418141-36418160 None:intergenic 30.0%
AGTACTACTCAAATGGTAAA+TGG - chr1_3:36418143-36418162 Msa0116950:CDS 30.0%
GCATCGTAGTACTATATATA+TGG - chr1_3:36418526-36418545 Msa0116950:intron 30.0%
!! ATCCTTTTGTTTATGCAGTT+TGG + chr1_3:36418638-36418657 None:intergenic 30.0%
GAAACACAAATCGTAAACAA+TGG + chr1_3:36418667-36418686 None:intergenic 30.0%
! ATATTTATGGGCTTTTGTAC+AGG - chr1_3:36418759-36418778 Msa0116950:intron 30.0%
AACTGTACAAGAAAGGATAA+TGG - chr1_3:36418798-36418817 Msa0116950:intron 30.0%
!! GATAATGGACTCTAATGATT+TGG - chr1_3:36418813-36418832 Msa0116950:intron 30.0%
ATGGCAAAGTGAAAAGAATA+TGG + chr1_3:36419081-36419100 None:intergenic 30.0%
!!! AAGCTTCTCTTTGTTTTTGT+AGG - chr1_3:36419192-36419211 Msa0116950:intron 30.0%
TGGTTGTGAATAAAATAGAC+AGG - chr1_3:36419293-36419312 Msa0116950:intron 30.0%
TAGAATTGACGACAAAATCA+GGG + chr1_3:36419330-36419349 None:intergenic 30.0%
! TTTCAGGTAATATATGCAAG+TGG - chr1_3:36419589-36419608 Msa0116950:intron 30.0%
AACAACTACTAACAAGCATT+TGG + chr1_3:36419729-36419748 None:intergenic 30.0%
AAGTTAAGTAGAACTTAGAG+AGG + chr1_3:36419923-36419942 None:intergenic 30.0%
TGATCATGTCTATAAGGAAA+TGG + chr1_3:36419954-36419973 None:intergenic 30.0%
CATACACTCATTCATTAACT+AGG - chr1_3:36420137-36420156 Msa0116950:intron 30.0%
ATAAAGGACGTATAGCAATT+GGG - chr1_3:36420184-36420203 Msa0116950:CDS 30.0%
! GTATTTTCCGTTTCAATCTT+CGG - chr1_3:36420423-36420442 Msa0116950:intron 30.0%
! TATTTTCCGTTTCAATCTTC+GGG - chr1_3:36420424-36420443 Msa0116950:intron 30.0%
GGACAAAATCATCATTTAAG+TGG + chr1_3:36420554-36420573 None:intergenic 30.0%
! CTTAAATGATGATTTTGTCC+AGG - chr1_3:36420554-36420573 Msa0116950:intron 30.0%
ATATCTACATGAATCTTCTG+AGG + chr1_3:36420586-36420605 None:intergenic 30.0%
CGTGTATGAAAAATTCTTTC+GGG - chr1_3:36420626-36420645 Msa0116950:intron 30.0%
TGATGTTCAGGTAAATATTG+AGG - chr1_3:36420701-36420720 Msa0116950:intron 30.0%
GATGTTCAGGTAAATATTGA+GGG - chr1_3:36420702-36420721 Msa0116950:intron 30.0%
! AGGTAAATATTGAGGGTTTT+AGG - chr1_3:36420709-36420728 Msa0116950:intron 30.0%
AGCCATTAAAATTCAGATTG+GGG - chr1_3:36420769-36420788 Msa0116950:intron 30.0%
TCGGATATCAACAAAGTAAA+AGG + chr1_3:36420958-36420977 None:intergenic 30.0%
! TGGACACAATAATTGCTATT+AGG - chr1_3:36420988-36421007 Msa0116950:intron 30.0%
AAGGATATGAATTCATGGTT+GGG - chr1_3:36421323-36421342 Msa0116950:intron 30.0%
!! ACCTTCTTGTTGATAACTTT+GGG + chr1_3:36421352-36421371 None:intergenic 30.0%
!! AACCTTCTTGTTGATAACTT+TGG + chr1_3:36421353-36421372 None:intergenic 30.0%
AGTTCTACAGGAAAATAACT+AGG + chr1_3:36421484-36421503 None:intergenic 30.0%
ACGTAATTACGCAATAGATT+AGG + chr1_3:36421616-36421635 None:intergenic 30.0%
AAGCACATGAATATTTGTGA+TGG - chr1_3:36421665-36421684 Msa0116950:intron 30.0%
AATGTGCTAAATGTTAAGAG+AGG - chr1_3:36421792-36421811 Msa0116950:CDS 30.0%
GACACTTCATATGTAGAAAA+AGG + chr1_3:36421943-36421962 None:intergenic 30.0%
! CATGTTTTATGACTTGAACT+AGG - chr1_3:36421967-36421986 Msa0116950:intron 30.0%
TAGAAATGGAAAGAAAGAAC+AGG + chr1_3:36422015-36422034 None:intergenic 30.0%
!! GCTAAAGTTGTGTCATTTAA+AGG - chr1_3:36422059-36422078 Msa0116950:intron 30.0%
ATATGGATGAAATGTGTGAA+GGG + chr1_3:36422129-36422148 None:intergenic 30.0%
AATATGGATGAAATGTGTGA+AGG + chr1_3:36422130-36422149 None:intergenic 30.0%
! AAAAAGAAAAGTGTGGACTT+GGG + chr1_3:36422567-36422586 None:intergenic 30.0%
! TAAAAAGAAAAGTGTGGACT+TGG + chr1_3:36422568-36422587 None:intergenic 30.0%
TTCGATAGATTTGTATGTTG+TGG - chr1_3:36422608-36422627 Msa0116950:intron 30.0%
TATGACACAGACATAAGTAT+GGG + chr1_3:36422731-36422750 None:intergenic 30.0%
CATCAGATTAACATAGCATT+CGG - chr1_3:36422905-36422924 Msa0116950:intron 30.0%
TTGGGATCTTATATTTGAGT+AGG + chr1_3:36422974-36422993 None:intergenic 30.0%
GCATTTCTGATCATAATACT+TGG - chr1_3:36423131-36423150 Msa0116950:CDS 30.0%
!! ATGCAATTTCTGGTTCTTTA+AGG - chr1_3:36423489-36423508 Msa0116950:CDS 30.0%
AACTGCAAGTATAAGATACT+TGG - chr1_3:36423696-36423715 Msa0116950:intron 30.0%
ACAATTTCGTATATATGCTG+TGG + chr1_3:36423732-36423751 None:intergenic 30.0%
!! GATGATTTGTTATGAATCCT+AGG - chr1_3:36423770-36423789 Msa0116950:intron 30.0%
TTATATAATGCCATCAACCT+AGG + chr1_3:36423790-36423809 None:intergenic 30.0%
ACCAAAAACAAAACTGGAAA+TGG + chr1_3:36423906-36423925 None:intergenic 30.0%
GCAGATAATTGGAAACTTAA+AGG + chr1_3:36423940-36423959 None:intergenic 30.0%
ATGTAAATGGTGCAGATAAT+TGG + chr1_3:36423951-36423970 None:intergenic 30.0%
!!! ATTTTTTCAGAAAAGCTACC+CGG - chr1_3:36424052-36424071 Msa0116950:intron 30.0%
