AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1032190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1032190 MtrunA17_Chr7g0254121 78.241 432 58 5 1 429 1 399 0.0 659
Msa1032190 MtrunA17_Chr4g0022501 46.997 383 156 12 54 428 89 432 6.87e-105 317
Msa1032190 MtrunA17_Chr6g0452631 41.002 439 211 7 6 428 26 432 3.79e-102 310
Msa1032190 MtrunA17_Chr2g0317441 41.628 430 184 9 16 429 46 424 2.17e-99 303
Msa1032190 MtrunA17_Chr6g0460801 76.437 174 38 1 259 429 231 404 4.05e-95 291
Msa1032190 MtrunA17_Chr6g0460801 63.690 168 59 1 1 166 1 168 5.97e-72 231
Msa1032190 MtrunA17_Chr4g0010141 41.689 379 186 5 54 429 73 419 6.22e-94 289
Msa1032190 MtrunA17_Chr4g0063621 39.894 376 161 5 55 428 76 388 1.96e-83 261
Msa1032190 MtrunA17_Chr1g0208381 36.776 397 189 8 50 429 46 397 1.28e-73 236
Msa1032190 MtrunA17_Chr1g0169461 36.316 380 206 8 51 428 93 438 4.53e-69 225
Msa1032190 MtrunA17_Chr4g0002191 34.726 383 215 8 50 429 57 407 1.22e-61 205
Msa1032190 MtrunA17_Chr2g0307111 34.821 112 58 2 315 426 2 98 4.38e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1032190 AT3G03690.1 55.211 355 119 7 22 372 24 342 4.99e-120 355
Msa1032190 AT4G27480.2 46.335 382 159 8 54 429 80 421 4.07e-110 331
Msa1032190 AT4G27480.3 46.335 382 159 8 54 429 80 421 4.07e-110 331
Msa1032190 AT4G27480.1 46.335 382 159 8 54 429 80 421 4.07e-110 331
Msa1032190 AT1G03520.2 45.932 381 169 9 51 428 11 357 3.13e-106 318
Msa1032190 AT4G03340.1 42.729 447 197 13 6 428 36 447 7.04e-106 321
Msa1032190 AT1G03520.1 45.932 381 169 9 51 428 100 446 2.87e-105 319
Msa1032190 AT1G53100.1 42.500 440 199 11 4 428 22 422 4.42e-105 318
Msa1032190 AT3G15350.2 46.719 381 161 9 54 429 81 424 5.80e-103 313
Msa1032190 AT3G15350.1 46.719 381 161 9 54 429 81 424 5.80e-103 313
Msa1032190 AT1G53100.2 43.326 427 188 11 4 415 22 409 7.70e-103 312
Msa1032190 AT5G39990.1 44.330 388 179 7 46 429 93 447 2.49e-101 309
Msa1032190 AT5G15050.1 43.767 377 181 4 54 429 88 434 3.75e-98 300
Msa1032190 AT4G03340.2 39.821 447 187 14 6 428 36 424 2.09e-90 280
Msa1032190 AT2G37585.1 38.462 377 180 7 54 429 59 384 5.62e-80 252
Msa1032190 AT1G71070.1 36.364 385 206 8 50 429 45 395 3.51e-73 235
Msa1032190 AT3G24040.1 33.679 386 221 6 46 428 61 414 2.91e-65 215
Msa1032190 AT3G03690.2 64.384 146 50 2 21 166 23 166 2.09e-54 180

Find 115 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATTTGATTTCCATTTAA+TGG 0.125261 7_1:+67136054 Msa1032190:three_prime_UTR
CTTACAGATTGTTTAGAATT+TGG 0.148661 7_1:-67136240 None:intergenic
TTTAATTTGATGTACAATTA+TGG 0.182457 7_1:+67136143 Msa1032190:three_prime_UTR
AACCTTGAAACCTAGTACTA+TGG 0.185577 7_1:+67131784 Msa1032190:CDS
TTTACAAGTGATCCATTAAA+TGG 0.185731 7_1:-67136066 None:intergenic
TGAATCAAATAGTAGTTATT+TGG 0.198310 7_1:-67131923 None:intergenic
ATCAAGTAAGCAAAAGTAAT+TGG 0.205146 7_1:-67131842 None:intergenic
TGGTTGGATTTAGAGATTTA+AGG 0.213982 7_1:+67133127 Msa1032190:CDS
AATATTCATGTTTACCTTCA+TGG 0.222224 7_1:+67131703 Msa1032190:CDS
TATTTGATTCACATGGATTA+TGG 0.248998 7_1:+67131935 Msa1032190:CDS
CCAAATCAATATAGTCTCTT+TGG 0.256927 7_1:-67136193 None:intergenic
ACTTAAAGATTATAGGAAAA+TGG 0.276934 7_1:+67135585 Msa1032190:CDS
GTGATACTGTGAAGCTAAAA+AGG 0.282977 7_1:+67131879 Msa1032190:CDS
GACTAGTTCCTGTGCATGTT+TGG 0.291550 7_1:+67136301 Msa1032190:three_prime_UTR
CCTCTATAGGTTACAAGATT+AGG 0.307603 7_1:-67132049 None:intergenic
ATTTGAAGGGTTAGTCTTGT+AGG 0.337088 7_1:-67131758 None:intergenic
TTTGTTAAACAAAATCCTTA+TGG 0.342506 7_1:+67135816 Msa1032190:CDS
CCAAAGAGACTATATTGATT+TGG 0.346840 7_1:+67136193 Msa1032190:three_prime_UTR
ATTGGAAATGTTTGGATTGT+TGG 0.347542 7_1:+67132022 Msa1032190:CDS
AGAGACCTAGGATGTTGTTT+TGG 0.350611 7_1:-67135559 None:intergenic
TTAGTCAAATTGGAAATGTT+TGG 0.350922 7_1:+67132014 Msa1032190:CDS
CTGTTTACCTACACTGCATT+TGG 0.352059 7_1:-67135852 None:intergenic
TTAAACTATCAATACTGTTC+TGG 0.353609 7_1:+67133151 Msa1032190:CDS
ATTATCGTGTGAGTGGAATT+AGG 0.357657 7_1:-67131528 None:intergenic
ACATCTTTATGTTCTGCATC+TGG 0.364339 7_1:-67131962 None:intergenic
GGTTTGAGAACTGAGAATTA+TGG 0.376756 7_1:+67135754 Msa1032190:CDS
ACTGTTTGGAAATATCCTTC+TGG 0.379198 7_1:-67135463 None:intergenic
CTCTAGGACTTAAAGATTAT+AGG 0.380227 7_1:+67135578 Msa1032190:CDS
AAGCATAGTTGGTCCTCTAT+AGG 0.387489 7_1:-67132062 None:intergenic
TTAATTTGATGTACAATTAT+GGG 0.398400 7_1:+67136144 Msa1032190:three_prime_UTR
ATGATCTTCACTACATTACT+TGG 0.398716 7_1:+67135527 Msa1032190:CDS
TGTTCAGAAGTTGCGTGTTA+TGG 0.402003 7_1:+67133107 Msa1032190:intron
CCTAATCTTGTAACCTATAG+AGG 0.412622 7_1:+67132049 Msa1032190:CDS
AGAAGATGTTGTGTAAATAA+AGG 0.414732 7_1:-67131606 None:intergenic
TAGCTTCACAGTATCACCTT+TGG 0.422084 7_1:-67131873 None:intergenic
AGCCTTCTTGAGCCAGGACC+AGG 0.423280 7_1:-67135787 None:intergenic
TGCTTCTTAAGACATGTCAT+TGG 0.425258 7_1:+67132110 Msa1032190:CDS
TTAAGACATGTCATTGGGAT+TGG 0.429628 7_1:+67132116 Msa1032190:CDS
