Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1064560 | XP_003623468.1 | 99.000 | 100 | 1 | 0 | 1 | 100 | 1 | 100 | 1.43e-64 | 200 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1064560 | G7KV21 | 99.000 | 100 | 1 | 0 | 1 | 100 | 1 | 100 | 6.84e-65 | 200 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa1064560 | 0.837311 | 5.601905e-57 | -8.615850e-47 |
| Msa0033880 | Msa1064560 | 0.808755 | 2.650197e-50 | -8.615850e-47 |
| Msa0056270 | Msa1064560 | 0.821407 | 4.105528e-53 | -8.615850e-47 |
| Msa0077540 | Msa1064560 | 0.814373 | 1.592601e-51 | -8.615850e-47 |
| Msa0609000 | Msa1064560 | 0.804927 | 1.707536e-49 | -8.615850e-47 |
| Msa0618930 | Msa1064560 | 0.817712 | 2.860169e-52 | -8.615850e-47 |
| Msa0619860 | Msa1064560 | 0.825155 | 5.469245e-54 | -8.615850e-47 |
| Msa0654870 | Msa1064560 | 0.810680 | 1.021850e-50 | -8.615850e-47 |
| Msa0699190 | Msa1064560 | 0.801053 | 1.079529e-48 | -8.615850e-47 |
| Msa0706390 | Msa1064560 | 0.802288 | 6.022429e-49 | -8.615850e-47 |
| Msa0766670 | Msa1064560 | 0.810090 | 1.370254e-50 | -8.615850e-47 |
| Msa0838370 | Msa1064560 | 0.811880 | 5.610038e-51 | -8.615850e-47 |
| Msa0126840 | Msa1064560 | 0.805566 | 1.254609e-49 | -8.615850e-47 |
| Msa0127850 | Msa1064560 | 0.805522 | 1.281638e-49 | -8.615850e-47 |
| Msa0142110 | Msa1064560 | 0.811692 | 6.163826e-51 | -8.615850e-47 |
| Msa0166750 | Msa1064560 | 0.805841 | 1.098494e-49 | -8.615850e-47 |
| Msa0168940 | Msa1064560 | 0.820346 | 7.199428e-53 | -8.615850e-47 |
| Msa0171850 | Msa1064560 | 0.804153 | 2.476393e-49 | -8.615850e-47 |
| Msa0174000 | Msa1064560 | 0.818091 | 2.348992e-52 | -8.615850e-47 |
| Msa0419520 | Msa1064560 | 0.828974 | 6.671810e-55 | -8.615850e-47 |
| Msa0462880 | Msa1064560 | 0.803453 | 3.460471e-49 | -8.615850e-47 |
| Msa0980940 | Msa1064560 | 0.801117 | 1.047360e-48 | -8.615850e-47 |
| Msa1017510 | Msa1064560 | 0.810532 | 1.100264e-50 | -8.615850e-47 |
| Msa1025940 | Msa1064560 | 0.839543 | 1.488462e-57 | -8.615850e-47 |
| Msa1064560 | Msa1070390 | 0.816350 | 5.787452e-52 | -8.615850e-47 |
| Msa1064560 | Msa1126850 | 0.801885 | 7.289935e-49 | -8.615850e-47 |
| Msa1064560 | Msa1166870 | 0.806929 | 6.478574e-50 | -8.615850e-47 |
| Msa1064560 | Msa1179980 | 0.815860 | 7.447100e-52 | -8.615850e-47 |
| Msa1064560 | Msa1256770 | 0.813325 | 2.710297e-51 | -8.615850e-47 |
| Msa1064560 | Msa1270620 | 0.814007 | 1.917955e-51 | -8.615850e-47 |
| Msa1064560 | Msa1270690 | 0.815893 | 7.318984e-52 | -8.615850e-47 |
| Msa1064560 | Msa1369190 | 0.805056 | 1.605014e-49 | -8.615850e-47 |
| Msa0289180 | Msa1064560 | 0.806778 | 6.974103e-50 | -8.615850e-47 |
| Msa0296250 | Msa1064560 | 0.800135 | 1.661049e-48 | -8.615850e-47 |
| Msa0550540 | Msa1064560 | 0.820359 | 7.151662e-53 | -8.615850e-47 |
| Msa0550570 | Msa1064560 | 0.822753 | 2.000777e-53 | -8.615850e-47 |
| Msa0593700 | Msa1064560 | 0.804202 | 2.418722e-49 | -8.615850e-47 |
| Msa0858440 | Msa1064560 | 0.829448 | 5.119715e-55 | -8.615850e-47 |
| Msa0913240 | Msa1064560 | 0.808406 | 3.146683e-50 | -8.615850e-47 |
| Msa0921870 | Msa1064560 | 0.816720 | 4.780612e-52 | -8.615850e-47 |
| Msa0943170 | Msa1064560 | 0.802048 | 6.750148e-49 | -8.615850e-47 |
| Msa0960830 | Msa1064560 | 0.824431 | 8.101570e-54 | -8.615850e-47 |
| Msa0963020 | Msa1064560 | 0.845228 | 4.628211e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1064560 | MtrunA17_Chr0c32g0494171 | 99.000 | 100 | 1 | 0 | 1 | 100 | 1 | 100 | 1.32e-68 | 200 |
| Msa1064560 | MtrunA17_Chr7g0243961 | 99.000 | 100 | 1 | 0 | 1 | 100 | 1 | 100 | 1.32e-68 | 200 |
| Msa1064560 | MtrunA17_Chr3g0114281 | 63.095 | 84 | 31 | 0 | 12 | 95 | 66 | 149 | 3.39e-36 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1064560 | AT2G38450.1 | 80.952 | 84 | 15 | 1 | 12 | 94 | 53 | 136 | 4.49e-46 | 145 |
| Msa1064560 | AT5G05360.1 | 66.667 | 90 | 30 | 0 | 6 | 95 | 71 | 160 | 1.79e-41 | 134 |
| Msa1064560 | AT5G05360.2 | 64.634 | 82 | 29 | 0 | 6 | 87 | 71 | 152 | 6.09e-36 | 119 |
| Msa1064560 | AT2G38450.2 | 76.471 | 51 | 11 | 1 | 12 | 61 | 53 | 103 | 2.15e-23 | 87.4 |
Find 55 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCACCTTTCAGAATTT+AGG | 0.137030 | 7_2:+57248328 | None:intergenic |
| CCATTTGCTGAAATTGAAAT+TGG | 0.176976 | 7_2:-57250739 | Msa1064560:five_prime_UTR |
| ACTAAACAAATTTCGTAAAT+TGG | 0.182347 | 7_2:-57251059 | Msa1064560:five_prime_UTR |
| ATTCTTAACCAGACTATATT+TGG | 0.195230 | 7_2:-57248358 | Msa1064560:exon |
| TTGTGTGAAACGTTGGTTTA+AGG | 0.206492 | 7_2:-57250645 | Msa1064560:CDS |
| CGTTTGTCTGGCTGGCTTCA+TGG | 0.221109 | 7_2:-57245879 | Msa1064560:three_prime_UTR |
| AACTCACCTTTCAGAATTTA+GGG | 0.248330 | 7_2:+57248329 | None:intergenic |
| GTTGGTTTAAGGATACTCTT+AGG | 0.251388 | 7_2:-57250634 | Msa1064560:CDS |
| TGATGTTAATATGCAGATTT+TGG | 0.257808 | 7_2:-57250597 | Msa1064560:CDS |