TCAACATTCTTATACTTTGG+GGG + chr1_3:36424234-36424253 None:intergenic 30.0%
! CTTCCTTTCTTTGCAAATTT+TGG + chr1_3:36424262-36424281 None:intergenic 30.0%
CAAAATTTGCAAAGAAAGGA+AGG - chr1_3:36424260-36424279 Msa0116950:intron 30.0%
CTGAAACTGCAGAATAATAT+AGG - chr1_3:36424393-36424412 Msa0116950:CDS 30.0%
ATAATATAGGAGTTGGCAAA+AGG - chr1_3:36424406-36424425 Msa0116950:CDS 30.0%
!!! GCAATTGTTCACATTGATTT+TGG - chr1_3:36424443-36424462 Msa0116950:intron 30.0%
!!! ATTGTTCACATTGATTTTGG+AGG - chr1_3:36424446-36424465 Msa0116950:intron 30.0%
GAAAATACCAATATTTGGGT+TGG - chr1_3:36424611-36424630 Msa0116950:CDS 30.0%
!! CTTTTTCATACACAATAGCT+AGG + chr1_3:36424689-36424708 None:intergenic 30.0%
CCAGTTAACATATGTCAAAA+TGG + chr1_3:36424819-36424838 None:intergenic 30.0%
!! CCATTTTGACATATGTTAAC+TGG - chr1_3:36424816-36424835 Msa0116950:five_prime_UTR 30.0%
TCATACATGAGTTAGTTATC+TGG + chr1_3:36424907-36424926 None:intergenic 30.0%
TACTCTACTTTGTGTTGTGT+GGG + chr1_3:36417475-36417494 None:intergenic 35.0%
ATACTCTACTTTGTGTTGTG+TGG + chr1_3:36417476-36417495 None:intergenic 35.0%
AAATACTAGTGGTACACGAA+TGG + chr1_3:36417504-36417523 None:intergenic 35.0%
GAAATGAATATGTGAGGCTA+TGG + chr1_3:36417570-36417589 None:intergenic 35.0%
GAAAGAAAGATGAGGGATAT+TGG + chr1_3:36417594-36417613 None:intergenic 35.0%
GAAAGAGAGAAAGAAAGATG+AGG + chr1_3:36417602-36417621 None:intergenic 35.0%
GTTAAGGGAAATGGAGAAAA+TGG - chr1_3:36417656-36417675 Msa0116950:three_prime_UTR 35.0%
! GGAGAAGAAGAGTTTTTCTT+TGG + chr1_3:36417729-36417748 None:intergenic 35.0%
!! GTTGGTTTGGAAGAAGATAA+GGG + chr1_3:36417789-36417808 None:intergenic 35.0%
!! AGTTGGTTTGGAAGAAGATA+AGG + chr1_3:36417790-36417809 None:intergenic 35.0%
ATTGTTGCTCATGTTGATCA+TGG - chr1_3:36418012-36418031 Msa0116950:three_prime_UTR 35.0%
TGCTATGCTCAAACAAACTA+AGG - chr1_3:36418053-36418072 Msa0116950:three_prime_UTR 35.0%
ACCATTTGAGTAGTACTTAC+GGG + chr1_3:36418140-36418159 None:intergenic 35.0%
! CATTTTTGATATGTGAGTCG+CGG - chr1_3:36418175-36418194 Msa0116950:CDS 35.0%
! ATTTTTGATATGTGAGTCGC+GGG - chr1_3:36418176-36418195 Msa0116950:CDS 35.0%
CTCATATATAGACACAGAAG+AGG - chr1_3:36418391-36418410 Msa0116950:intron 35.0%
TTGTAGGTAGATTCTGTTGA+AGG - chr1_3:36419208-36419227 Msa0116950:intron 35.0%
TGTAGGTAGATTCTGTTGAA+GGG - chr1_3:36419209-36419228 Msa0116950:intron 35.0%
TTCAAGACAAATCTTGTCTG+TGG + chr1_3:36419241-36419260 None:intergenic 35.0%
GACAAGATTTGTCTTGAAGA+AGG - chr1_3:36419243-36419262 Msa0116950:intron 35.0%
!! TTGAAGAAGGCTTTAGAGTT+TGG - chr1_3:36419256-36419275 Msa0116950:intron 35.0%
GTAGAATTGACGACAAAATC+AGG + chr1_3:36419331-36419350 None:intergenic 35.0%
ACTAAATGCAACAGATGAAC+AGG - chr1_3:36419369-36419388 Msa0116950:CDS 35.0%
!! GCGTGCTTTGAAAATTAAGT+TGG - chr1_3:36419429-36419448 Msa0116950:CDS 35.0%
AGATTTCAAATCTTGTTGGC+TGG - chr1_3:36419489-36419508 Msa0116950:intron 35.0%
TTGATTCAAATAATGGCCCA+AGG + chr1_3:36419660-36419679 None:intergenic 35.0%
ATGTGCTCCTACTTATTTAC+TGG - chr1_3:36419820-36419839 Msa0116950:intron 35.0%
TCCTACTTATTTACTGGCAA+GGG - chr1_3:36419826-36419845 Msa0116950:intron 35.0%
! TTTACCAGTTGATTCAGTTG+AGG - chr1_3:36419879-36419898 Msa0116950:intron 35.0%
! TTACCAGTTGATTCAGTTGA+GGG - chr1_3:36419880-36419899 Msa0116950:intron 35.0%
CATAAAGGACGTATAGCAAT+TGG - chr1_3:36420183-36420202 Msa0116950:CDS 35.0%
!!! GAAGCTGGAGTTTTAGAAAA+AGG - chr1_3:36420213-36420232 Msa0116950:CDS 35.0%
!!! TGGAGTTTTAGAAAAAGGCA+TGG - chr1_3:36420218-36420237 Msa0116950:CDS 35.0%
TGAATTCCTACTTCGCTAAT+TGG - chr1_3:36420300-36420319 Msa0116950:intron 35.0%
TGGACCATGTGATGAATATT+TGG - chr1_3:36420320-36420339 Msa0116950:intron 35.0%
GGACCATGTGATGAATATTT+GGG - chr1_3:36420321-36420340 Msa0116950:intron 35.0%
ATGCCCAAATATTCATCACA+TGG + chr1_3:36420327-36420346 None:intergenic 35.0%
! ATTTTCCGTTTCAATCTTCG+GGG - chr1_3:36420425-36420444 Msa0116950:intron 35.0%
! ATATCCTCTATTTCTTGCAG+TGG + chr1_3:36420514-36420533 None:intergenic 35.0%
ATGTGGAATTTCTGATGTTC+AGG - chr1_3:36420689-36420708 Msa0116950:intron 35.0%
! CTCCCCAATCTGAATTTTAA+TGG + chr1_3:36420774-36420793 None:intergenic 35.0%
ACAATTGCGGATAAATTGAC+TGG - chr1_3:36420794-36420813 Msa0116950:intron 35.0%
! GAGAAAGACATTTTCACTGT+TGG + chr1_3:36420851-36420870 None:intergenic 35.0%
AACAAAAGGCGATGTGTTTA+TGG + chr1_3:36420873-36420892 None:intergenic 35.0%
! ATAAACACATCGCCTTTTGT+TGG - chr1_3:36420872-36420891 Msa0116950:intron 35.0%
GCTATTAGGTTAAGCTTTCT+TGG - chr1_3:36421002-36421021 Msa0116950:intron 35.0%