TTGGAAATGTTTGGATTGTT+GGG 0.430567 7_1:+67132023 Msa1032190:CDS
TTTGGAGGGTGGTGTTCTCA+AGG 0.438791 7_1:+67135709 Msa1032190:CDS
AGTAATTGGGTATGTTATGT+TGG 0.441095 7_1:-67131828 None:intergenic
GTTTCAAGGTTGAAATTTGA+AGG 0.446405 7_1:-67131772 None:intergenic
CTTGAGACCTTTGATTAAGC+TGG 0.446794 7_1:+67135977 Msa1032190:three_prime_UTR
GGTTTGCTTAAACCTGGTCC+TGG 0.447605 7_1:+67135775 Msa1032190:CDS
GATGATAATCCATGTACATA+TGG 0.448958 7_1:+67133996 Msa1032190:CDS
GCTTCTTAAGACATGTCATT+GGG 0.449821 7_1:+67132111 Msa1032190:CDS
TCCATGTGATCCTACAAACT+TGG 0.452358 7_1:-67135905 None:intergenic
AACAATTTGTTCGTTAGTCA+TGG 0.452470 7_1:+67133197 Msa1032190:CDS
AAATAATTGCATCAGCCATC+AGG 0.453374 7_1:-67134073 None:intergenic
GTCCATAGTACTAGGTTTCA+AGG 0.455218 7_1:-67131786 None:intergenic
GAGATCATTATTGTCTCGTC+AGG 0.456395 7_1:+67136002 Msa1032190:three_prime_UTR
TTGAAGTAGTCCATAGTACT+AGG 0.458324 7_1:-67131794 None:intergenic
TCAAGTAAGCAAAAGTAATT+GGG 0.460700 7_1:-67131841 None:intergenic
GAAGATGTTGTGTAAATAAA+GGG 0.464010 7_1:-67131605 None:intergenic
TTTGAAGGGTTAGTCTTGTA+GGG 0.470078 7_1:-67131757 None:intergenic
CAGAAATCTTCAAATAAACT+TGG 0.471266 7_1:-67136279 None:intergenic
TCCATTAAATGGAAATCAAA+TGG 0.472815 7_1:-67136055 None:intergenic
GTGAGTTGCATATTACTGTT+TGG 0.477123 7_1:-67135477 None:intergenic
CTGAGTATTGCATCGTGGGA+TGG 0.479349 7_1:+67135389 Msa1032190:CDS
TAGTGCTTCTGATTATCCCT+TGG 0.482480 7_1:+67132150 Msa1032190:CDS
TATCCCTTGGTTACACAAGA+TGG 0.484610 7_1:+67132163 Msa1032190:CDS
AGAGTAGTTGCAAGCATAGT+TGG 0.496093 7_1:-67132073 None:intergenic
TGAGTATTGCATCGTGGGAT+GGG 0.496769 7_1:+67135390 Msa1032190:CDS
AAACAACATCCTAGGTCTCT+AGG 0.497584 7_1:+67135562 Msa1032190:CDS
AAAGGTCTCAAGTTCGAAAA+CGG 0.505321 7_1:-67135966 None:intergenic
AATTATGGTTTGCTTAAACC+TGG 0.512607 7_1:+67135769 Msa1032190:CDS
TTTCAAGGTTGAAATTTGAA+GGG 0.514600 7_1:-67131771 None:intergenic
TAGTAGAGGAGTAGAGTCCT+TGG 0.516432 7_1:-67135421 None:intergenic
AGACAAAGTTAGTGTAGTAG+AGG 0.518512 7_1:-67135435 None:intergenic
CAAATTCTAAACAATCTGTA+AGG 0.519971 7_1:+67136241 Msa1032190:three_prime_UTR
TAATATTGAGGTTACCATGA+AGG 0.531200 7_1:-67131717 None:intergenic
TGGGAGAGAGAATGAGGTGG+TGG 0.531769 7_1:-67131630 None:intergenic
CTTGGTTACACAAGATGGTA+TGG 0.532748 7_1:+67132168 Msa1032190:CDS
ATTTGTTCGTTAGTCATGGA+AGG 0.535670 7_1:+67133201 Msa1032190:CDS
CCCAAGTTTGTAGGATCACA+TGG 0.535814 7_1:+67135904 Msa1032190:three_prime_UTR
TAGTGGATGCACATGCCTGA+TGG 0.538003 7_1:+67134058 Msa1032190:CDS
GGAAAGAACAAAGCATGCTC+AGG 0.540430 7_1:+67135733 Msa1032190:CDS
ATCCTCCAAAACAACATCCT+AGG 0.540904 7_1:+67135554 Msa1032190:CDS
AAATTGTGGGAGAGAGAATG+AGG 0.542769 7_1:-67131636 None:intergenic
ATCACACCGCCCAAGTTTGT+AGG 0.543565 7_1:+67135895 Msa1032190:three_prime_UTR
ATTTATATCCAAACATGCAC+AGG 0.546616 7_1:-67136309 None:intergenic
ATTTGATGTACAATTATGGG+TGG 0.547129 7_1:+67136147 Msa1032190:three_prime_UTR
CAGAAGTTGCGTGTTATGGT+TGG 0.551572 7_1:+67133111 Msa1032190:intron
TGTGGCAGAATATGTTGCTA+AGG 0.561420 7_1:+67131982 Msa1032190:CDS
CACAAAATTCAGGTTCAGCA+TGG 0.562912 7_1:+67135344 Msa1032190:intron
CCATGTGATCCTACAAACTT+GGG 0.563431 7_1:-67135904 None:intergenic
TCTTTAAGTCCTAGAGACCT+AGG 0.565974 7_1:-67135571 None:intergenic
AATGTAGTGAAGATCATGGT+TGG 0.568469 7_1:-67135521 None:intergenic
TAACTACTATTTGATTCACA+TGG 0.570348 7_1:+67131928 Msa1032190:CDS
ATGTTCCTCTACAAGTATGA+AGG 0.572897 7_1:-67134132 None:intergenic
ATCTCAACCAGCTTAATCAA+AGG 0.576188 7_1:-67135984 None:intergenic
TGATCTTCACTACATTACTT+GGG 0.576959 7_1:+67135528 Msa1032190:CDS
TACTTGATCTCTGCATCCAA+AGG 0.577475 7_1:+67131857 Msa1032190:CDS
TGCAACTACTCTTCATGCCA+TGG 0.578383 7_1:+67132084 Msa1032190:CDS
TGTGCAGTGTCTATTTCTAG+TGG 0.582465 7_1:+67134041 Msa1032190:CDS
TTTGATGTACAATTATGGGT+GGG 0.588091 7_1:+67136148 Msa1032190:three_prime_UTR
AAGTAATGTAGTGAAGATCA+TGG 0.594031 7_1:-67135525 None:intergenic
TGAGGATATTATCGTGTGAG+TGG 0.595372 7_1:-67131535 None:intergenic
AACCTGGTCCTGGCTCAAGA+AGG 0.597108 7_1:+67135785 Msa1032190:CDS
TCACCATCACCATATGTACA+TGG 0.599773 7_1:-67134005 None:intergenic
GTGAAGATCATGGTTGGCAG+TGG 0.602943 7_1:-67135515 None:intergenic
ACGTGCCTTCATACTTGTAG+AGG 0.604965 7_1:+67134127 Msa1032190:CDS
AACTTTGTCTCATCACCAGA+AGG 0.613473 7_1:+67135448 Msa1032190:CDS
CATACCATCTTGTGTAACCA+AGG 0.634114 7_1:-67132167 None:intergenic
TGTACATATGGTGATGGTGA+TGG 0.634398 7_1:+67134008 Msa1032190:CDS
TGGGATGGGAAAATCTGCCA+AGG 0.635256 7_1:+67135404 Msa1032190:CDS
GGAGGGTGGTGTTCTCAAGG+TGG 0.638629 7_1:+67135712 Msa1032190:CDS
AATCCATGTACATATGGTGA+TGG 0.638884 7_1:+67134002 Msa1032190:CDS
AGATGCAGAACATAAAGATG+TGG 0.654179 7_1:+67131964 Msa1032190:CDS
TGTCTTAAGAAGCATTGCCA+TGG 0.655282 7_1:-67132101 None:intergenic
TTCATACTTGTAGAGGAACA+TGG 0.659977 7_1:+67134134 Msa1032190:CDS
ATACCATCTTGTGTAACCAA+GGG 0.666206 7_1:-67132166 None:intergenic
TGTGATCCTACAAACTTGGG+CGG 0.702466 7_1:-67135901 None:intergenic