| TTGAAATTGGAAGGGATATA+TGG | 0.267428 | 7_2:-57250726 | Msa1064560:exon |
| CCAATTTCAATTTCAGCAAA+TGG | 0.305590 | 7_2:+57250739 | None:intergenic |
| GGATATATGGAGAGCAGTAT+AGG | 0.337976 | 7_2:-57250713 | Msa1064560:exon |
| ACTCGTTTCGTTTGTCTGGC+TGG | 0.345699 | 7_2:-57245887 | Msa1064560:three_prime_UTR |
| ATAGACTCGTTTCGTTTGTC+TGG | 0.347893 | 7_2:-57245891 | Msa1064560:three_prime_UTR |
| CGAGGGTTAGGTCTTCAGTT+TGG | 0.387633 | 7_2:-57248533 | Msa1064560:CDS |
| GATATATGGAGAGCAGTATA+GGG | 0.394996 | 7_2:-57250712 | Msa1064560:exon |
| CAATTTCAATTTCAGCAAAT+GGG | 0.407593 | 7_2:+57250740 | None:intergenic |
| TGACAAAAGCATCGAGGGTT+AGG | 0.410197 | 7_2:-57248545 | Msa1064560:CDS |
| ATCTTCAAAGAACAACAAAA+AGG | 0.422643 | 7_2:-57250873 | Msa1064560:intron |
| TCACATCTTGCAAATAGAAC+AGG | 0.426337 | 7_2:-57246008 | Msa1064560:three_prime_UTR |
| AGGTCTTCAGTTTGGAAAGT+TGG | 0.443829 | 7_2:-57248525 | Msa1064560:CDS |
| GTTGGTCAGATGTATTATAG+TGG | 0.448023 | 7_2:-57250575 | Msa1064560:CDS |
| GAGAGCAGTATAGGGAAAGA+TGG | 0.460620 | 7_2:-57250704 | Msa1064560:CDS |
| TTGCTGAAATTGAAATTGGA+AGG | 0.463912 | 7_2:-57250735 | Msa1064560:five_prime_UTR |
| AGAGAGAGAGAAAGAGAGAG+AGG | 0.466865 | 7_2:+57250963 | None:intergenic |
| GCTTCTTCATAGCCACCATA+TGG | 0.470491 | 7_2:-57246192 | Msa1064560:three_prime_UTR |
| ATTTGAATGGAGAATTAAGA+AGG | 0.490719 | 7_2:+57250927 | None:intergenic |
| TTGGTTTAAGGATACTCTTA+GGG | 0.499307 | 7_2:-57250633 | Msa1064560:CDS |
| TTTGAATGGAGAATTAAGAA+GGG | 0.503374 | 7_2:+57250928 | None:intergenic |
| GTATAGGGAAAGATGGAAAC+GGG | 0.507255 | 7_2:-57250697 | Msa1064560:CDS |
| GGATGGAACCAAATATAGTC+TGG | 0.519089 | 7_2:+57248350 | None:intergenic |
| TAACTGAAAGAACATCCATA+TGG | 0.524519 | 7_2:+57246177 | None:intergenic |
| TGCTGAAATTGAAATTGGAA+GGG | 0.527764 | 7_2:-57250734 | Msa1064560:five_prime_UTR |
| TCTGCCACAACCCCAGATAG+AGG | 0.532783 | 7_2:+57250668 | None:intergenic |
| ACTCTTAGGGAGGCTAAAGC+TGG | 0.533054 | 7_2:-57250620 | Msa1064560:CDS |
| CAGATGTATTATAGTGGCTA+TGG | 0.541971 | 7_2:-57250569 | Msa1064560:CDS |
| CACCTTTCAGAATTTAGGGA+TGG | 0.544378 | 7_2:+57248333 | None:intergenic |
| AAAGTTGGAGATAAGCGTCC+AGG | 0.548549 | 7_2:-57248510 | Msa1064560:intron |
| TGGGAATGAAGGGAAAACTT+TGG | 0.550885 | 7_2:-57248569 | Msa1064560:intron |
| AGTATAGGGAAAGATGGAAA+CGG | 0.551781 | 7_2:-57250698 | Msa1064560:CDS |
| TGTTGCAAAAGATGCTCAAA+AGG | 0.554722 | 7_2:-57250546 | Msa1064560:intron |
| AAAGAGAGAGAGGCAGCTAT+CGG | 0.565552 | 7_2:+57250973 | None:intergenic |
| AGAACATGGATGGATTTGAA+TGG | 0.576276 | 7_2:+57250914 | None:intergenic |
| TTCCATCCCTAAATTCTGAA+AGG | 0.580447 | 7_2:-57248335 | Msa1064560:intron |
| TGGCAGATTGTGTGAAACGT+TGG | 0.602973 | 7_2:-57250652 | Msa1064560:CDS |
| GTTTAAGGATACTCTTAGGG+AGG | 0.610668 | 7_2:-57250630 | Msa1064560:CDS |
| TTGAATGGAGAATTAAGAAG+GGG | 0.614053 | 7_2:+57250929 | None:intergenic |
| TTGGCTGACAAAAGCATCGA+GGG | 0.617055 | 7_2:-57248550 | Msa1064560:CDS |
| CACATCTTGCAAATAGAACA+GGG | 0.629153 | 7_2:-57246007 | Msa1064560:three_prime_UTR |
| CTGAAAGAACATCCATATGG+TGG | 0.632519 | 7_2:+57246180 | None:intergenic |
| TGCTATATGAAGAACATGGA+TGG | 0.647840 | 7_2:+57250904 | None:intergenic |
| CAAGATGTGATGTCATGTCA+AGG | 0.664378 | 7_2:+57246021 | None:intergenic |
| TTTGGCTGACAAAAGCATCG+AGG | 0.704862 | 7_2:-57248551 | Msa1064560:CDS |
| TGACTCTGATGAATCAAACG+AGG | 0.712793 | 7_2:-57248381 | Msa1064560:CDS |
| GTGATGCTATATGAAGAACA+TGG | 0.760345 | 7_2:+57250900 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTATGTAACAAATTT+TGG | - | chr7_2:57246214-57246233 | Msa1064560:three_prime_UTR | 10.0% |
| !!! | AAATTTATGTAACAAATTTT+GGG | - | chr7_2:57246215-57246234 | Msa1064560:three_prime_UTR | 10.0% |
| !!! | ATGATCATTTTTTTTAAAAA+AGG | + | chr7_2:57248037-57248056 | None:intergenic | 10.0% |
| !! | TATTTAAATATATAGAGTAA+TGG | - | chr7_2:57248335-57248354 | Msa1064560:intron | 10.0% |
| !!! | ATTTTTTTTTTTTAGATGAT+TGG | - | chr7_2:57248825-57248844 | Msa1064560:intron | 10.0% |
| !! | ATAAAAGGATATTTATTAAT+GGG | + | chr7_2:57249149-57249168 | None:intergenic | 10.0% |
| !! | AATAAAAGGATATTTATTAA+TGG | + | chr7_2:57249150-57249169 | None:intergenic | 10.0% |
| !! | TAAAAAGATATTTATTAATG+GGG | - | chr7_2:57249198-57249217 | Msa1064560:intron | 10.0% |
| !! | TAAAGAAATAAATAAAACCT+AGG | - | chr7_2:57246670-57246689 | Msa1064560:intron | 15.0% |
| !!! | TATTTTTAATGCTATCATTA+GGG | + | chr7_2:57247590-57247609 | None:intergenic | 15.0% |
| !!! | ATATTTTTAATGCTATCATT+AGG | + | chr7_2:57247591-57247610 | None:intergenic | 15.0% |
| !!! | AAACTTTTAATTTATGTTTC+TGG | - | chr7_2:57247791-57247810 | Msa1064560:intron | 15.0% |
| !! | CTGATATATAAATTAAAACA+AGG | + | chr7_2:57248252-57248271 | None:intergenic | 15.0% |
| !!! | TTTAATTTATATATCAGAAG+TGG | - | chr7_2:57248255-57248274 | Msa1064560:intron | 15.0% |
