Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077540 | XP_003590834.1 | 98.515 | 202 | 3 | 0 | 1 | 202 | 1 | 202 | 2.38e-147 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077540 | sp|O22797|GLTP1_ARATH | 74.257 | 202 | 52 | 0 | 1 | 202 | 1 | 202 | 2.30e-115 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077540 | B7FNC0 | 98.515 | 202 | 3 | 0 | 1 | 202 | 1 | 202 | 1.14e-147 | 417 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0077540 | 0.811431 | 7.025655e-51 | -8.615850e-47 |
| Msa0007850 | Msa0077540 | 0.801542 | 8.571400e-49 | -8.615850e-47 |
| Msa0008840 | Msa0077540 | 0.809525 | 1.812495e-50 | -8.615850e-47 |
| Msa0012940 | Msa0077540 | 0.853137 | 2.914432e-61 | -8.615850e-47 |
| Msa0014830 | Msa0077540 | 0.844847 | 5.864608e-59 | -8.615850e-47 |
| Msa0018620 | Msa0077540 | 0.805354 | 1.390342e-49 | -8.615850e-47 |
| Msa0026660 | Msa0077540 | 0.825396 | 4.794873e-54 | -8.615850e-47 |
| Msa0027320 | Msa0077540 | 0.806050 | 9.929382e-50 | -8.615850e-47 |
| Msa0029260 | Msa0077540 | 0.823082 | 1.677705e-53 | -8.615850e-47 |
| Msa0031820 | Msa0077540 | 0.820302 | 7.369959e-53 | -8.615850e-47 |
| Msa0033880 | Msa0077540 | 0.873204 | 1.762058e-67 | -8.615850e-47 |
| Msa0035120 | Msa0077540 | 0.824718 | 6.932788e-54 | -8.615850e-47 |
| Msa0035130 | Msa0077540 | 0.815890 | 7.331124e-52 | -8.615850e-47 |
| Msa0039250 | Msa0077540 | 0.800260 | 1.566487e-48 | -8.615850e-47 |
| Msa0041690 | Msa0077540 | 0.838593 | 2.622584e-57 | -8.615850e-47 |
| Msa0047250 | Msa0077540 | 0.814827 | 1.263434e-51 | -8.615850e-47 |
| Msa0047640 | Msa0077540 | 0.818205 | 2.213400e-52 | -8.615850e-47 |
| Msa0049780 | Msa0077540 | 0.832410 | 9.603124e-56 | -8.615850e-47 |
| Msa0053700 | Msa0077540 | 0.801453 | 8.942014e-49 | -8.615850e-47 |
| Msa0057750 | Msa0077540 | 0.802384 | 5.755928e-49 | -8.615850e-47 |
| Msa0065010 | Msa0077540 | 0.840242 | 9.785495e-58 | -8.615850e-47 |
| Msa0065550 | Msa0077540 | 0.807717 | 4.409242e-50 | -8.615850e-47 |
| Msa0069600 | Msa0077540 | 0.808517 | 2.978847e-50 | -8.615850e-47 |
| Msa0070430 | Msa0077540 | 0.812869 | 3.411607e-51 | -8.615850e-47 |
| Msa0074750 | Msa0077540 | 0.856190 | 3.803297e-62 | -8.615850e-47 |
| Msa0077540 | Msa0077900 | 0.816085 | 6.631211e-52 | -8.615850e-47 |
| Msa0077540 | Msa0081650 | 0.839330 | 1.690401e-57 | -8.615850e-47 |
| Msa0077540 | Msa0090660 | 0.803292 | 3.737925e-49 | -8.615850e-47 |
| Msa0077540 | Msa0092170 | 0.800454 | 1.430300e-48 | -8.615850e-47 |
| Msa0077540 | Msa0093010 | 0.813418 | 2.585937e-51 | -8.615850e-47 |
| Msa0077540 | Msa0097950 | 0.805894 | 1.070942e-49 | -8.615850e-47 |
| Msa0077540 | Msa0100800 | 0.833898 | 4.093203e-56 | -8.615850e-47 |
| Msa0077540 | Msa0101180 | 0.824497 | 7.816772e-54 | -8.615850e-47 |
| Msa0077540 | Msa0103070 | 0.800817 | 1.206169e-48 | -8.615850e-47 |
| Msa0077540 | Msa0108870 | 0.805173 | 1.516647e-49 | -8.615850e-47 |
| Msa0077540 | Msa0115370 | 0.820463 | 6.768485e-53 | -8.615850e-47 |
| Msa0077540 | Msa0116790 | 0.807020 | 6.198734e-50 | -8.615850e-47 |
| Msa0077540 | Msa0119900 | 0.801154 | 1.029166e-48 | -8.615850e-47 |
| Msa0077540 | Msa0121820 | 0.823711 | 1.195457e-53 | -8.615850e-47 |
| Msa0077540 | Msa0126770 | 0.840065 | 1.087960e-57 | -8.615850e-47 |
| Msa0077540 | Msa0126840 | 0.819218 | 1.303800e-52 | -8.615850e-47 |
| Msa0077540 | Msa0126880 | 0.840750 | 7.202282e-58 | -8.615850e-47 |
| Msa0077540 | Msa0127040 | 0.831352 | 1.752195e-55 | -8.615850e-47 |
| Msa0077540 | Msa0127850 | 0.870442 | 1.454626e-66 | -8.615850e-47 |
| Msa0077540 | Msa0131450 | 0.813356 | 2.667958e-51 | -8.615850e-47 |
| Msa0077540 | Msa0133820 | 0.800684 | 1.284027e-48 | -8.615850e-47 |
| Msa0077540 | Msa0136120 | 0.802253 | 6.125454e-49 | -8.615850e-47 |
| Msa0077540 | Msa0138360 | 0.828519 | 8.595935e-55 | -8.615850e-47 |
| Msa0077540 | Msa0141400 | 0.810811 | 9.575217e-51 | -8.615850e-47 |
| Msa0077540 | Msa0144360 | 0.806399 | 8.383894e-50 | -8.615850e-47 |
| Msa0077540 | Msa0145150 | 0.829870 | 4.041037e-55 | -8.615850e-47 |
| Msa0077540 | Msa0146080 | 0.839734 | 1.327143e-57 | -8.615850e-47 |
| Msa0077540 | Msa0147980 | 0.836749 | 7.796347e-57 | -8.615850e-47 |
| Msa0077540 | Msa0166750 | 0.835335 | 1.781817e-56 | -8.615850e-47 |
| Msa0077540 | Msa0168940 | 0.817867 | 2.638505e-52 | -8.615850e-47 |
| Msa0077540 | Msa0169300 | 0.819822 | 9.490746e-53 | -8.615850e-47 |
| Msa0077540 | Msa0171850 | 0.844286 | 8.306803e-59 | -8.615850e-47 |
| Msa0077540 | Msa0171980 | 0.828391 | 9.225730e-55 | -8.615850e-47 |
| Msa0077540 | Msa0174000 | 0.887328 | 1.571952e-72 | -8.615850e-47 |
| Msa0077540 | Msa0181230 | 0.803633 | 3.175740e-49 | -8.615850e-47 |
| Msa0077540 | Msa0188350 | 0.806479 | 8.063568e-50 | -8.615850e-47 |
| Msa0077540 | Msa0193600 | 0.816315 | 5.893291e-52 | -8.615850e-47 |
| Msa0077540 | Msa0194560 | 0.805414 | 1.350371e-49 | -8.615850e-47 |
| Msa0077540 | Msa0197520 | 0.820101 | 8.195413e-53 | -8.615850e-47 |
| Msa0077540 | Msa0197780 | 0.819471 | 1.141349e-52 | -8.615850e-47 |
| Msa0077540 | Msa0198530 | 0.809877 | 1.523062e-50 | -8.615850e-47 |
| Msa0077540 | Msa0221600 | 0.800115 | 1.677116e-48 | -8.615850e-47 |
| Msa0077540 | Msa0225670 | 0.823743 | 1.175329e-53 | -8.615850e-47 |
| Msa0077540 | Msa0229360 | 0.845248 | 4.571609e-59 | -8.615850e-47 |
| Msa0077540 | Msa0230150 | 0.804499 | 2.097785e-49 | -8.615850e-47 |
| Msa0077540 | Msa0241830 | 0.834714 | 2.554926e-56 | -8.615850e-47 |
| Msa0077540 | Msa0244380 | 0.820309 | 7.340620e-53 | -8.615850e-47 |
| Msa0077540 | Msa0244980 | 0.835713 | 1.429885e-56 | -8.615850e-47 |
| Msa0077540 | Msa0245580 | 0.821493 | 3.920377e-53 | -8.615850e-47 |
| Msa0077540 | Msa0247060 | 0.812102 | 5.020402e-51 | -8.615850e-47 |
| Msa0077540 | Msa0249580 | 0.800502 | 1.398398e-48 | -8.615850e-47 |
| Msa0077540 | Msa0251770 | 0.800815 | 1.207169e-48 | -8.615850e-47 |
| Msa0077540 | Msa0262480 | 0.855728 | 5.192379e-62 | -8.615850e-47 |
| Msa0077540 | Msa0269470 | 0.823157 | 1.610960e-53 | -8.615850e-47 |
| Msa0077540 | Msa0273650 | 0.819124 | 1.369072e-52 | -8.615850e-47 |
| Msa0077540 | Msa0274100 | 0.800027 | 1.747079e-48 | -8.615850e-47 |
| Msa0077540 | Msa0279850 | 0.857418 | 1.654444e-62 | -8.615850e-47 |
| Msa0077540 | Msa0282890 | 0.807885 | 4.062167e-50 | -8.615850e-47 |
| Msa0077540 | Msa0283420 | 0.815046 | 1.129652e-51 | -8.615850e-47 |
| Msa0077540 | Msa0291520 | 0.822477 | 2.319859e-53 | -8.615850e-47 |
| Msa0077540 | Msa0296250 | 0.807233 | 5.587759e-50 | -8.615850e-47 |
| Msa0077540 | Msa0300350 | 0.822721 | 2.035360e-53 | -8.615850e-47 |
| Msa0077540 | Msa0304100 | 0.800045 | 1.732722e-48 | -8.615850e-47 |
| Msa0077540 | Msa0313930 | 0.820585 | 6.345234e-53 | -8.615850e-47 |
| Msa0077540 | Msa0321190 | 0.809307 | 2.019154e-50 | -8.615850e-47 |
| Msa0077540 | Msa0322900 | 0.854204 | 1.438211e-61 | -8.615850e-47 |
| Msa0077540 | Msa0333160 | 0.819151 | 1.350185e-52 | -8.615850e-47 |