TTGTGGGAGAGAGAATGAGG+TGG 0.745027 7_1:-67131633 None:intergenic
AAGTTTGTAGGATCACATGG+AGG 0.782664 7_1:+67135907 Msa1032190:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTAATTGAATAGAAAAT+TGG + chr7_1:67133436-67133455 Msa1032190:intron 10.0%
!! TATTAATTGAATAGAAAATT+GGG + chr7_1:67133437-67133456 Msa1032190:intron 10.0%
!!! AAAGAATTTTTTTTATAGTT+AGG + chr7_1:67133619-67133638 Msa1032190:intron 10.0%
!!! TCATTATAATTTTTTAATAG+TGG + chr7_1:67133710-67133729 Msa1032190:intron 10.0%
!! TAAATATTATCATATATAAG+TGG + chr7_1:67134471-67134490 Msa1032190:intron 10.0%
!! ATATATATATATCAAGAATT+TGG - chr7_1:67134559-67134578 None:intergenic 10.0%
!!! TGTTAATGATTGATTTAAAT+TGG + chr7_1:67132407-67132426 Msa1032190:intron 15.0%
!!! TTTTTTGCTAAGTAATTTAA+GGG + chr7_1:67132867-67132886 Msa1032190:intron 15.0%
!! TGATTCTATAAAATATGATT+AGG + chr7_1:67132909-67132928 Msa1032190:intron 15.0%
!! GATTCTATAAAATATGATTA+GGG + chr7_1:67132910-67132929 Msa1032190:intron 15.0%
!! AAATAGATAAATACTAATCT+TGG - chr7_1:67133344-67133363 None:intergenic 15.0%
!! AATATAACCTTCAAATTATT+AGG + chr7_1:67133464-67133483 Msa1032190:intron 15.0%
!! AAATAATCCTAATAATTTGA+AGG - chr7_1:67133474-67133493 None:intergenic 15.0%
!! AAAAATTTATGTAATGTACT+GGG - chr7_1:67133763-67133782 None:intergenic 15.0%
!! AAAAAATTTATGTAATGTAC+TGG - chr7_1:67133764-67133783 None:intergenic 15.0%
!! TGAATATTTAATAAGTTTGT+AGG - chr7_1:67133888-67133907 None:intergenic 15.0%
!! ATTATGCAAAGTTAATAATT+TGG - chr7_1:67134345-67134364 None:intergenic 15.0%
!! AAAGTTTGAATCAAAATAAT+TGG - chr7_1:67134522-67134541 None:intergenic 15.0%
!! TTATAAAAATCATTATGTGT+GGG - chr7_1:67134842-67134861 None:intergenic 15.0%
!! TTTATAAAAATCATTATGTG+TGG - chr7_1:67134843-67134862 None:intergenic 15.0%
!!! ATGATTTTTATAAAAATGTG+AGG + chr7_1:67134849-67134868 Msa1032190:intron 15.0%
!!! TGATTTTTATAAAAATGTGA+GGG + chr7_1:67134850-67134869 Msa1032190:intron 15.0%
!!! AACAGTTTTTTGATATAAAT+CGG + chr7_1:67135870-67135889 Msa1032190:exon 15.0%
!! AAGACAATATACAAAAAATT+AGG + chr7_1:67136087-67136106 Msa1032190:three_prime_UTR 15.0%
!!! TTTAATTTGATGTACAATTA+TGG + chr7_1:67136143-67136162 Msa1032190:three_prime_UTR 15.0%
!!! TTAATTTGATGTACAATTAT+GGG + chr7_1:67136144-67136163 Msa1032190:three_prime_UTR 15.0%
!!! TTAATGATGCAAATTTTGTT+GGG - chr7_1:67131562-67131581 None:intergenic 20.0%
!! GAGAAAAAAGAATAATATTG+AGG - chr7_1:67131732-67131751 None:intergenic 20.0%
!! TGAATCAAATAGTAGTTATT+TGG - chr7_1:67131926-67131945 None:intergenic 20.0%
!! CAAATGTCATATAGTAATTA+AGG - chr7_1:67132201-67132220 None:intergenic 20.0%
!!! CTTTTTTGCTAAGTAATTTA+AGG + chr7_1:67132866-67132885 Msa1032190:intron 20.0%
!!! TTTTTGCTAAGTAATTTAAG+GGG + chr7_1:67132868-67132887 Msa1032190:intron 20.0%
!!! TCATATTTTATAGAATCACA+TGG - chr7_1:67132907-67132926 None:intergenic 20.0%
!!! TTTATTGTCATTTGGTTAAT+TGG + chr7_1:67132981-67133000 Msa1032190:intron 20.0%
!! GAATTGATCAAAACAATATA+AGG - chr7_1:67133579-67133598 None:intergenic 20.0%
!! AAATAAATCTCATTTATCTG+CGG - chr7_1:67133861-67133880 None:intergenic 20.0%
!! CATAAACAAAAGAAAACAAA+GGG - chr7_1:67134216-67134235 None:intergenic 20.0%
!! ACATAAACAAAAGAAAACAA+AGG - chr7_1:67134217-67134236 None:intergenic 20.0%
!!! TTCTTTTGTTTATGTTTACT+AGG + chr7_1:67134222-67134241 Msa1032190:intron 20.0%
!!! CAGAATAAAAAAAACTTTTC+TGG + chr7_1:67134264-67134283 Msa1032190:intron 20.0%
!! TAATTTCTTACTCTTAACAA+AGG + chr7_1:67134361-67134380 Msa1032190:intron 20.0%
!! ACTTAAAGATTATAGGAAAA+TGG + chr7_1:67135585-67135604 Msa1032190:CDS 20.0%
!! TTTGTTAAACAAAATCCTTA+TGG + chr7_1:67135816-67135835 Msa1032190:CDS 20.0%
!!! ACAGTTTTTTGATATAAATC+GGG + chr7_1:67135871-67135890 Msa1032190:three_prime_UTR 20.0%
!! TAATGATGCAAATTTTGTTG+GGG - chr7_1:67131561-67131580 None:intergenic 25.0%
!! GTTAATGATGCAAATTTTGT+TGG - chr7_1:67131563-67131582 None:intergenic 25.0%
! GAAGATGTTGTGTAAATAAA+GGG - chr7_1:67131608-67131627 None:intergenic 25.0%
! AGAAGATGTTGTGTAAATAA+AGG - chr7_1:67131609-67131628 None:intergenic 25.0%
! TAAAGAGAGAGAAAAATTGT+GGG - chr7_1:67131652-67131671 None:intergenic 25.0%
! ATAAAGAGAGAGAAAAATTG+TGG - chr7_1:67131653-67131672 None:intergenic 25.0%
!! TTTTGCAATTTTCTCTCAAA+TGG + chr7_1:67131673-67131692 Msa1032190:exon 25.0%
! AATATTCATGTTTACCTTCA+TGG + chr7_1:67131703-67131722 Msa1032190:CDS 25.0%
! TTTCAAGGTTGAAATTTGAA+GGG - chr7_1:67131774-67131793 None:intergenic 25.0%
! TCAAGTAAGCAAAAGTAATT+GGG - chr7_1:67131844-67131863 None:intergenic 25.0%
! ATCAAGTAAGCAAAAGTAAT+TGG - chr7_1:67131845-67131864 None:intergenic 25.0%
! TAACTACTATTTGATTCACA+TGG + chr7_1:67131928-67131947 Msa1032190:CDS 25.0%
!! TATTTGATTCACATGGATTA+TGG + chr7_1:67131935-67131954 Msa1032190:CDS 25.0%
! TTTCCAATTTGACTAAAAAC+AGG - chr7_1:67132010-67132029 None:intergenic 25.0%
! TTAGTCAAATTGGAAATGTT+TGG + chr7_1:67132014-67132033 Msa1032190:CDS 25.0%