ATGTCACCAGTAGGAATTTA+AGG - chr1_3:36421097-36421116 Msa0116950:intron 35.0%
TGTCACCAGTAGGAATTTAA+GGG - chr1_3:36421098-36421117 Msa0116950:intron 35.0%
AAGGGAAGGATATGAATTCA+TGG - chr1_3:36421318-36421337 Msa0116950:intron 35.0%
GAAGGATATGAATTCATGGT+TGG - chr1_3:36421322-36421341 Msa0116950:intron 35.0%
!! TTCTTGTTGATAACTTTGGG+AGG + chr1_3:36421349-36421368 None:intergenic 35.0%
TCCCAAAGTTATCAACAAGA+AGG - chr1_3:36421348-36421367 Msa0116950:intron 35.0%
! GAACTAACATGCTTAGCTTT+AGG - chr1_3:36421499-36421518 Msa0116950:intron 35.0%
AGCAGCTAATCATGTCAATT+AGG + chr1_3:36421536-36421555 None:intergenic 35.0%
ATTACGCAATAGATTAGGAC+AGG + chr1_3:36421611-36421630 None:intergenic 35.0%
GGAAAGTGATTATTGAGTGT+TGG + chr1_3:36421705-36421724 None:intergenic 35.0%
CCTTAAGACATTGGGTATAT+GGG + chr1_3:36421821-36421840 None:intergenic 35.0%
ACCTTAAGACATTGGGTATA+TGG + chr1_3:36421822-36421841 None:intergenic 35.0%
! TACCCAATGTCTTAAGGTTT+TGG - chr1_3:36421824-36421843 Msa0116950:CDS 35.0%
! ACCCAATGTCTTAAGGTTTT+GGG - chr1_3:36421825-36421844 Msa0116950:CDS 35.0%
ACCCAAAACCTTAAGACATT+GGG + chr1_3:36421829-36421848 None:intergenic 35.0%
! GTTCTGAATTCTTGTGTTTC+TGG - chr1_3:36421859-36421878 Msa0116950:intron 35.0%
CCATCCCACAAATTACAATA+TGG + chr1_3:36422146-36422165 None:intergenic 35.0%
! CCATATTGTAATTTGTGGGA+TGG - chr1_3:36422143-36422162 Msa0116950:intron 35.0%
! CTATAAAGGTGTAACTTTGG+CGG + chr1_3:36422312-36422331 None:intergenic 35.0%
! CTGCTATAAAGGTGTAACTT+TGG + chr1_3:36422315-36422334 None:intergenic 35.0%
TCAATGCTATGCTGCTATAA+AGG + chr1_3:36422326-36422345 None:intergenic 35.0%
ATGGGCAATGAAAATGACAT+CGG + chr1_3:36422713-36422732 None:intergenic 35.0%
CTATGACACAGACATAAGTA+TGG + chr1_3:36422732-36422751 None:intergenic 35.0%
CGAATGCTATGTTAATCTGA+TGG + chr1_3:36422907-36422926 None:intergenic 35.0%
! TCATTGTTCTTTTGGCAGAT+CGG - chr1_3:36422938-36422957 Msa0116950:intron 35.0%
!!! CTATTTTAACTGCTTCTCGA+GGG - chr1_3:36423021-36423040 Msa0116950:intron 35.0%
AACACTATCTTCGATTCCTA+TGG - chr1_3:36423056-36423075 Msa0116950:CDS 35.0%
ACACTATCTTCGATTCCTAT+GGG - chr1_3:36423057-36423076 Msa0116950:CDS 35.0%
!! CATAAGCGTTGGATATCAAA+AGG + chr1_3:36423159-36423178 None:intergenic 35.0%
! TTCTAGGTTGCTTTCGAAAA+TGG - chr1_3:36423221-36423240 Msa0116950:intron 35.0%
! TGTTATGAATCCTAGGTTGA+TGG - chr1_3:36423777-36423796 Msa0116950:intron 35.0%
AGTACAAACAGACAGCTTAA+AGG + chr1_3:36423876-36423895 None:intergenic 35.0%
!!! GCCATTTCCAGTTTTGTTTT+TGG - chr1_3:36423902-36423921 Msa0116950:intron 35.0%
!!! TTTTGTTTTTGGTCCCACTT+AGG - chr1_3:36423913-36423932 Msa0116950:intron 35.0%
GAAACTTAAAGGACCTAAGT+GGG + chr1_3:36423929-36423948 None:intergenic 35.0%
! TGAGTGAACGTAAAGTTTTC+CGG + chr1_3:36424074-36424093 None:intergenic 35.0%
TCATCCAAACTGTAATCCAA+CGG + chr1_3:36424169-36424188 None:intergenic 35.0%
CAACATTCTTATACTTTGGG+GGG + chr1_3:36424233-36424252 None:intergenic 35.0%
CTGCAGAATAATATAGGAGT+TGG - chr1_3:36424399-36424418 Msa0116950:CDS 35.0%
TGTATGAAAAAGAACACGGA+TGG - chr1_3:36424697-36424716 Msa0116950:CDS 35.0%
GTATGAAAAAGAACACGGAT+GGG - chr1_3:36424698-36424717 Msa0116950:CDS 35.0%
TGTATGAACCAAACAATCCA+AGG - chr1_3:36424920-36424939 Msa0116950:five_prime_UTR 35.0%
AGAGTGAGTGAGTGAGTTAA+GGG - chr1_3:36417641-36417660 Msa0116950:three_prime_UTR 40.0%
AGTGAGTGAGTTAAGGGAAA+TGG - chr1_3:36417647-36417666 Msa0116950:three_prime_UTR 40.0%
! AGCAATTCGAAGAGTTGGTT+TGG + chr1_3:36417802-36417821 None:intergenic 40.0%
CTTGAAGCAATTCGAAGAGT+TGG + chr1_3:36417807-36417826 None:intergenic 40.0%
CAACTCTTCGAATTGCTTCA+AGG - chr1_3:36417805-36417824 Msa0116950:three_prime_UTR 40.0%
TCCCGTAAGTACTACTCAAA+TGG - chr1_3:36418136-36418155 Msa0116950:exon 40.0%
ACACTAAGTGCAGACAAGTA+GGG + chr1_3:36418220-36418239 None:intergenic 40.0%
TAGCTACTCTATAGTCTCAG+AGG - chr1_3:36418599-36418618 Msa0116950:intron 40.0%
TACTCTATAGTCTCAGAGGT+AGG - chr1_3:36418603-36418622 Msa0116950:intron 40.0%
GGCCAAACTGCATAAACAAA+AGG - chr1_3:36418633-36418652 Msa0116950:intron 40.0%
! AATGATTTGGAGCGTGAAAG+AGG - chr1_3:36418826-36418845 Msa0116950:intron 40.0%
AGTAGAGCGCATCTTGAATA+TGG - chr1_3:36418942-36418961 Msa0116950:intron 40.0%
GAATATGGCAAAGTGCATGA+GGG + chr1_3:36419066-36419085 None:intergenic 40.0%
AGAATATGGCAAAGTGCATG+AGG + chr1_3:36419067-36419086 None:intergenic 40.0%
ACAAATCTTGTCTGTGGCAT+TGG + chr1_3:36419235-36419254 None:intergenic 40.0%
GTTGGAACTTGCAAGTTTGT+CGG - chr1_3:36419447-36419466 Msa0116950:CDS 40.0%