| Msa0077540 | Msa0337510 | 0.832823 | 7.587160e-56 | -8.615850e-47 |
| Msa0077540 | Msa0341690 | 0.807113 | 5.923483e-50 | -8.615850e-47 |
| Msa0077540 | Msa0343190 | 0.808949 | 2.408334e-50 | -8.615850e-47 |
| Msa0077540 | Msa0346990 | 0.809526 | 1.811931e-50 | -8.615850e-47 |
| Msa0077540 | Msa0358400 | 0.818655 | 1.750561e-52 | -8.615850e-47 |
| Msa0077540 | Msa0363060 | 0.809822 | 1.564767e-50 | -8.615850e-47 |
| Msa0077540 | Msa0365860 | 0.801444 | 8.977586e-49 | -8.615850e-47 |
| Msa0077540 | Msa0370160 | -0.813367 | 2.652702e-51 | -8.615850e-47 |
| Msa0077540 | Msa0372420 | 0.800727 | 1.258087e-48 | -8.615850e-47 |
| Msa0077540 | Msa0372490 | 0.822092 | 2.850416e-53 | -8.615850e-47 |
| Msa0077540 | Msa0376280 | 0.802719 | 4.910118e-49 | -8.615850e-47 |
| Msa0077540 | Msa0378970 | 0.803971 | 2.702632e-49 | -8.615850e-47 |
| Msa0077540 | Msa0382400 | 0.833842 | 4.226476e-56 | -8.615850e-47 |
| Msa0077540 | Msa0384670 | 0.853414 | 2.427267e-61 | -8.615850e-47 |
| Msa0077540 | Msa0384880 | 0.838677 | 2.494208e-57 | -8.615850e-47 |
| Msa0077540 | Msa0387880 | -0.831485 | 1.625682e-55 | -8.615850e-47 |
| Msa0077540 | Msa0389510 | 0.800824 | 1.202035e-48 | -8.615850e-47 |
| Msa0077540 | Msa0392200 | 0.810006 | 1.428476e-50 | -8.615850e-47 |
| Msa0077540 | Msa0394690 | 0.807785 | 4.264926e-50 | -8.615850e-47 |
| Msa0077540 | Msa0410870 | 0.815354 | 9.653231e-52 | -8.615850e-47 |
| Msa0077540 | Msa0414020 | 0.811035 | 8.563242e-51 | -8.615850e-47 |
| Msa0077540 | Msa0421300 | -0.800575 | 1.351428e-48 | -8.615850e-47 |
| Msa0077540 | Msa0431770 | 0.837857 | 4.059152e-57 | -8.615850e-47 |
| Msa0077540 | Msa0432070 | 0.814181 | 1.755852e-51 | -8.615850e-47 |
| Msa0077540 | Msa0433750 | 0.842360 | 2.711809e-58 | -8.615850e-47 |
| Msa0077540 | Msa0434570 | 0.852761 | 3.734680e-61 | -8.615850e-47 |
| Msa0077540 | Msa0434770 | 0.857118 | 2.028657e-62 | -8.615850e-47 |
| Msa0077540 | Msa0436200 | 0.850234 | 1.936986e-60 | -8.615850e-47 |
| Msa0077540 | Msa0439230 | 0.806781 | 6.961238e-50 | -8.615850e-47 |
| Msa0077540 | Msa0439890 | 0.810789 | 9.677901e-51 | -8.615850e-47 |
| Msa0077540 | Msa0442310 | 0.802341 | 5.874718e-49 | -8.615850e-47 |
| Msa0077540 | Msa0461590 | 0.805314 | 1.417363e-49 | -8.615850e-47 |
| Msa0077540 | Msa0462880 | 0.887557 | 1.285290e-72 | -8.615850e-47 |
| Msa0077540 | Msa0468250 | 0.801346 | 9.403862e-49 | -8.615850e-47 |
| Msa0077540 | Msa0474700 | 0.803170 | 3.962010e-49 | -8.615850e-47 |
| Msa0077540 | Msa0478580 | 0.860884 | 1.512322e-63 | -8.615850e-47 |
| Msa0077540 | Msa0479200 | 0.804146 | 2.485287e-49 | -8.615850e-47 |
| Msa0077540 | Msa0479330 | 0.804107 | 2.532212e-49 | -8.615850e-47 |
| Msa0077540 | Msa0483740 | 0.825768 | 3.915749e-54 | -8.615850e-47 |
| Msa0077540 | Msa0485240 | 0.805955 | 1.039420e-49 | -8.615850e-47 |
| Msa0077540 | Msa0510290 | 0.863576 | 2.256380e-64 | -8.615850e-47 |
| Msa0077540 | Msa0511770 | 0.808650 | 2.789914e-50 | -8.615850e-47 |
| Msa0077540 | Msa0512850 | 0.808118 | 3.623865e-50 | -8.615850e-47 |
| Msa0077540 | Msa0516120 | 0.837419 | 5.254934e-57 | -8.615850e-47 |
| Msa0077540 | Msa0518030 | 0.840738 | 7.257229e-58 | -8.615850e-47 |
| Msa0077540 | Msa0518960 | 0.856685 | 2.721265e-62 | -8.615850e-47 |
| Msa0077540 | Msa0524590 | 0.829163 | 6.001180e-55 | -8.615850e-47 |
| Msa0077540 | Msa0526540 | 0.802130 | 6.490462e-49 | -8.615850e-47 |
| Msa0077540 | Msa0527190 | 0.811409 | 7.103477e-51 | -8.615850e-47 |
| Msa0077540 | Msa0531250 | 0.857531 | 1.531480e-62 | -8.615850e-47 |
| Msa0077540 | Msa0533960 | -0.806712 | 7.198944e-50 | -8.615850e-47 |
| Msa0077540 | Msa0547990 | 0.841613 | 4.272530e-58 | -8.615850e-47 |
| Msa0077540 | Msa0549590 | 0.810103 | 1.361391e-50 | -8.615850e-47 |
| Msa0077540 | Msa0549790 | 0.823873 | 1.095876e-53 | -8.615850e-47 |
| Msa0077540 | Msa0550570 | 0.818700 | 1.709906e-52 | -8.615850e-47 |
| Msa0077540 | Msa0560500 | 0.815366 | 9.591178e-52 | -8.615850e-47 |
| Msa0077540 | Msa0561430 | 0.823004 | 1.749211e-53 | -8.615850e-47 |
| Msa0077540 | Msa0576680 | 0.801313 | 9.550167e-49 | -8.615850e-47 |
| Msa0077540 | Msa0578090 | 0.846569 | 2.000158e-59 | -8.615850e-47 |
| Msa0077540 | Msa0581070 | 0.804929 | 1.706371e-49 | -8.615850e-47 |
| Msa0077540 | Msa0581690 | 0.822720 | 2.036734e-53 | -8.615850e-47 |
| Msa0077540 | Msa0583500 | 0.837661 | 4.556555e-57 | -8.615850e-47 |
| Msa0077540 | Msa0584550 | 0.816302 | 5.930225e-52 | -8.615850e-47 |
| Msa0077540 | Msa0586850 | 0.815417 | 9.345162e-52 | -8.615850e-47 |
| Msa0077540 | Msa0588090 | 0.833624 | 4.791045e-56 | -8.615850e-47 |
| Msa0077540 | Msa0593700 | 0.812040 | 5.178366e-51 | -8.615850e-47 |
| Msa0077540 | Msa0594200 | 0.807885 | 4.061389e-50 | -8.615850e-47 |
| Msa0077540 | Msa0597000 | 0.820012 | 8.588038e-53 | -8.615850e-47 |
| Msa0077540 | Msa0599900 | 0.838410 | 2.923199e-57 | -8.615850e-47 |
| Msa0077540 | Msa0609220 | 0.826143 | 3.188375e-54 | -8.615850e-47 |
| Msa0077540 | Msa0610090 | 0.821353 | 4.223677e-53 | -8.615850e-47 |
| Msa0077540 | Msa0610390 | 0.803694 | 3.084654e-49 | -8.615850e-47 |
| Msa0077540 | Msa0614510 | 0.830019 | 3.717643e-55 | -8.615850e-47 |
| Msa0077540 | Msa0615680 | 0.806406 | 8.355925e-50 | -8.615850e-47 |
| Msa0077540 | Msa0618950 | 0.822825 | 1.925742e-53 | -8.615850e-47 |
| Msa0077540 | Msa0619420 | 0.816206 | 6.232015e-52 | -8.615850e-47 |
| Msa0077540 | Msa0619860 | 0.815095 | 1.101643e-51 | -8.615850e-47 |
| Msa0077540 | Msa0620620 | 0.807039 | 6.141937e-50 | -8.615850e-47 |
| Msa0077540 | Msa0625790 | 0.800342 | 1.507521e-48 | -8.615850e-47 |
| Msa0077540 | Msa0626940 | 0.813053 | 3.110307e-51 | -8.615850e-47 |
| Msa0077540 | Msa0628420 | 0.852301 | 5.050326e-61 | -8.615850e-47 |
| Msa0077540 | Msa0640500 | 0.807977 | 3.882714e-50 | -8.615850e-47 |
| Msa0077540 | Msa0644030 | 0.804104 | 2.535270e-49 | -8.615850e-47 |
| Msa0077540 | Msa0646130 | 0.840279 | 9.565807e-58 | -8.615850e-47 |
| Msa0077540 | Msa0647430 | 0.820442 | 6.845484e-53 | -8.615850e-47 |
| Msa0077540 | Msa0654870 | 0.818879 | 1.556848e-52 | -8.615850e-47 |
| Msa0077540 | Msa0658480 | 0.834132 | 3.576972e-56 | -8.615850e-47 |
| Msa0077540 | Msa0659550 | 0.832373 | 9.810847e-56 | -8.615850e-47 |
| Msa0077540 | Msa0659990 | 0.803248 | 3.817283e-49 | -8.615850e-47 |
| Msa0077540 | Msa0662630 | 0.824891 | 6.311863e-54 | -8.615850e-47 |
| Msa0077540 | Msa0664760 | 0.817626 | 2.991242e-52 | -8.615850e-47 |
| Msa0077540 | Msa0666230 | 0.819355 | 1.213219e-52 | -8.615850e-47 |
| Msa0077540 | Msa0669760 | 0.808528 | 2.963472e-50 | -8.615850e-47 |
| Msa0077540 | Msa0679100 | 0.821314 | 4.311639e-53 | -8.615850e-47 |
| Msa0077540 | Msa0685760 | 0.824407 | 8.210386e-54 | -8.615850e-47 |
| Msa0077540 | Msa0687230 | 0.806151 | 9.456206e-50 | -8.615850e-47 |
| Msa0077540 | Msa0689420 | 0.802031 | 6.804132e-49 | -8.615850e-47 |
| Msa0077540 | Msa0689630 | -0.813313 | 2.726375e-51 | -8.615850e-47 |