! CTAGATTGCAATTATATACA+AGG + chr7_1:67132290-67132309 Msa1032190:intron 25.0%
!!! TTGCTTATGCATTGTTTTAT+TGG + chr7_1:67132344-67132363 Msa1032190:intron 25.0%
! TTGTGAAATGATCTTAACTA+TGG + chr7_1:67132369-67132388 Msa1032190:intron 25.0%
! CAGATCTGAAAATTCAAAAA+AGG - chr7_1:67132439-67132458 None:intergenic 25.0%
! TGTATGAAATTAATATCCCT+TGG - chr7_1:67132483-67132502 None:intergenic 25.0%
! ACCAAATATCTGATTTATTG+AGG - chr7_1:67132686-67132705 None:intergenic 25.0%
! TCAATAAATCAGATATTTGG+TGG + chr7_1:67132685-67132704 Msa1032190:intron 25.0%
! GTGTATAGTTTAAAAGATGT+TGG - chr7_1:67132732-67132751 None:intergenic 25.0%
!! ACATCTTTTAAACTATACAC+AGG + chr7_1:67132732-67132751 Msa1032190:intron 25.0%
! AAATAAGCTAAGAGATTGAA+GGG - chr7_1:67132766-67132785 None:intergenic 25.0%
! AAAATAAGCTAAGAGATTGA+AGG - chr7_1:67132767-67132786 None:intergenic 25.0%
!! TTCAATCTCTTAGCTTATTT+TGG + chr7_1:67132766-67132785 Msa1032190:intron 25.0%
! AATTTAAGGGGATATATATG+TGG + chr7_1:67132880-67132899 Msa1032190:intron 25.0%
! TGTCATAGTTTATTGTCATT+TGG + chr7_1:67132973-67132992 Msa1032190:intron 25.0%
! ATGTCGAATATGTTCTAATA+AGG - chr7_1:67133014-67133033 None:intergenic 25.0%
! TTAAACTATCAATACTGTTC+TGG + chr7_1:67133151-67133170 Msa1032190:CDS 25.0%
! AGATAAATACTAATCTTGGT+GGG - chr7_1:67133340-67133359 None:intergenic 25.0%
! TAGATAAATACTAATCTTGG+TGG - chr7_1:67133341-67133360 None:intergenic 25.0%
!! GATGAATTTTATGGAAAATG+TGG + chr7_1:67133380-67133399 Msa1032190:intron 25.0%
! TTAGAGATTGAGTACTTATT+AGG - chr7_1:67133738-67133757 None:intergenic 25.0%
! GTAATGATATAGAGATTGAT+AGG - chr7_1:67133806-67133825 None:intergenic 25.0%
! TTATTATGTACCATCATTGT+GGG - chr7_1:67133919-67133938 None:intergenic 25.0%
!! CATGTGTATTTTCCAATTTA+AGG - chr7_1:67133954-67133973 None:intergenic 25.0%
! AAAAGAAAACAAAGGGAAAA+AGG - chr7_1:67134209-67134228 None:intergenic 25.0%
!!! CATATATAAGTGGTGTTATA+CGG + chr7_1:67134481-67134500 Msa1032190:intron 25.0%
!! ATCAAAATAATTGGTTCTTG+TGG - chr7_1:67134513-67134532 None:intergenic 25.0%
! AAGTATTATTAGACAAGTAG+TGG + chr7_1:67134655-67134674 Msa1032190:intron 25.0%
! AGTATTATTAGACAAGTAGT+GGG + chr7_1:67134656-67134675 Msa1032190:intron 25.0%
! GATCAATATTCACAAAATTC+AGG + chr7_1:67135334-67135353 Msa1032190:intron 25.0%
!! ACCATTTGATTTCCATTTAA+TGG + chr7_1:67136054-67136073 Msa1032190:three_prime_UTR 25.0%
! TCCATTAAATGGAAATCAAA+TGG - chr7_1:67136058-67136077 None:intergenic 25.0%
! TTTACAAGTGATCCATTAAA+TGG - chr7_1:67136069-67136088 None:intergenic 25.0%
!!! TAGGTTGAAACAGTTTTTTT+TGG + chr7_1:67136106-67136125 Msa1032190:three_prime_UTR 25.0%
!! CTTACAGATTGTTTAGAATT+TGG - chr7_1:67136243-67136262 None:intergenic 25.0%
! CAAATTCTAAACAATCTGTA+AGG + chr7_1:67136241-67136260 Msa1032190:three_prime_UTR 25.0%
! CAGAAATCTTCAAATAAACT+TGG - chr7_1:67136282-67136301 None:intergenic 25.0%
! TGAGTGTGTTGTATTTTCAA+TGG - chr7_1:67131585-67131604 None:intergenic 30.0%
TAATATTGAGGTTACCATGA+AGG - chr7_1:67131720-67131739 None:intergenic 30.0%
GTTTCAAGGTTGAAATTTGA+AGG - chr7_1:67131775-67131794 None:intergenic 30.0%
AGTAATTGGGTATGTTATGT+TGG - chr7_1:67131831-67131850 None:intergenic 30.0%
!!! GATCCTGTTTTTAGTCAAAT+TGG + chr7_1:67132004-67132023 Msa1032190:CDS 30.0%
ATTGGAAATGTTTGGATTGT+TGG + chr7_1:67132022-67132041 Msa1032190:CDS 30.0%
TTGGAAATGTTTGGATTGTT+GGG + chr7_1:67132023-67132042 Msa1032190:CDS 30.0%
!! ACCAATTTTAGCAATAAGAG+AGG + chr7_1:67132627-67132646 Msa1032190:intron 30.0%
!! CCAATTTTAGCAATAAGAGA+GGG + chr7_1:67132628-67132647 Msa1032190:intron 30.0%
GCCTCAATAAATCAGATATT+TGG + chr7_1:67132682-67132701 Msa1032190:intron 30.0%
! ATGTATTTTGTGACAACTCA+TGG - chr7_1:67132939-67132958 None:intergenic 30.0%
ATGAGTTGTCACAAAATACA+TGG + chr7_1:67132938-67132957 Msa1032190:intron 30.0%
ATATTCGACATCTTGTCTAT+TGG + chr7_1:67133023-67133042 Msa1032190:intron 30.0%
TGGTTGGATTTAGAGATTTA+AGG + chr7_1:67133127-67133146 Msa1032190:CDS 30.0%
! AACAATTTGTTCGTTAGTCA+TGG + chr7_1:67133197-67133216 Msa1032190:CDS 30.0%
AGTCATGGAAGGTAATTTAA+TGG + chr7_1:67133212-67133231 Msa1032190:intron 30.0%
AAGGTAATTTAATGGTAGCT+AGG + chr7_1:67133220-67133239 Msa1032190:intron 30.0%
TTCCATAAAATTCATCATGC+AGG - chr7_1:67133376-67133395 None:intergenic 30.0%
! ATTTTATGGAAAATGTGGTG+TGG + chr7_1:67133385-67133404 Msa1032190:intron 30.0%
! TTTTATGGAAAATGTGGTGT+GGG + chr7_1:67133386-67133405 Msa1032190:intron 30.0%
TATTTCCCAAGAAAATCGAA+AGG + chr7_1:67133489-67133508 Msa1032190:intron 30.0%
TGATCAATTCTGTCCTTATA+TGG + chr7_1:67133589-67133608 Msa1032190:intron 30.0%
GATCAATTCTGTCCTTATAT+GGG + chr7_1:67133590-67133609 Msa1032190:intron 30.0%
ATCAATTCTGTCCTTATATG+GGG + chr7_1:67133591-67133610 Msa1032190:intron 30.0%
TTCTTTATTCTCCCCATATA+AGG - chr7_1:67133605-67133624 None:intergenic 30.0%
TATTATGTACCATCATTGTG+GGG - chr7_1:67133918-67133937 None:intergenic 30.0%
CTTATTATGTACCATCATTG+TGG - chr7_1:67133920-67133939 None:intergenic 30.0%
! GTGTATTTTCCAATTTAAGG+AGG - chr7_1:67133951-67133970 None:intergenic 30.0%
GATGATAATCCATGTACATA+TGG + chr7_1:67133996-67134015 Msa1032190:CDS 30.0%
GAACATGGTACATACATAAA+CGG + chr7_1:67134149-67134168 Msa1032190:intron 30.0%
TTTAAACTCGAAACCAGTAA+AGG + chr7_1:67134311-67134330 Msa1032190:intron 30.0%
! TTTGGAATAGATTCCTTTAC+TGG - chr7_1:67134327-67134346 None:intergenic 30.0%
!!! TTTTGAAGTATTGAGTCAAG+TGG + chr7_1:67134410-67134429 Msa1032190:intron 30.0%
ATAATACTTACAACACACGT+TGG - chr7_1:67134644-67134663 None:intergenic 30.0%
GTATTATTAGACAAGTAGTG+GGG + chr7_1:67134657-67134676 Msa1032190:intron 30.0%
!! TAATATGTTCCCAGTTTTGA+TGG - chr7_1:67134709-67134728 None:intergenic 30.0%
TGGGAACATATTACATGATA+AGG + chr7_1:67134716-67134735 Msa1032190:intron 30.0%
GGGAACATATTACATGATAA+GGG + chr7_1:67134717-67134736 Msa1032190:intron 30.0%
GGAACATATTACATGATAAG+GGG + chr7_1:67134718-67134737 Msa1032190:intron 30.0%
AAAAATCATTATGTGTGGGA+GGG - chr7_1:67134838-67134857 None:intergenic 30.0%
TAAAAATCATTATGTGTGGG+AGG - chr7_1:67134839-67134858 None:intergenic 30.0%
!! TATGTTAGTCTTAGAAATCG+TGG + chr7_1:67134895-67134914 Msa1032190:intron 30.0%
AAGTAATGTAGTGAAGATCA+TGG - chr7_1:67135528-67135547 None:intergenic 30.0%
ATGATCTTCACTACATTACT+TGG + chr7_1:67135527-67135546 Msa1032190:CDS 30.0%
TGATCTTCACTACATTACTT+GGG + chr7_1:67135528-67135547 Msa1032190:CDS 30.0%
!! CTCTAGGACTTAAAGATTAT+AGG + chr7_1:67135578-67135597 Msa1032190:CDS 30.0%
!! TTGATAGAGATCTTTTGAAG+AGG + chr7_1:67135668-67135687 Msa1032190:CDS 30.0%
!! AGATCTTTTGAAGAGGTATA+AGG + chr7_1:67135675-67135694 Msa1032190:CDS 30.0%
!! GATCTTTTGAAGAGGTATAA+GGG + chr7_1:67135676-67135695 Msa1032190:CDS 30.0%
!! ATCTTTTGAAGAGGTATAAG+GGG + chr7_1:67135677-67135696 Msa1032190:CDS 30.0%
!! AATTATGGTTTGCTTAAACC+TGG + chr7_1:67135769-67135788 Msa1032190:CDS 30.0%
GGCGAAAAAATTTATCCATA+AGG - chr7_1:67135834-67135853 None:intergenic 30.0%
!!! AACACTTTTTTTGCAAGTGT+AGG + chr7_1:67136029-67136048 Msa1032190:three_prime_UTR 30.0%
ATTTGATGTACAATTATGGG+TGG + chr7_1:67136147-67136166 Msa1032190:three_prime_UTR 30.0%
TTTGATGTACAATTATGGGT+GGG + chr7_1:67136148-67136167 Msa1032190:three_prime_UTR 30.0%
CCAAATCAATATAGTCTCTT+TGG - chr7_1:67136196-67136215 None:intergenic 30.0%
! CCAAAGAGACTATATTGATT+TGG + chr7_1:67136193-67136212 Msa1032190:three_prime_UTR 30.0%
ATTTATATCCAAACATGCAC+AGG - chr7_1:67136312-67136331 None:intergenic 30.0%
ATTATCGTGTGAGTGGAATT+AGG - chr7_1:67131531-67131550 None:intergenic 35.0%
!! TTTGAAGGGTTAGTCTTGTA+GGG - chr7_1:67131760-67131779 None:intergenic 35.0%
!! ATTTGAAGGGTTAGTCTTGT+AGG - chr7_1:67131761-67131780 None:intergenic 35.0%
AACCTTGAAACCTAGTACTA+TGG + chr7_1:67131784-67131803 Msa1032190:CDS 35.0%
TTGAAGTAGTCCATAGTACT+AGG - chr7_1:67131797-67131816 None:intergenic 35.0%
!!! GGTATGTTATGTTGGCTTTT+AGG - chr7_1:67131823-67131842 None:intergenic 35.0%
GTGATACTGTGAAGCTAAAA+AGG + chr7_1:67131879-67131898 Msa1032190:CDS 35.0%
ACATCTTTATGTTCTGCATC+TGG - chr7_1:67131965-67131984 None:intergenic 35.0%
AGATGCAGAACATAAAGATG+TGG + chr7_1:67131964-67131983 Msa1032190:CDS 35.0%
CCTCTATAGGTTACAAGATT+AGG - chr7_1:67132052-67132071 None:intergenic 35.0%
CCTAATCTTGTAACCTATAG+AGG + chr7_1:67132049-67132068 Msa1032190:CDS 35.0%
TGCTTCTTAAGACATGTCAT+TGG + chr7_1:67132110-67132129 Msa1032190:CDS 35.0%
GCTTCTTAAGACATGTCATT+GGG + chr7_1:67132111-67132130 Msa1032190:CDS 35.0%
TTAAGACATGTCATTGGGAT+TGG + chr7_1:67132116-67132135 Msa1032190:CDS 35.0%
ATACCATCTTGTGTAACCAA+GGG - chr7_1:67132169-67132188 None:intergenic 35.0%
!!! TCTGATCCAAGTTTTTTCTG+AGG + chr7_1:67132455-67132474 Msa1032190:intron 35.0%
ATACAACATAGTAGTCGCTT+GGG + chr7_1:67132498-67132517 Msa1032190:intron 35.0%
CCCTCTCTTATTGCTAAAAT+TGG - chr7_1:67132631-67132650 None:intergenic 35.0%
GAAGCCAATGATTATAGATC+CGG + chr7_1:67132650-67132669 Msa1032190:intron 35.0%
AAGCCAATGATTATAGATCC+GGG + chr7_1:67132651-67132670 Msa1032190:intron 35.0%
TTATTGAGGCTATAAAGTCC+CGG - chr7_1:67132672-67132691 None:intergenic 35.0%
! TTTGGTGGATCATTAAGCAA+AGG + chr7_1:67132700-67132719 Msa1032190:intron 35.0%
GATAACATGCGTGTAATGAA+GGG - chr7_1:67132842-67132861 None:intergenic 35.0%
AGATAACATGCGTGTAATGA+AGG - chr7_1:67132843-67132862 None:intergenic 35.0%
ATTTGTTCGTTAGTCATGGA+AGG + chr7_1:67133201-67133220 Msa1032190:CDS 35.0%
GTAATTTAATGGTAGCTAGG+TGG + chr7_1:67133223-67133242 Msa1032190:intron 35.0%
GAGCATTCATGTGTATAATG+TGG + chr7_1:67133254-67133273 Msa1032190:intron 35.0%
! CTCCTGCATGATGAATTTTA+TGG + chr7_1:67133371-67133390 Msa1032190:intron 35.0%
! TCCTTCCTTTCGATTTTCTT+GGG - chr7_1:67133497-67133516 None:intergenic 35.0%
! ATCCTTCCTTTCGATTTTCT+TGG - chr7_1:67133498-67133517 None:intergenic 35.0%
AGAGATTGATAGGTGATTAG+TGG - chr7_1:67133796-67133815 None:intergenic 35.0%
!!! CAATTTTTTCCCCACAATGA+TGG + chr7_1:67133906-67133925 Msa1032190:intron 35.0%
GTATAAGTGCCTCCTTAAAT+TGG + chr7_1:67133939-67133958 Msa1032190:intron 35.0%
AATCCATGTACATATGGTGA+TGG + chr7_1:67134002-67134021 Msa1032190:CDS 35.0%
AAATAATTGCATCAGCCATC+AGG - chr7_1:67134076-67134095 None:intergenic 35.0%
ATGTTCCTCTACAAGTATGA+AGG - chr7_1:67134135-67134154 None:intergenic 35.0%
TTCATACTTGTAGAGGAACA+TGG + chr7_1:67134134-67134153 Msa1032190:CDS 35.0%
TGATAAGGGGAAACAAAAGA+AGG + chr7_1:67134731-67134750 Msa1032190:intron 35.0%
!! TTAGTCTTAGAAATCGTGGT+TGG + chr7_1:67134899-67134918 Msa1032190:intron 35.0%
! TAGTCTTAGAAATCGTGGTT+GGG + chr7_1:67134900-67134919 Msa1032190:intron 35.0%
!! GATTTCTAAGATGGTATCAG+AGG - chr7_1:67135101-67135120 None:intergenic 35.0%
ACCATCTTAGAAATCGTGAT+TGG + chr7_1:67135106-67135125 Msa1032190:intron 35.0%
CCATCTTAGAAATCGTGATT+GGG + chr7_1:67135107-67135126 Msa1032190:intron 35.0%
AAACTGTTAAGAGTCCACAT+CGG - chr7_1:67135184-67135203 None:intergenic 35.0%
AATAGTCTATTCCATTGCCT+TGG - chr7_1:67135220-67135239 None:intergenic 35.0%
! CATTGCAGATGCAATTTTAG+AGG - chr7_1:67135287-67135306 None:intergenic 35.0%
!! ATTTTCTGAGTATTGCATCG+TGG + chr7_1:67135384-67135403 Msa1032190:CDS 35.0%
!! TTTTCTGAGTATTGCATCGT+GGG + chr7_1:67135385-67135404 Msa1032190:CDS 35.0%
AGACAAAGTTAGTGTAGTAG+AGG - chr7_1:67135438-67135457 None:intergenic 35.0%
ACTGTTTGGAAATATCCTTC+TGG - chr7_1:67135466-67135485 None:intergenic 35.0%
GTGAGTTGCATATTACTGTT+TGG - chr7_1:67135480-67135499 None:intergenic 35.0%
AATGTAGTGAAGATCATGGT+TGG - chr7_1:67135524-67135543 None:intergenic 35.0%
!! TGAATTTTCTAGCGAAAGGA+CGG - chr7_1:67135621-67135640 None:intergenic 35.0%
!! CTCTTGAATTTTCTAGCGAA+AGG - chr7_1:67135625-67135644 None:intergenic 35.0%
!! TCTTTTGAAGAGGTATAAGG+GGG + chr7_1:67135678-67135697 Msa1032190:CDS 35.0%
! TATAAGGGGGGATTTTCTTT+TGG + chr7_1:67135691-67135710 Msa1032190:CDS 35.0%
GGTTTGAGAACTGAGAATTA+TGG + chr7_1:67135754-67135773 Msa1032190:CDS 35.0%
AAAGGTCTCAAGTTCGAAAA+CGG - chr7_1:67135969-67135988 None:intergenic 35.0%
ATCTCAACCAGCTTAATCAA+AGG - chr7_1:67135987-67136006 None:intergenic 35.0%
TGAGGATATTATCGTGTGAG+TGG - chr7_1:67131538-67131557 None:intergenic 40.0%
! ATGCAAATTTTGTTGGGGTG+AGG - chr7_1:67131556-67131575 None:intergenic 40.0%
AAATTGTGGGAGAGAGAATG+AGG - chr7_1:67131639-67131658 None:intergenic 40.0%
GTCCATAGTACTAGGTTTCA+AGG - chr7_1:67131789-67131808 None:intergenic 40.0%
TACTTGATCTCTGCATCCAA+AGG + chr7_1:67131857-67131876 Msa1032190:CDS 40.0%
TAGCTTCACAGTATCACCTT+TGG - chr7_1:67131876-67131895 None:intergenic 40.0%
TGTGGCAGAATATGTTGCTA+AGG + chr7_1:67131982-67132001 Msa1032190:CDS 40.0%
AAGCATAGTTGGTCCTCTAT+AGG - chr7_1:67132065-67132084 None:intergenic 40.0%
AGAGTAGTTGCAAGCATAGT+TGG - chr7_1:67132076-67132095 None:intergenic 40.0%
!! TGTCTTAAGAAGCATTGCCA+TGG - chr7_1:67132104-67132123 None:intergenic 40.0%
TAGTGCTTCTGATTATCCCT+TGG + chr7_1:67132150-67132169 Msa1032190:CDS 40.0%
TATCCCTTGGTTACACAAGA+TGG + chr7_1:67132163-67132182 Msa1032190:CDS 40.0%
CATACCATCTTGTGTAACCA+AGG - chr7_1:67132170-67132189 None:intergenic 40.0%
CTTGGTTACACAAGATGGTA+TGG + chr7_1:67132168-67132187 Msa1032190:CDS 40.0%
TTGGCACCTCAGAAAAAACT+TGG - chr7_1:67132464-67132483 None:intergenic 40.0%
!!! AAGTTTTTTCTGAGGTGCCA+AGG + chr7_1:67132463-67132482 Msa1032190:intron 40.0%
!!! AGTTTTTTCTGAGGTGCCAA+GGG + chr7_1:67132464-67132483 Msa1032190:intron 40.0%
CATACAACATAGTAGTCGCT+TGG + chr7_1:67132497-67132516 Msa1032190:intron 40.0%
AGTCCCGGATCTATAATCAT+TGG - chr7_1:67132657-67132676 None:intergenic 40.0%
TGTTCAGAAGTTGCGTGTTA+TGG + chr7_1:67133107-67133126 Msa1032190:intron 40.0%
! TACTAATCTTGGTGGGTAAG+AGG - chr7_1:67133333-67133352 None:intergenic 40.0%
TCCCAAGAAAATCGAAAGGA+AGG + chr7_1:67133493-67133512 Msa1032190:intron 40.0%
TCACCATCACCATATGTACA+TGG - chr7_1:67134008-67134027 None:intergenic 40.0%
!! TGTACATATGGTGATGGTGA+TGG + chr7_1:67134008-67134027 Msa1032190:CDS 40.0%
!! TGTGCAGTGTCTATTTCTAG+TGG + chr7_1:67134041-67134060 Msa1032190:CDS 40.0%
CAAAGGTTACTTGAGTCAAG+TGG + chr7_1:67134378-67134397 Msa1032190:intron 40.0%
!! AAGTATTGAGTCAAGTGGCT+TGG + chr7_1:67134415-67134434 Msa1032190:intron 40.0%
GGTGCAAAAAGAGGAACTTA+TGG + chr7_1:67134678-67134697 Msa1032190:intron 40.0%
! TATGGCTTGTCCATCAAAAC+TGG + chr7_1:67134696-67134715 Msa1032190:intron 40.0%
! ATGGCTTGTCCATCAAAACT+GGG + chr7_1:67134697-67134716 Msa1032190:intron 40.0%
AAGGGGAAACAAAAGAAGGT+TGG + chr7_1:67134735-67134754 Msa1032190:intron 40.0%
!! CAGTTTTGTGGGATTGTGTT+AGG - chr7_1:67134926-67134945 None:intergenic 40.0%
CTAACACAATCCCACAAAAC+TGG + chr7_1:67134924-67134943 Msa1032190:intron 40.0%
!! ACCTCACAAACCAGTTTTGT+GGG - chr7_1:67134937-67134956 None:intergenic 40.0%
! TACCTCACAAACCAGTTTTG+TGG - chr7_1:67134938-67134957 None:intergenic 40.0%
TGCTATCAGGTTTCTGCTAT+CGG - chr7_1:67135054-67135073 None:intergenic 40.0%
GAGGCTCTTCAAGATTCAAT+GGG - chr7_1:67135082-67135101 None:intergenic 40.0%
AGAGGCTCTTCAAGATTCAA+TGG - chr7_1:67135083-67135102 None:intergenic 40.0%