! CTTTTTGCAGTGTGACTTTC+AGG - chr1_3:36419573-36419592 Msa0116950:intron 40.0%
AGTGGTATAAAAGGGAAAGC+AGG - chr1_3:36419607-36419626 Msa0116950:intron 40.0%
GTGGTATAAAAGGGAAAGCA+GGG - chr1_3:36419608-36419627 Msa0116950:intron 40.0%
TCAATCATGAGATGTATCCC+TGG - chr1_3:36419676-36419695 Msa0116950:intron 40.0%
GAGCCATCTTTATCAATACG+CGG + chr1_3:36419703-36419722 None:intergenic 40.0%
CTCCTACTTATTTACTGGCA+AGG - chr1_3:36419825-36419844 Msa0116950:intron 40.0%
TCCCTTGCCAGTAAATAAGT+AGG + chr1_3:36419830-36419849 None:intergenic 40.0%
ATTCCCTCAACTGAATCAAC+TGG + chr1_3:36419886-36419905 None:intergenic 40.0%
! AGAAAAAGGCATGGAAGTCA+AGG - chr1_3:36420227-36420246 Msa0116950:CDS 40.0%
ATCTGAGAATAGTGAGCTAG+TGG + chr1_3:36420400-36420419 None:intergenic 40.0%
! CAGTGGACTTTGAACCAAAA+TGG + chr1_3:36420497-36420516 None:intergenic 40.0%
AAGTCCACTGCAAGAAATAG+AGG - chr1_3:36420507-36420526 Msa0116950:intron 40.0%
!! AATCTTCTGAGGTACAAACC+TGG + chr1_3:36420575-36420594 None:intergenic 40.0%
TGCGGATAAATTGACTGGAA+AGG - chr1_3:36420799-36420818 Msa0116950:intron 40.0%
!! TGTTGGTTCTTCCACTTTGA+TGG + chr1_3:36420834-36420853 None:intergenic 40.0%
TCCACTGACAACGAATGTAT+CGG + chr1_3:36421184-36421203 None:intergenic 40.0%
ATATTGCAATCTTCAGGCGA+AGG - chr1_3:36421299-36421318 Msa0116950:CDS 40.0%
TATTGCAATCTTCAGGCGAA+GGG - chr1_3:36421300-36421319 Msa0116950:CDS 40.0%
!! GAAGGTTGATGACAAAGTGT+TGG - chr1_3:36421366-36421385 Msa0116950:intron 40.0%
!! GCTAAGCATGTTAGTTCTAC+AGG + chr1_3:36421496-36421515 None:intergenic 40.0%
TTACCGTGTCTGTTACATGA+AGG - chr1_3:36421563-36421582 Msa0116950:CDS 40.0%
TGACCTTCATGTAACAGACA+CGG + chr1_3:36421569-36421588 None:intergenic 40.0%
TCTGTTACATGAAGGTCAGT+TGG - chr1_3:36421571-36421590 Msa0116950:CDS 40.0%
AGCACATTCATACTCGATGT+GGG + chr1_3:36421780-36421799 None:intergenic 40.0%
TAGCACATTCATACTCGATG+TGG + chr1_3:36421781-36421800 None:intergenic 40.0%
CCCATATACCCAATGTCTTA+AGG - chr1_3:36421818-36421837 Msa0116950:CDS 40.0%
CACCCAAAACCTTAAGACAT+TGG + chr1_3:36421830-36421849 None:intergenic 40.0%
!!! CAATGTCTTAAGGTTTTGGG+TGG - chr1_3:36421828-36421847 Msa0116950:CDS 40.0%
!!! CATTAGCTCGTTGTTGCTTT+TGG - chr1_3:36421884-36421903 Msa0116950:intron 40.0%
CATAAAGTTACTCTCCAGGT+GGG + chr1_3:36421912-36421931 None:intergenic 40.0%
GGATCTGTTGTTGAACTTCT+TGG - chr1_3:36422205-36422224 Msa0116950:CDS 40.0%
ATCGGATCGACATGAGAATT+GGG + chr1_3:36422695-36422714 None:intergenic 40.0%
TATGTCTGTGTCATAGCGAT+CGG - chr1_3:36422736-36422755 Msa0116950:CDS 40.0%
AAATATAAGATCCCAACCCG+TGG - chr1_3:36422978-36422997 Msa0116950:intron 40.0%
!!! GCTATTTTAACTGCTTCTCG+AGG - chr1_3:36423020-36423039 Msa0116950:intron 40.0%
AGGAATCGAAGATAGTGTTG+AGG + chr1_3:36423055-36423074 None:intergenic 40.0%
ACATTGGCAAACATAAGCGT+TGG + chr1_3:36423170-36423189 None:intergenic 40.0%
CTGATTGTTCCTTGTTGGAA+CGG + chr1_3:36423403-36423422 None:intergenic 40.0%
AGGTGGTTTGATGCAATTTC+TGG - chr1_3:36423479-36423498 Msa0116950:CDS 40.0%
CAAACAGACAGCTTAAAGGA+CGG + chr1_3:36423872-36423891 None:intergenic 40.0%
AGTGGGACCAAAAACAAAAC+TGG + chr1_3:36423912-36423931 None:intergenic 40.0%
GGAAACTTAAAGGACCTAAG+TGG + chr1_3:36423930-36423949 None:intergenic 40.0%
! AAATGTGTATGCCGCTTCTA+TGG - chr1_3:36423992-36424011 Msa0116950:intron 40.0%
! AATGTGTATGCCGCTTCTAT+GGG - chr1_3:36423993-36424012 Msa0116950:intron 40.0%
! GAGTGAACGTAAAGTTTTCC+GGG + chr1_3:36424073-36424092 None:intergenic 40.0%
AATCACTGCACAAGGAAACA+AGG + chr1_3:36424137-36424156 None:intergenic 40.0%
GTATCAAGAATCACTGCACA+AGG + chr1_3:36424145-36424164 None:intergenic 40.0%
AGTGATTCTTGATACACCGT+TGG - chr1_3:36424150-36424169 Msa0116950:intron 40.0%
TACACCGTTGGATTACAGTT+TGG - chr1_3:36424162-36424181 Msa0116950:intron 40.0%
CCTCTACTAGTTCATCTTCT+TGG + chr1_3:36424207-36424226 None:intergenic 40.0%
CCAAGAAGATGAACTAGTAG+AGG - chr1_3:36424204-36424223 Msa0116950:intron 40.0%
ATCCATACGCCATAAGCAAA+TGG - chr1_3:36424649-36424668 Msa0116950:CDS 40.0%
CATACACAATAGCTAGGGAT+GGG + chr1_3:36424683-36424702 None:intergenic 40.0%
TCATACACAATAGCTAGGGA+TGG + chr1_3:36424684-36424703 None:intergenic 40.0%
ATCTTTGTCGGAGAACTTGT+TGG + chr1_3:36424742-36424761 None:intergenic 40.0%
GCACTAGAATGTTTGCTCTT+GGG - chr1_3:36424862-36424881 Msa0116950:five_prime_UTR 40.0%
! ATCTGGTATGTTGCTTGAGA+AGG + chr1_3:36424890-36424909 None:intergenic 40.0%
GAGAGTGAGTGAGTGAGTTA+AGG - chr1_3:36417640-36417659 Msa0116950:three_prime_UTR 45.0%
GTCACAGAAGAGCCTAAAAC+TGG - chr1_3:36417861-36417880 Msa0116950:three_prime_UTR 45.0%