| Msa0077540 | Msa0689760 | 0.806262 | 8.961418e-50 | -8.615850e-47 |
| Msa0077540 | Msa0697720 | 0.803896 | 2.800468e-49 | -8.615850e-47 |
| Msa0077540 | Msa0699780 | 0.801062 | 1.074697e-48 | -8.615850e-47 |
| Msa0077540 | Msa0705040 | 0.803459 | 3.450850e-49 | -8.615850e-47 |
| Msa0077540 | Msa0705390 | 0.822998 | 1.754284e-53 | -8.615850e-47 |
| Msa0077540 | Msa0706390 | 0.820608 | 6.269622e-53 | -8.615850e-47 |
| Msa0077540 | Msa0707390 | 0.804855 | 1.768171e-49 | -8.615850e-47 |
| Msa0077540 | Msa0716410 | 0.815753 | 7.866554e-52 | -8.615850e-47 |
| Msa0077540 | Msa0716860 | 0.830928 | 2.227673e-55 | -8.615850e-47 |
| Msa0077540 | Msa0720370 | 0.819431 | 1.165525e-52 | -8.615850e-47 |
| Msa0077540 | Msa0739080 | 0.807411 | 5.120692e-50 | -8.615850e-47 |
| Msa0077540 | Msa0742510 | 0.839532 | 1.497465e-57 | -8.615850e-47 |
| Msa0077540 | Msa0743530 | 0.857406 | 1.668695e-62 | -8.615850e-47 |
| Msa0077540 | Msa0744090 | 0.827277 | 1.709999e-54 | -8.615850e-47 |
| Msa0077540 | Msa0744100 | 0.834957 | 2.219132e-56 | -8.615850e-47 |
| Msa0077540 | Msa0745200 | 0.809554 | 1.786943e-50 | -8.615850e-47 |
| Msa0077540 | Msa0749400 | 0.821725 | 3.465406e-53 | -8.615850e-47 |
| Msa0077540 | Msa0750920 | 0.809474 | 1.858438e-50 | -8.615850e-47 |
| Msa0077540 | Msa0756930 | 0.831680 | 1.455253e-55 | -8.615850e-47 |
| Msa0077540 | Msa0757800 | 0.822961 | 1.790225e-53 | -8.615850e-47 |
| Msa0077540 | Msa0766670 | 0.846478 | 2.117669e-59 | -8.615850e-47 |
| Msa0077540 | Msa0779260 | 0.807403 | 5.141596e-50 | -8.615850e-47 |
| Msa0077540 | Msa0779550 | 0.830586 | 2.701244e-55 | -8.615850e-47 |
| Msa0077540 | Msa0781270 | 0.803367 | 3.606709e-49 | -8.615850e-47 |
| Msa0077540 | Msa0788120 | 0.825287 | 5.089845e-54 | -8.615850e-47 |
| Msa0077540 | Msa0789560 | 0.800682 | 1.285167e-48 | -8.615850e-47 |
| Msa0077540 | Msa0794050 | 0.803277 | 3.764933e-49 | -8.615850e-47 |
| Msa0077540 | Msa0797930 | 0.816406 | 5.620663e-52 | -8.615850e-47 |
| Msa0077540 | Msa0799000 | 0.833864 | 4.174682e-56 | -8.615850e-47 |
| Msa0077540 | Msa0804250 | 0.811653 | 6.286005e-51 | -8.615850e-47 |
| Msa0077540 | Msa0814250 | 0.823179 | 1.592392e-53 | -8.615850e-47 |
| Msa0077540 | Msa0818770 | 0.833011 | 6.812263e-56 | -8.615850e-47 |
| Msa0077540 | Msa0819540 | 0.843413 | 1.422914e-58 | -8.615850e-47 |
| Msa0077540 | Msa0822170 | 0.852610 | 4.124704e-61 | -8.615850e-47 |
| Msa0077540 | Msa0822180 | 0.820466 | 6.759482e-53 | -8.615850e-47 |
| Msa0077540 | Msa0825270 | 0.843793 | 1.125880e-58 | -8.615850e-47 |
| Msa0077540 | Msa0825280 | 0.830478 | 2.870732e-55 | -8.615850e-47 |
| Msa0077540 | Msa0826510 | 0.810422 | 1.162144e-50 | -8.615850e-47 |
| Msa0077540 | Msa0826760 | 0.810399 | 1.175313e-50 | -8.615850e-47 |
| Msa0077540 | Msa0836500 | 0.800510 | 1.393613e-48 | -8.615850e-47 |
| Msa0077540 | Msa0837410 | 0.811238 | 7.738325e-51 | -8.615850e-47 |
| Msa0077540 | Msa0846400 | 0.807742 | 4.356528e-50 | -8.615850e-47 |
| Msa0077540 | Msa0851470 | 0.826239 | 3.025498e-54 | -8.615850e-47 |
| Msa0077540 | Msa0858440 | 0.806088 | 9.749261e-50 | -8.615850e-47 |
| Msa0077540 | Msa0862650 | 0.810624 | 1.051022e-50 | -8.615850e-47 |
| Msa0077540 | Msa0864420 | 0.812751 | 3.620386e-51 | -8.615850e-47 |
| Msa0077540 | Msa0865570 | 0.837665 | 4.546395e-57 | -8.615850e-47 |
| Msa0077540 | Msa0865620 | 0.805299 | 1.427286e-49 | -8.615850e-47 |
| Msa0077540 | Msa0869010 | 0.822175 | 2.726730e-53 | -8.615850e-47 |
| Msa0077540 | Msa0879850 | 0.832939 | 7.098100e-56 | -8.615850e-47 |
| Msa0077540 | Msa0880040 | 0.803200 | 3.905355e-49 | -8.615850e-47 |
| Msa0077540 | Msa0888940 | 0.856048 | 4.186401e-62 | -8.615850e-47 |
| Msa0077540 | Msa0898760 | 0.814752 | 1.313104e-51 | -8.615850e-47 |
| Msa0077540 | Msa0903780 | 0.819506 | 1.120525e-52 | -8.615850e-47 |
| Msa0077540 | Msa0921870 | 0.801834 | 7.468519e-49 | -8.615850e-47 |
| Msa0077540 | Msa0928120 | 0.866033 | 3.832264e-65 | -8.615850e-47 |
| Msa0077540 | Msa0943170 | 0.845151 | 4.856119e-59 | -8.615850e-47 |
| Msa0077540 | Msa0943270 | 0.838769 | 2.361446e-57 | -8.615850e-47 |
| Msa0077540 | Msa0944660 | 0.822779 | 1.973129e-53 | -8.615850e-47 |
| Msa0077540 | Msa0947530 | -0.800546 | 1.369929e-48 | -8.615850e-47 |
| Msa0077540 | Msa0960830 | 0.823026 | 1.728382e-53 | -8.615850e-47 |
| Msa0077540 | Msa0963020 | 0.831131 | 1.986138e-55 | -8.615850e-47 |
| Msa0077540 | Msa0980940 | 0.840157 | 1.029491e-57 | -8.615850e-47 |
| Msa0077540 | Msa0981430 | 0.801749 | 7.774709e-49 | -8.615850e-47 |
| Msa0077540 | Msa0997430 | 0.845001 | 5.330600e-59 | -8.615850e-47 |
| Msa0077540 | Msa1001350 | 0.805236 | 1.471273e-49 | -8.615850e-47 |
| Msa0077540 | Msa1004420 | 0.809718 | 1.647279e-50 | -8.615850e-47 |
| Msa0077540 | Msa1010460 | 0.823167 | 1.602261e-53 | -8.615850e-47 |
| Msa0077540 | Msa1025940 | 0.804472 | 2.125632e-49 | -8.615850e-47 |
| Msa0077540 | Msa1027250 | 0.839995 | 1.135027e-57 | -8.615850e-47 |
| Msa0077540 | Msa1027300 | 0.827934 | 1.188933e-54 | -8.615850e-47 |
| Msa0077540 | Msa1027360 | 0.838293 | 3.133682e-57 | -8.615850e-47 |
| Msa0077540 | Msa1029970 | 0.818215 | 2.201810e-52 | -8.615850e-47 |
| Msa0077540 | Msa1030930 | 0.842877 | 1.976710e-58 | -8.615850e-47 |
| Msa0077540 | Msa1033720 | 0.804882 | 1.744755e-49 | -8.615850e-47 |
| Msa0077540 | Msa1064560 | 0.814373 | 1.592601e-51 | -8.615850e-47 |
| Msa0077540 | Msa1068390 | 0.845208 | 4.687581e-59 | -8.615850e-47 |
| Msa0077540 | Msa1070050 | 0.836933 | 6.998040e-57 | -8.615850e-47 |
| Msa0077540 | Msa1070390 | 0.861515 | 9.717833e-64 | -8.615850e-47 |
| Msa0077540 | Msa1072600 | 0.820287 | 7.428984e-53 | -8.615850e-47 |
| Msa0077540 | Msa1073590 | 0.806394 | 8.404422e-50 | -8.615850e-47 |
| Msa0077540 | Msa1076560 | 0.819413 | 1.176884e-52 | -8.615850e-47 |
| Msa0077540 | Msa1079190 | 0.803591 | 3.239711e-49 | -8.615850e-47 |
| Msa0077540 | Msa1082290 | 0.803719 | 3.048677e-49 | -8.615850e-47 |
| Msa0077540 | Msa1083880 | 0.831353 | 1.751935e-55 | -8.615850e-47 |
| Msa0077540 | Msa1089270 | 0.807739 | 4.363297e-50 | -8.615850e-47 |
| Msa0077540 | Msa1089740 | -0.803712 | 3.057866e-49 | -8.615850e-47 |
| Msa0077540 | Msa1095790 | 0.801746 | 7.783969e-49 | -8.615850e-47 |
| Msa0077540 | Msa1098890 | 0.800569 | 1.355234e-48 | -8.615850e-47 |
| Msa0077540 | Msa1113590 | 0.803196 | 3.911689e-49 | -8.615850e-47 |
| Msa0077540 | Msa1113880 | 0.808477 | 3.038436e-50 | -8.615850e-47 |
| Msa0077540 | Msa1114040 | 0.808095 | 3.664212e-50 | -8.615850e-47 |
| Msa0077540 | Msa1123350 | 0.829250 | 5.716835e-55 | -8.615850e-47 |
| Msa0077540 | Msa1126850 | 0.810053 | 1.395311e-50 | -8.615850e-47 |
| Msa0077540 | Msa1127430 | 0.803406 | 3.539062e-49 | -8.615850e-47 |
| Msa0077540 | Msa1127540 | 0.836104 | 1.137581e-56 | -8.615850e-47 |
| Msa0077540 | Msa1127590 | 0.829017 | 6.511041e-55 | -8.615850e-47 |
| Msa0077540 | Msa1129690 | 0.814066 | 1.861516e-51 | -8.615850e-47 |