! CCCAATCACGATTTCTAAGA+TGG - chr7_1:67135110-67135129 None:intergenic 40.0%
! GTTTGCTTGATTTTGTGCCA+AGG + chr7_1:67135200-67135219 Msa1032190:intron 40.0%
! TTGATTTTGTGCCAAGGCAA+TGG + chr7_1:67135206-67135225 Msa1032190:intron 40.0%
! CACAAAATTCAGGTTCAGCA+TGG + chr7_1:67135344-67135363 Msa1032190:intron 40.0%
AACTTTGTCTCATCACCAGA+AGG + chr7_1:67135448-67135467 Msa1032190:CDS 40.0%
ATCCTCCAAAACAACATCCT+AGG + chr7_1:67135554-67135573 Msa1032190:CDS 40.0%
!! AGAGACCTAGGATGTTGTTT+TGG - chr7_1:67135562-67135581 None:intergenic 40.0%
AAACAACATCCTAGGTCTCT+AGG + chr7_1:67135562-67135581 Msa1032190:CDS 40.0%
TCTTTAAGTCCTAGAGACCT+AGG - chr7_1:67135574-67135593 None:intergenic 40.0%
!! CTTTTGAAGAGGTATAAGGG+GGG + chr7_1:67135679-67135698 Msa1032190:CDS 40.0%
! TTTTTCGCCAAATGCAGTGT+AGG + chr7_1:67135845-67135864 Msa1032190:CDS 40.0%
CTGTTTACCTACACTGCATT+TGG - chr7_1:67135855-67135874 None:intergenic 40.0%
CCATGTGATCCTACAAACTT+GGG - chr7_1:67135907-67135926 None:intergenic 40.0%
TCCATGTGATCCTACAAACT+TGG - chr7_1:67135908-67135927 None:intergenic 40.0%
AAGTTTGTAGGATCACATGG+AGG + chr7_1:67135907-67135926 Msa1032190:three_prime_UTR 40.0%
CTTGAGACCTTTGATTAAGC+TGG + chr7_1:67135977-67135996 Msa1032190:three_prime_UTR 40.0%
GAGATCATTATTGTCTCGTC+AGG + chr7_1:67136002-67136021 Msa1032190:three_prime_UTR 40.0%
TGCAACTACTCTTCATGCCA+TGG + chr7_1:67132084-67132103 Msa1032190:CDS 45.0%
AACATAGTAGTCGCTTGGGT+TGG + chr7_1:67132502-67132521 Msa1032190:intron 45.0%
!! CTTGGGTTGGAAATTGTGAG+TGG + chr7_1:67132515-67132534 Msa1032190:intron 45.0%
CGTGTAATGAAGGGAACAAG+AGG - chr7_1:67132833-67132852 None:intergenic 45.0%
CAGAAGTTGCGTGTTATGGT+TGG + chr7_1:67133111-67133130 Msa1032190:intron 45.0%
AGGCACTCAACTACACAGTT+AGG - chr7_1:67133295-67133314 None:intergenic 45.0%
! TAATCTTGGTGGGTAAGAGG+AGG - chr7_1:67133330-67133349 None:intergenic 45.0%
ACGTGCCTTCATACTTGTAG+AGG + chr7_1:67134127-67134146 Msa1032190:CDS 45.0%
! AAGTAGTGGGGTGCAAAAAG+AGG + chr7_1:67134669-67134688 Msa1032190:intron 45.0%
!! TCCCACAAAACTGGTTTGTG+AGG + chr7_1:67134933-67134952 Msa1032190:intron 45.0%
AAGAGTCTCACATCGGAAGT+GGG - chr7_1:67134970-67134989 None:intergenic 45.0%
TAAGAGTCTCACATCGGAAG+TGG - chr7_1:67134971-67134990 None:intergenic 45.0%
GGGTGTTAAGAGTCTCACAT+CGG - chr7_1:67134977-67134996 None:intergenic 45.0%
! GCTTGGTTCGTTGACATAAG+CGG + chr7_1:67135020-67135039 Msa1032190:intron 45.0%
GCTATCAGGTTTCTGCTATC+GGG - chr7_1:67135053-67135072 None:intergenic 45.0%
GATAGCAGAAACCTGATAGC+AGG + chr7_1:67135053-67135072 Msa1032190:intron 45.0%
!! ACCTCACAAGTCGGTTTTGT+GGG - chr7_1:67135144-67135163 None:intergenic 45.0%
!! ACAAAACCGACTTGTGAGGT+GGG + chr7_1:67135144-67135163 Msa1032190:intron 45.0%
! TGAGTATTGCATCGTGGGAT+GGG + chr7_1:67135390-67135409 Msa1032190:CDS 45.0%
TAGTAGAGGAGTAGAGTCCT+TGG - chr7_1:67135424-67135443 None:intergenic 45.0%
!!! GACCTAGGATGTTGTTTTGG+AGG - chr7_1:67135559-67135578 None:intergenic 45.0%
! AAGGGGGGATTTTCTTTTGG+AGG + chr7_1:67135694-67135713 Msa1032190:CDS 45.0%
! AGGGGGGATTTTCTTTTGGA+GGG + chr7_1:67135695-67135714 Msa1032190:CDS 45.0%
GGAAAGAACAAAGCATGCTC+AGG + chr7_1:67135733-67135752 Msa1032190:CDS 45.0%
!! TTTTTGAGCCTTCTTGAGCC+AGG - chr7_1:67135796-67135815 None:intergenic 45.0%
TGTGATCCTACAAACTTGGG+CGG - chr7_1:67135904-67135923 None:intergenic 45.0%
CCCAAGTTTGTAGGATCACA+TGG + chr7_1:67135904-67135923 Msa1032190:three_prime_UTR 45.0%
! GACTAGTTCCTGTGCATGTT+TGG + chr7_1:67136301-67136320 Msa1032190:three_prime_UTR 45.0%
TTGTGGGAGAGAGAATGAGG+TGG - chr7_1:67131636-67131655 None:intergenic 50.0%
AGAGGAGGTTGTGGGGTTTA+AGG - chr7_1:67133315-67133334 None:intergenic 50.0%
! TAGTGGATGCACATGCCTGA+TGG + chr7_1:67134058-67134077 Msa1032190:CDS 50.0%
AGAGTCTCACATCGGAAGTG+GGG - chr7_1:67134969-67134988 None:intergenic 50.0%
!! AATAGTGTTGGTCGTGAGGG+GGG - chr7_1:67134998-67135017 None:intergenic 50.0%
!! CAATAGTGTTGGTCGTGAGG+GGG - chr7_1:67134999-67135018 None:intergenic 50.0%
!! CCAATAGTGTTGGTCGTGAG+GGG - chr7_1:67135000-67135019 None:intergenic 50.0%
!! CCCAATAGTGTTGGTCGTGA+GGG - chr7_1:67135001-67135020 None:intergenic 50.0%
CCCTCACGACCAACACTATT+GGG + chr7_1:67134998-67135017 Msa1032190:intron 50.0%
ACGACCAACACTATTGGGCT+TGG + chr7_1:67135003-67135022 Msa1032190:intron 50.0%
CGAACCAAGCCCAATAGTGT+TGG - chr7_1:67135010-67135029 None:intergenic 50.0%
TGGTTCGTTGACATAAGCGG+TGG + chr7_1:67135023-67135042 Msa1032190:intron 50.0%
GGTTCGTTGACATAAGCGGT+GGG + chr7_1:67135024-67135043 Msa1032190:intron 50.0%
AGCAGAAACCTGATAGCAGG+TGG + chr7_1:67135056-67135075 Msa1032190:intron 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG - chr7_1:67135133-67135152 None:intergenic 50.0%
!! CCTCACAAGTCGGTTTTGTG+GGG - chr7_1:67135143-67135162 None:intergenic 50.0%
!! CACCTCACAAGTCGGTTTTG+TGG - chr7_1:67135145-67135164 None:intergenic 50.0%
!! CACAAAACCGACTTGTGAGG+TGG + chr7_1:67135143-67135162 Msa1032190:intron 50.0%