CACACTAAGTGCAGACAAGT+AGG + chr1_3:36418221-36418240 None:intergenic 45.0%
! TGTGTTTGAGTTTCGCTGCA+AGG - chr1_3:36418237-36418256 Msa0116950:CDS 45.0%
ATTTGGCCCAAACGTGTGTT+AGG - chr1_3:36418462-36418481 Msa0116950:intron 45.0%
GTTTGGCCTAACACACGTTT+GGG + chr1_3:36418471-36418490 None:intergenic 45.0%
AGTTTGGCCTAACACACGTT+TGG + chr1_3:36418472-36418491 None:intergenic 45.0%
GTTAGGCCAAACTGTTGTTG+CGG - chr1_3:36418479-36418498 Msa0116950:intron 45.0%
TTAGGCCAAACTGTTGTTGC+GGG - chr1_3:36418480-36418499 Msa0116950:intron 45.0%
! ACTCCAGGTCACTCTGATTT+TGG - chr1_3:36418913-36418932 Msa0116950:intron 45.0%
! CTCCAGGTCACTCTGATTTT+GGG - chr1_3:36418914-36418933 Msa0116950:intron 45.0%
! TCCAGGTCACTCTGATTTTG+GGG - chr1_3:36418915-36418934 Msa0116950:intron 45.0%
CGCATCTTGAATATGGTCGA+AGG - chr1_3:36418949-36418968 Msa0116950:intron 45.0%
GGTCGAAGGAATTCTTCTAG+TGG - chr1_3:36418963-36418982 Msa0116950:intron 45.0%
CTTTATCAATACGCGGTCCA+GGG + chr1_3:36419696-36419715 None:intergenic 45.0%
TCTTTATCAATACGCGGTCC+AGG + chr1_3:36419697-36419716 None:intergenic 45.0%
! GGACCGCGTATTGATAAAGA+TGG - chr1_3:36419697-36419716 Msa0116950:intron 45.0%
!! GTTACAAGTACCGAGTACGA+GGG - chr1_3:36420159-36420178 Msa0116950:CDS 45.0%
TCCTTTATGTCCCTCGTACT+CGG + chr1_3:36420172-36420191 None:intergenic 45.0%
CATGGTCCAATTAGCGAAGT+AGG + chr1_3:36420309-36420328 None:intergenic 45.0%
AGCTTCCCCGAAGATTGAAA+CGG + chr1_3:36420433-36420452 None:intergenic 45.0%
AGCTGGAGCAGAGATTATTG+AGG - chr1_3:36420449-36420468 Msa0116950:intron 45.0%
GGGGATATATGTGCAGTATG+TGG - chr1_3:36420672-36420691 Msa0116950:intron 45.0%
TCAGATTGGGGAGACAATTG+CGG - chr1_3:36420781-36420800 Msa0116950:intron 45.0%
GGTTCTTCCACTTTGATGGA+AGG + chr1_3:36420830-36420849 None:intergenic 45.0%
CATACCTCACGACCAACAAA+AGG + chr1_3:36420887-36420906 None:intergenic 45.0%
TGATATCCGATGCTGTCTGT+TGG - chr1_3:36420968-36420987 Msa0116950:intron 45.0%
TTGTGTCCAACAGACAGCAT+CGG + chr1_3:36420977-36420996 None:intergenic 45.0%
TACTGGTGACATACTTTCCC+TGG + chr1_3:36421089-36421108 None:intergenic 45.0%
! AGGGAAAGTATGTCACCAGT+AGG - chr1_3:36421088-36421107 Msa0116950:CDS 45.0%
CCTGTCCCTTAAATTCCTAC+TGG + chr1_3:36421106-36421125 None:intergenic 45.0%
CCAGTAGGAATTTAAGGGAC+AGG - chr1_3:36421103-36421122 Msa0116950:intron 45.0%
TCGTGAACTAGAGCGAAATC+TGG - chr1_3:36421131-36421150 Msa0116950:intron 45.0%
AGAGCGAAATCTGGCTATGA+AGG - chr1_3:36421140-36421159 Msa0116950:intron 45.0%
CTGGCTATGAAGGTTGAAGA+TGG - chr1_3:36421150-36421169 Msa0116950:intron 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG - chr1_3:36421836-36421855 Msa0116950:intron 45.0%
!!! AAGGTTTTGGGTGGAGATGT+GGG - chr1_3:36421837-36421856 Msa0116950:intron 45.0%
CCATAAAGTTACTCTCCAGG+TGG + chr1_3:36421913-36421932 None:intergenic 45.0%
CCACCTGGAGAGTAACTTTA+TGG - chr1_3:36421910-36421929 Msa0116950:intron 45.0%
CCTCCATAAAGTTACTCTCC+AGG + chr1_3:36421916-36421935 None:intergenic 45.0%
CCTGGAGAGTAACTTTATGG+AGG - chr1_3:36421913-36421932 Msa0116950:intron 45.0%
ATGGTTGCAGATTGCAACTG+TGG - chr1_3:36422162-36422181 Msa0116950:intron 45.0%
ACAGATCCCATATGCTCTTC+CGG + chr1_3:36422193-36422212 None:intergenic 45.0%
ATGTTCGACATGCAAGGAGT+TGG - chr1_3:36422244-36422263 Msa0116950:CDS 45.0%
TGTTCGACATGCAAGGAGTT+GGG - chr1_3:36422245-36422264 Msa0116950:CDS 45.0%
CATCGGATCGACATGAGAAT+TGG + chr1_3:36422696-36422715 None:intergenic 45.0%
! TTGTTCTTTTGGCAGATCGG+AGG - chr1_3:36422941-36422960 Msa0116950:intron 45.0%
! TGTTCTTTTGGCAGATCGGA+GGG - chr1_3:36422942-36422961 Msa0116950:intron 45.0%
TAGCATTCCGCAATCCAAGT+AGG + chr1_3:36423004-36423023 None:intergenic 45.0%
GACATGAGTACTCGGGATTT+AGG - chr1_3:36423092-36423111 Msa0116950:CDS 45.0%
TTATGCAATCGCGAGTTCAC+AGG - chr1_3:36423256-36423275 Msa0116950:intron 45.0%
CCTTTATAAACTTCCGCTCC+TGG + chr1_3:36423305-36423324 None:intergenic 45.0%
CCAGGAGCGGAAGTTTATAA+AGG - chr1_3:36423302-36423321 Msa0116950:intron 45.0%
AACGAACATCCGTTCCAACA+AGG - chr1_3:36423391-36423410 Msa0116950:intron 45.0%
CGTTCCAACAAGGAACAATC+AGG - chr1_3:36423401-36423420 Msa0116950:intron 45.0%
CTCACCTGATTGTTCCTTGT+TGG + chr1_3:36423408-36423427 None:intergenic 45.0%
TCTGCTTCACAGAATCACAG+TGG + chr1_3:36424293-36424312 None:intergenic 45.0%
ACTCGGACCAACCCAAATAT+TGG + chr1_3:36424621-36424640 None:intergenic 45.0%
!! AATATTTGGGTTGGTCCGAG+TGG - chr1_3:36424620-36424639 Msa0116950:CDS 45.0%
GACCATTTGCTTATGGCGTA+TGG + chr1_3:36424654-36424673 None:intergenic 45.0%