| Msa0077540 | Msa1131170 | 0.821584 | 3.735766e-53 | -8.615850e-47 |
| Msa0077540 | Msa1133540 | 0.813482 | 2.503215e-51 | -8.615850e-47 |
| Msa0077540 | Msa1145240 | 0.821530 | 3.844960e-53 | -8.615850e-47 |
| Msa0077540 | Msa1154490 | 0.829705 | 4.432694e-55 | -8.615850e-47 |
| Msa0077540 | Msa1158230 | 0.839015 | 2.039953e-57 | -8.615850e-47 |
| Msa0077540 | Msa1158770 | 0.802759 | 4.816921e-49 | -8.615850e-47 |
| Msa0077540 | Msa1166870 | 0.817436 | 3.300241e-52 | -8.615850e-47 |
| Msa0077540 | Msa1169080 | 0.820650 | 6.133303e-53 | -8.615850e-47 |
| Msa0077540 | Msa1169720 | 0.812905 | 3.350457e-51 | -8.615850e-47 |
| Msa0077540 | Msa1178050 | 0.808376 | 3.192214e-50 | -8.615850e-47 |
| Msa0077540 | Msa1181170 | -0.811263 | 7.641565e-51 | -8.615850e-47 |
| Msa0077540 | Msa1188560 | 0.834311 | 3.225693e-56 | -8.615850e-47 |
| Msa0077540 | Msa1199290 | 0.811291 | 7.535477e-51 | -8.615850e-47 |
| Msa0077540 | Msa1201640 | 0.840914 | 6.524312e-58 | -8.615850e-47 |
| Msa0077540 | Msa1201830 | 0.835130 | 2.006533e-56 | -8.615850e-47 |
| Msa0077540 | Msa1202580 | 0.847046 | 1.481508e-59 | -8.615850e-47 |
| Msa0077540 | Msa1205480 | 0.832232 | 1.063385e-55 | -8.615850e-47 |
| Msa0077540 | Msa1206650 | 0.835898 | 1.283474e-56 | -8.615850e-47 |
| Msa0077540 | Msa1207730 | 0.846679 | 1.866618e-59 | -8.615850e-47 |
| Msa0077540 | Msa1211340 | 0.829719 | 4.398412e-55 | -8.615850e-47 |
| Msa0077540 | Msa1214320 | 0.802642 | 5.092655e-49 | -8.615850e-47 |
| Msa0077540 | Msa1226610 | 0.803775 | 2.968012e-49 | -8.615850e-47 |
| Msa0077540 | Msa1227640 | 0.809704 | 1.659234e-50 | -8.615850e-47 |
| Msa0077540 | Msa1227690 | 0.822093 | 2.848500e-53 | -8.615850e-47 |
| Msa0077540 | Msa1228970 | 0.811202 | 7.875827e-51 | -8.615850e-47 |
| Msa0077540 | Msa1234980 | 0.803916 | 2.773595e-49 | -8.615850e-47 |
| Msa0077540 | Msa1253810 | 0.814913 | 1.209182e-51 | -8.615850e-47 |
| Msa0077540 | Msa1254620 | 0.802774 | 4.782479e-49 | -8.615850e-47 |
| Msa0077540 | Msa1254710 | 0.824743 | 6.841517e-54 | -8.615850e-47 |
| Msa0077540 | Msa1256770 | 0.806785 | 6.950596e-50 | -8.615850e-47 |
| Msa0077540 | Msa1259640 | 0.826035 | 3.383152e-54 | -8.615850e-47 |
| Msa0077540 | Msa1265590 | 0.803659 | 3.136148e-49 | -8.615850e-47 |
| Msa0077540 | Msa1276970 | 0.800901 | 1.159387e-48 | -8.615850e-47 |
| Msa0077540 | Msa1286510 | 0.810402 | 1.173456e-50 | -8.615850e-47 |
| Msa0077540 | Msa1293070 | 0.803937 | 2.746978e-49 | -8.615850e-47 |
| Msa0077540 | Msa1294840 | 0.817200 | 3.730411e-52 | -8.615850e-47 |
| Msa0077540 | Msa1294960 | 0.807987 | 3.863683e-50 | -8.615850e-47 |
| Msa0077540 | Msa1296300 | 0.809266 | 2.060243e-50 | -8.615850e-47 |
| Msa0077540 | Msa1304860 | 0.808682 | 2.746707e-50 | -8.615850e-47 |
| Msa0077540 | Msa1310690 | 0.830864 | 2.309967e-55 | -8.615850e-47 |
| Msa0077540 | Msa1323690 | 0.805574 | 1.250113e-49 | -8.615850e-47 |
| Msa0077540 | Msa1329450 | 0.801210 | 1.002429e-48 | -8.615850e-47 |
| Msa0077540 | Msa1329540 | 0.801772 | 7.691853e-49 | -8.615850e-47 |
| Msa0077540 | Msa1329790 | 0.834028 | 3.798813e-56 | -8.615850e-47 |
| Msa0077540 | Msa1330270 | 0.815809 | 7.640976e-52 | -8.615850e-47 |
| Msa0077540 | Msa1331280 | 0.812579 | 3.949014e-51 | -8.615850e-47 |
| Msa0077540 | Msa1340830 | 0.821682 | 3.545458e-53 | -8.615850e-47 |
| Msa0077540 | Msa1341070 | 0.813852 | 2.074891e-51 | -8.615850e-47 |
| Msa0077540 | Msa1342630 | 0.803777 | 2.965043e-49 | -8.615850e-47 |
| Msa0077540 | Msa1344310 | 0.847112 | 1.420907e-59 | -8.615850e-47 |
| Msa0077540 | Msa1344850 | 0.810666 | 1.028946e-50 | -8.615850e-47 |
| Msa0077540 | Msa1356610 | 0.813604 | 2.353032e-51 | -8.615850e-47 |
| Msa0077540 | Msa1362020 | 0.805575 | 1.249352e-49 | -8.615850e-47 |
| Msa0077540 | Msa1363860 | 0.804348 | 2.255057e-49 | -8.615850e-47 |
| Msa0077540 | Msa1364160 | 0.809131 | 2.202336e-50 | -8.615850e-47 |
| Msa0077540 | Msa1371520 | 0.811697 | 6.148755e-51 | -8.615850e-47 |
| Msa0077540 | Msa1372310 | 0.814750 | 1.313948e-51 | -8.615850e-47 |
| Msa0077540 | Msa1373820 | 0.834598 | 2.732211e-56 | -8.615850e-47 |
| Msa0077540 | Msa1380970 | 0.809563 | 1.779116e-50 | -8.615850e-47 |
| Msa0077540 | Msa1381650 | 0.836536 | 8.833479e-57 | -8.615850e-47 |
| Msa0077540 | Msa1385350 | 0.813358 | 2.664985e-51 | -8.615850e-47 |
| Msa0077540 | Msa1385810 | 0.811260 | 7.651187e-51 | -8.615850e-47 |
| Msa0077540 | Msa1393820 | 0.818621 | 1.781938e-52 | -8.615850e-47 |
| Msa0077540 | Msa1407970 | 0.808603 | 2.856025e-50 | -8.615850e-47 |
| Msa0077540 | Msa1409260 | 0.821408 | 4.102998e-53 | -8.615850e-47 |
| Msa0077540 | Msa1411950 | 0.876710 | 1.124080e-68 | -8.615850e-47 |
| Msa0077540 | Msa1416260 | 0.832462 | 9.324343e-56 | -8.615850e-47 |
| Msa0077540 | Msa1418240 | 0.806115 | 9.619227e-50 | -8.615850e-47 |
| Msa0077540 | Msa1420250 | 0.805176 | 1.514807e-49 | -8.615850e-47 |
| Msa0077540 | Msa1422430 | 0.802760 | 4.814078e-49 | -8.615850e-47 |
| Msa0077540 | Msa1424780 | 0.810879 | 9.254956e-51 | -8.615850e-47 |
| Msa0077540 | Msa1438050 | 0.837033 | 6.599280e-57 | -8.615850e-47 |
| Msa0077540 | Msa1447180 | 0.834261 | 3.320929e-56 | -8.615850e-47 |
| Msa0077540 | Msa1450720 | 0.811042 | 8.530420e-51 | -8.615850e-47 |
| Msa0077540 | Msa1459910 | 0.809107 | 2.228485e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077540 | MtrunA17_Chr1g0187451 | 98.515 | 202 | 3 | 0 | 1 | 202 | 1 | 202 | 2.19e-151 | 417 |
| Msa0077540 | MtrunA17_Chr1g0166501 | 81.683 | 202 | 37 | 0 | 1 | 202 | 1 | 202 | 7.78e-126 | 353 |
| Msa0077540 | MtrunA17_Chr1g0187431 | 82.781 | 151 | 13 | 1 | 46 | 196 | 1 | 138 | 7.87e-88 | 254 |
| Msa0077540 | MtrunA17_Chr1g0159211 | 34.921 | 189 | 118 | 1 | 19 | 202 | 35 | 223 | 3.06e-40 | 136 |
| Msa0077540 | MtrunA17_Chr3g0126121 | 37.433 | 187 | 112 | 3 | 21 | 202 | 36 | 222 | 4.47e-39 | 133 |
| Msa0077540 | MtrunA17_Chr1g0159221 | 34.574 | 188 | 119 | 1 | 19 | 202 | 36 | 223 | 5.88e-39 | 133 |
| Msa0077540 | MtrunA17_Chr1g0187441 | 73.469 | 49 | 13 | 0 | 1 | 49 | 16 | 64 | 1.39e-20 | 81.6 |
| Msa0077540 | MtrunA17_Chr2g0292061 | 24.476 | 143 | 104 | 1 | 18 | 160 | 96 | 234 | 4.54e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077540 | AT2G33470.2 | 74.257 | 202 | 52 | 0 | 1 | 202 | 1 | 202 | 2.34e-116 | 329 |
| Msa0077540 | AT2G33470.1 | 74.257 | 202 | 52 | 0 | 1 | 202 | 1 | 202 | 2.34e-116 | 329 |
| Msa0077540 | AT1G21360.1 | 36.842 | 190 | 114 | 2 | 17 | 201 | 34 | 222 | 6.93e-38 | 130 |
| Msa0077540 | AT3G21260.3 | 34.444 | 180 | 114 | 1 | 26 | 201 | 53 | 232 | 8.06e-36 | 125 |
| Msa0077540 | AT1G21360.2 | 36.646 | 161 | 96 | 2 | 46 | 201 | 1 | 160 | 2.70e-30 | 109 |
| Msa0077540 | AT1G21360.3 | 37.879 | 132 | 82 | 0 | 17 | 148 | 34 | 165 | 1.87e-25 | 98.2 |
| Msa0077540 | AT3G21260.2 | 33.333 | 147 | 94 | 1 | 59 | 201 | 2 | 148 | 3.66e-25 | 96.3 |
| Msa0077540 | AT3G21260.1 | 32.857 | 140 | 90 | 1 | 66 | 201 | 4 | 143 | 2.45e-23 | 91.3 |