| !!! | AATTTTGTATCTATGATTTT+GGG | + | chr7_2:57248875-57248894 | None:intergenic | 15.0% |
| !!! | TAATTTTGTATCTATGATTT+TGG | + | chr7_2:57248876-57248895 | None:intergenic | 15.0% |
| !! | AAATCATAGATACAAAATTA+TGG | - | chr7_2:57248876-57248895 | Msa1064560:intron | 15.0% |
| !! | TTATGGCATATTATAAAATA+CGG | - | chr7_2:57248893-57248912 | Msa1064560:intron | 15.0% |
| !! | ATAAAATTGCACTAAATAAA+AGG | + | chr7_2:57249164-57249183 | None:intergenic | 15.0% |
| !! | AAATCATACATACAAAATTA+TGG | + | chr7_2:57249479-57249498 | None:intergenic | 15.0% |
| !!! | TAATTTTGTATGTATGATTT+CGG | - | chr7_2:57249479-57249498 | Msa1064560:intron | 15.0% |
| !! | AAATCATTCAATTGTTTATT+AGG | - | chr7_2:57250034-57250053 | Msa1064560:intron | 15.0% |
| !! | TTATCTAACTATAAAACTTA+AGG | + | chr7_2:57250146-57250165 | None:intergenic | 15.0% |
| !! | ACCTACAAAAAAAAAAAAAA+CGG | + | chr7_2:57250788-57250807 | None:intergenic | 15.0% |
| !!! | CATTGATTGATAAAAAAAAA+TGG | + | chr7_2:57250906-57250925 | None:intergenic | 15.0% |
| !!! | TTACATCTTTTTCTTTTTGA+GGG | + | chr7_2:57245894-57245913 | None:intergenic | 20.0% |
| !!! | ATTACATCTTTTTCTTTTTG+AGG | + | chr7_2:57245895-57245914 | None:intergenic | 20.0% |
| !! | ACTAAACAAATTTCGTAAAT+TGG | - | chr7_2:57245962-57245981 | Msa1064560:three_prime_UTR | 20.0% |
| !!! | AAAATTTTCACAATCTCAAT+TGG | - | chr7_2:57246173-57246192 | Msa1064560:three_prime_UTR | 20.0% |
| !!! | AAATTTTCACAATCTCAATT+GGG | - | chr7_2:57246174-57246193 | Msa1064560:three_prime_UTR | 20.0% |
| !!! | ATTTTGGGATTTTTTTTTTC+AGG | - | chr7_2:57246230-57246249 | Msa1064560:intron | 20.0% |
| !!! | TTTCTTTGTTTTCTTGTTTT+TGG | - | chr7_2:57246502-57246521 | Msa1064560:intron | 20.0% |
| !!! | TGTTTTTATTTAACTTGCAT+TGG | - | chr7_2:57246539-57246558 | Msa1064560:intron | 20.0% |
| !!! | TTTTTGTTTGTTTGTTTCTT+TGG | - | chr7_2:57246563-57246582 | Msa1064560:intron | 20.0% |
| !!! | AAACACGATTTCTTTTAAAA+AGG | + | chr7_2:57247044-57247063 | None:intergenic | 20.0% |
| !! | ATTCATTTCTTTATTCACTT+TGG | + | chr7_2:57247068-57247087 | None:intergenic | 20.0% |
| !! | TAAAGAAATGAATAAAACCT+AGG | - | chr7_2:57247075-57247094 | Msa1064560:intron | 20.0% |
| !! | ACCTGTATTATATATCATAT+CGG | - | chr7_2:57247430-57247449 | Msa1064560:intron | 20.0% |
| !! | TAAAAAAAATAATGCTGAGT+TGG | - | chr7_2:57247645-57247664 | Msa1064560:intron | 20.0% |
| !! | AAAAAAAATAATGCTGAGTT+GGG | - | chr7_2:57247646-57247665 | Msa1064560:intron | 20.0% |
| !! | ATTAAATTCACATAAATGTG+TGG | + | chr7_2:57248072-57248091 | None:intergenic | 20.0% |
| !! | TGTAAAGAATAGAAAAACAT+TGG | - | chr7_2:57248118-57248137 | Msa1064560:intron | 20.0% |
| !! | AGTTTCTATTGTGAAATATA+TGG | - | chr7_2:57248292-57248311 | Msa1064560:intron | 20.0% |
| !! | TATTGTGAAATATATGGTTA+TGG | - | chr7_2:57248298-57248317 | Msa1064560:intron | 20.0% |
| !! | GAGATTAACATTATTTGTTT+GGG | - | chr7_2:57248433-57248452 | Msa1064560:intron | 20.0% |
| !! | TTTCAATTAGATAGTAAATG+TGG | + | chr7_2:57248776-57248795 | None:intergenic | 20.0% |
| !!! | TATATACTGACTATCTTATT+AGG | - | chr7_2:57249304-57249323 | Msa1064560:intron | 20.0% |
| !!! | AATTTTGTATGTATGATTTC+GGG | - | chr7_2:57249480-57249499 | Msa1064560:intron | 20.0% |
| !! | ATCCAAATACTAAGAAAAAA+GGG | + | chr7_2:57249583-57249602 | None:intergenic | 20.0% |
| !! | AATCCAAATACTAAGAAAAA+AGG | + | chr7_2:57249584-57249603 | None:intergenic | 20.0% |
| !!! | TAAATTTTACCATTCACAAA+TGG | - | chr7_2:57250309-57250328 | Msa1064560:intron | 20.0% |
| !!! | TTCAACAATTGATATTTTCT+AGG | - | chr7_2:57250635-57250654 | Msa1064560:CDS | 20.0% |
| !!! | TCAACAATTGATATTTTCTA+GGG | - | chr7_2:57250636-57250655 | Msa1064560:CDS | 20.0% |
| !! | TTCAACCTGAAAATAAAAAA+TGG | + | chr7_2:57250735-57250754 | None:intergenic | 20.0% |
| !!! | TCCGTTTTTTTTTTTTTTGT+AGG | - | chr7_2:57250784-57250803 | Msa1064560:intron | 20.0% |
| !!! | TACATCTTTTTCTTTTTGAG+GGG | + | chr7_2:57245893-57245912 | None:intergenic | 25.0% |
| ! | TTTGAATGGAGAATTAAGAA+GGG | + | chr7_2:57246096-57246115 | None:intergenic | 25.0% |
| ! | ATTTGAATGGAGAATTAAGA+AGG | + | chr7_2:57246097-57246116 | None:intergenic | 25.0% |
| ! | ATCTTCAAAGAACAACAAAA+AGG | - | chr7_2:57246148-57246167 | Msa1064560:three_prime_UTR | 25.0% |
| ! | CAATTTCAATTTCAGCAAAT+GGG | + | chr7_2:57246284-57246303 | None:intergenic | 25.0% |
| !! | TGATGTTAATATGCAGATTT+TGG | - | chr7_2:57246424-57246443 | Msa1064560:intron | 25.0% |
| ! | TATATTGCATGATAATAGTG+AGG | - | chr7_2:57246629-57246648 | Msa1064560:intron | 25.0% |
| !!! | GATTTCTTTTAAAAAGGTTC+AGG | + | chr7_2:57247038-57247057 | None:intergenic | 25.0% |
| ! | GATATATAATACAGGTTTAG+CGG | + | chr7_2:57247426-57247445 | None:intergenic | 25.0% |
| ! | CCTGTATTATATATCATATC+GGG | - | chr7_2:57247431-57247450 | Msa1064560:intron | 25.0% |