!! CAAAACCGACTTGTGAGGTG+GGG + chr7_1:67135145-67135164 Msa1032190:intron 50.0%
GATTGCCTCTACTTCCGATG+TGG + chr7_1:67135167-67135186 Msa1032190:intron 50.0%
AGAGTCCACATCGGAAGTAG+AGG - chr7_1:67135175-67135194 None:intergenic 50.0%
! CTGAGTATTGCATCGTGGGA+TGG + chr7_1:67135389-67135408 Msa1032190:CDS 50.0%
TGGGATGGGAAAATCTGCCA+AGG + chr7_1:67135404-67135423 Msa1032190:CDS 50.0%
GTGAAGATCATGGTTGGCAG+TGG - chr7_1:67135518-67135537 None:intergenic 50.0%
!! GGGGATTTTCTTTTGGAGGG+TGG + chr7_1:67135698-67135717 Msa1032190:CDS 50.0%
TTTGGAGGGTGGTGTTCTCA+AGG + chr7_1:67135709-67135728 Msa1032190:CDS 50.0%
! GGTTTGCTTAAACCTGGTCC+TGG + chr7_1:67135775-67135794 Msa1032190:CDS 50.0%
ATCACACCGCCCAAGTTTGT+AGG + chr7_1:67135895-67135914 Msa1032190:three_prime_UTR 50.0%
TGGGAGAGAGAATGAGGTGG+TGG - chr7_1:67131633-67131652 None:intergenic 55.0%
GTGGGTAAGAGGAGGTTGTG+GGG - chr7_1:67133322-67133341 None:intergenic 55.0%
GGTGGGTAAGAGGAGGTTGT+GGG - chr7_1:67133323-67133342 None:intergenic 55.0%
! TGGTGGGTAAGAGGAGGTTG+TGG - chr7_1:67133324-67133343 None:intergenic 55.0%
!! ATAGTGTTGGTCGTGAGGGG+GGG - chr7_1:67134997-67135016 None:intergenic 55.0%
CCCCTCACGACCAACACTAT+TGG + chr7_1:67134997-67135016 Msa1032190:intron 55.0%
!! GCCCAATAGTGTTGGTCGTG+AGG - chr7_1:67135002-67135021 None:intergenic 55.0%
TCGTTGACATAAGCGGTGGG+TGG + chr7_1:67135027-67135046 Msa1032190:intron 55.0%
TCAATGGGCCACCTGCTATC+AGG - chr7_1:67135067-67135086 None:intergenic 55.0%
!! CCCCACAAAACCGACTTGTG+AGG + chr7_1:67135140-67135159 Msa1032190:intron 55.0%
GCAATCCCCACCTCACAAGT+CGG - chr7_1:67135153-67135172 None:intergenic 55.0%
AACCTGGTCCTGGCTCAAGA+AGG + chr7_1:67135785-67135804 Msa1032190:CDS 55.0%
GGAGGGTGGTGTTCTCAAGG+TGG + chr7_1:67135712-67135731 Msa1032190:CDS 60.0%
AGCCTTCTTGAGCCAGGACC+AGG - chr7_1:67135790-67135809 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 67131499 67136338 67131499 ID=Msa1032190;Name=Msa1032190
chr7_1 mRNA 67131499 67136338 67131499 ID=Msa1032190-mRNA-1;Parent=Msa1032190;Name=Msa1032190-mRNA-1;_AED=0.20;_eAED=0.20;_QI=193|0|0.5|0.5|1|1|4|468|429
chr7_1 exon 67131499 67132189 67131499 ID=Msa1032190-mRNA-1:exon:15325;Parent=Msa1032190-mRNA-1
chr7_1 exon 67133114 67133222 67133114 ID=Msa1032190-mRNA-1:exon:15326;Parent=Msa1032190-mRNA-1
chr7_1 exon 67133988 67134155 67133988 ID=Msa1032190-mRNA-1:exon:15327;Parent=Msa1032190-mRNA-1
chr7_1 exon 67135356 67136338 67135356 ID=Msa1032190-mRNA-1:exon:15328;Parent=Msa1032190-mRNA-1
chr7_1 five_prime_UTR 67131499 67131691 67131499 ID=Msa1032190-mRNA-1:five_prime_utr;Parent=Msa1032190-mRNA-1
chr7_1 CDS 67131692 67132189 67131692 ID=Msa1032190-mRNA-1:cds;Parent=Msa1032190-mRNA-1
chr7_1 CDS 67133114 67133222 67133114 ID=Msa1032190-mRNA-1:cds;Parent=Msa1032190-mRNA-1
chr7_1 CDS 67133988 67134155 67133988 ID=Msa1032190-mRNA-1:cds;Parent=Msa1032190-mRNA-1
chr7_1 CDS 67135356 67135870 67135356 ID=Msa1032190-mRNA-1:cds;Parent=Msa1032190-mRNA-1
chr7_1 three_prime_UTR 67135871 67136338 67135871 ID=Msa1032190-mRNA-1:three_prime_utr;Parent=Msa1032190-mRNA-1
Gene Sequence

>Msa1032190

ATGGTTATCAAAATATTCATGTTTACCTTCATGGTAACCTCAATATTATTCTTTTTTCTCTTCATCCCTACAAGACTAACCCTTCAAATTTCAACCTTGAAACCTAGTACTATGGACTACTTCAATGTCCTAAAAGCCAACATAACATACCCAATTACTTTTGCTTACTTGATCTCTGCATCCAAAGGTGATACTGTGAAGCTAAAAAGGTTGCTTAAAGTGTTGTATCATCCAAATAACTACTATTTGATTCACATGGATTATGGTGCTCCAGATGCAGAACATAAAGATGTGGCAGAATATGTTGCTAAGGATCCTGTTTTTAGTCAAATTGGAAATGTTTGGATTGTTGGGAAGCCTAATCTTGTAACCTATAGAGGACCAACTATGCTTGCAACTACTCTTCATGCCATGGCAATGCTTCTTAAGACATGTCATTGGGATTGGTTTATTAATCTTAGTGCTTCTGATTATCCCTTGGTTACACAAGATGGTATGAAGTTGCGTGTTATGGTTGGATTTAGAGATTTAAGGATTAAACTATCAATACTGTTCTGGATGCAAAAGAAAATGTCACTTTCAACAATTTGTTCGTTAGTCATGGAAGATAAAGTAGATGATAATCCATGTACATATGGTGATGGTGATGGTATTGTGCAGTGTGCAGTGTCTATTTCTAGTGGATGCACATGCCTGATGGCTGATGCAATTATTTTAGTTAATTTCTTGATTGATTCTAGCAATTCACGTGCCTTCATACTTGTAGAGGAACATGGTTCAGCATGGACAATAGTATCAAGATCATTTTCTGAGTATTGCATCGTGGGATGGGAAAATCTGCCAAGGACTCTACTCCTCTACTACACTAACTTTGTCTCATCACCAGAAGGATATTTCCAAACAGTAATATGCAACTCACAAGACTACAAGAACACCACTGCCAACCATGATCTTCACTACATTACTTGGGACAATCCTCCAAAACAACATCCTAGGTCTCTAGGACTTAAAGATTATAGGAAAATGGTTCTAAGTAGCCGTCCTTTCGCTAGAAAATTCAAGAGAAATGATATTGTTCTCGATAAAATTGATAGAGATCTTTTGAAGAGGTATAAGGGGGGATTTTCTTTTGGAGGGTGGTGTTCTCAAGGTGGAAAGAACAAAGCATGCTCAGGTTTGAGAACTGAGAATTATGGTTTGCTTAAACCTGGTCCTGGCTCAAGAAGGCTCAAAAATTTGTTAAACAAAATCCTTATGGATAAATTTTTTCGCCAAATGCAGTGTAGGTAA
Protein sequence

>Msa1032190

MVIKIFMFTFMVTSILFFFLFIPTRLTLQISTLKPSTMDYFNVLKANITYPITFAYLISASKGDTVKLKRLLKVLYHPNNYYLIHMDYGAPDAEHKDVAEYVAKDPVFSQIGNVWIVGKPNLVTYRGPTMLATTLHAMAMLLKTCHWDWFINLSASDYPLVTQDGMKLRVMVGFRDLRIKLSILFWMQKKMSLSTICSLVMEDKVDDNPCTYGDGDGIVQCAVSISSGCTCLMADAIILVNFLIDSSNSRAFILVEEHGSAWTIVSRSFSEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVICNSQDYKNTTANHDLHYITWDNPPKQHPRSLGLKDYRKMVLSSRPFARKFKRNDIVLDKIDRDLLKRYKGGFSFGGWCSQGGKNKACSGLRTENYGLLKPGPGSRRLKNLLNKILMDKFFRQMQCR*