GCCATAAGCAAATGGTCAGA+TGG - chr1_3:36424657-36424676 Msa0116950:CDS 45.0%
GCCATCTGACCATTTGCTTA+TGG + chr1_3:36424661-36424680 None:intergenic 45.0%
TGAAAAAGAACACGGATGGG+AGG - chr1_3:36424701-36424720 Msa0116950:CDS 45.0%
!! GAGAACTTGTTGGACACACA+AGG + chr1_3:36424732-36424751 None:intergenic 45.0%
! GGCTGTAGTTCTGTGAATGA+GGG - chr1_3:36424839-36424858 Msa0116950:five_prime_UTR 45.0%
! GCTGTAGTTCTGTGAATGAG+GGG - chr1_3:36424840-36424859 Msa0116950:five_prime_UTR 45.0%
GGCACTAGAATGTTTGCTCT+TGG - chr1_3:36424861-36424880 Msa0116950:five_prime_UTR 45.0%
ACCAAACAATCCAAGGCTGT+TGG - chr1_3:36424927-36424946 Msa0116950:five_prime_UTR 45.0%
TCCAACAGCCTTGGATTGTT+TGG + chr1_3:36424931-36424950 None:intergenic 45.0%
!! AATAATGATATATAAAATAA+AGG + chr1_3:36422823-36422842 None:intergenic 5.0%
TGCAGACAAGTAGGGAATCG+CGG + chr1_3:36418212-36418231 None:intergenic 50.0%
TCGCTGCAAGGCTCTTAAAG+AGG - chr1_3:36418249-36418268 Msa0116950:CDS 50.0%
TTGGGCCAAATGCAAGGACA+GGG + chr1_3:36418453-36418472 None:intergenic 50.0%
TTTGGGCCAAATGCAAGGAC+AGG + chr1_3:36418454-36418473 None:intergenic 50.0%
ACACGTTTGGGCCAAATGCA+AGG + chr1_3:36418459-36418478 None:intergenic 50.0%
TAGGCCAAACTGTTGTTGCG+GGG - chr1_3:36418481-36418500 Msa0116950:intron 50.0%
TGAACCCCGCAACAACAGTT+TGG + chr1_3:36418488-36418507 None:intergenic 50.0%
AAACTGTTGTTGCGGGGTTC+AGG - chr1_3:36418487-36418506 Msa0116950:intron 50.0%
AACTGTTGTTGCGGGGTTCA+GGG - chr1_3:36418488-36418507 Msa0116950:intron 50.0%
GTCTCAGAGGTAGGCACAAT+TGG - chr1_3:36418612-36418631 Msa0116950:intron 50.0%
! CCAGGTCACTCTGATTTTGG+GGG - chr1_3:36418916-36418935 Msa0116950:intron 50.0%
!! GGCTTTAGAGTTTGGCCATG+CGG - chr1_3:36419264-36419283 Msa0116950:intron 50.0%
TCACAACCACAACAACCGCA+TGG + chr1_3:36419282-36419301 None:intergenic 50.0%
AGGGTTGTCTCCTGAAGATC+TGG - chr1_3:36419627-36419646 Msa0116950:intron 50.0%
AAGATCTGGCAGACGACCTT+GGG - chr1_3:36419641-36419660 Msa0116950:intron 50.0%
!! GGTTACAAGTACCGAGTACG+AGG - chr1_3:36420158-36420177 Msa0116950:CDS 50.0%
ACCGAGTACGAGGGACATAA+AGG - chr1_3:36420168-36420187 Msa0116950:CDS 50.0%
ACGTATAGCAATTGGGCGCT+TGG - chr1_3:36420191-36420210 Msa0116950:CDS 50.0%
GTTTCAATCTTCGGGGAAGC+TGG - chr1_3:36420432-36420451 Msa0116950:intron 50.0%
!! TCTTTCGGGTTCCTGCTCAA+AGG - chr1_3:36420640-36420659 Msa0116950:intron 50.0%
!! CTTTCGGGTTCCTGCTCAAA+GGG - chr1_3:36420641-36420660 Msa0116950:intron 50.0%
GGCACTACCTTCCATCAAAG+TGG - chr1_3:36420820-36420839 Msa0116950:intron 50.0%
! ATCGCCTTTTGTTGGTCGTG+AGG - chr1_3:36420880-36420899 Msa0116950:intron 50.0%
GCCGATACATTCGTTGTCAG+TGG - chr1_3:36421180-36421199 Msa0116950:intron 50.0%
ACATTCGTTGTCAGTGGACG+TGG - chr1_3:36421186-36421205 Msa0116950:CDS 50.0%
!! CAAAGTGTTGGAGCCGTATG+AGG - chr1_3:36421378-36421397 Msa0116950:intron 50.0%
GTTGCAGATTGCAACTGTGG+AGG - chr1_3:36422165-36422184 Msa0116950:intron 50.0%
! GATTGCAACTGTGGAGGTAC+CGG - chr1_3:36422171-36422190 Msa0116950:intron 50.0%
!! GAGGTACCGGAAGAGCATAT+GGG - chr1_3:36422184-36422203 Msa0116950:CDS 50.0%
AACTTCTTGGCCAGAGACGT+GGG - chr1_3:36422218-36422237 Msa0116950:CDS 50.0%
GGGCAAATGTTCGACATGCA+AGG - chr1_3:36422238-36422257 Msa0116950:CDS 50.0%
AGATATCTCGCCACACAAGC+TGG - chr1_3:36422486-36422505 Msa0116950:intron 50.0%
CTCCACATAACCAGCTTGTG+TGG + chr1_3:36422499-36422518 None:intergenic 50.0%
TCTTCGATTCCTATGGGCCT+TGG - chr1_3:36423063-36423082 Msa0116950:CDS 50.0%
CTTCGATTCCTATGGGCCTT+GGG - chr1_3:36423064-36423083 Msa0116950:CDS 50.0%
AATCGCGAGTTCACAGGAGA+GGG - chr1_3:36423262-36423281 Msa0116950:intron 50.0%
! GATGTTTGTTGGTCCAGGAG+CGG - chr1_3:36423289-36423308 Msa0116950:intron 50.0%
CATTCAAGGACAAGTCCCCA+GGG + chr1_3:36423352-36423371 None:intergenic 50.0%
ACATTCAAGGACAAGTCCCC+AGG + chr1_3:36423353-36423372 None:intergenic 50.0%
ATAAGCTGCGCCCATAGAAG+CGG + chr1_3:36424006-36424025 None:intergenic 50.0%
CGTATGGATCCCTTACCACT+CGG + chr1_3:36424638-36424657 None:intergenic 50.0%
! GGGCTGTAGTTCTGTGAATG+AGG - chr1_3:36424838-36424857 Msa0116950:five_prime_UTR 50.0%
GCAGACAAGTAGGGAATCGC+GGG + chr1_3:36418211-36418230 None:intergenic 55.0%
AATGCAAGGACAGGGGTGGA+GGG + chr1_3:36418445-36418464 None:intergenic 55.0%
AAATGCAAGGACAGGGGTGG+AGG + chr1_3:36418446-36418465 None:intergenic 55.0%
TCCACCCCTGTCCTTGCATT+TGG - chr1_3:36418445-36418464 Msa0116950:intron 55.0%
TGGGCCAAATGCAAGGACAG+GGG + chr1_3:36418452-36418471 None:intergenic 55.0%
ACTGTTGTTGCGGGGTTCAG+GGG - chr1_3:36418489-36418508 Msa0116950:intron 55.0%
CCCCCAAAATCAGAGTGACC+TGG + chr1_3:36418919-36418938 None:intergenic 55.0%