| ! | TTATATATCATATCGGGATT+TGG | - | chr7_2:57247437-57247456 | Msa1064560:intron | 25.0% |
| ! | AAAAAAATAATGCTGAGTTG+GGG | - | chr7_2:57247647-57247666 | Msa1064560:intron | 25.0% |
| ! | TATTTATTTCAACCACTTTG+TGG | - | chr7_2:57247868-57247887 | Msa1064560:intron | 25.0% |
| ! | CTAAAATCCAATATGAGAAA+AGG | + | chr7_2:57247923-57247942 | None:intergenic | 25.0% |
| !! | CTTTTCTCATATTGGATTTT+AGG | - | chr7_2:57247921-57247940 | Msa1064560:intron | 25.0% |
| ! | TATTCTTTACATATACAGAC+AGG | + | chr7_2:57248109-57248128 | None:intergenic | 25.0% |
| !!! | ACGTTTTAACATCATTAAAC+TGG | + | chr7_2:57248209-57248228 | None:intergenic | 25.0% |
| ! | GGAGATTAACATTATTTGTT+TGG | - | chr7_2:57248432-57248451 | Msa1064560:intron | 25.0% |
| ! | ATTATTTGTTTGGGAATGAA+GGG | - | chr7_2:57248442-57248461 | Msa1064560:intron | 25.0% |
| !! | TTTTCCTTTGTAAGTTAATG+TGG | - | chr7_2:57248569-57248588 | Msa1064560:intron | 25.0% |
| !!! | TTGTTTGCTGCATTTTTATT+AGG | - | chr7_2:57248599-57248618 | Msa1064560:intron | 25.0% |
| ! | ATTCTTAACCAGACTATATT+TGG | - | chr7_2:57248663-57248682 | Msa1064560:intron | 25.0% |
| !! | TTTTTAGATGATTGGTGTAA+AGG | - | chr7_2:57248833-57248852 | Msa1064560:intron | 25.0% |
| ! | TCAAAGAAATCTCATTCTAA+AGG | + | chr7_2:57249014-57249033 | None:intergenic | 25.0% |
| ! | ATAGTCAGTATATATAAGCA+TGG | - | chr7_2:57249055-57249074 | Msa1064560:intron | 25.0% |
| ! | AGTATATATAAGCACTAGTA+GGG | + | chr7_2:57249292-57249311 | None:intergenic | 25.0% |
| ! | ATCTTTGTTAAAATCCTTCA+TGG | - | chr7_2:57249505-57249524 | Msa1064560:intron | 25.0% |
| !!! | TACCCTTTTTTCTTAGTATT+TGG | - | chr7_2:57249578-57249597 | Msa1064560:intron | 25.0% |
| ! | TTAGTGTTGTGTTATCTAAA+TGG | - | chr7_2:57249671-57249690 | Msa1064560:intron | 25.0% |
| ! | TATGTTGAATCTACATTGAA+AGG | - | chr7_2:57249749-57249768 | Msa1064560:intron | 25.0% |
| ! | ATGTTGAATCTACATTGAAA+GGG | - | chr7_2:57249750-57249769 | Msa1064560:intron | 25.0% |
| ! | GCTTTCAAATTCAAATCATA+CGG | + | chr7_2:57249822-57249841 | None:intergenic | 25.0% |
| ! | AGTTAAGGATTCAAAGAATA+AGG | + | chr7_2:57249966-57249985 | None:intergenic | 25.0% |
| ! | TCTAACTATAAAACTTAAGG+TGG | + | chr7_2:57250143-57250162 | None:intergenic | 25.0% |
| !!! | ATAGAGTGCTTATCAATTTT+GGG | - | chr7_2:57250181-57250200 | Msa1064560:intron | 25.0% |
| ! | TAAATTTGTCCATTTGTGAA+TGG | + | chr7_2:57250321-57250340 | None:intergenic | 25.0% |
| ! | TTCACAAATGGACAAATTTA+TGG | - | chr7_2:57250321-57250340 | Msa1064560:intron | 25.0% |
| !! | AGACTTGATTAAAAGTGTAA+TGG | - | chr7_2:57250420-57250439 | Msa1064560:intron | 25.0% |
| ! | AACAAACTAAGTACATGTTT+GGG | - | chr7_2:57250463-57250482 | Msa1064560:intron | 25.0% |
| ! | AAATAAAAAATGGTCTGTTC+TGG | + | chr7_2:57250725-57250744 | None:intergenic | 25.0% |
| !!! | ACAGACCATTTTTTATTTTC+AGG | - | chr7_2:57250727-57250746 | Msa1064560:exon | 25.0% |
| !!! | TTTGATTTTTGAGCATATTG+TGG | - | chr7_2:57250944-57250963 | Msa1064560:five_prime_UTR | 25.0% |
| ! | ACGAGTCTATAAAAATGAAA+GGG | + | chr7_2:57251120-57251139 | None:intergenic | 25.0% |
| ! | AACGAGTCTATAAAAATGAA+AGG | + | chr7_2:57251121-57251140 | None:intergenic | 25.0% |
| TTGAATGGAGAATTAAGAAG+GGG | + | chr7_2:57246095-57246114 | None:intergenic | 30.0% | |
| CCAATTTCAATTTCAGCAAA+TGG | + | chr7_2:57246285-57246304 | None:intergenic | 30.0% | |
| ! | CCATTTGCTGAAATTGAAAT+TGG | - | chr7_2:57246282-57246301 | Msa1064560:intron | 30.0% |
| TTGCTGAAATTGAAATTGGA+AGG | - | chr7_2:57246286-57246305 | Msa1064560:intron | 30.0% | |
| TGCTGAAATTGAAATTGGAA+GGG | - | chr7_2:57246287-57246306 | Msa1064560:intron | 30.0% | |
| TTGAAATTGGAAGGGATATA+TGG | - | chr7_2:57246295-57246314 | Msa1064560:intron | 30.0% | |
| TTGGTTTAAGGATACTCTTA+GGG | - | chr7_2:57246388-57246407 | Msa1064560:intron | 30.0% | |
| !! | GTTAATATGCAGATTTTGGT+TGG | - | chr7_2:57246428-57246447 | Msa1064560:intron | 30.0% |
| ! | TGTTTGTTTGTTTCTTTGGT+TGG | - | chr7_2:57246567-57246586 | Msa1064560:intron | 30.0% |
| ! | GTGTCTTAAATCTGAAGTAT+CGG | - | chr7_2:57247223-57247242 | Msa1064560:intron | 30.0% |
| TGTTAGCATTTACAGGTATT+AGG | + | chr7_2:57247284-57247303 | None:intergenic | 30.0% | |
| AAAACGTTGTTAGCATTTAC+AGG | + | chr7_2:57247291-57247310 | None:intergenic | 30.0% | |
| CCCGATATGATATATAATAC+AGG | + | chr7_2:57247434-57247453 | None:intergenic | 30.0% | |
| AAAAATCACTGCTATTGTAG+TGG | + | chr7_2:57247505-57247524 | None:intergenic | 30.0% | |
| !!! | GCAGTGATTTTTTTGCAAAT+CGG | - | chr7_2:57247513-57247532 | Msa1064560:intron | 30.0% |
| ! | CTATACACCTTTTCTCATAT+TGG | - | chr7_2:57247913-57247932 | Msa1064560:intron | 30.0% |
| ! | TCACATAAATGTGTGGATTT+TGG | + | chr7_2:57248065-57248084 | None:intergenic | 30.0% |
| AACATTGGAAGTTCTATTGT+TGG | - | chr7_2:57248133-57248152 | Msa1064560:intron | 30.0% | |
| ! | AAACGTAATGATTTGTGCTT+TGG | - | chr7_2:57248223-57248242 | Msa1064560:intron | 30.0% |