Find 63 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTATCATGTCCATTATTT+TGG | 0.137452 | 1_2:-54526990 | None:intergenic |
| TGAAGAGAATCACAAGTTTC+TGG | 0.197925 | 1_2:+54526364 | Msa0077540:CDS |
| AATTCTGTCACAGCCTTTCT+TGG | 0.198191 | 1_2:+54524030 | Msa0077540:CDS |
| CTTCTTTAGAGTCTTGTTAT+AGG | 0.217183 | 1_2:-54526116 | None:intergenic |
| ACTATACAGGCAGTTGAATT+TGG | 0.221005 | 1_2:-54525281 | None:intergenic |
| CTTCAGAGCAATGGATTTCT+TGG | 0.230093 | 1_2:+54526030 | Msa0077540:intron |
| GGTTGGATTAGATAAATATT+TGG | 0.236982 | 1_2:-54525260 | None:intergenic |
| TCTATTGGCATCCAAAATAA+TGG | 0.272986 | 1_2:+54526979 | Msa0077540:three_prime_UTR |
| CAATAGAGAAACAGAGTTTC+AGG | 0.284684 | 1_2:-54526963 | None:intergenic |
| CTGAAACTCTGTTTCTCTAT+TGG | 0.300000 | 1_2:+54526964 | Msa0077540:three_prime_UTR |
| ATTCTTATGGCAGATAAGTT+TGG | 0.303743 | 1_2:+54524821 | Msa0077540:intron |
| AAACATATACTTCCTGTTAT+AGG | 0.315283 | 1_2:+54524061 | Msa0077540:CDS |
| CAGGCGCAAATCAAGTTTAT+AGG | 0.323450 | 1_2:-54523001 | None:intergenic |
| TCCATGAATTTCTTCCTATC+AGG | 0.324564 | 1_2:-54526272 | None:intergenic |
| GAAACTTGTGATTCTCTTCA+AGG | 0.338646 | 1_2:-54526361 | None:intergenic |
| TATTGAACTATATTTGCATT+TGG | 0.369916 | 1_2:+54527115 | Msa0077540:three_prime_UTR |
| GAAATTCATGGAGGTGATAC+AGG | 0.370152 | 1_2:+54526283 | Msa0077540:CDS |
| ATTCAACTGCCTGTATAGTT+TGG | 0.375332 | 1_2:+54525285 | Msa0077540:CDS |
| AAAGCATGTAAAGTCTGAAC+AGG | 0.386552 | 1_2:+54524003 | Msa0077540:CDS |
| GAGAAGTCCATTGGTACAAC+TGG | 0.387611 | 1_2:-54525347 | None:intergenic |
| CTCTAAAGAAGTGGCATGGC+TGG | 0.390523 | 1_2:+54526128 | Msa0077540:CDS |
| ATGTTGAGACAAATGCAATT+TGG | 0.405267 | 1_2:+54527074 | Msa0077540:three_prime_UTR |
| ATTTGGATTGGATGAATTGA+AGG | 0.405788 | 1_2:+54526862 | Msa0077540:CDS |
| CCGCATGCTCAATTAAGTTT+CGG | 0.407021 | 1_2:-54526063 | None:intergenic |
| ATTGAAGGCTTCATAAAGAA+TGG | 0.408109 | 1_2:+54526877 | Msa0077540:exon |
| ATAGAGCAATTACCTATAAC+AGG | 0.408205 | 1_2:-54524073 | None:intergenic |
| CTTCATAAAGAATGGATTCA+TGG | 0.423762 | 1_2:+54526885 | Msa0077540:exon |
| GAGACAAATGCAATTTGGTT+TGG | 0.428004 | 1_2:+54527079 | Msa0077540:three_prime_UTR |
| TACAGGCAGTTGAATTTGGT+TGG | 0.435495 | 1_2:-54525277 | None:intergenic |
| GTTGTACCAATGGACTTCTC+TGG | 0.441414 | 1_2:+54525350 | Msa0077540:CDS |
| GGCACAGGCTCGATTTGGAT+TGG | 0.445538 | 1_2:+54526850 | Msa0077540:intron |
| TGACATAGGTGGTAATATAT+CGG | 0.452189 | 1_2:+54524868 | Msa0077540:CDS |
| CAGAGCAATGGATTTCTTGG+TGG | 0.470381 | 1_2:+54526033 | Msa0077540:intron |
| CTACTTGTACCAAACTATAC+AGG | 0.482133 | 1_2:-54525294 | None:intergenic |
| TTGTGATTCTCTTCAAGGAA+AGG | 0.512151 | 1_2:-54526356 | None:intergenic |
| CGATGAAGCTTGCTCCTGAT+AGG | 0.512345 | 1_2:+54526258 | Msa0077540:CDS |
| CAGAAAACAAGTCATTTGTA+AGG | 0.518851 | 1_2:-54527038 | None:intergenic |
| ATGGACTTCTCTGGCTTACA+AGG | 0.522903 | 1_2:+54525359 | Msa0077540:CDS |
| TCCTGATAGGAAGAAATTCA+TGG | 0.526707 | 1_2:+54526271 | Msa0077540:CDS |
| CTTGTTATAGGAATCAGTAC+AGG | 0.533723 | 1_2:-54526104 | None:intergenic |
| ATGTAAAATCTTCAGAGCAA+TGG | 0.543737 | 1_2:+54526021 | Msa0077540:intron |
| CACCTATGTCAGATTTGACA+AGG | 0.546300 | 1_2:-54524856 | None:intergenic |
| TCATACTCGTAGTGCCGTCG+TGG | 0.549745 | 1_2:+54522868 | Msa0077540:five_prime_UTR |
| CCGAAACTTAATTGAGCATG+CGG | 0.552124 | 1_2:+54526063 | Msa0077540:CDS |
| TGTTTGCACACATCCAAGAA+AGG | 0.556146 | 1_2:-54524043 | None:intergenic |
| ACTTAATTGAGCATGCGGAT+TGG | 0.558353 | 1_2:+54526068 | Msa0077540:CDS |
| ATAACAAGACTCTAAAGAAG+TGG | 0.561369 | 1_2:+54526119 | Msa0077540:CDS |
| GGTACAACTGGATGATGCCT+TGG | 0.564664 | 1_2:-54525335 | None:intergenic |
| GCATCATCCAGTTGTACCAA+TGG | 0.585383 | 1_2:+54525340 | Msa0077540:CDS |
| CTGTGATTGACAACAATCGC+AGG | 0.591685 | 1_2:-54523020 | None:intergenic |
| AGTTGAAACTAAAACTGCCA+AGG | 0.615757 | 1_2:+54525318 | Msa0077540:CDS |
| TGTAAGCCAGAGAAGTCCAT+TGG | 0.619617 | 1_2:-54525356 | None:intergenic |
| CATACTCGTAGTGCCGTCGT+GGG | 0.622239 | 1_2:+54522869 | Msa0077540:five_prime_UTR |
| ATGGAGGTGATACAGGGAGG+TGG | 0.623912 | 1_2:+54526290 | Msa0077540:CDS |
| ACCCTTGTCAAATCTGACAT+AGG | 0.626109 | 1_2:+54524854 | Msa0077540:CDS |
| AAATTCATGGAGGTGATACA+GGG | 0.645139 | 1_2:+54526284 | Msa0077540:CDS |
| AAGACTCTAAAGAAGTGGCA+TGG | 0.651111 | 1_2:+54526124 | Msa0077540:CDS |
| CTTGTCAAATCTGACATAGG+TGG | 0.659236 | 1_2:+54524857 | Msa0077540:CDS |
| TTGCAAAGTGATTCCCACGA+CGG | 0.679621 | 1_2:-54522882 | None:intergenic |
| AAGCATGTAAAGTCTGAACA+GGG | 0.684936 | 1_2:+54524004 | Msa0077540:CDS |
| ACCTATGTCAGATTTGACAA+GGG | 0.696405 | 1_2:-54524855 | None:intergenic |
| TTCATGGAGGTGATACAGGG+AGG | 0.725186 | 1_2:+54526287 | Msa0077540:CDS |
| TGATAGGAAGAAATTCATGG+AGG | 0.764708 | 1_2:+54526274 | Msa0077540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAAATCATTTTAATTTTA+AGG | + | chr1_2:54524557-54524576 | Msa0077540:intron | 10.0% |
| !! | ATATGAGATATATATATATA+CGG | - | chr1_2:54524932-54524951 | None:intergenic | 10.0% |
| !! | AAAAAAAACTTAAATTGTAT+TGG | + | chr1_2:54525169-54525188 | Msa0077540:intron | 10.0% |
| !!! | AATTCTAATTGTTTTCTTAA+TGG | + | chr1_2:54523129-54523148 | Msa0077540:intron | 15.0% |
| !! | AATATATCATATATATGTGT+AGG | + | chr1_2:54523557-54523576 | Msa0077540:intron | 15.0% |
| !! | ATATATCATATATATGTGTA+GGG | + | chr1_2:54523558-54523577 | Msa0077540:intron | 15.0% |
| !! | GGAATATTAGATTAAATTTA+TGG | - | chr1_2:54524197-54524216 | None:intergenic | 15.0% |
| !! | TATGAGATATATATATATAC+GGG | - | chr1_2:54524931-54524950 | None:intergenic | 15.0% |
| !!! | TTTTCAAATTCATATTTAGT+TGG | + | chr1_2:54525061-54525080 | Msa0077540:intron | 15.0% |
| !! | TTCGATAAAAAATATAAGTT+TGG | - | chr1_2:54525147-54525166 | None:intergenic | 15.0% |
| !! | AATACTAACAAATTACATAA+AGG | - | chr1_2:54525972-54525991 | None:intergenic | 15.0% |
| !!! | TAAAGATATTGATTTCTTAA+AGG | + | chr1_2:54526799-54526818 | Msa0077540:intron | 15.0% |
| !!! | TCTTTTTGAAAAAGAATAAG+TGG | + | chr1_2:54522838-54522857 | Msa0077540:five_prime_UTR | 20.0% |
| !!! | AAATAACGTAATTTCCTTTT+TGG | - | chr1_2:54522958-54522977 | None:intergenic | 20.0% |
| !! | AAAATAATTGCAATTGAGAA+AGG | - | chr1_2:54523089-54523108 | None:intergenic | 20.0% |
| !!! | TTTGAAAAGTTGTGAAATTT+TGG | + | chr1_2:54523167-54523186 | Msa0077540:intron | 20.0% |
| !!! | AATTTTGGAAAATTAGTTCA+TGG | + | chr1_2:54523182-54523201 | Msa0077540:intron | 20.0% |
| !!! | ATTTTGGAAAATTAGTTCAT+GGG | + | chr1_2:54523183-54523202 | Msa0077540:intron | 20.0% |
| !! | AAAATCAAAACTTTACTGAA+AGG | - | chr1_2:54523255-54523274 | None:intergenic | 20.0% |
| !! | AACTATAGTTAAATCATGTA+AGG | + | chr1_2:54523345-54523364 | Msa0077540:intron | 20.0% |
| !! | TATTAGCTAATCAAAAAGAA+AGG | + | chr1_2:54523534-54523553 | Msa0077540:intron | 20.0% |
| !!! | TTTAACTTCATTAGATCTTT+TGG | - | chr1_2:54523706-54523725 | None:intergenic | 20.0% |
| !! | TATGCATTTGATTATTCAAA+CGG | - | chr1_2:54524155-54524174 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTTTTAGCATGTA+TGG | + | chr1_2:54524385-54524404 | Msa0077540:intron | 20.0% |
| !!! | CATGTTTTAATGTACAAATT+TGG | + | chr1_2:54524408-54524427 | Msa0077540:intron | 20.0% |
| !! | TAAGGAAATATTTCATTAAG+AGG | + | chr1_2:54524575-54524594 | Msa0077540:intron | 20.0% |
| !! | AATATTTCATTAAGAGGAAA+AGG | + | chr1_2:54524581-54524600 | Msa0077540:intron | 20.0% |
| !! | TGATACAAGTAATCATATTA+TGG | - | chr1_2:54524781-54524800 | None:intergenic | 20.0% |
| !!! | ACTACATTTTATAGAACTTT+TGG | + | chr1_2:54525108-54525127 | Msa0077540:intron | 20.0% |
| !!! | TTTTTCTTCAATTTATGTTG+AGG | + | chr1_2:54525867-54525886 | Msa0077540:intron | 20.0% |
| !!! | GGATTTGTTTTCTATTTTTT+AGG | + | chr1_2:54526177-54526196 | Msa0077540:intron | 20.0% |
| !! | AGAAATCAATATCTTTATCA+TGG | - | chr1_2:54526796-54526815 | None:intergenic | 20.0% |
| !! | TATTGAACTATATTTGCATT+TGG | + | chr1_2:54527115-54527134 | Msa0077540:three_prime_UTR | 20.0% |
| !!! | AATTTCCTTTTTGGTGTTTT+TGG | - | chr1_2:54522949-54522968 | None:intergenic | 25.0% |
| ! | GCTATAAGCATTATGTAAAA+TGG | + | chr1_2:54523411-54523430 | Msa0077540:intron | 25.0% |
| ! | AAACACAGATCTTTCATAAA+TGG | - | chr1_2:54523487-54523506 | None:intergenic | 25.0% |
| ! | TAAAAGTTTAACCAGACTAA+GGG | - | chr1_2:54523893-54523912 | None:intergenic | 25.0% |
| ! | TGTATGTGTTTATTGAGTTA+TGG | + | chr1_2:54523915-54523934 | Msa0077540:intron | 25.0% |
| ! | AAACATATACTTCCTGTTAT+AGG | + | chr1_2:54524061-54524080 | Msa0077540:CDS | 25.0% |
| ! | ACATCAAAATGTCAAATCAA+AGG | - | chr1_2:54524101-54524120 | None:intergenic | 25.0% |
| !!! | TTGATGTGTTTTATTTTGTG+AGG | + | chr1_2:54524114-54524133 | Msa0077540:intron | 25.0% |
| !!! | TGATGTGTTTTATTTTGTGA+GGG | + | chr1_2:54524115-54524134 | Msa0077540:intron | 25.0% |
| ! | ATGCATTTGATTATTCAAAC+GGG | - | chr1_2:54524154-54524173 | None:intergenic | 25.0% |
| ! | ATACTAGCATGTTTAATGTA+AGG | + | chr1_2:54524341-54524360 | Msa0077540:intron | 25.0% |
| !! | TTGGTTCTTTAATTATACTG+TGG | + | chr1_2:54524427-54524446 | Msa0077540:intron | 25.0% |
| ! | AACTTAAATAACCAAGAAAC+AGG | - | chr1_2:54524537-54524556 | None:intergenic | 25.0% |
| ! | GAAAAGGAATAGAAAACAAT+AGG | + | chr1_2:54524597-54524616 | Msa0077540:intron | 25.0% |
| !!! | TGTATGTTTTTGATAGTGAT+GGG | - | chr1_2:54524631-54524650 | None:intergenic | 25.0% |
| ! | GAAAAACACAAGATAAAAAC+AGG | - | chr1_2:54524906-54524925 | None:intergenic | 25.0% |
| !! | GGTTGGATTAGATAAATATT+TGG | - | chr1_2:54525263-54525282 | None:intergenic | 25.0% |
| ! | TAAGTTAAGCAGTAATTGTT+TGG | - | chr1_2:54525394-54525413 | None:intergenic | 25.0% |
| ! | ACTTATAATTCCTACTGTTA+TGG | + | chr1_2:54525409-54525428 | Msa0077540:intron | 25.0% |
| ! | GAACAGTCAAAATAAAGATT+AGG | + | chr1_2:54525512-54525531 | Msa0077540:intron | 25.0% |
| ! | TCTAGCTAAAATAATCCTTT+CGG | - | chr1_2:54525568-54525587 | None:intergenic | 25.0% |
| ! | TTTATTATCTTTCAGCTCAA+TGG | + | chr1_2:54525807-54525826 | Msa0077540:intron | 25.0% |
| ! | TTATAATTGAAGCTACTGAA+AGG | - | chr1_2:54525838-54525857 | None:intergenic | 25.0% |
| !!! | TTACTAATTTTGTTTTCCCA+TGG | + | chr1_2:54525916-54525935 | Msa0077540:intron | 25.0% |
| !! | GTAACAAATATTTTACCTAC+AGG | + | chr1_2:54526232-54526251 | Msa0077540:intron | 25.0% |
| !!! | AACTTAAAAGCTTGTTGTTT+TGG | + | chr1_2:54526829-54526848 | Msa0077540:intron | 25.0% |
| !! | TGTTATCATGTCCATTATTT+TGG | - | chr1_2:54526993-54527012 | None:intergenic | 25.0% |
| TCAAACCAAAAACACCAAAA+AGG | + | chr1_2:54522941-54522960 | Msa0077540:five_prime_UTR | 30.0% | |
| ! | ATTCAACTCATTTTCAGCTT+TGG | + | chr1_2:54523212-54523231 | Msa0077540:intron | 30.0% |
| ! | TGAGTTCTTTGATTTCCATT+TGG | + | chr1_2:54523310-54523329 | Msa0077540:intron | 30.0% |
| ! | TTTGATTTCCATTTGGTGAT+GGG | + | chr1_2:54523317-54523336 | Msa0077540:intron | 30.0% |
| ATATATATGTGTAGGGTGAT+AGG | + | chr1_2:54523565-54523584 | Msa0077540:intron | 30.0% | |
| !! | GAGTGGATTTATGTTGATTT+GGG | + | chr1_2:54523587-54523606 | Msa0077540:intron | 30.0% |
| !! | AGTGGATTTATGTTGATTTG+GGG | + | chr1_2:54523588-54523607 | Msa0077540:intron | 30.0% |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr1_2:54523614-54523633 | None:intergenic | 30.0% | |
| GTAAAAGTTTAACCAGACTA+AGG | - | chr1_2:54523894-54523913 | None:intergenic | 30.0% | |
| AGCAAAACACAAAAATGGAA+GGG | + | chr1_2:54523951-54523970 | Msa0077540:intron | 30.0% | |
| ATAGAGCAATTACCTATAAC+AGG | - | chr1_2:54524076-54524095 | None:intergenic | 30.0% | |
| !!! | GATGTGTTTTATTTTGTGAG+GGG | + | chr1_2:54524116-54524135 | Msa0077540:intron | 30.0% |
| TGCATAGACTTGAATTCATT+TGG | - | chr1_2:54524218-54524237 | None:intergenic | 30.0% | |
| ATGCAATATCTGTGCATTTA+TGG | + | chr1_2:54524458-54524477 | Msa0077540:intron | 30.0% | |
| AAATGTTCACATACTGCTAA+GGG | - | chr1_2:54524498-54524517 | None:intergenic | 30.0% | |
| AAAATGTTCACATACTGCTA+AGG | - | chr1_2:54524499-54524518 | None:intergenic | 30.0% | |
| !!! | ACTGTTTTTAACCTGTTTCT+TGG | + | chr1_2:54524523-54524542 | Msa0077540:intron | 30.0% |
| !!! | GTGTATGTTTTTGATAGTGA+TGG | - | chr1_2:54524632-54524651 | None:intergenic | 30.0% |
| TTGTGTTACAATTTGATGCT+TGG | + | chr1_2:54524738-54524757 | Msa0077540:intron | 30.0% | |
| ATTCTTATGGCAGATAAGTT+TGG | + | chr1_2:54524821-54524840 | Msa0077540:intron | 30.0% | |
| TGACATAGGTGGTAATATAT+CGG | + | chr1_2:54524868-54524887 | Msa0077540:CDS | 30.0% | |
| ATAGTATAGCCATATAACCA+TGG | - | chr1_2:54525010-54525029 | None:intergenic | 30.0% | |
| TAGTACAGAGTAAGAATATG+TGG | - | chr1_2:54525212-54525231 | None:intergenic | 30.0% | |
| TCGGAATCTTATGCATATAT+TGG | - | chr1_2:54525549-54525568 | None:intergenic | 30.0% | |
| TATATGCATAAGATTCCGAA+AGG | + | chr1_2:54525550-54525569 | Msa0077540:intron | 30.0% | |
| ! | CCAGTATCATATTGCATTTT+TGG | - | chr1_2:54525641-54525660 | None:intergenic | 30.0% |
| CCAAAAATGCAATATGATAC+TGG | + | chr1_2:54525638-54525657 | Msa0077540:intron | 30.0% | |
| !!! | CTAATTGAGTCACTTTTTCA+AGG | + | chr1_2:54525759-54525778 | Msa0077540:intron | 30.0% |
| ! | AAACAAATAAGCATTTGCTG+AGG | - | chr1_2:54525949-54525968 | None:intergenic | 30.0% |
| ATGTAAAATCTTCAGAGCAA+TGG | + | chr1_2:54526021-54526040 | Msa0077540:intron | 30.0% | |
| !! | CTTCTTTAGAGTCTTGTTAT+AGG | - | chr1_2:54526119-54526138 | None:intergenic | 30.0% |
| ! | ATAACAAGACTCTAAAGAAG+TGG | + | chr1_2:54526119-54526138 | Msa0077540:CDS | 30.0% |
| TCATGTAGTATATGGTAACA+TGG | + | chr1_2:54526205-54526224 | Msa0077540:intron | 30.0% | |
| ATTGCTGACATTAATCTACA+AGG | + | chr1_2:54526424-54526443 | Msa0077540:intron | 30.0% | |
| CATGACACATTAATTGATCT+TGG | - | chr1_2:54526600-54526619 | None:intergenic | 30.0% | |
| ! | ATTTGGATTGGATGAATTGA+AGG | + | chr1_2:54526862-54526881 | Msa0077540:CDS | 30.0% |
| ATTGAAGGCTTCATAAAGAA+TGG | + | chr1_2:54526877-54526896 | Msa0077540:exon | 30.0% | |
| ! | CTTCATAAAGAATGGATTCA+TGG | + | chr1_2:54526885-54526904 | Msa0077540:exon | 30.0% |
| TCTATTGGCATCCAAAATAA+TGG | + | chr1_2:54526979-54526998 | Msa0077540:three_prime_UTR | 30.0% | |
| CAGAAAACAAGTCATTTGTA+AGG | - | chr1_2:54527041-54527060 | None:intergenic | 30.0% | |
| !!! | CAAATGACTTGTTTTCTGTT+TGG | + | chr1_2:54527043-54527062 | Msa0077540:three_prime_UTR | 30.0% |
| ATGTTGAGACAAATGCAATT+TGG | + | chr1_2:54527074-54527093 | Msa0077540:three_prime_UTR | 30.0% | |
| ! | CTTTGATTTCCATTTGGTGA+TGG | + | chr1_2:54523316-54523335 | Msa0077540:intron | 35.0% |
| ACTCACTTCAACTCATTGTT+AGG | + | chr1_2:54523439-54523458 | Msa0077540:intron | 35.0% | |
| ACAGATCTTTCATAAATGGC+AGG | - | chr1_2:54523483-54523502 | None:intergenic | 35.0% | |
| ! | GGAGTGGATTTATGTTGATT+TGG | + | chr1_2:54523586-54523605 | Msa0077540:intron | 35.0% |
| GCACAAGTGTTTATCATGAT+AGG | + | chr1_2:54523645-54523664 | Msa0077540:intron | 35.0% | |
| TGTGCAGCAAAACACAAAAA+TGG | + | chr1_2:54523946-54523965 | Msa0077540:intron | 35.0% | |
| CAGCAAAACACAAAAATGGA+AGG | + | chr1_2:54523950-54523969 | Msa0077540:intron | 35.0% | |
| AAAGCATGTAAAGTCTGAAC+AGG | + | chr1_2:54524003-54524022 | Msa0077540:CDS | 35.0% | |
| AAGCATGTAAAGTCTGAACA+GGG | + | chr1_2:54524004-54524023 | Msa0077540:CDS | 35.0% | |
| TTTGTGAGGGGAATATAGAA+TGG | + | chr1_2:54524128-54524147 | Msa0077540:intron | 35.0% | |
| !!! | GTCTTTTAAGATGCAGATAG+TGG | - | chr1_2:54524266-54524285 | None:intergenic | 35.0% |
| TAGGCTCAATAAAGATACAG+CGG | - | chr1_2:54524288-54524307 | None:intergenic | 35.0% | |
| AGTATGTGTCGAATATAAGG+AGG | - | chr1_2:54524326-54524345 | None:intergenic | 35.0% | |
| GCTAGTATGTGTCGAATATA+AGG | - | chr1_2:54524329-54524348 | None:intergenic | 35.0% | |
| AAAACATGCCACACAATCAT+CGG | - | chr1_2:54524372-54524391 | None:intergenic | 35.0% | |
| AATGTTCACATACTGCTAAG+GGG | - | chr1_2:54524497-54524516 | None:intergenic | 35.0% | |
| ! | TGTATCATTGTTGACTGAAC+TGG | + | chr1_2:54524794-54524813 | Msa0077540:intron | 35.0% |
| !! | CTGAACTGGTGTTATTCTTA+TGG | + | chr1_2:54524808-54524827 | Msa0077540:intron | 35.0% |
| ACCTATGTCAGATTTGACAA+GGG | - | chr1_2:54524858-54524877 | None:intergenic | 35.0% | |
| TTCCTTAAGATGACATACCA+TGG | + | chr1_2:54524990-54525009 | Msa0077540:intron | 35.0% | |
| AACCATGGTATGTCATCTTA+AGG | - | chr1_2:54524995-54525014 | None:intergenic | 35.0% | |
| GATGACATACCATGGTTATA+TGG | + | chr1_2:54524998-54525017 | Msa0077540:intron | 35.0% | |
| TATACCTTGAAGTGTATGCT+GGG | + | chr1_2:54525027-54525046 | Msa0077540:intron | 35.0% | |
| TATTTGGATTCCAATCTCTG+CGG | - | chr1_2:54525247-54525266 | None:intergenic | 35.0% | |
| ACTATACAGGCAGTTGAATT+TGG | - | chr1_2:54525284-54525303 | None:intergenic | 35.0% | |
| ATTCAACTGCCTGTATAGTT+TGG | + | chr1_2:54525285-54525304 | Msa0077540:CDS | 35.0% | |
| CTACTTGTACCAAACTATAC+AGG | - | chr1_2:54525297-54525316 | None:intergenic | 35.0% | |
| AGTTGAAACTAAAACTGCCA+AGG | + | chr1_2:54525318-54525337 | Msa0077540:CDS | 35.0% | |
| TTTGAGAACACCATAACAGT+AGG | - | chr1_2:54525422-54525441 | None:intergenic | 35.0% | |
| CATGCAAAACAAACTCTACT+TGG | - | chr1_2:54525485-54525504 | None:intergenic | 35.0% | |
| !!! | GCATTTTTGGTCCCAAATTT+TGG | - | chr1_2:54525628-54525647 | None:intergenic | 35.0% |
| !!! | TCACTTTTTCAAGGTGTGTT+AGG | + | chr1_2:54525768-54525787 | Msa0077540:intron | 35.0% |
| !!! | CACTTTTTCAAGGTGTGTTA+GGG | + | chr1_2:54525769-54525788 | Msa0077540:intron | 35.0% |
| ATTATCTTTCAGCTCAATGG+TGG | + | chr1_2:54525810-54525829 | Msa0077540:intron | 35.0% | |
| !!! | TATGTTGAGGTTTTGAAGCT+CGG | + | chr1_2:54525880-54525899 | Msa0077540:intron | 35.0% |
| !!! | TTTTGTTTTCCCATGGTTAG+AGG | + | chr1_2:54525923-54525942 | Msa0077540:intron | 35.0% |
| ! | CTTGTTATAGGAATCAGTAC+AGG | - | chr1_2:54526107-54526126 | None:intergenic | 35.0% |
| !! | TAGTTCTAGCTTCACTGTAA+GGG | + | chr1_2:54526156-54526175 | Msa0077540:intron | 35.0% |
| !! | AGGAGTGTTCATGTAGTATA+TGG | + | chr1_2:54526197-54526216 | Msa0077540:intron | 35.0% |
| TCCTGATAGGAAGAAATTCA+TGG | + | chr1_2:54526271-54526290 | Msa0077540:CDS | 35.0% | |
| TCCATGAATTTCTTCCTATC+AGG | - | chr1_2:54526275-54526294 | None:intergenic | 35.0% | |
| TGATAGGAAGAAATTCATGG+AGG | + | chr1_2:54526274-54526293 | Msa0077540:CDS | 35.0% | |
| AAATTCATGGAGGTGATACA+GGG | + | chr1_2:54526284-54526303 | Msa0077540:CDS | 35.0% | |
| TTGTGATTCTCTTCAAGGAA+AGG | - | chr1_2:54526359-54526378 | None:intergenic | 35.0% | |
| GAAACTTGTGATTCTCTTCA+AGG | - | chr1_2:54526364-54526383 | None:intergenic | 35.0% | |
| TGAAGAGAATCACAAGTTTC+TGG | + | chr1_2:54526364-54526383 | Msa0077540:CDS | 35.0% | |
| TAATCTACAAGGCCTGAAAA+AGG | + | chr1_2:54526435-54526454 | Msa0077540:intron | 35.0% | |
| !! | TTCCCTGCATTTTGAAAACA+AGG | + | chr1_2:54526480-54526499 | Msa0077540:intron | 35.0% |
| !! | TCCCTGCATTTTGAAAACAA+GGG | + | chr1_2:54526481-54526500 | Msa0077540:intron | 35.0% |
| !!! | TCCCTTGTTTTCAAAATGCA+GGG | - | chr1_2:54526485-54526504 | None:intergenic | 35.0% |
| !!! | ATCCCTTGTTTTCAAAATGC+AGG | - | chr1_2:54526486-54526505 | None:intergenic | 35.0% |
| TACATCTGCATGAAATCATC+TGG | + | chr1_2:54526540-54526559 | Msa0077540:intron | 35.0% | |
| ACATCTGCATGAAATCATCT+GGG | + | chr1_2:54526541-54526560 | Msa0077540:intron | 35.0% | |
| ! | GTTCATCTTGGATTTGAGAT+TGG | + | chr1_2:54526570-54526589 | Msa0077540:intron | 35.0% |
| CAATAGAGAAACAGAGTTTC+AGG | - | chr1_2:54526966-54526985 | None:intergenic | 35.0% | |
| ! | CTGAAACTCTGTTTCTCTAT+TGG | + | chr1_2:54526964-54526983 | Msa0077540:three_prime_UTR | 35.0% |
| !!! | ATGACTTGTTTTCTGTTTGG+TGG | + | chr1_2:54527046-54527065 | Msa0077540:three_prime_UTR | 35.0% |
| GAGACAAATGCAATTTGGTT+TGG | + | chr1_2:54527079-54527098 | Msa0077540:three_prime_UTR | 35.0% | |
| CAGGCGCAAATCAAGTTTAT+AGG | - | chr1_2:54523004-54523023 | None:intergenic | 40.0% | |
| AATTCTGTCACAGCCTTTCT+TGG | + | chr1_2:54524030-54524049 | Msa0077540:CDS | 40.0% | |
| TGTTTGCACACATCCAAGAA+AGG | - | chr1_2:54524046-54524065 | None:intergenic | 40.0% | |
| ! | ATAGTGGCGATTTAGGTTAC+AGG | - | chr1_2:54524250-54524269 | None:intergenic | 40.0% |
| GAGGAGTAAGGTAAAGAAGT+AGG | - | chr1_2:54524307-54524326 | None:intergenic | 40.0% | |
| GTCGAATATAAGGAGGAGTA+AGG | - | chr1_2:54524319-54524338 | None:intergenic | 40.0% | |
| ACATACTGCTAAGGGGTAAA+AGG | - | chr1_2:54524490-54524509 | None:intergenic | 40.0% | |
| ACCCTTGTCAAATCTGACAT+AGG | + | chr1_2:54524854-54524873 | Msa0077540:CDS | 40.0% | |
| CACCTATGTCAGATTTGACA+AGG | - | chr1_2:54524859-54524878 | None:intergenic | 40.0% | |
| CTTGTCAAATCTGACATAGG+TGG | + | chr1_2:54524857-54524876 | Msa0077540:CDS | 40.0% | |
| CTATACCTTGAAGTGTATGC+TGG | + | chr1_2:54525026-54525045 | Msa0077540:intron | 40.0% | |
| TACAGGCAGTTGAATTTGGT+TGG | - | chr1_2:54525280-54525299 | None:intergenic | 40.0% | |
| TGCACGTGCTTTCCAAAATT+TGG | + | chr1_2:54525613-54525632 | Msa0077540:intron | 40.0% | |
| GCACGTGCTTTCCAAAATTT+GGG | + | chr1_2:54525614-54525633 | Msa0077540:intron | 40.0% | |
| ! | CTTCAGAGCAATGGATTTCT+TGG | + | chr1_2:54526030-54526049 | Msa0077540:intron | 40.0% |
| CCGCATGCTCAATTAAGTTT+CGG | - | chr1_2:54526066-54526085 | None:intergenic | 40.0% | |
| CCGAAACTTAATTGAGCATG+CGG | + | chr1_2:54526063-54526082 | Msa0077540:CDS | 40.0% | |
| ACTTAATTGAGCATGCGGAT+TGG | + | chr1_2:54526068-54526087 | Msa0077540:CDS | 40.0% | |
| ! | AAGACTCTAAAGAAGTGGCA+TGG | + | chr1_2:54526124-54526143 | Msa0077540:CDS | 40.0% |
| !! | CTAGTTCTAGCTTCACTGTA+AGG | + | chr1_2:54526155-54526174 | Msa0077540:intron | 40.0% |
| GAAATTCATGGAGGTGATAC+AGG | + | chr1_2:54526283-54526302 | Msa0077540:CDS | 40.0% | |
| ! | ACAGTTCAGTCTCCTTTTTC+AGG | - | chr1_2:54526450-54526469 | None:intergenic | 40.0% |
| TGAAAAAGGAGACTGAACTG+TGG | + | chr1_2:54526449-54526468 | Msa0077540:intron | 40.0% | |
| TCTGGGAACAATGTTCATCT+TGG | + | chr1_2:54526558-54526577 | Msa0077540:intron | 40.0% | |
| TGTGTCATGCAATTACTGCA+CGG | + | chr1_2:54526611-54526630 | Msa0077540:intron | 40.0% | |
| AATGCAGAGTTTCAGGGATT+TGG | - | chr1_2:54526640-54526659 | None:intergenic | 40.0% | |
| CACGATAATGCAGAGTTTCA+GGG | - | chr1_2:54526646-54526665 | None:intergenic | 40.0% | |
| ACACGATAATGCAGAGTTTC+AGG | - | chr1_2:54526647-54526666 | None:intergenic | 40.0% | |
| !!! | AAAGCTTGTTGTTTTGGCAC+AGG | + | chr1_2:54526835-54526854 | Msa0077540:intron | 40.0% |
| !! | CTTGTTTTCTGTTTGGTGGA+TGG | + | chr1_2:54527050-54527069 | Msa0077540:three_prime_UTR | 40.0% |
| TTGCAAAGTGATTCCCACGA+CGG | - | chr1_2:54522885-54522904 | None:intergenic | 45.0% | |
| CTGTGATTGACAACAATCGC+AGG | - | chr1_2:54523023-54523042 | None:intergenic | 45.0% | |
| ! | GTTTTGTGCCCATCACCAAA+TGG | - | chr1_2:54523328-54523347 | None:intergenic | 45.0% |
| TATGTGTAGGGTGATAGGAG+TGG | + | chr1_2:54523570-54523589 | Msa0077540:intron | 45.0% | |
| !! | ATGTTGATTTGGGGCCTGTT+TGG | + | chr1_2:54523597-54523616 | Msa0077540:intron | 45.0% |
| GACTAAGGGTCTGTTTGGAT+TGG | - | chr1_2:54523879-54523898 | None:intergenic | 45.0% | |
| ATCCAAACAGACCCTTAGTC+TGG | + | chr1_2:54523879-54523898 | Msa0077540:intron | 45.0% | |
| AACCAGACTAAGGGTCTGTT+TGG | - | chr1_2:54523884-54523903 | None:intergenic | 45.0% | |
| ! | GACTGTTTTCGCTGCTACAT+TGG | + | chr1_2:54523973-54523992 | Msa0077540:CDS | 45.0% |
| ! | GTTTTCGCTGCTACATTGGA+AGG | + | chr1_2:54523977-54523996 | Msa0077540:CDS | 45.0% |
| ! | GATGCAGATAGTGGCGATTT+AGG | - | chr1_2:54524257-54524276 | None:intergenic | 45.0% |
| AGGTTACTCCGATGATTGTG+TGG | + | chr1_2:54524361-54524380 | Msa0077540:intron | 45.0% | |
| TACACCCAGCATACACTTCA+AGG | - | chr1_2:54525034-54525053 | None:intergenic | 45.0% | |
| TTGACTTTCACCGCAGAGAT+TGG | + | chr1_2:54525234-54525253 | Msa0077540:intron | 45.0% | |
| GCATCATCCAGTTGTACCAA+TGG | + | chr1_2:54525340-54525359 | Msa0077540:CDS | 45.0% | |
| GAGAAGTCCATTGGTACAAC+TGG | - | chr1_2:54525350-54525369 | None:intergenic | 45.0% | |
| ! | GTTGTACCAATGGACTTCTC+TGG | + | chr1_2:54525350-54525369 | Msa0077540:CDS | 45.0% |
| TGTAAGCCAGAGAAGTCCAT+TGG | - | chr1_2:54525359-54525378 | None:intergenic | 45.0% | |
| ! | ATGGACTTCTCTGGCTTACA+AGG | + | chr1_2:54525359-54525378 | Msa0077540:CDS | 45.0% |
| ! | CAGAGCAATGGATTTCTTGG+TGG | + | chr1_2:54526033-54526052 | Msa0077540:intron | 45.0% |
| !!! | AATATATATATTTCTAAATA+TGG | - | chr1_2:54526681-54526700 | None:intergenic | 5.0% |
| GGTACAACTGGATGATGCCT+TGG | - | chr1_2:54525338-54525357 | None:intergenic | 50.0% | |
| GCAAGAATGTTTGCTCTGCG+TGG | + | chr1_2:54525708-54525727 | Msa0077540:intron | 50.0% | |
| TTGCTGAGGCCTCTAACCAT+GGG | - | chr1_2:54525935-54525954 | None:intergenic | 50.0% | |
| TTTGCTGAGGCCTCTAACCA+TGG | - | chr1_2:54525936-54525955 | None:intergenic | 50.0% | |
| ! | CTCTAAAGAAGTGGCATGGC+TGG | + | chr1_2:54526128-54526147 | Msa0077540:CDS | 50.0% |
| CAAGCTTCATCGCTACCTGT+AGG | - | chr1_2:54526250-54526269 | None:intergenic | 50.0% | |
| ! | CGATGAAGCTTGCTCCTGAT+AGG | + | chr1_2:54526258-54526277 | Msa0077540:CDS | 50.0% |
| TTCATGGAGGTGATACAGGG+AGG | + | chr1_2:54526287-54526306 | Msa0077540:CDS | 50.0% | |
| GGAGACTGAACTGTGGACTT+TGG | + | chr1_2:54526456-54526475 | Msa0077540:intron | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+TGG | - | chr1_2:54526722-54526741 | None:intergenic | 50.0% | |
| !! | GTTTTGGCACAGGCTCGATT+TGG | + | chr1_2:54526845-54526864 | Msa0077540:intron | 50.0% |
| TCATACTCGTAGTGCCGTCG+TGG | + | chr1_2:54522868-54522887 | Msa0077540:five_prime_UTR | 55.0% | |
| CATACTCGTAGTGCCGTCGT+GGG | + | chr1_2:54522869-54522888 | Msa0077540:five_prime_UTR | 55.0% | |
| ATGGAGGTGATACAGGGAGG+TGG | + | chr1_2:54526290-54526309 | Msa0077540:CDS | 55.0% | |
| !! | GGCACAGGCTCGATTTGGAT+TGG | + | chr1_2:54526850-54526869 | Msa0077540:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 54522818 | 54527236 | 54522818 | ID=Msa0077540;Name=Msa0077540 |
| chr1_2 | mRNA | 54522818 | 54527236 | 54522818 | ID=Msa0077540-mRNA-1;Parent=Msa0077540;Name=Msa0077540-mRNA-1;_AED=0.03;_eAED=0.03;_QI=275|1|1|1|0.83|0.71|7|344|202 |
| chr1_2 | exon | 54522818 | 54523080 | 54522818 | ID=Msa0077540-mRNA-1:exon:16878;Parent=Msa0077540-mRNA-1 |
| chr1_2 | exon | 54523953 | 54524082 | 54523953 | ID=Msa0077540-mRNA-1:exon:16879;Parent=Msa0077540-mRNA-1 |
| chr1_2 | exon | 54524834 | 54524889 | 54524834 | ID=Msa0077540-mRNA-1:exon:16880;Parent=Msa0077540-mRNA-1 |
| chr1_2 | exon | 54525250 | 54525380 | 54525250 | ID=Msa0077540-mRNA-1:exon:16881;Parent=Msa0077540-mRNA-1 |
| chr1_2 | exon | 54526036 | 54526171 | 54526036 | ID=Msa0077540-mRNA-1:exon:16882;Parent=Msa0077540-mRNA-1 |
| chr1_2 | exon | 54526254 | 54526385 | 54526254 | ID=Msa0077540-mRNA-1:exon:16883;Parent=Msa0077540-mRNA-1 |
| chr1_2 | exon | 54526857 | 54527236 | 54526857 | ID=Msa0077540-mRNA-1:exon:16884;Parent=Msa0077540-mRNA-1 |
| chr1_2 | five_prime_UTR | 54522818 | 54523080 | 54522818 | ID=Msa0077540-mRNA-1:five_prime_utr;Parent=Msa0077540-mRNA-1 |
| chr1_2 | five_prime_UTR | 54523953 | 54523964 | 54523953 | ID=Msa0077540-mRNA-1:five_prime_utr;Parent=Msa0077540-mRNA-1 |
| chr1_2 | CDS | 54523965 | 54524082 | 54523965 | ID=Msa0077540-mRNA-1:cds;Parent=Msa0077540-mRNA-1 |
| chr1_2 | CDS | 54524834 | 54524889 | 54524834 | ID=Msa0077540-mRNA-1:cds;Parent=Msa0077540-mRNA-1 |
| chr1_2 | CDS | 54525250 | 54525380 | 54525250 | ID=Msa0077540-mRNA-1:cds;Parent=Msa0077540-mRNA-1 |
| chr1_2 | CDS | 54526036 | 54526171 | 54526036 | ID=Msa0077540-mRNA-1:cds;Parent=Msa0077540-mRNA-1 |
| chr1_2 | CDS | 54526254 | 54526385 | 54526254 | ID=Msa0077540-mRNA-1:cds;Parent=Msa0077540-mRNA-1 |
| chr1_2 | CDS | 54526857 | 54526892 | 54526857 | ID=Msa0077540-mRNA-1:cds;Parent=Msa0077540-mRNA-1 |
| chr1_2 | three_prime_UTR | 54526893 | 54527236 | 54526893 | ID=Msa0077540-mRNA-1:three_prime_utr;Parent=Msa0077540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