GTTTGGCCATGCGGTTGTTG+TGG - chr1_3:36419273-36419292 Msa0116950:intron 55.0%
AGGTCGTCTGCCAGATCTTC+AGG + chr1_3:36419640-36419659 None:intergenic 55.0%
GAAGATCTGGCAGACGACCT+TGG - chr1_3:36419640-36419659 Msa0116950:intron 55.0%
GCAATCTTCAGGCGAAGGGA+AGG - chr1_3:36421304-36421323 Msa0116950:CDS 55.0%
!!! TGTTGCTTTTGGCTCCCACC+TGG - chr1_3:36421895-36421914 Msa0116950:intron 55.0%
!! GGAGGTACCGGAAGAGCATA+TGG - chr1_3:36422183-36422202 Msa0116950:CDS 55.0%
GAACTTCTTGGCCAGAGACG+TGG - chr1_3:36422217-36422236 Msa0116950:CDS 55.0%
CGAACATTTGCCCACGTCTC+TGG + chr1_3:36422231-36422250 None:intergenic 55.0%
CGCCACACAAGCTGGTTATG+TGG - chr1_3:36422494-36422513 Msa0116950:intron 55.0%
ATCCAAGTAGGCCACGGGTT+GGG + chr1_3:36422992-36423011 None:intergenic 55.0%
AATCCAAGTAGGCCACGGGT+TGG + chr1_3:36422993-36423012 None:intergenic 55.0%
TCCGCAATCCAAGTAGGCCA+CGG + chr1_3:36422998-36423017 None:intergenic 55.0%
GTACTCATGTCACCAGCCCA+AGG + chr1_3:36423083-36423102 None:intergenic 55.0%
! GGGCTGGTGACATGAGTACT+CGG - chr1_3:36423084-36423103 Msa0116950:CDS 55.0%
GGCTGGTGACATGAGTACTC+GGG - chr1_3:36423085-36423104 Msa0116950:CDS 55.0%
TACTCGGGATTTAGGCTCGC+TGG - chr1_3:36423100-36423119 Msa0116950:CDS 55.0%
CAATCGCGAGTTCACAGGAG+AGG - chr1_3:36423261-36423280 Msa0116950:intron 55.0%
ATCGCGAGTTCACAGGAGAG+GGG - chr1_3:36423263-36423282 Msa0116950:intron 55.0%
GAGAGGGGGCAGATGTTTGT+TGG - chr1_3:36423278-36423297 Msa0116950:intron 55.0%
! GGGCAGATGTTTGTTGGTCC+AGG - chr1_3:36423284-36423303 Msa0116950:intron 55.0%
ATTGGCATCCATCAACGCCC+TGG - chr1_3:36423332-36423351 Msa0116950:intron 55.0%
TTGGCATCCATCAACGCCCT+GGG - chr1_3:36423333-36423352 Msa0116950:intron 55.0%
!! TTGGGTTGGTCCGAGTGGTA+AGG - chr1_3:36424625-36424644 Msa0116950:CDS 55.0%
!! TGGGTTGGTCCGAGTGGTAA+GGG - chr1_3:36424626-36424645 Msa0116950:CDS 55.0%
GCCAAATGCAAGGACAGGGG+TGG + chr1_3:36418449-36418468 None:intergenic 60.0%
GCAATTGGGCGCTTGGAAGC+TGG - chr1_3:36420198-36420217 Msa0116950:CDS 60.0%
TCGGGTTCCTGCTCAAAGGG+TGG - chr1_3:36420644-36420663 Msa0116950:intron 60.0%
GGTTCCTGCTCAAAGGGTGG+AGG - chr1_3:36420647-36420666 Msa0116950:intron 60.0%
CTGCTCAAAGGGTGGAGGCT+GGG - chr1_3:36420652-36420671 Msa0116950:intron 60.0%
TGCTCAAAGGGTGGAGGCTG+GGG - chr1_3:36420653-36420672 Msa0116950:intron 60.0%
ATCCCAACCCGTGGCCTACT+TGG - chr1_3:36422987-36423006 Msa0116950:intron 60.0%
CCGCAATCCAAGTAGGCCAC+GGG + chr1_3:36422997-36423016 None:intergenic 60.0%
CCCGTGGCCTACTTGGATTG+CGG - chr1_3:36422994-36423013 Msa0116950:intron 60.0%
GATTCCTATGGGCCTTGGGC+TGG - chr1_3:36423068-36423087 Msa0116950:CDS 60.0%
TCGCGAGTTCACAGGAGAGG+GGG - chr1_3:36423264-36423283 Msa0116950:intron 60.0%
TGGCATCCATCAACGCCCTG+GGG - chr1_3:36423334-36423353 Msa0116950:intron 60.0%
!! ACAAGTCCCCAGGGCGTTGA+TGG + chr1_3:36423343-36423362 None:intergenic 60.0%
CCAGCCTCCACCCTTTGAGC+AGG + chr1_3:36420654-36420673 None:intergenic 65.0%
CCTGCTCAAAGGGTGGAGGC+TGG - chr1_3:36420651-36420670 Msa0116950:intron 65.0%
GTCACCAGCCCAAGGCCCAT+AGG + chr1_3:36423075-36423094 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 36417468 36424956 36417468 ID=Msa0116950;Name=Msa0116950
chr1_3 mRNA 36417468 36424956 36417468 ID=Msa0116950-mRNA-1;Parent=Msa0116950;Name=Msa0116950-mRNA-1;_AED=0.09;_eAED=0.09;_QI=198|1|1|1|1|1|14|671|676
chr1_3 exon 36417468 36418272 36417468 ID=Msa0116950-mRNA-1:exon:11723;Parent=Msa0116950-mRNA-1
chr1_3 exon 36419002 36419197 36419002 ID=Msa0116950-mRNA-1:exon:11722;Parent=Msa0116950-mRNA-1
chr1_3 exon 36419303 36419468 36419303 ID=Msa0116950-mRNA-1:exon:11721;Parent=Msa0116950-mRNA-1
chr1_3 exon 36420158 36420252 36420158 ID=Msa0116950-mRNA-1:exon:11720;Parent=Msa0116950-mRNA-1
chr1_3 exon 36421025 36421109 36421025 ID=Msa0116950-mRNA-1:exon:11719;Parent=Msa0116950-mRNA-1
chr1_3 exon 36421183 36421334 36421183 ID=Msa0116950-mRNA-1:exon:11718;Parent=Msa0116950-mRNA-1
chr1_3 exon 36421523 36421639 36421523 ID=Msa0116950-mRNA-1:exon:11717;Parent=Msa0116950-mRNA-1
chr1_3 exon 36421714 36421848 36421714 ID=Msa0116950-mRNA-1:exon:11716;Parent=Msa0116950-mRNA-1
chr1_3 exon 36422176 36422265 36422176 ID=Msa0116950-mRNA-1:exon:11715;Parent=Msa0116950-mRNA-1
chr1_3 exon 36422689 36422841 36422689 ID=Msa0116950-mRNA-1:exon:11714;Parent=Msa0116950-mRNA-1
chr1_3 exon 36423034 36423210 36423034 ID=Msa0116950-mRNA-1:exon:11713;Parent=Msa0116950-mRNA-1
chr1_3 exon 36423440 36423643 36423440 ID=Msa0116950-mRNA-1:exon:11712;Parent=Msa0116950-mRNA-1