| TATGAAGTATGAACAATGAG+TGG | - | chr7_2:57248364-57248383 | Msa1064560:exon | 30.0% | |
| !! | TGTTTGTCTGTCTTTTGTTT+TGG | - | chr7_2:57248410-57248429 | Msa1064560:intron | 30.0% |
| !!! | GTTTGTCTGTCTTTTGTTTT+GGG | - | chr7_2:57248411-57248430 | Msa1064560:intron | 30.0% |
| CATTATTTGTTTGGGAATGA+AGG | - | chr7_2:57248441-57248460 | Msa1064560:intron | 30.0% | |
| TTAGCCACATTAACTTACAA+AGG | + | chr7_2:57248576-57248595 | None:intergenic | 30.0% | |
| AACTCACCTTTCAGAATTTA+GGG | + | chr7_2:57248695-57248714 | None:intergenic | 30.0% | |
| AAACTCACCTTTCAGAATTT+AGG | + | chr7_2:57248696-57248715 | None:intergenic | 30.0% | |
| CATTATTGAGTAACAACATG+AGG | + | chr7_2:57248739-57248758 | None:intergenic | 30.0% | |
| ! | ACTCAATAATGACCTCTTTT+TGG | - | chr7_2:57248748-57248767 | Msa1064560:intron | 30.0% |
| TGAACAACTATCTAACCTAA+TGG | - | chr7_2:57249031-57249050 | Msa1064560:intron | 30.0% | |
| GAACAACTATCTAACCTAAT+GGG | - | chr7_2:57249032-57249051 | Msa1064560:intron | 30.0% | |
| ! | TATATACTGACTATCCCATT+AGG | + | chr7_2:57249049-57249068 | None:intergenic | 30.0% |
| AGTATATATAAGCATGGAGA+GGG | - | chr7_2:57249061-57249080 | Msa1064560:intron | 30.0% | |
| !! | TAATGGGCTGTAATTAGAAA+CGG | + | chr7_2:57249133-57249152 | None:intergenic | 30.0% |
| CAGTATATATAAGCACTAGT+AGG | + | chr7_2:57249293-57249312 | None:intergenic | 30.0% | |
| ! | TACTGACTATCTTATTAGGT+CGG | - | chr7_2:57249308-57249327 | Msa1064560:intron | 30.0% |
| TCAAAGAACTCACATTCTAA+AGG | - | chr7_2:57249339-57249358 | Msa1064560:intron | 30.0% | |
| ! | ATAGTACAAAGCAACTTGTT+TGG | - | chr7_2:57250075-57250094 | Msa1064560:intron | 30.0% |
| ! | TACTTGTTTGACTGTGTTTT+TGG | - | chr7_2:57250111-57250130 | Msa1064560:intron | 30.0% |
| !! | GATAGAGTGCTTATCAATTT+TGG | - | chr7_2:57250180-57250199 | Msa1064560:intron | 30.0% |
| AAATGGACAAATTTATGGTG+TGG | - | chr7_2:57250326-57250345 | Msa1064560:intron | 30.0% | |
| ACAAATTTATGGTGTGGTTT+CGG | - | chr7_2:57250332-57250351 | Msa1064560:intron | 30.0% | |
| !! | TCAATGTTGATTCTACTAGT+TGG | - | chr7_2:57250374-57250393 | Msa1064560:intron | 30.0% |
| !! | CAATGTTGATTCTACTAGTT+GGG | - | chr7_2:57250375-57250394 | Msa1064560:intron | 30.0% |
| ! | AAAGTGTAATGGAAACTGAA+CGG | - | chr7_2:57250431-57250450 | Msa1064560:intron | 30.0% |
| CAACAAACTAAGTACATGTT+TGG | - | chr7_2:57250462-57250481 | Msa1064560:intron | 30.0% | |
| TTGAAACTTCAACAAAACCA+TGG | + | chr7_2:57250501-57250520 | None:intergenic | 30.0% | |
| !! | CATAGCTTTGTTCAAAATCA+TGG | - | chr7_2:57250523-57250542 | Msa1064560:intron | 30.0% |
| !! | AAACTAACTTGGTGTATGTT+TGG | + | chr7_2:57250583-57250602 | None:intergenic | 30.0% |
| CAAAATCAATCTACCAGAAA+GGG | + | chr7_2:57250761-57250780 | None:intergenic | 30.0% | |
| ACAAAATCAATCTACCAGAA+AGG | + | chr7_2:57250762-57250781 | None:intergenic | 30.0% | |
| TAACTGAAAGAACATCCATA+TGG | + | chr7_2:57250847-57250866 | None:intergenic | 30.0% | |
| ! | AGAACATGGATGGATTTGAA+TGG | + | chr7_2:57246110-57246129 | None:intergenic | 35.0% |
| TGCTATATGAAGAACATGGA+TGG | + | chr7_2:57246120-57246139 | None:intergenic | 35.0% | |
| GTGATGCTATATGAAGAACA+TGG | + | chr7_2:57246124-57246143 | None:intergenic | 35.0% | |
| GATATATGGAGAGCAGTATA+GGG | - | chr7_2:57246309-57246328 | Msa1064560:intron | 35.0% | |
| AGTATAGGGAAAGATGGAAA+CGG | - | chr7_2:57246323-57246342 | Msa1064560:intron | 35.0% | |
| !! | TTGTGTGAAACGTTGGTTTA+AGG | - | chr7_2:57246376-57246395 | Msa1064560:intron | 35.0% |
| ! | GTTGGTTTAAGGATACTCTT+AGG | - | chr7_2:57246387-57246406 | Msa1064560:intron | 35.0% |
| GTTGGTCAGATGTATTATAG+TGG | - | chr7_2:57246446-57246465 | Msa1064560:intron | 35.0% | |
| CAGATGTATTATAGTGGCTA+TGG | - | chr7_2:57246452-57246471 | Msa1064560:intron | 35.0% | |
| TGTTGCAAAAGATGCTCAAA+AGG | - | chr7_2:57246475-57246494 | Msa1064560:intron | 35.0% | |
| TCTGGTGTTCATATCTATGT+CGG | + | chr7_2:57246706-57246725 | None:intergenic | 35.0% | |
| ! | GTGTCGTAAATCTGAAGTAT+TGG | - | chr7_2:57246825-57246844 | Msa1064560:intron | 35.0% |
| !! | GCTAACAACGTTTTAAGTCA+CGG | - | chr7_2:57246899-57246918 | Msa1064560:intron | 35.0% |
| !! | GCTAACAACGTTTTAAGTCA+TGG | - | chr7_2:57246899-57246918 | Msa1064560:intron | 35.0% |
| !!! | TAGTGTATTGGCTTTTGTCA+CGG | + | chr7_2:57247468-57247487 | None:intergenic | 35.0% |
| GTCGAATTGCAATAGTGTAT+TGG | + | chr7_2:57247480-57247499 | None:intergenic | 35.0% | |
| ! | TTTTTGCAAATCGGCTATAG+CGG | - | chr7_2:57247522-57247541 | Msa1064560:intron | 35.0% |
| TTAGTGATGATAGGTTACCT+AGG | + | chr7_2:57247701-57247720 | None:intergenic | 35.0% | |
| TATGAAGTGAAGAGAGAAGA+TGG | + | chr7_2:57247739-57247758 | None:intergenic | 35.0% | |
| TAGCAAATCGTGGAAAATAG+CGG | + | chr7_2:57247951-57247970 | None:intergenic | 35.0% | |
| GTGTTATCAATAGCAAATCG+TGG | + | chr7_2:57247961-57247980 | None:intergenic | 35.0% | |
| ! | TGCTATTGATAACACCATCT+TGG | - | chr7_2:57247966-57247985 | Msa1064560:intron | 35.0% |
| ! | TATTGATAACACCATCTTGG+AGG | - | chr7_2:57247969-57247988 | Msa1064560:intron | 35.0% |
| ! | AGTATTTTATGCCTCCAAGA+TGG | + | chr7_2:57247983-57248002 | None:intergenic | 35.0% |
| ATTGGAAGTTCTATTGTTGG+TGG | - | chr7_2:57248136-57248155 | Msa1064560:intron | 35.0% | |
| TAAAACAGTAGAGGTTTACC+TGG | + | chr7_2:57248532-57248551 | None:intergenic | 35.0% | |
| ATAAGCTGCTAAAACAGTAG+AGG | + | chr7_2:57248541-57248560 | None:intergenic | 35.0% | |
| TTCCATCCCTAAATTCTGAA+AGG | - | chr7_2:57248686-57248705 | Msa1064560:intron | 35.0% | |
| GCTTCTCTGACAAAATCATT+TGG | + | chr7_2:57248948-57248967 | None:intergenic | 35.0% | |
| ! | GAAATCTCATTCTAAAGGTC+AGG | + | chr7_2:57249009-57249028 | None:intergenic | 35.0% |
| CAGTATATATAAGCATGGAG+AGG | - | chr7_2:57249060-57249079 | Msa1064560:intron | 35.0% | |
| !! | AATGGGCTGTAATTAGAAAC+GGG | + | chr7_2:57249132-57249151 | None:intergenic | 35.0% |
| TCGATTACCATTCATGATCA+AGG | - | chr7_2:57249426-57249445 | Msa1064560:intron | 35.0% | |
| ACATACACCTTGATCATGAA+TGG | + | chr7_2:57249436-57249455 | None:intergenic | 35.0% | |
| TGATACAAAACACACCATGA+AGG | + | chr7_2:57249522-57249541 | None:intergenic | 35.0% | |
| ! | TTCATGGTGTGTTTTGTATC+AGG | - | chr7_2:57249521-57249540 | Msa1064560:intron | 35.0% |
| !! | GCTCAGATTTATTTCTGACT+TGG | - | chr7_2:57249546-57249565 | Msa1064560:intron | 35.0% |
| TCTACATTGAAAGGGATTTC+AGG | - | chr7_2:57249758-57249777 | Msa1064560:intron | 35.0% | |
| ! | TTTTCCATGCATGAGATTCA+AGG | + | chr7_2:57249898-57249917 | None:intergenic | 35.0% |
| CTTTGAATCCTTAACTGCTT+TGG | - | chr7_2:57249970-57249989 | Msa1064560:intron | 35.0% | |
| TGACAATACCAAAGCAGTTA+AGG | + | chr7_2:57249981-57250000 | None:intergenic | 35.0% | |
| !! | TTAGATAACTTGCTGAGTCT+AGG | - | chr7_2:57250158-57250177 | Msa1064560:intron | 35.0% |
| ! | GCTAGCATCTTTGTTCTAAA+AGG | - | chr7_2:57250266-57250285 | Msa1064560:intron | 35.0% |
| ! | AAGTGTAATGGAAACTGAAC+GGG | - | chr7_2:57250432-57250451 | Msa1064560:intron | 35.0% |
| ! | TAAGTACATGTTTGGGATCA+CGG | - | chr7_2:57250470-57250489 | Msa1064560:intron | 35.0% |
| !! | AGCTTTGTTCAAAATCATGG+TGG | - | chr7_2:57250526-57250545 | Msa1064560:intron | 35.0% |
| !! | GTTTGGATTGATAGTGAGTT+TGG | + | chr7_2:57250566-57250585 | None:intergenic | 35.0% |
| AAAGTTCAGGGAAACTAACT+TGG | + | chr7_2:57250594-57250613 | None:intergenic | 35.0% | |
| !! | TTCTGGAACACAAAAGTTCA+GGG | + | chr7_2:57250606-57250625 | None:intergenic | 35.0% |
| TTGTTGAAAAAGATGCCTTC+TGG | + | chr7_2:57250623-57250642 | None:intergenic | 35.0% | |
| !!! | TATTTTCTAGGGCGAGTTTA+TGG | - | chr7_2:57250647-57250666 | Msa1064560:CDS | 35.0% |
| TCACATCTTGCAAATAGAAC+AGG | - | chr7_2:57251013-57251032 | Msa1064560:five_prime_UTR | 35.0% | |
| CACATCTTGCAAATAGAACA+GGG | - | chr7_2:57251014-57251033 | Msa1064560:five_prime_UTR | 35.0% | |
| TATCGGAGAAAAAGACAGTG+CGG | + | chr7_2:57246034-57246053 | None:intergenic | 40.0% | |
| GGATATATGGAGAGCAGTAT+AGG | - | chr7_2:57246308-57246327 | Msa1064560:intron | 40.0% | |
| GTATAGGGAAAGATGGAAAC+GGG | - | chr7_2:57246324-57246343 | Msa1064560:intron | 40.0% | |
| GTTTAAGGATACTCTTAGGG+AGG | - | chr7_2:57246391-57246410 | Msa1064560:intron | 40.0% | |
| TGCAAAAGATGCTCAAAAGG+TGG | - | chr7_2:57246478-57246497 | Msa1064560:intron | 40.0% | |
| ! | TTGCAGTTGTGTTGCGATTT+TGG | - | chr7_2:57246973-57246992 | Msa1064560:intron | 40.0% |
| GCAAAGGATTGCAGATGATA+TGG | - | chr7_2:57247342-57247361 | Msa1064560:intron | 40.0% | |
| ! | AGATGATATGGCCTTGATTG+CGG | - | chr7_2:57247354-57247373 | Msa1064560:intron | 40.0% |
| GAGCTGCGTTGTTAAATAAC+TGG | - | chr7_2:57247393-57247412 | Msa1064560:intron | 40.0% | |
| AGCGGTTATTGCTTGCATAT+TGG | - | chr7_2:57247540-57247559 | Msa1064560:intron | 40.0% | |
| TCTTATAAACCCCATGACCT+AGG | - | chr7_2:57247681-57247700 | Msa1064560:intron | 40.0% | |
| TGATAGGTTACCTAGGTCAT+GGG | + | chr7_2:57247694-57247713 | None:intergenic | 40.0% | |
| ATGATAGGTTACCTAGGTCA+TGG | + | chr7_2:57247695-57247714 | None:intergenic | 40.0% | |
| AGAAGCGGTTTAGTGATGAT+AGG | + | chr7_2:57247710-57247729 | None:intergenic | 40.0% | |
| AAATAGAGGAAGCCACAAAG+TGG | + | chr7_2:57247883-57247902 | None:intergenic | 40.0% | |
| ! | AGAAAAGGTGTATAGCGTAG+CGG | + | chr7_2:57247908-57247927 | None:intergenic | 40.0% |
| TGAACAATGAGTGGAGTCTT+TGG | - | chr7_2:57248373-57248392 | Msa1064560:CDS | 40.0% | |
| TGGGAATGAAGGGAAAACTT+TGG | - | chr7_2:57248452-57248471 | Msa1064560:intron | 40.0% | |
| AGGTCTTCAGTTTGGAAAGT+TGG | - | chr7_2:57248496-57248515 | Msa1064560:intron | 40.0% | |
| TGACTCTGATGAATCAAACG+AGG | - | chr7_2:57248640-57248659 | Msa1064560:intron | 40.0% | |
| GGATGGAACCAAATATAGTC+TGG | + | chr7_2:57248674-57248693 | None:intergenic | 40.0% | |
| CACCTTTCAGAATTTAGGGA+TGG | + | chr7_2:57248691-57248710 | None:intergenic | 40.0% | |
| !! | TGAGGAGTGTTCAAAGCATT+GGG | + | chr7_2:57248721-57248740 | None:intergenic | 40.0% |
| !! | ATGAGGAGTGTTCAAAGCAT+TGG | + | chr7_2:57248722-57248741 | None:intergenic | 40.0% |
| GTAAATGTGGCACCAAAAAG+AGG | + | chr7_2:57248763-57248782 | None:intergenic | 40.0% | |
| TTGGTTACCATCCATGATCA+AGG | + | chr7_2:57248929-57248948 | None:intergenic | 40.0% | |
| ! | CTCATTCTAAAGGTCAGGAA+GGG | + | chr7_2:57249004-57249023 | None:intergenic | 40.0% |
| ! | TCTCATTCTAAAGGTCAGGA+AGG | + | chr7_2:57249005-57249024 | None:intergenic | 40.0% |
| AATGGGGCAGTAAGTAGAAA+CGG | - | chr7_2:57249214-57249233 | Msa1064560:intron | 40.0% | |
| !! | CTCATAGTAAGCTTGTTGAG+AGG | - | chr7_2:57249259-57249278 | Msa1064560:intron | 40.0% |
| TATAAGCACTAGTAGGGAGA+GGG | + | chr7_2:57249286-57249305 | None:intergenic | 40.0% | |
| ATATAAGCACTAGTAGGGAG+AGG | + | chr7_2:57249287-57249306 | None:intergenic | 40.0% | |
| ! | GTACAAAGCAACTTGTTTGG+TGG | - | chr7_2:57250078-57250097 | Msa1064560:intron | 40.0% |
| ! | ACTTGTTTGGTGGTTGAGTT+TGG | - | chr7_2:57250088-57250107 | Msa1064560:intron | 40.0% |
| ATCTTCACAAAGTGAGAGAG+TGG | - | chr7_2:57250228-57250247 | Msa1064560:intron | 40.0% | |
| !! | CTTCTGGAACACAAAAGTTC+AGG | + | chr7_2:57250607-57250626 | None:intergenic | 40.0% |
| ! | CTGAACTTTTGTGTTCCAGA+AGG | - | chr7_2:57250605-57250624 | Msa1064560:CDS | 40.0% |
| !! | TCAGGTTGAATTTCCCTTTC+TGG | - | chr7_2:57250745-57250764 | Msa1064560:five_prime_UTR | 40.0% |
| CTGAAAGAACATCCATATGG+TGG | + | chr7_2:57250844-57250863 | None:intergenic | 40.0% | |
| CAAGATGTGATGTCATGTCA+AGG | + | chr7_2:57251003-57251022 | None:intergenic | 40.0% | |
| ATAGACTCGTTTCGTTTGTC+TGG | - | chr7_2:57251130-57251149 | Msa1064560:intron | 40.0% | |
| AAAGAGAGAGAGGCAGCTAT+CGG | + | chr7_2:57246051-57246070 | None:intergenic | 45.0% | |
| AGAGAGAGAGAAAGAGAGAG+AGG | + | chr7_2:57246061-57246080 | None:intergenic | 45.0% | |
| GAGAGCAGTATAGGGAAAGA+TGG | - | chr7_2:57246317-57246336 | Msa1064560:intron | 45.0% | |
| !! | TTTTCCTCTATCTGGGGTTG+TGG | - | chr7_2:57246349-57246368 | Msa1064560:intron | 45.0% |
| TGGCAGATTGTGTGAAACGT+TGG | - | chr7_2:57246369-57246388 | Msa1064560:intron | 45.0% | |
| CAATACTGAGCATCACAACG+TGG | + | chr7_2:57246925-57246944 | None:intergenic | 45.0% | |
| GCGAAGAATTGCAGCTGATA+TGG | - | chr7_2:57246944-57246963 | Msa1064560:intron | 45.0% | |
| AAGGTTCAGGACTGCAATCT+AGG | + | chr7_2:57247025-57247044 | None:intergenic | 45.0% | |
| TGTTCGTGTCAGTTCTTCCT+AGG | + | chr7_2:57247095-57247114 | None:intergenic | 45.0% | |
| TGTCAGCATTGTGTCATGTC+TGG | + | chr7_2:57247118-57247137 | None:intergenic | 45.0% | |
| TGCGATGCTTGGTATTGCAA+AGG | - | chr7_2:57247326-57247345 | Msa1064560:intron | 45.0% | |
| GATAGGTTACCTAGGTCATG+GGG | + | chr7_2:57247693-57247712 | None:intergenic | 45.0% | |
| AGTGAAGAGAGAAGATGGAG+AGG | + | chr7_2:57247734-57247753 | None:intergenic | 45.0% | |
| ! | GAAAAGGTGTATAGCGTAGC+GGG | + | chr7_2:57247907-57247926 | None:intergenic | 45.0% |
| TATTGCCTAGATTGCTGTCG+TGG | - | chr7_2:57248010-57248029 | Msa1064560:intron | 45.0% | |
| !! | TTTGGCTGACAAAAGCATCG+AGG | - | chr7_2:57248470-57248489 | Msa1064560:intron | 45.0% |
| !! | TTGGCTGACAAAAGCATCGA+GGG | - | chr7_2:57248471-57248490 | Msa1064560:intron | 45.0% |
| !! | TGACAAAAGCATCGAGGGTT+AGG | - | chr7_2:57248476-57248495 | Msa1064560:intron | 45.0% |
| AAAGTTGGAGATAAGCGTCC+AGG | - | chr7_2:57248511-57248530 | Msa1064560:CDS | 45.0% | |
| GTAAACGTGCACCTTGATCA+TGG | - | chr7_2:57248915-57248934 | Msa1064560:intron | 45.0% | |
| AGAGAAGCCTTGAACAGAGT+AGG | - | chr7_2:57248960-57248979 | Msa1064560:intron | 45.0% | |
| GAGAAGCCTTGAACAGAGTA+GGG | - | chr7_2:57248961-57248980 | Msa1064560:intron | 45.0% | |
| TCTCAACCCTACTCTGTTCA+AGG | + | chr7_2:57248970-57248989 | None:intergenic | 45.0% | |
| CACATAGTAAGCCTGTTGAG+AGG | + | chr7_2:57249088-57249107 | None:intergenic | 45.0% | |
| TGAAACAGCCCAATCCATCA+CGG | - | chr7_2:57249106-57249125 | Msa1064560:intron | 45.0% | |
| TAATTAGAAACGGGCCGTGA+TGG | + | chr7_2:57249123-57249142 | None:intergenic | 45.0% | |
| ATGGGGCAGTAAGTAGAAAC+GGG | - | chr7_2:57249215-57249234 | Msa1064560:intron | 45.0% | |
| TCTCAACCCATGTCTGTTCA+TGG | - | chr7_2:57249385-57249404 | Msa1064560:intron | 45.0% | |
| GAGAAGCCATGAACAGACAT+GGG | + | chr7_2:57249394-57249413 | None:intergenic | 45.0% | |
| AGAGAAGCCATGAACAGACA+TGG | + | chr7_2:57249395-57249414 | None:intergenic | 45.0% | |
| CATGCATGAGATTCAAGGCA+AGG | + | chr7_2:57249893-57249912 | None:intergenic | 45.0% | |
| CTTGCCTTGAATCTCATGCA+TGG | - | chr7_2:57249891-57249910 | Msa1064560:intron | 45.0% | |
| GCTTCTTCATAGCCACCATA+TGG | - | chr7_2:57250829-57250848 | Msa1064560:intron | 45.0% | |
| !! | AATAAAAAGATATTTATTAA+TGG | - | chr7_2:57249196-57249215 | Msa1064560:intron | 5.0% |
| !! | ATAAAAAGATATTTATTAAT+GGG | - | chr7_2:57249197-57249216 | Msa1064560:intron | 5.0% |
| ! | AACGGGCGTTTTCCTCTATC+TGG | - | chr7_2:57246341-57246360 | Msa1064560:intron | 50.0% |
| ! | ACGGGCGTTTTCCTCTATCT+GGG | - | chr7_2:57246342-57246361 | Msa1064560:intron | 50.0% |
| ACTCTTAGGGAGGCTAAAGC+TGG | - | chr7_2:57246401-57246420 | Msa1064560:intron | 50.0% | |
| ! | ATGTCGGTGCTTTGCTTCCT+AGG | + | chr7_2:57246690-57246709 | None:intergenic | 50.0% |
| CTACGTGTCAGTGTCATGTC+TGG | + | chr7_2:57246724-57246743 | None:intergenic | 50.0% | |
| TCGCAACACAACTGCAATCG+AGG | + | chr7_2:57246970-57246989 | None:intergenic | 50.0% | |
| ! | CAATACCAAGCATCGCAACG+TGG | + | chr7_2:57247323-57247342 | None:intergenic | 50.0% |
| TCGCAACACAACCGCAATCA+AGG | + | chr7_2:57247368-57247387 | None:intergenic | 50.0% | |
| ! | ATGCTGAGTTGGGGATGAGA+TGG | - | chr7_2:57247656-57247675 | Msa1064560:intron | 50.0% |
| ! | TGCTGAGTTGGGGATGAGAT+GGG | - | chr7_2:57247657-57247676 | Msa1064560:intron | 50.0% |
| AGAAGATGGAGAGGCAGAAG+CGG | + | chr7_2:57247725-57247744 | None:intergenic | 50.0% | |
| !! | ATAGCGTAGCGGGCAAATAG+AGG | + | chr7_2:57247897-57247916 | None:intergenic | 50.0% |
| AAGGTCCACGACAGCAATCT+AGG | + | chr7_2:57248018-57248037 | None:intergenic | 50.0% | |
| CGAGGGTTAGGTCTTCAGTT+TGG | - | chr7_2:57248488-57248507 | Msa1064560:intron | 50.0% | |
| ACGTGCACCTTGATCATGGA+TGG | - | chr7_2:57248919-57248938 | Msa1064560:intron | 50.0% | |
| TAAGTAGAAACGGGCCGTGA+TGG | - | chr7_2:57249224-57249243 | Msa1064560:intron | 50.0% | |
| AAGTAGAAACGGGCCGTGAT+GGG | - | chr7_2:57249225-57249244 | Msa1064560:intron | 50.0% | |
| AGAAACAGCCCAACCCATCA+CGG | + | chr7_2:57249241-57249260 | None:intergenic | 50.0% | |
| ACTCGTTTCGTTTGTCTGGC+TGG | - | chr7_2:57251134-57251153 | Msa1064560:five_prime_UTR | 50.0% | |
| ! | CGGGCGTTTTCCTCTATCTG+GGG | - | chr7_2:57246343-57246362 | Msa1064560:intron | 55.0% |
| TCTGCCACAACCCCAGATAG+AGG | + | chr7_2:57246356-57246375 | None:intergenic | 55.0% | |
| TTGCGGTTGTGTTGCGATCG+TGG | - | chr7_2:57247371-57247390 | Msa1064560:intron | 55.0% | |
| ATGGAGAGGGACCTCTCAAC+AGG | - | chr7_2:57249074-57249093 | Msa1064560:intron | 55.0% | |
| !! | GAAACGGGCCGTGATGGATT+GGG | + | chr7_2:57249117-57249136 | None:intergenic | 55.0% |
| !! | AGAAACGGGCCGTGATGGAT+TGG | + | chr7_2:57249118-57249137 | None:intergenic | 55.0% |
| TTGGGATCACGGTGACTCCA+TGG | - | chr7_2:57250481-57250500 | Msa1064560:intron | 55.0% | |
| !! | CGTTTGTCTGGCTGGCTTCA+TGG | - | chr7_2:57251142-57251161 | Msa1064560:five_prime_UTR | 55.0% |
| CATGGCCACGTTGCGATGCT+TGG | - | chr7_2:57247315-57247334 | Msa1064560:intron | 60.0% | |
| !! | AGAAACGGGCCGTGATGGGT+TGG | - | chr7_2:57249229-57249248 | Msa1064560:intron | 60.0% |
| !! | GAAACGGGCCGTGATGGGTT+GGG | - | chr7_2:57249230-57249249 | Msa1064560:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 57245871 | 57251172 | 57245871 | ID=Msa1064560;Name=Msa1064560 |
| chr7_2 | mRNA | 57245871 | 57251172 | 57245871 | ID=Msa1064560-mRNA-1;Parent=Msa1064560;Name=Msa1064560-mRNA-1;_AED=0.00;_eAED=0.00;_QI=330|1|1|1|0.4|0.16|6|404|100 |
| chr7_2 | exon | 57245871 | 57246237 | 57245871 | ID=Msa1064560-mRNA-1:exon:10851;Parent=Msa1064560-mRNA-1 |
| chr7_2 | exon | 57248336 | 57248422 | 57248336 | ID=Msa1064560-mRNA-1:exon:10850;Parent=Msa1064560-mRNA-1 |
| chr7_2 | exon | 57248511 | 57248580 | 57248511 | ID=Msa1064560-mRNA-1:exon:10849;Parent=Msa1064560-mRNA-1 |
| chr7_2 | exon | 57250547 | 57250791 | 57250547 | ID=Msa1064560-mRNA-1:exon:10848;Parent=Msa1064560-mRNA-1 |
| chr7_2 | exon | 57250874 | 57251102 | 57250874 | ID=Msa1064560-mRNA-1:exon:10847;Parent=Msa1064560-mRNA-1 |
| chr7_2 | exon | 57251134 | 57251172 | 57251134 | ID=Msa1064560-mRNA-1:exon:10846;Parent=Msa1064560-mRNA-1 |
| chr7_2 | five_prime_UTR | 57251134 | 57251172 | 57251134 | ID=Msa1064560-mRNA-1:five_prime_utr;Parent=Msa1064560-mRNA-1 |
| chr7_2 | five_prime_UTR | 57250874 | 57251102 | 57250874 | ID=Msa1064560-mRNA-1:five_prime_utr;Parent=Msa1064560-mRNA-1 |
| chr7_2 | five_prime_UTR | 57250730 | 57250791 | 57250730 | ID=Msa1064560-mRNA-1:five_prime_utr;Parent=Msa1064560-mRNA-1 |
| chr7_2 | CDS | 57250547 | 57250729 | 57250547 | ID=Msa1064560-mRNA-1:cds;Parent=Msa1064560-mRNA-1 |
| chr7_2 | CDS | 57248511 | 57248580 | 57248511 | ID=Msa1064560-mRNA-1:cds;Parent=Msa1064560-mRNA-1 |
| chr7_2 | CDS | 57248373 | 57248422 | 57248373 | ID=Msa1064560-mRNA-1:cds;Parent=Msa1064560-mRNA-1 |
| chr7_2 | three_prime_UTR | 57248336 | 57248372 | 57248336 | ID=Msa1064560-mRNA-1:three_prime_utr;Parent=Msa1064560-mRNA-1 |
| chr7_2 | three_prime_UTR | 57245871 | 57246237 | 57245871 | ID=Msa1064560-mRNA-1:three_prime_utr;Parent=Msa1064560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