chr1_3 exon 36424350 36424459 36424350 ID=Msa0116950-mRNA-1:exon:11711;Parent=Msa0116950-mRNA-1
chr1_3 exon 36424542 36424956 36424542 ID=Msa0116950-mRNA-1:exon:11710;Parent=Msa0116950-mRNA-1
chr1_3 five_prime_UTR 36424759 36424956 36424759 ID=Msa0116950-mRNA-1:five_prime_utr;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36424542 36424758 36424542 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36424350 36424459 36424350 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36423440 36423643 36423440 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36423034 36423210 36423034 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36422689 36422841 36422689 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36422176 36422265 36422176 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36421714 36421848 36421714 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36421523 36421639 36421523 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36421183 36421334 36421183 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36421025 36421109 36421025 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36420158 36420252 36420158 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36419303 36419468 36419303 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36419002 36419197 36419002 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 CDS 36418139 36418272 36418139 ID=Msa0116950-mRNA-1:cds;Parent=Msa0116950-mRNA-1
chr1_3 three_prime_UTR 36417468 36418138 36417468 ID=Msa0116950-mRNA-1:three_prime_utr;Parent=Msa0116950-mRNA-1
Gene Sequence

>Msa0116950

ATGGAGAAAATGGCACTTACTGTTCAAAACTCTTCATTGTTATTCTCATCCTTAACACTTCCAAAGAAAAACTCTTCTTCTCCACTTTTCTTCAATAAACGTAACAAGCTCTTTGGACTTCCCTTATCTTCTTCCAAACCAACTCTTCGAATTGCTTCAAGGAACAATAAAGCAATTAAATGTTCAATTTCAGAAGTCACAGAAGAGCCTAAAACTGAGGAGAAGAAGAAATTGATGAGAAGAGCAGATATTAGAAATATTGCGATTGTTGCTCATGTTGATCATGGTAAAACAACTCTCGTTGATGCTATGCTCAAACAAACTAAGGTGTTTCGTGATAATCAAACTGTACAAGAAAGGATAATGGACTCTAATGATTTGGAGCGTGAAAGAGGAATCACTATACTGAGTAAAAATACATCTGTGACTTATAAAGATGCCAAGATTAATATAATTGATACTCCAGGTCACTCTGATTTTGGGGGTGAAGTAGAGCGCATCTTGAATATGGTCGAAGGAATTCTTCTAGTGGTAGATTCTGTTGAAGGGCCAATGCCACAGACAAGATTTGTCTTGAAGAAGGCTTTAGAGTTTGGCCATGCGGTTGTTGTGGTTGTGAATAAAATAGACAGGTCTTCTGCTCGCCCTGATTTTGTCGTCAATTCTACTTTTGAACTCTTCATTGAACTAAATGCAACAGATGAACAGTGTGACTTTCAGGTAATATATGCAAGTGGTATAAAAGGGAAAGCAGGGTTGTCTCCTGAAGATCTGGCAGACGACCTTGGGCCATTATTTGAATCAATCATGAGATGTATCCCTGGACCGCGTATTGATAAAGATGGCTCACTCCAAATGCTTGTTACAAGTACCGAGTACGAGGGACATAAAGGACGTATAGCAATTGGGCGCTTGGAAGCTGGAGTTTTAGAAAAAGGCATGGAAGTCAAGGTTTGTACCTCAGAAGATTCATGTAGATATGCAAGAGTTAGTGAGCTTTACGTGTATGAAAAATTCTTTCGGGTTCCTGCTCAAAGGGTGGAGGCTGGGGATATATGTGCAGTATGTGGAATTTCTGATGTTCAGATTGGGGAGACAATTGCGGATAAATTGACTGGAAAGGCACTACCTTCCATCAAAGTGGAAGAACCAACAGTGAAAATGTCTTTCTCCATAAACACATCGCCTTTTGTTGGTCGTGAGGGAAAGTATGTCACCAGTAGGAATTTAAGGGACAGGCTTTATCGTGAACTAGAGCGAAATCTGGCTATGAAGGTTGAAGATGGTGAAACAGCCGATACATTCGTTGTCAGTGGACGTGGAACACTGCATATCACTATACTCATTGAAAATATGCGAAGGGAAGGATATGAATTCATGGTTGGGCCTCCCAAAGTTATCAACAAGAAGGTTGATGACAAAGTGTTGGAGCCGTATGAGATTGCAACTGTGGAGGTACCGGAAGAGCATATGGGATCTGTTGTTGAACTTCTTGGCCAGAGACGTGGGCAAATGTTCGACATGCAAGGAGTTGGATCGGAGGGAACTAACCTACTCAAATATAAGATCCCAACCCGTGGCCTACTTGGATTGCGGAATGCTATTTTAACTGCTTCTCGAGGGACAGCTATCCTCAACACTATCTTCGATTCCTATGGGCCTTGGGCTGGTGACATGAGTACTCGGGATTTAGGCTCGCTGGTTGCTTTCGAAAATGGAACAGTTACTTCTTATGCAATCGCGAGTTCACAGGAGAGGGGGCAGATGTTTGTTGGTCCAGGAGCGGAAGTTTATAAAGGTCAAATTATTGGCATCCATCAACGCCCTGGGGACTTGTCCTTGAATGTTTGCAAGAAAAAAGCTGCAACGAACATCCGTTCCAACAAGGAACAATCAGTGATTCTTGATACACCGTTGGATTACAGTTTGGATGACTGCATTGAATACATCCAAGAAGATGAACTAGTAGAGGTCACCCCCCAAAGTATAAGAATGTTGAAGAATCCAAAATTTGCAAAGAAAGGAAGGTAA
Protein sequence

>Msa0116950

MEKMALTVQNSSLLFSSLTLPKKNSSSPLFFNKRNKLFGLPLSSSKPTLRIASRNNKAIKCSISEVTEEPKTEEKKKLMRRADIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQTVQERIMDSNDLERERGITILSKNTSVTYKDAKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRSSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGKAGLSPEDLADDLGPLFESIMRCIPGPRIDKDGSLQMLVTSTEYEGHKGRIAIGRLEAGVLEKGMEVKVCTSEDSCRYARVSELYVYEKFFRVPAQRVEAGDICAVCGISDVQIGETIADKLTGKALPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFVVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVDDKVLEPYEIATVEVPEEHMGSVVELLGQRRGQMFDMQGVGSEGTNLLKYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDMSTRDLGSLVAFENGTVTSYAIASSQERGQMFVGPGAEVYKGQIIGIHQRPGDLSLNVCKKKAATNIRSNKEQSVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMLKNPKFAKKGR*