Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766670 | sp|Q99LX5|MMTA2_MOUSE | 40.462 | 173 | 90 | 5 | 1 | 166 | 1 | 167 | 6.39e-29 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766670 | G7JWG8 | 98.253 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 2.23e-158 | 447 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0766670 | 0.804493 | 2.103629e-49 | -8.615850e-47 |
| Msa0007850 | Msa0766670 | 0.831423 | 1.683759e-55 | -8.615850e-47 |
| Msa0008840 | Msa0766670 | 0.836531 | 8.859312e-57 | -8.615850e-47 |
| Msa0014830 | Msa0766670 | 0.865932 | 4.124582e-65 | -8.615850e-47 |
| Msa0026660 | Msa0766670 | 0.804428 | 2.171075e-49 | -8.615850e-47 |
| Msa0029630 | Msa0766670 | 0.805192 | 1.503077e-49 | -8.615850e-47 |
| Msa0033880 | Msa0766670 | 0.833893 | 4.106099e-56 | -8.615850e-47 |
| Msa0038000 | Msa0766670 | 0.822506 | 2.284450e-53 | -8.615850e-47 |
| Msa0038440 | Msa0766670 | 0.810147 | 1.332095e-50 | -8.615850e-47 |
| Msa0041690 | Msa0766670 | 0.800332 | 1.514837e-48 | -8.615850e-47 |
| Msa0047250 | Msa0766670 | 0.822999 | 1.753309e-53 | -8.615850e-47 |
| Msa0056270 | Msa0766670 | 0.819703 | 1.010184e-52 | -8.615850e-47 |
| Msa0057750 | Msa0766670 | 0.828084 | 1.094134e-54 | -8.615850e-47 |
| Msa0070430 | Msa0766670 | 0.813450 | 2.544492e-51 | -8.615850e-47 |
| Msa0074750 | Msa0766670 | 0.818414 | 1.985056e-52 | -8.615850e-47 |
| Msa0077540 | Msa0766670 | 0.846478 | 2.117669e-59 | -8.615850e-47 |
| Msa0077900 | Msa0766670 | 0.808957 | 2.399667e-50 | -8.615850e-47 |
| Msa0079920 | Msa0766670 | 0.802776 | 4.778176e-49 | -8.615850e-47 |
| Msa0093420 | Msa0766670 | 0.816778 | 4.640818e-52 | -8.615850e-47 |
| Msa0097950 | Msa0766670 | 0.829153 | 6.035764e-55 | -8.615850e-47 |
| Msa0100800 | Msa0766670 | 0.831051 | 2.077610e-55 | -8.615850e-47 |
| Msa0101180 | Msa0766670 | 0.820811 | 5.632389e-53 | -8.615850e-47 |
| Msa0103070 | Msa0766670 | 0.830405 | 2.991193e-55 | -8.615850e-47 |
| Msa0108870 | Msa0766670 | 0.819914 | 9.043426e-53 | -8.615850e-47 |
| Msa0115370 | Msa0766670 | 0.820322 | 7.292850e-53 | -8.615850e-47 |
| Msa0614510 | Msa0766670 | 0.800756 | 1.241225e-48 | -8.615850e-47 |
| Msa0615680 | Msa0766670 | 0.802067 | 6.689389e-49 | -8.615850e-47 |
| Msa0617260 | Msa0766670 | 0.831516 | 1.597018e-55 | -8.615850e-47 |
| Msa0618930 | Msa0766670 | 0.803937 | 2.746142e-49 | -8.615850e-47 |
| Msa0619860 | Msa0766670 | 0.814355 | 1.607474e-51 | -8.615850e-47 |
| Msa0624550 | Msa0766670 | -0.809940 | 1.475792e-50 | -8.615850e-47 |
| Msa0631250 | Msa0766670 | 0.804776 | 1.836063e-49 | -8.615850e-47 |
| Msa0633570 | Msa0766670 | 0.809203 | 2.124624e-50 | -8.615850e-47 |
| Msa0646130 | Msa0766670 | 0.831739 | 1.407324e-55 | -8.615850e-47 |
| Msa0654870 | Msa0766670 | 0.809278 | 2.048047e-50 | -8.615850e-47 |
| Msa0658480 | Msa0766670 | 0.811733 | 6.038716e-51 | -8.615850e-47 |
| Msa0659790 | Msa0766670 | 0.812083 | 5.068509e-51 | -8.615850e-47 |
| Msa0662630 | Msa0766670 | 0.808563 | 2.912803e-50 | -8.615850e-47 |
| Msa0666230 | Msa0766670 | 0.808357 | 3.222752e-50 | -8.615850e-47 |
| Msa0669720 | Msa0766670 | 0.803608 | 3.213774e-49 | -8.615850e-47 |
| Msa0687230 | Msa0766670 | 0.809545 | 1.794964e-50 | -8.615850e-47 |
| Msa0693210 | Msa0766670 | 0.807556 | 4.771446e-50 | -8.615850e-47 |
| Msa0706390 | Msa0766670 | 0.800878 | 1.171952e-48 | -8.615850e-47 |
| Msa0742510 | Msa0766670 | 0.822585 | 2.189009e-53 | -8.615850e-47 |
| Msa0743530 | Msa0766670 | 0.865808 | 4.512184e-65 | -8.615850e-47 |
| Msa0744090 | Msa0766670 | 0.813713 | 2.226191e-51 | -8.615850e-47 |
| Msa0744100 | Msa0766670 | 0.810921 | 9.061719e-51 | -8.615850e-47 |
| Msa0744180 | Msa0766670 | 0.803870 | 2.836430e-49 | -8.615850e-47 |
| Msa0751010 | Msa0766670 | 0.801580 | 8.420862e-49 | -8.615850e-47 |
| Msa0756930 | Msa0766670 | 0.801735 | 7.826700e-49 | -8.615850e-47 |
| Msa0766670 | Msa0779550 | 0.807410 | 5.123967e-50 | -8.615850e-47 |
| Msa0766670 | Msa0781270 | 0.810824 | 9.513969e-51 | -8.615850e-47 |
| Msa0766670 | Msa0788120 | 0.801815 | 7.534123e-49 | -8.615850e-47 |
| Msa0766670 | Msa0794050 | 0.818023 | 2.432917e-52 | -8.615850e-47 |
| Msa0766670 | Msa0795660 | 0.802882 | 4.543190e-49 | -8.615850e-47 |
| Msa0766670 | Msa0814250 | 0.826446 | 2.701520e-54 | -8.615850e-47 |
| Msa0766670 | Msa0818770 | 0.830586 | 2.701108e-55 | -8.615850e-47 |
| Msa0766670 | Msa0822170 | 0.879325 | 1.366432e-69 | -8.615850e-47 |
| Msa0766670 | Msa0822180 | 0.833995 | 3.871675e-56 | -8.615850e-47 |
| Msa0766670 | Msa0825270 | 0.824992 | 5.975893e-54 | -8.615850e-47 |
| Msa0766670 | Msa0825280 | 0.813346 | 2.681909e-51 | -8.615850e-47 |
| Msa0766670 | Msa0838370 | 0.831086 | 2.036821e-55 | -8.615850e-47 |
| Msa0766670 | Msa0846400 | 0.828608 | 8.179407e-55 | -8.615850e-47 |
| Msa0766670 | Msa0851470 | 0.805948 | 1.043353e-49 | -8.615850e-47 |
| Msa0766670 | Msa0858440 | 0.871366 | 7.216662e-67 | -8.615850e-47 |
| Msa0766670 | Msa0869010 | 0.815525 | 8.842134e-52 | -8.615850e-47 |
| Msa0766670 | Msa0882730 | 0.837008 | 6.694563e-57 | -8.615850e-47 |
| Msa0766670 | Msa0883520 | 0.810804 | 9.606447e-51 | -8.615850e-47 |
| Msa0766670 | Msa0888940 | 0.806799 | 6.901771e-50 | -8.615850e-47 |
| Msa0766670 | Msa0921870 | 0.864843 | 9.083990e-65 | -8.615850e-47 |
| Msa0766670 | Msa0924150 | -0.820409 | 6.965756e-53 | -8.615850e-47 |
| Msa0766670 | Msa0928120 | 0.838182 | 3.347021e-57 | -8.615850e-47 |
| Msa0766670 | Msa0943170 | 0.809536 | 1.802806e-50 | -8.615850e-47 |
| Msa0766670 | Msa0943270 | 0.805014 | 1.637778e-49 | -8.615850e-47 |
| Msa0766670 | Msa0947800 | 0.823483 | 1.351865e-53 | -8.615850e-47 |
| Msa0766670 | Msa0957450 | -0.814659 | 1.376307e-51 | -8.615850e-47 |
| Msa0766670 | Msa0960830 | 0.833940 | 3.994425e-56 | -8.615850e-47 |
| Msa0766670 | Msa0963020 | 0.841601 | 4.305151e-58 | -8.615850e-47 |
| Msa0766670 | Msa0994290 | 0.820509 | 6.608129e-53 | -8.615850e-47 |
| Msa0766670 | Msa0997430 | 0.814173 | 1.762820e-51 | -8.615850e-47 |
| Msa0766670 | Msa1010460 | 0.836680 | 8.120905e-57 | -8.615850e-47 |
| Msa0766670 | Msa1017510 | 0.842589 | 2.357448e-58 | -8.615850e-47 |
| Msa0766670 | Msa1025940 | 0.837940 | 3.863481e-57 | -8.615850e-47 |
| Msa0766670 | Msa1030930 | 0.810134 | 1.340293e-50 | -8.615850e-47 |
| Msa0766670 | Msa1033720 | 0.812088 | 5.056044e-51 | -8.615850e-47 |
| Msa0766670 | Msa1036740 | 0.802963 | 4.372008e-49 | -8.615850e-47 |
| Msa0766670 | Msa1037510 | 0.831336 | 1.768733e-55 | -8.615850e-47 |
| Msa0766670 | Msa1064560 | 0.810090 | 1.370254e-50 | -8.615850e-47 |
| Msa0766670 | Msa1070050 | 0.832895 | 7.281452e-56 | -8.615850e-47 |
| Msa0766670 | Msa1070390 | 0.852205 | 5.377827e-61 | -8.615850e-47 |
| Msa0766670 | Msa1073400 | 0.825895 | 3.652458e-54 | -8.615850e-47 |
| Msa0766670 | Msa1073590 | 0.809970 | 1.453844e-50 | -8.615850e-47 |
| Msa0766670 | Msa1083880 | 0.808659 | 2.778353e-50 | -8.615850e-47 |
| Msa0766670 | Msa1089270 | 0.823866 | 1.099739e-53 | -8.615850e-47 |
| Msa0766670 | Msa1089740 | -0.825722 | 4.013613e-54 | -8.615850e-47 |
| Msa0766670 | Msa1100530 | -0.820221 | 7.691124e-53 | -8.615850e-47 |
| Msa0766670 | Msa1113880 | 0.816379 | 5.702165e-52 | -8.615850e-47 |
| Msa0766670 | Msa1123350 | 0.804372 | 2.229581e-49 | -8.615850e-47 |
| Msa0766670 | Msa1127540 | 0.808608 | 2.848458e-50 | -8.615850e-47 |
| Msa0766670 | Msa1127590 | 0.800235 | 1.585273e-48 | -8.615850e-47 |
| Msa0766670 | Msa1128990 | 0.812223 | 4.724551e-51 | -8.615850e-47 |
| Msa0766670 | Msa1135810 | -0.802269 | 6.078821e-49 | -8.615850e-47 |
| Msa0766670 | Msa1158770 | 0.804740 | 1.868566e-49 | -8.615850e-47 |
| Msa0766670 | Msa1160360 | 0.811312 | 7.457193e-51 | -8.615850e-47 |
| Msa0766670 | Msa1165780 | 0.802308 | 5.967347e-49 | -8.615850e-47 |
| Msa0766670 | Msa1166870 | 0.813790 | 2.141386e-51 | -8.615850e-47 |
| Msa0766670 | Msa1176980 | 0.819249 | 1.282604e-52 | -8.615850e-47 |
| Msa0766670 | Msa1178050 | 0.810748 | 9.877163e-51 | -8.615850e-47 |
| Msa0766670 | Msa1179980 | 0.810954 | 8.916630e-51 | -8.615850e-47 |
| Msa0766670 | Msa1188560 | 0.832068 | 1.167437e-55 | -8.615850e-47 |
| Msa0766670 | Msa1192850 | 0.815086 | 1.106995e-51 | -8.615850e-47 |
| Msa0766670 | Msa1199290 | 0.813431 | 2.568600e-51 | -8.615850e-47 |
| Msa0766670 | Msa1201830 | 0.849124 | 3.954991e-60 | -8.615850e-47 |
| Msa0766670 | Msa1203900 | 0.826832 | 2.184780e-54 | -8.615850e-47 |
| Msa0766670 | Msa1205480 | 0.824547 | 7.607128e-54 | -8.615850e-47 |
| Msa0766670 | Msa1206650 | 0.818459 | 1.938646e-52 | -8.615850e-47 |
| Msa0766670 | Msa1207730 | 0.855347 | 6.705493e-62 | -8.615850e-47 |
| Msa0766670 | Msa1211350 | 0.801761 | 7.729482e-49 | -8.615850e-47 |
| Msa0766670 | Msa1211830 | 0.800203 | 1.608831e-48 | -8.615850e-47 |
| Msa0766670 | Msa1227690 | 0.833925 | 4.029362e-56 | -8.615850e-47 |
| Msa0766670 | Msa1234980 | 0.827510 | 1.503785e-54 | -8.615850e-47 |
| Msa0766670 | Msa1270620 | 0.822447 | 2.357962e-53 | -8.615850e-47 |
| Msa0766670 | Msa1270690 | 0.812245 | 4.671638e-51 | -8.615850e-47 |
| Msa0766670 | Msa1294840 | 0.821172 | 4.649916e-53 | -8.615850e-47 |
| Msa0766670 | Msa1296300 | 0.816592 | 5.108433e-52 | -8.615850e-47 |
| Msa0766670 | Msa1299700 | 0.840236 | 9.816553e-58 | -8.615850e-47 |
| Msa0766670 | Msa1306990 | 0.800226 | 1.591835e-48 | -8.615850e-47 |
| Msa0766670 | Msa1310690 | 0.843157 | 1.665064e-58 | -8.615850e-47 |
| Msa0766670 | Msa1327490 | 0.803834 | 2.885110e-49 | -8.615850e-47 |
| Msa0766670 | Msa1332220 | 0.823629 | 1.249373e-53 | -8.615850e-47 |
| Msa0766670 | Msa1340830 | 0.812385 | 4.354583e-51 | -8.615850e-47 |
| Msa0766670 | Msa1344310 | 0.825983 | 3.480522e-54 | -8.615850e-47 |
| Msa0766670 | Msa1344850 | 0.851518 | 8.422008e-61 | -8.615850e-47 |
| Msa0766670 | Msa1349570 | 0.802990 | 4.314734e-49 | -8.615850e-47 |
| Msa0766670 | Msa1355700 | 0.802868 | 4.572927e-49 | -8.615850e-47 |
| Msa0766670 | Msa1364160 | 0.821031 | 5.011561e-53 | -8.615850e-47 |
| Msa0766670 | Msa1369190 | 0.812868 | 3.413166e-51 | -8.615850e-47 |
| Msa0766670 | Msa1372310 | 0.822455 | 2.346867e-53 | -8.615850e-47 |
| Msa0766670 | Msa1380970 | 0.810905 | 9.135674e-51 | -8.615850e-47 |
| Msa0766670 | Msa1396870 | 0.809969 | 1.454752e-50 | -8.615850e-47 |
| Msa0766670 | Msa1397940 | 0.802312 | 5.954623e-49 | -8.615850e-47 |
| Msa0766670 | Msa1400820 | 0.829157 | 6.023044e-55 | -8.615850e-47 |
| Msa0766670 | Msa1409260 | 0.804055 | 2.595928e-49 | -8.615850e-47 |
| Msa0766670 | Msa1411950 | 0.824520 | 7.722244e-54 | -8.615850e-47 |
| Msa0766670 | Msa1416260 | 0.823643 | 1.240252e-53 | -8.615850e-47 |
| Msa0766670 | Msa1433600 | 0.831855 | 1.317668e-55 | -8.615850e-47 |
| Msa0766670 | Msa1435770 | 0.840190 | 1.009548e-57 | -8.615850e-47 |
| Msa0766670 | Msa1450720 | 0.801566 | 8.476120e-49 | -8.615850e-47 |
| Msa0766670 | Msa1459960 | 0.816077 | 6.660405e-52 | -8.615850e-47 |
| Msa0766670 | Msa1462470 | 0.819412 | 1.177252e-52 | -8.615850e-47 |
| Msa0126840 | Msa0766670 | 0.814671 | 1.368375e-51 | -8.615850e-47 |
| Msa0126880 | Msa0766670 | 0.817766 | 2.780703e-52 | -8.615850e-47 |
| Msa0127040 | Msa0766670 | 0.808620 | 2.831702e-50 | -8.615850e-47 |
| Msa0127850 | Msa0766670 | 0.837206 | 5.959013e-57 | -8.615850e-47 |
| Msa0131450 | Msa0766670 | 0.823434 | 1.388091e-53 | -8.615850e-47 |
| Msa0145150 | Msa0766670 | 0.804295 | 2.313275e-49 | -8.615850e-47 |
| Msa0146080 | Msa0766670 | 0.823741 | 1.176269e-53 | -8.615850e-47 |
| Msa0166750 | Msa0766670 | 0.844496 | 7.293625e-59 | -8.615850e-47 |
| Msa0168940 | Msa0766670 | 0.801759 | 7.738689e-49 | -8.615850e-47 |
| Msa0174000 | Msa0766670 | 0.845838 | 3.162471e-59 | -8.615850e-47 |
| Msa0183870 | Msa0766670 | 0.812003 | 5.274784e-51 | -8.615850e-47 |
| Msa0193600 | Msa0766670 | 0.840008 | 1.125761e-57 | -8.615850e-47 |
| Msa0198530 | Msa0766670 | 0.813740 | 2.195959e-51 | -8.615850e-47 |
| Msa0221600 | Msa0766670 | 0.802652 | 5.066984e-49 | -8.615850e-47 |
| Msa0225340 | Msa0766670 | 0.806318 | 8.719407e-50 | -8.615850e-47 |
| Msa0384670 | Msa0766670 | 0.816536 | 5.257698e-52 | -8.615850e-47 |
| Msa0384880 | Msa0766670 | 0.830919 | 2.239064e-55 | -8.615850e-47 |
| Msa0387880 | Msa0766670 | -0.807957 | 3.922281e-50 | -8.615850e-47 |
| Msa0413530 | Msa0766670 | 0.801751 | 7.766376e-49 | -8.615850e-47 |
| Msa0432070 | Msa0766670 | 0.802916 | 4.470033e-49 | -8.615850e-47 |
| Msa0434570 | Msa0766670 | 0.809080 | 2.258012e-50 | -8.615850e-47 |
| Msa0434770 | Msa0766670 | 0.820222 | 7.686016e-53 | -8.615850e-47 |
| Msa0436200 | Msa0766670 | 0.812428 | 4.261792e-51 | -8.615850e-47 |
| Msa0439230 | Msa0766670 | 0.803112 | 4.071398e-49 | -8.615850e-47 |
| Msa0439890 | Msa0766670 | 0.827890 | 1.218466e-54 | -8.615850e-47 |
| Msa0462880 | Msa0766670 | 0.819352 | 1.214968e-52 | -8.615850e-47 |
| Msa0478580 | Msa0766670 | 0.841509 | 4.552178e-58 | -8.615850e-47 |
| Msa0479330 | Msa0766670 | 0.829109 | 6.186148e-55 | -8.615850e-47 |
| Msa0242760 | Msa0766670 | 0.803800 | 2.932053e-49 | -8.615850e-47 |
| Msa0244980 | Msa0766670 | 0.800266 | 1.562057e-48 | -8.615850e-47 |
| Msa0245580 | Msa0766670 | 0.808081 | 3.689783e-50 | -8.615850e-47 |
| Msa0247060 | Msa0766670 | 0.818632 | 1.771629e-52 | -8.615850e-47 |
| Msa0262480 | Msa0766670 | 0.826345 | 2.855375e-54 | -8.615850e-47 |
| Msa0265160 | Msa0766670 | 0.800042 | 1.734970e-48 | -8.615850e-47 |
| Msa0266360 | Msa0766670 | 0.801176 | 1.018959e-48 | -8.615850e-47 |
| Msa0273650 | Msa0766670 | 0.839491 | 1.535251e-57 | -8.615850e-47 |
| Msa0291520 | Msa0766670 | 0.818569 | 1.830868e-52 | -8.615850e-47 |
| Msa0300350 | Msa0766670 | 0.804071 | 2.575652e-49 | -8.615850e-47 |
| Msa0304660 | Msa0766670 | 0.801547 | 8.552050e-49 | -8.615850e-47 |
| Msa0310410 | Msa0766670 | 0.801522 | 8.654336e-49 | -8.615850e-47 |
| Msa0317640 | Msa0766670 | 0.806732 | 7.129577e-50 | -8.615850e-47 |
| Msa0324240 | Msa0766670 | 0.804144 | 2.487082e-49 | -8.615850e-47 |
| Msa0331700 | Msa0766670 | 0.803938 | 2.745647e-49 | -8.615850e-47 |
| Msa0342290 | Msa0766670 | 0.819775 | 9.727499e-53 | -8.615850e-47 |
| Msa0359600 | Msa0766670 | 0.802114 | 6.541758e-49 | -8.615850e-47 |
| Msa0363060 | Msa0766670 | 0.809129 | 2.203966e-50 | -8.615850e-47 |
| Msa0503530 | Msa0766670 | 0.812530 | 4.048528e-51 | -8.615850e-47 |
| Msa0533960 | Msa0766670 | -0.822745 | 2.009665e-53 | -8.615850e-47 |
| Msa0534080 | Msa0766670 | 0.814563 | 1.445557e-51 | -8.615850e-47 |
| Msa0549790 | Msa0766670 | 0.806293 | 8.826624e-50 | -8.615850e-47 |
| Msa0550570 | Msa0766670 | 0.828086 | 1.092989e-54 | -8.615850e-47 |
| Msa0578090 | Msa0766670 | 0.816932 | 4.285526e-52 | -8.615850e-47 |
| Msa0581070 | Msa0766670 | 0.803146 | 4.007428e-49 | -8.615850e-47 |
| Msa0593700 | Msa0766670 | 0.811648 | 6.302630e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766670 | MtrunA17_Chr5g0417851 | 98.253 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 4.30e-162 | 447 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766670 | AT3G52220.1 | 65.138 | 218 | 70 | 4 | 1 | 213 | 1 | 217 | 5.14e-91 | 268 |
Find 106 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCTCCATTTCTTCATTT+TGG | 0.047448 | 5_2:+28646003 | None:intergenic |
| GGATATTGGCACTGCCATTT+TGG | 0.220465 | 5_2:-28643046 | Msa0766670:three_prime_UTR |
| GATTCATCTTCAGTCTTTCT+TGG | 0.234428 | 5_2:+28643381 | None:intergenic |
| ATTTACCGTTATCACTTATC+TGG | 0.264081 | 5_2:-28643067 | Msa0766670:three_prime_UTR |
| ACCTCATAATAATGCCAAAA+TGG | 0.295998 | 5_2:+28643032 | None:intergenic |
| GTTATCACTTATCTGGATAT+TGG | 0.318357 | 5_2:-28643060 | Msa0766670:three_prime_UTR |
| TTCTCTTTGTATTTATAGTT+AGG | 0.342744 | 5_2:-28642914 | Msa0766670:three_prime_UTR |
| GTCTTTCTTGGTGATTGATT+AGG | 0.360974 | 5_2:+28643393 | None:intergenic |
| CGAACCCCTTTCGTTGTTGT+TGG | 0.369691 | 5_2:-28648044 | Msa0766670:five_prime_UTR |
| TAACGGTAAATACAGGCTTC+TGG | 0.371032 | 5_2:+28643079 | None:intergenic |
| AAAAGAGAAGACGGGAAGAA+AGG | 0.371187 | 5_2:-28643341 | Msa0766670:CDS |
| TCAAAGGCCCCTCAATTTAT+CGG | 0.374816 | 5_2:+28642722 | None:intergenic |
| CGAGTTGGATGATACATGTT+TGG | 0.376595 | 5_2:+28647973 | None:intergenic |
| CTCTTGCTTTCTTTCCTCAC+GGG | 0.394011 | 5_2:+28643290 | None:intergenic |
| GATTGAATACTCACTCCTCT+TGG | 0.405428 | 5_2:-28643186 | Msa0766670:exon |
| AAAGTCCCAAAATGAAGAAA+TGG | 0.405533 | 5_2:-28646009 | Msa0766670:CDS |
| ATTATTTAGAAAATCGCGTT+TGG | 0.409589 | 5_2:-28648002 | Msa0766670:five_prime_UTR |
| ATGTGAGACCTTTGAGGAAC+CGG | 0.412211 | 5_2:+28643446 | None:intergenic |
| TTGATGGAACAGAGTTTACT+TGG | 0.413980 | 5_2:-28647613 | Msa0766670:intron |
| AAACACAGGGAGAATTATAT+AGG | 0.414477 | 5_2:-28647572 | Msa0766670:CDS |
| TCAAGGCTCCTGTTGGTAGA+TGG | 0.426647 | 5_2:-28647541 | Msa0766670:CDS |
| TTCGCATTGGATGATATTGA+TGG | 0.436274 | 5_2:+28643157 | None:intergenic |
| GAGAAGACGGGAAGAAAGGA+AGG | 0.440522 | 5_2:-28643337 | Msa0766670:CDS |
| ATTGAATACTCACTCCTCTT+GGG | 0.444034 | 5_2:-28643185 | Msa0766670:exon |
| CCTTTCTGCCATCTACCAAC+AGG | 0.451053 | 5_2:+28647533 | None:intergenic |
| TCTCTTGCTTTCTTTCCTCA+CGG | 0.454567 | 5_2:+28643289 | None:intergenic |
| GGTTGCTCTATAGTCCCCTT+AGG | 0.468027 | 5_2:-28642842 | Msa0766670:three_prime_UTR |
| GCTGAAGCAGCAAGGGTTCA+AGG | 0.474043 | 5_2:-28645810 | Msa0766670:CDS |
| TAAGTGATAACGGTAAATAC+AGG | 0.477229 | 5_2:+28643072 | None:intergenic |
| GTTAGGCCTACCATGGTCCT+AGG | 0.479312 | 5_2:-28642897 | Msa0766670:three_prime_UTR |
| TGTGCAGAGAACTCCGCCCT+TGG | 0.480974 | 5_2:-28643476 | Msa0766670:intron |
| GTGCAGAGAACTCCGCCCTT+GGG | 0.482632 | 5_2:-28643475 | Msa0766670:intron |
| GCAGCAAGGGTTCAAGGTGT+TGG | 0.487662 | 5_2:-28645804 | Msa0766670:CDS |
| GGGTCTACAGCAGAAGACTT+AGG | 0.489361 | 5_2:-28645843 | Msa0766670:CDS |
| GAGGAACCGGGTTCTTCCCA+AGG | 0.492669 | 5_2:+28643459 | None:intergenic |
| TTTCAGGGTTGAGCAACCTA+AGG | 0.493942 | 5_2:+28642826 | None:intergenic |
| AATTAAGGAAGAGGAGGAGC+AGG | 0.497912 | 5_2:-28645961 | Msa0766670:CDS |
| ATCGGAATGAATCTTCTGAT+AGG | 0.500284 | 5_2:-28642767 | Msa0766670:three_prime_UTR |
| TCCTAGGGACATTGCAGACA+TGG | 0.501105 | 5_2:-28642881 | Msa0766670:three_prime_UTR |
| AGAGGAGGAGCAGGCAATGA+GGG | 0.501735 | 5_2:-28645952 | Msa0766670:CDS |
| AATGTCATTTCATTTCGCAT+TGG | 0.502603 | 5_2:+28643144 | None:intergenic |
| GTCAATAAGATAGCTTCTGA+TGG | 0.506911 | 5_2:-28642799 | Msa0766670:three_prime_UTR |
| AAAATTCATGTTTATCAAGA+CGG | 0.507020 | 5_2:+28645883 | None:intergenic |
| CTTGGTGATTGATTAGGCAT+AGG | 0.507840 | 5_2:+28643399 | None:intergenic |
| TTCTTCCAACAACAACGAAA+GGG | 0.509660 | 5_2:+28648039 | None:intergenic |
| TGAGGACGACTAGCACGCTT+AGG | 0.512346 | 5_2:+28645912 | None:intergenic |
| TATTATGAGGTGTTTCAAGT+TGG | 0.522662 | 5_2:-28643020 | Msa0766670:three_prime_UTR |
| AGATACTCTCCGATAAATTG+AGG | 0.525366 | 5_2:-28642731 | Msa0766670:three_prime_UTR |
| CCAACTCGAGGTGGCGTCCG+TGG | 0.525837 | 5_2:-28647958 | Msa0766670:CDS |
| CCCATGTCTGCAATGTCCCT+AGG | 0.526245 | 5_2:+28642880 | None:intergenic |
| AGAAAGATAAAGAGAGGAGG+AGG | 0.528808 | 5_2:-28643218 | Msa0766670:CDS |
| ATCAAGATACTTCATGAGCT+TGG | 0.529950 | 5_2:+28642977 | None:intergenic |
| CTTCTGATAGGTTTGTGCAT+TGG | 0.534592 | 5_2:-28642755 | Msa0766670:three_prime_UTR |
| TTCAGGGTTGAGCAACCTAA+GGG | 0.542091 | 5_2:+28642827 | None:intergenic |
| TCGCATTGGATGATATTGAT+GGG | 0.544858 | 5_2:+28643158 | None:intergenic |
| AATATCCAGATAAGTGATAA+CGG | 0.548202 | 5_2:+28643062 | None:intergenic |
| TGGTGTATGTGAGACCTTTG+AGG | 0.550478 | 5_2:+28643440 | None:intergenic |
| ATCAGAAGATTCATTCCGAT+CGG | 0.563793 | 5_2:+28642770 | None:intergenic |
| AATGAGGGAAGCTCTCGGCT+TGG | 0.564929 | 5_2:-28645937 | Msa0766670:CDS |
| GATACTCTCCGATAAATTGA+GGG | 0.565569 | 5_2:-28642730 | Msa0766670:three_prime_UTR |
| GGAAGAACCCGGTTCCTCAA+AGG | 0.565976 | 5_2:-28643454 | Msa0766670:CDS |
| CTGCAATGTCCCTAGGACCA+TGG | 0.571604 | 5_2:+28642887 | None:intergenic |
| GACACAAGAAAGATAAAGAG+AGG | 0.577049 | 5_2:-28643224 | Msa0766670:CDS |
| AAAGACTGAAGATGAATCTG+AGG | 0.577390 | 5_2:-28643376 | Msa0766670:CDS |
| GGTCCCTCATGTTTGCTCAA+AGG | 0.578356 | 5_2:+28642706 | None:intergenic |
| AAGAGGAGGAGCAGGCAATG+AGG | 0.579166 | 5_2:-28645953 | Msa0766670:CDS |
| GTTCTTCCAACAACAACGAA+AGG | 0.579520 | 5_2:+28648038 | None:intergenic |
| TGTGAGACCTTTGAGGAACC+GGG | 0.579529 | 5_2:+28643447 | None:intergenic |
| CCACGGACGCCACCTCGAGT+TGG | 0.580213 | 5_2:+28647958 | None:intergenic |
| AGGAACCGGGTTCTTCCCAA+GGG | 0.580832 | 5_2:+28643460 | None:intergenic |
| ATTCTCGTGATTCAGATGAC+AGG | 0.582090 | 5_2:-28643251 | Msa0766670:CDS |
| TTTCAGAACTAGTAAAGAGA+GGG | 0.582339 | 5_2:-28645863 | Msa0766670:CDS |
| TTAGGCCTACCATGGTCCTA+GGG | 0.585638 | 5_2:-28642896 | Msa0766670:three_prime_UTR |
| AGCAAGAGAAGCGTGAGAAG+CGG | 0.591268 | 5_2:-28643275 | Msa0766670:CDS |
| ATGTAAAAGCTGATAAACAC+AGG | 0.592383 | 5_2:-28647586 | Msa0766670:CDS |
| CCTGTTGGTAGATGGCAGAA+AGG | 0.593241 | 5_2:-28647533 | Msa0766670:intron |
| GTCCCAAAATGAAGAAATGG+AGG | 0.596320 | 5_2:-28646006 | Msa0766670:CDS |
| TGATGGAACAGAGTTTACTT+GGG | 0.599020 | 5_2:-28647612 | Msa0766670:intron |
| CTCCGCCCTTGGGAAGAACC+CGG | 0.601120 | 5_2:-28643465 | Msa0766670:CDS |
| AACCGGGTTCTTCCCAAGGG+CGG | 0.607749 | 5_2:+28643463 | None:intergenic |
| AAGGTCACGCTGAAGCAGCA+AGG | 0.608440 | 5_2:-28645818 | Msa0766670:CDS |
| TCTTCCAACAACAACGAAAG+GGG | 0.610748 | 5_2:+28648040 | None:intergenic |
| CATAGTCTCAAGGCTCCTGT+TGG | 0.611584 | 5_2:-28647548 | Msa0766670:CDS |
| TTATATAGGTCATAGTCTCA+AGG | 0.617267 | 5_2:-28647558 | Msa0766670:CDS |
| ATTTATAGTTAGGCCTACCA+TGG | 0.617982 | 5_2:-28642904 | Msa0766670:three_prime_UTR |
| ACTCGAGGTGGCGTCCGTGG+CGG | 0.620619 | 5_2:-28647955 | Msa0766670:CDS |
| GGGGCCTTTGAGCAAACATG+AGG | 0.623230 | 5_2:-28642710 | Msa0766670:three_prime_UTR |
| AGGTCACGCTGAAGCAGCAA+GGG | 0.623464 | 5_2:-28645817 | Msa0766670:CDS |
| CCTAGGGACATTGCAGACAT+GGG | 0.625805 | 5_2:-28642880 | Msa0766670:three_prime_UTR |
| AAGCGTGCTAGTCGTCCTCA+AGG | 0.629339 | 5_2:-28645909 | Msa0766670:CDS |
| CAGGCAATGAGGGAAGCTCT+CGG | 0.634387 | 5_2:-28645942 | Msa0766670:CDS |
| TTATCAAGACGGTTACCTTG+AGG | 0.642277 | 5_2:+28645894 | None:intergenic |
| GGTCTCACATACACCAGCTG+TGG | 0.651509 | 5_2:-28643433 | Msa0766670:CDS |
| ACAGCAGAAGACTTAGGTGA+AGG | 0.653024 | 5_2:-28645837 | Msa0766670:CDS |
| AATGTCCCTAGGACCATGGT+AGG | 0.660566 | 5_2:+28642891 | None:intergenic |
| AGGAAGAGAAACGTGAAAAG+CGG | 0.661820 | 5_2:-28643317 | Msa0766670:CDS |
| ACAAGAAAGATAAAGAGAGG+AGG | 0.663634 | 5_2:-28643221 | Msa0766670:CDS |
| GGGCCTTTGAGCAAACATGA+GGG | 0.669264 | 5_2:-28642709 | Msa0766670:three_prime_UTR |
| ACTTACGATCTCGACCGCCA+CGG | 0.670052 | 5_2:+28647941 | None:intergenic |
| ATGTATCATCCAACTCGAGG+TGG | 0.688754 | 5_2:-28647967 | Msa0766670:CDS |
| TGTAAAAGCTGATAAACACA+GGG | 0.690058 | 5_2:-28647585 | Msa0766670:CDS |
| ATACTCTCCGATAAATTGAG+GGG | 0.694021 | 5_2:-28642729 | Msa0766670:three_prime_UTR |
| TCAGGGTTGAGCAACCTAAG+GGG | 0.704922 | 5_2:+28642828 | None:intergenic |
| TGAAAAGCGGCATTCCCGTG+AGG | 0.706921 | 5_2:-28643304 | Msa0766670:CDS |
| AACATGTATCATCCAACTCG+AGG | 0.712342 | 5_2:-28647970 | Msa0766670:CDS |
| TATTGATGGGAAAACCCAAG+AGG | 0.726413 | 5_2:+28643171 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAATTATAAATTAAA+TGG | - | chr5_2:28646293-28646312 | Msa0766670:intron | 0.0% |
| !!! | TTTCTAAATAATTTGATTTT+CGG | + | chr5_2:28642694-28642713 | None:intergenic | 10.0% |
| !!! | TTACATTTGTTTTATTTTTA+GGG | - | chr5_2:28645012-28645031 | Msa0766670:intron | 10.0% |
| !! | ATCATATCATATAAATTATT+TGG | - | chr5_2:28645036-28645055 | Msa0766670:intron | 10.0% |
| !!! | ATTTATTTCCTTATTTAATT+AGG | - | chr5_2:28645652-28645671 | Msa0766670:intron | 10.0% |
| !!! | TTTTGTTTTGATATAAATAA+GGG | - | chr5_2:28645683-28645702 | Msa0766670:intron | 10.0% |
| !! | AAAAAATTGAAATATAAAGA+TGG | + | chr5_2:28646699-28646718 | None:intergenic | 10.0% |
| !!! | TTCTAAATAATTTGATTTTC+GGG | + | chr5_2:28642693-28642712 | None:intergenic | 15.0% |
| !! | AATTAAACAAAATAGGAATT+AGG | + | chr5_2:28642909-28642928 | None:intergenic | 15.0% |
| !! | CATTAAATAACTAATGTATT+TGG | + | chr5_2:28643774-28643793 | None:intergenic | 15.0% |
| !! | AAAAATAAAACAAATGTAAC+AGG | + | chr5_2:28645011-28645030 | None:intergenic | 15.0% |
| !!! | GTTACATTTGTTTTATTTTT+AGG | - | chr5_2:28645011-28645030 | Msa0766670:intron | 15.0% |
| !! | AAAACCTAAATATAATACAT+CGG | + | chr5_2:28645113-28645132 | None:intergenic | 15.0% |
| !!! | TTATATTTAGGTTTTTTTCA+TGG | - | chr5_2:28645118-28645137 | Msa0766670:intron | 15.0% |
| !!! | ATATGAAAACTAATTTTAAG+AGG | + | chr5_2:28645610-28645629 | None:intergenic | 15.0% |
| !!! | GTTTTGTTTTGATATAAATA+AGG | - | chr5_2:28645682-28645701 | Msa0766670:intron | 15.0% |
| !!! | TTATATTTTGATTTTTCTCA+TGG | - | chr5_2:28645887-28645906 | Msa0766670:CDS | 15.0% |
| !!! | ATAAATCTTTTAAAAGAATC+AGG | + | chr5_2:28645918-28645937 | None:intergenic | 15.0% |
| !! | TTAAATAAAAAAGCTGATTA+GGG | + | chr5_2:28646459-28646478 | None:intergenic | 15.0% |
| !! | TTTAAATAAAAAAGCTGATT+AGG | + | chr5_2:28646460-28646479 | None:intergenic | 15.0% |
| !! | CAACTTCTATATTAAATAAT+TGG | + | chr5_2:28646956-28646975 | None:intergenic | 15.0% |
| !! | CAATTATTTAATATAGAAGT+TGG | - | chr5_2:28646954-28646973 | Msa0766670:intron | 15.0% |
| !! | TAAGAAATAAGTTACAATAA+TGG | + | chr5_2:28647204-28647223 | None:intergenic | 15.0% |
| !!! | TAATTTTGTTCAAAAGATTT+TGG | + | chr5_2:28648037-28648056 | None:intergenic | 15.0% |
| !! | AAAAAACTACAAATTGAGAA+CGG | - | chr5_2:28642632-28642651 | Msa0766670:three_prime_UTR | 20.0% |
| !! | AATTTGTGAAATTAGGAAAA+CGG | + | chr5_2:28642854-28642873 | None:intergenic | 20.0% |
| !! | GTGGTAAAATTAAACAAAAT+AGG | + | chr5_2:28642916-28642935 | None:intergenic | 20.0% |
| !!! | TGTAAGAATGAATAATTTTG+TGG | + | chr5_2:28642952-28642971 | None:intergenic | 20.0% |
| !! | CATCAGTTTCTTAAAATTAT+AGG | - | chr5_2:28643460-28643479 | Msa0766670:CDS | 20.0% |
| !! | TCTTCAAATTAAGGTTAATT+GGG | + | chr5_2:28643556-28643575 | None:intergenic | 20.0% |
| !!! | AAAACAACTTTTTAGATTCA+TGG | - | chr5_2:28643677-28643696 | Msa0766670:intron | 20.0% |
| !!! | TGTTTATTATAGTCTTGTAT+AGG | - | chr5_2:28643978-28643997 | Msa0766670:intron | 20.0% |
| !! | ATCTAAACTTACAATTACAT+TGG | + | chr5_2:28644433-28644452 | None:intergenic | 20.0% |
| !! | TAAAATTTAAGAAGCTAGAA+AGG | - | chr5_2:28644472-28644491 | Msa0766670:intron | 20.0% |
| !! | AAAAGGACAAAATTTAAAGA+TGG | + | chr5_2:28644635-28644654 | None:intergenic | 20.0% |
| !! | AGAAGAGATAAAAAGAATTA+AGG | - | chr5_2:28644728-28644747 | Msa0766670:intron | 20.0% |
| !! | AAAATTCATGTTTATCAAGA+CGG | + | chr5_2:28644824-28644843 | None:intergenic | 20.0% |
| !!! | AATAAAGCTCTAAAAATCAT+TGG | + | chr5_2:28645386-28645405 | None:intergenic | 20.0% |
| !!! | GTTATGTCTTTTATTTTACT+GGG | + | chr5_2:28645450-28645469 | None:intergenic | 20.0% |
| !!! | TGTTATGTCTTTTATTTTAC+TGG | + | chr5_2:28645451-28645470 | None:intergenic | 20.0% |
| !! | CTCTAAATCCTAATTAAATA+AGG | + | chr5_2:28645663-28645682 | None:intergenic | 20.0% |
| !! | AATTTAAAAAGTAGATGAAG+TGG | - | chr5_2:28646346-28646365 | Msa0766670:intron | 20.0% |
| !!! | CTTTTCAGAAACAAAATTTT+AGG | - | chr5_2:28646421-28646440 | Msa0766670:intron | 20.0% |
| !!! | ATTATAATCGTGCAAATTTT+CGG | + | chr5_2:28646505-28646524 | None:intergenic | 20.0% |
| !!! | AAAACTGTTACTTCAATTAA+AGG | + | chr5_2:28646544-28646563 | None:intergenic | 20.0% |
| !! | ATACAAAGAGAAGATAAAAA+CGG | + | chr5_2:28647782-28647801 | None:intergenic | 20.0% |
| !! | TTCTCTTTGTATTTATAGTT+AGG | - | chr5_2:28647790-28647809 | Msa0766670:intron | 20.0% |
| ! | ATTATTTAGAAAATCGCGTT+TGG | - | chr5_2:28642702-28642721 | Msa0766670:three_prime_UTR | 25.0% |
| ! | ATTGAAATTGAATGAAGAGA+TGG | + | chr5_2:28642793-28642812 | None:intergenic | 25.0% |
| ! | AAGAAGGAATTTGTGAAATT+AGG | + | chr5_2:28642861-28642880 | None:intergenic | 25.0% |
| !! | GAATAATTTTGTGGAAATCA+GGG | + | chr5_2:28642943-28642962 | None:intergenic | 25.0% |
| !! | TGAATAATTTTGTGGAAATC+AGG | + | chr5_2:28642944-28642963 | None:intergenic | 25.0% |
| !! | TATGATTTGTGATTGACAAT+AGG | - | chr5_2:28643366-28643385 | Msa0766670:CDS | 25.0% |
| ! | TTCTTAAAATTATAGGCTCT+TGG | - | chr5_2:28643467-28643486 | Msa0766670:CDS | 25.0% |
| ! | TCTTAAAATTATAGGCTCTT+GGG | - | chr5_2:28643468-28643487 | Msa0766670:CDS | 25.0% |
| ! | CTTCAAATTAAGGTTAATTG+GGG | + | chr5_2:28643555-28643574 | None:intergenic | 25.0% |
| ! | GTCTTCAAATTAAGGTTAAT+TGG | + | chr5_2:28643557-28643576 | None:intergenic | 25.0% |
| !!! | TTTTAGCTTATAAATGTGAC+CGG | + | chr5_2:28643659-28643678 | None:intergenic | 25.0% |
| ! | CATGGAATAATTAATGTATC+TGG | - | chr5_2:28643695-28643714 | Msa0766670:intron | 25.0% |
| ! | CATGGAATAATTAATGTATC+TGG | - | chr5_2:28643695-28643714 | Msa0766670:intron | 25.0% |
| ! | ATTCAATCAAAACTGTTGAT+CGG | - | chr5_2:28644047-28644066 | Msa0766670:intron | 25.0% |
| ! | AGTAAATTGGCTGTTTAAAT+AGG | - | chr5_2:28644083-28644102 | Msa0766670:intron | 25.0% |
| !!! | TAAAATTTTGCTCTAGACTT+GGG | + | chr5_2:28644173-28644192 | None:intergenic | 25.0% |
| !!! | TTAAAATTTTGCTCTAGACT+TGG | + | chr5_2:28644174-28644193 | None:intergenic | 25.0% |
| !!! | CTTTTAATTCAAAGCTCATA+GGG | - | chr5_2:28644195-28644214 | Msa0766670:intron | 25.0% |
| !!! | TTTTAATTCAAAGCTCATAG+GGG | - | chr5_2:28644196-28644215 | Msa0766670:intron | 25.0% |
| !!! | TTTTCGTCATTTTGGTTTTA+TGG | - | chr5_2:28644295-28644314 | Msa0766670:intron | 25.0% |
| !!! | TCATTTTGGTTTTATGGTTT+AGG | - | chr5_2:28644301-28644320 | Msa0766670:intron | 25.0% |
| ! | AAACTTACAATTACATTGGA+TGG | + | chr5_2:28644429-28644448 | None:intergenic | 25.0% |
| ! | ATAAACATTAGACTGTTGTT+TGG | - | chr5_2:28644587-28644606 | Msa0766670:intron | 25.0% |
| !! | ATTTTGTCCTTTTATTCAAC+AGG | - | chr5_2:28644642-28644661 | Msa0766670:intron | 25.0% |
| !! | TTTTGTCCTTTTATTCAACA+GGG | - | chr5_2:28644643-28644662 | Msa0766670:intron | 25.0% |
| ! | GATAAAAAGAATTAAGGAAG+AGG | - | chr5_2:28644734-28644753 | Msa0766670:intron | 25.0% |
| ! | ATATTTCGAAAGTAATACAG+TGG | - | chr5_2:28644956-28644975 | Msa0766670:intron | 25.0% |
| ! | TATTTCGAAAGTAATACAGT+GGG | - | chr5_2:28644957-28644976 | Msa0766670:intron | 25.0% |
| !! | TGTAAATCTTCTGAAAGATT+GGG | + | chr5_2:28645150-28645169 | None:intergenic | 25.0% |
| !! | ATGTAAATCTTCTGAAAGAT+TGG | + | chr5_2:28645151-28645170 | None:intergenic | 25.0% |
| !!! | GTAGTTACCAAGTTTAATTT+TGG | - | chr5_2:28645310-28645329 | Msa0766670:intron | 25.0% |
| ! | ATTTGTAATCATGCAATTCT+TGG | + | chr5_2:28645504-28645523 | None:intergenic | 25.0% |
| ! | GATATGAAAAGACTTAACAA+CGG | + | chr5_2:28645711-28645730 | None:intergenic | 25.0% |
| !!! | GAGTTCTAGAATTGTAAATA+TGG | + | chr5_2:28645760-28645779 | None:intergenic | 25.0% |
| ! | CAAATTAAATCGAATGGAAA+TGG | + | chr5_2:28646174-28646193 | None:intergenic | 25.0% |
| ! | TTCTCTCAAATTAAATCGAA+TGG | + | chr5_2:28646180-28646199 | None:intergenic | 25.0% |
| !! | AAAAACAGCAACTTGATTTT+TGG | - | chr5_2:28646198-28646217 | Msa0766670:intron | 25.0% |
| ! | AAATGGTTACAAAAATGAAC+CGG | - | chr5_2:28646310-28646329 | Msa0766670:intron | 25.0% |
| !! | ATGAAGTGGCTAATTTTTAT+TGG | - | chr5_2:28646360-28646379 | Msa0766670:intron | 25.0% |
| !!! | ACTTTTTCGCCATATAATAA+AGG | + | chr5_2:28646592-28646611 | None:intergenic | 25.0% |
| ! | CTATTTCCAAATAATAGTTG+TGG | + | chr5_2:28646624-28646643 | None:intergenic | 25.0% |
| ! | ATGTGAAAACTACTTAACAA+GGG | - | chr5_2:28646892-28646911 | Msa0766670:intron | 25.0% |
| ! | TAAAATATGAATGCTTAGCT+TGG | - | chr5_2:28646930-28646949 | Msa0766670:intron | 25.0% |
| !!! | TTTTGAAATAATGACAGACA+AGG | - | chr5_2:28647033-28647052 | Msa0766670:intron | 25.0% |
| !! | TTTGAAATAATGACAGACAA+GGG | - | chr5_2:28647034-28647053 | Msa0766670:intron | 25.0% |
| ! | ACAAATAATTTCGTAAGCAA+AGG | + | chr5_2:28647164-28647183 | None:intergenic | 25.0% |
| ! | AATAAGTTACAATAATGGCA+CGG | + | chr5_2:28647199-28647218 | None:intergenic | 25.0% |
| ! | AAAGTAGAAAAAAGAGAAGA+CGG | - | chr5_2:28647354-28647373 | Msa0766670:intron | 25.0% |
| !!! | CTAGTTTCATGACTTATTTT+CGG | - | chr5_2:28647589-28647608 | Msa0766670:CDS | 25.0% |
| ! | AATATCCAGATAAGTGATAA+CGG | + | chr5_2:28647645-28647664 | None:intergenic | 25.0% |
| !!! | ATCTTATTGACCTTTTTTCA+GGG | + | chr5_2:28647896-28647915 | None:intergenic | 25.0% |
| !!! | TATCTTATTGACCTTTTTTC+AGG | + | chr5_2:28647897-28647916 | None:intergenic | 25.0% |
| !!! | GATTTTGGAAATTGCAATAT+AGG | + | chr5_2:28648022-28648041 | None:intergenic | 25.0% |
| TGAAATTAGGAAAACGGAAA+AGG | + | chr5_2:28642848-28642867 | None:intergenic | 30.0% | |
| !! | GTTGTGTTTCTTACTTTTGA+TGG | - | chr5_2:28643075-28643094 | Msa0766670:three_prime_UTR | 30.0% |
| ATGTAAAAGCTGATAAACAC+AGG | - | chr5_2:28643118-28643137 | Msa0766670:three_prime_UTR | 30.0% | |
| TGTAAAAGCTGATAAACACA+GGG | - | chr5_2:28643119-28643138 | Msa0766670:three_prime_UTR | 30.0% | |
| AAACACAGGGAGAATTATAT+AGG | - | chr5_2:28643132-28643151 | Msa0766670:three_prime_UTR | 30.0% | |
| TTATATAGGTCATAGTCTCA+AGG | - | chr5_2:28643146-28643165 | Msa0766670:three_prime_UTR | 30.0% | |
| TGAATTAAAGGAGTAAGGTA+AGG | + | chr5_2:28643220-28643239 | None:intergenic | 30.0% | |
| CTGTTTGAATTAAAGGAGTA+AGG | + | chr5_2:28643225-28643244 | None:intergenic | 30.0% | |
| TACTCCTTTAATTCAAACAG+CGG | - | chr5_2:28643225-28643244 | Msa0766670:CDS | 30.0% | |
| TAGTCACATCATATAGTCTT+CGG | + | chr5_2:28643427-28643446 | None:intergenic | 30.0% | |
| CTTAAAATTATAGGCTCTTG+GGG | - | chr5_2:28643469-28643488 | Msa0766670:CDS | 30.0% | |
| TTTGTTAGCAATATCGTTTG+CGG | - | chr5_2:28643494-28643513 | Msa0766670:intron | 30.0% | |
| ! | GATCTAAGGTCTTCAAATTA+AGG | + | chr5_2:28643565-28643584 | None:intergenic | 30.0% |
| ! | GTCACAACTTTTTAGATTCA+TGG | - | chr5_2:28643717-28643736 | Msa0766670:intron | 30.0% |
| CCAATCATATACAATGCAAA+AGG | + | chr5_2:28643858-28643877 | None:intergenic | 30.0% | |
| ! | CCTTTTGCATTGTATATGAT+TGG | - | chr5_2:28643855-28643874 | Msa0766670:intron | 30.0% |
| ! | CAAAGAGCATAAGGAAATTT+CGG | + | chr5_2:28643925-28643944 | None:intergenic | 30.0% |
| TCAGTCTTTGCTTAGTAAAT+TGG | - | chr5_2:28644070-28644089 | Msa0766670:intron | 30.0% | |
| ! | AAGATCTGAAGTTTCTTCTA+TGG | - | chr5_2:28644135-28644154 | Msa0766670:intron | 30.0% |
| !! | CCTATGAGCTTTGAATTAAA+AGG | + | chr5_2:28644197-28644216 | None:intergenic | 30.0% |
| !! | CCTTTTAATTCAAAGCTCAT+AGG | - | chr5_2:28644194-28644213 | Msa0766670:intron | 30.0% |
| !!! | CAGCTTTATTTTCGTCATTT+TGG | - | chr5_2:28644287-28644306 | Msa0766670:intron | 30.0% |
| TGGCTATTCACATCTAAATA+AGG | - | chr5_2:28644607-28644626 | Msa0766670:intron | 30.0% | |
| GGCTATTCACATCTAAATAA+GGG | - | chr5_2:28644608-28644627 | Msa0766670:intron | 30.0% | |
| AAAGTCCCAAAATGAAGAAA+TGG | - | chr5_2:28644695-28644714 | Msa0766670:intron | 30.0% | |
| AAAAAGAATTAAGGAAGAGG+AGG | - | chr5_2:28644737-28644756 | Msa0766670:intron | 30.0% | |
| ! | TTTTCAGAACTAGTAAAGAG+AGG | - | chr5_2:28644840-28644859 | Msa0766670:intron | 30.0% |
| TTTCAGAACTAGTAAAGAGA+GGG | - | chr5_2:28644841-28644860 | Msa0766670:intron | 30.0% | |
| TTATTTGGATAAGAACAGCT+AGG | - | chr5_2:28645051-28645070 | Msa0766670:intron | 30.0% | |
| CGGACTCAAATAATAATCTT+AGG | + | chr5_2:28645093-28645112 | None:intergenic | 30.0% | |
| GAGTCCGATGTATTATATTT+AGG | - | chr5_2:28645106-28645125 | Msa0766670:intron | 30.0% | |
| !! | AGTTATGATTTTTCGAAGCA+TGG | - | chr5_2:28645235-28645254 | Msa0766670:intron | 30.0% |
| !! | ACCAAGTTTAATTTTGGTCT+TGG | - | chr5_2:28645316-28645335 | Msa0766670:intron | 30.0% |
| ACCAAGACCAAAATTAAACT+TGG | + | chr5_2:28645320-28645339 | None:intergenic | 30.0% | |
| !!! | AAGTTTAATTTTGGTCTTGG+TGG | - | chr5_2:28645319-28645338 | Msa0766670:intron | 30.0% |
| !!! | AGCAAATGCTTTTAGCTTAT+AGG | - | chr5_2:28645410-28645429 | Msa0766670:intron | 30.0% |
| !!! | TTTTATTTTACTGGGCTGTT+AGG | + | chr5_2:28645442-28645461 | None:intergenic | 30.0% |
| ACTTATTTGTGCTTGTTTGA+AGG | + | chr5_2:28645556-28645575 | None:intergenic | 30.0% | |
| AACAAACTGTTTAAGTCGTA+GGG | + | chr5_2:28645815-28645834 | None:intergenic | 30.0% | |
| AAACAAACTGTTTAAGTCGT+AGG | + | chr5_2:28645816-28645835 | None:intergenic | 30.0% | |
| ! | TAAACAGTTTGTTTGCTTCT+AGG | - | chr5_2:28645822-28645841 | Msa0766670:CDS | 30.0% |
| AAAACTGAACTTTGACACAT+TGG | + | chr5_2:28645992-28646011 | None:intergenic | 30.0% | |
| !!! | AGTTTTTTTGAAGCATGAGA+TGG | - | chr5_2:28646006-28646025 | Msa0766670:CDS | 30.0% |
| CAAAAAACAGTCTAGTAAGT+GGG | - | chr5_2:28646031-28646050 | Msa0766670:CDS | 30.0% | |
| AAAAAACAGTCTAGTAAGTG+GGG | - | chr5_2:28646032-28646051 | Msa0766670:CDS | 30.0% | |
| GAATGGAAATGGAAAGTTAA+TGG | + | chr5_2:28646163-28646182 | None:intergenic | 30.0% | |
| !!! | AGAAACATGAATGGTTTTAG+TGG | - | chr5_2:28646227-28646246 | Msa0766670:intron | 30.0% |
| !!! | GAAACATGAATGGTTTTAGT+GGG | - | chr5_2:28646228-28646247 | Msa0766670:intron | 30.0% |
| !!! | AAACATGAATGGTTTTAGTG+GGG | - | chr5_2:28646229-28646248 | Msa0766670:intron | 30.0% |
| TAAATTTCTTTACCTGCTAC+CGG | + | chr5_2:28646332-28646351 | None:intergenic | 30.0% | |
| ! | GAAGTAACAGTTTTTGTTGA+AGG | - | chr5_2:28646550-28646569 | Msa0766670:intron | 30.0% |
| ! | ATATCCCTTATTTGTTAAGC+TGG | - | chr5_2:28646858-28646877 | Msa0766670:intron | 30.0% |
| GATGTGAAAACTACTTAACA+AGG | - | chr5_2:28646891-28646910 | Msa0766670:intron | 30.0% | |
| TTAATATAGAAGTTGGCTGT+TGG | - | chr5_2:28646961-28646980 | Msa0766670:intron | 30.0% | |
| CAAGTTTGTCATTCTAACTT+TGG | - | chr5_2:28647002-28647021 | Msa0766670:intron | 30.0% | |
| AAGTAGAAAAAAGAGAAGAC+GGG | - | chr5_2:28647355-28647374 | Msa0766670:intron | 30.0% | |
| ! | AATGTCATTTCATTTCGCAT+TGG | + | chr5_2:28647563-28647582 | None:intergenic | 30.0% |
| !! | TAAGTGATAACGGTAAATAC+AGG | + | chr5_2:28647635-28647654 | None:intergenic | 30.0% |
| ATTTACCGTTATCACTTATC+TGG | - | chr5_2:28647637-28647656 | Msa0766670:intron | 30.0% | |
| GTTATCACTTATCTGGATAT+TGG | - | chr5_2:28647644-28647663 | Msa0766670:intron | 30.0% | |
| ACCTCATAATAATGCCAAAA+TGG | + | chr5_2:28647675-28647694 | None:intergenic | 30.0% | |
| ! | TATTATGAGGTGTTTCAAGT+TGG | - | chr5_2:28647684-28647703 | Msa0766670:intron | 30.0% |
| TTCTTCCAACAACAACGAAA+GGG | + | chr5_2:28642668-28642687 | None:intergenic | 35.0% | |
| ACGGAAAAGGATTGAATAGT+TGG | + | chr5_2:28642835-28642854 | None:intergenic | 35.0% | |
| GAATGAGATGGAATTGAAGA+AGG | + | chr5_2:28642877-28642896 | None:intergenic | 35.0% | |
| ! | AGGAGAAAGTATGAATGAGA+TGG | + | chr5_2:28642889-28642908 | None:intergenic | 35.0% |
| TTGATGGAACAGAGTTTACT+TGG | - | chr5_2:28643091-28643110 | Msa0766670:three_prime_UTR | 35.0% | |
| TGATGGAACAGAGTTTACTT+GGG | - | chr5_2:28643092-28643111 | Msa0766670:three_prime_UTR | 35.0% | |
| ATAGCCGCTGTTTGAATTAA+AGG | + | chr5_2:28643232-28643251 | None:intergenic | 35.0% | |
| GAAGACTATATGATGTGACT+AGG | - | chr5_2:28643426-28643445 | Msa0766670:CDS | 35.0% | |
| ATGATGTGACTAGGACATTA+TGG | - | chr5_2:28643435-28643454 | Msa0766670:CDS | 35.0% | |
| TTGCTTATAAATGTGACCAG+AGG | - | chr5_2:28643811-28643830 | Msa0766670:intron | 35.0% | |
| TGCTTATAAATGTGACCAGA+GGG | - | chr5_2:28643812-28643831 | Msa0766670:intron | 35.0% | |
| ! | GAAGAAAAGCAAAGAGCATA+AGG | + | chr5_2:28643934-28643953 | None:intergenic | 35.0% |
| !! | CTCTTTGCTTTTCTTCAACA+TGG | - | chr5_2:28643938-28643957 | Msa0766670:intron | 35.0% |
| TTGAATCACACACATAGAAC+AGG | + | chr5_2:28644033-28644052 | None:intergenic | 35.0% | |
| TTAAGGAGAAACTTAGGTGA+TGG | + | chr5_2:28644231-28644250 | None:intergenic | 35.0% | |
| TTTATAAGCAACCTAGGAGA+AGG | + | chr5_2:28644547-28644566 | None:intergenic | 35.0% | |
| TTCTCCTAGGTTGCTTATAA+AGG | - | chr5_2:28644546-28644565 | Msa0766670:intron | 35.0% | |
| TCTCCTAGGTTGCTTATAAA+GGG | - | chr5_2:28644547-28644566 | Msa0766670:intron | 35.0% | |
| GTCTTTCCCTGTTGAATAAA+AGG | + | chr5_2:28644652-28644671 | None:intergenic | 35.0% | |
| !!! | AAGACCTTTTTTGGTATACC+CGG | - | chr5_2:28644667-28644686 | Msa0766670:intron | 35.0% |
| !!! | ATTTTGGGACTTTTTATCCC+GGG | + | chr5_2:28644688-28644707 | None:intergenic | 35.0% |
| !!! | CATTTTGGGACTTTTTATCC+CGG | + | chr5_2:28644689-28644708 | None:intergenic | 35.0% |
| ! | AGCCTCCATTTCTTCATTTT+GGG | + | chr5_2:28644703-28644722 | None:intergenic | 35.0% |
| TACTAACTACAGAGAGGTTT+AGG | + | chr5_2:28645293-28645312 | None:intergenic | 35.0% | |
| !!! | CCACTTACTAGACTGTTTTT+TGG | + | chr5_2:28646033-28646052 | None:intergenic | 35.0% |
| CCAAAAAACAGTCTAGTAAG+TGG | - | chr5_2:28646030-28646049 | Msa0766670:CDS | 35.0% | |
| ! | GATATGCCAAAGTTCTGTTT+TGG | - | chr5_2:28646109-28646128 | Msa0766670:intron | 35.0% |
| CAAAAGCCAAAACAGAACTT+TGG | + | chr5_2:28646118-28646137 | None:intergenic | 35.0% | |
| ! | AATGGAGTTGTAGCTTTTCA+TGG | + | chr5_2:28646145-28646164 | None:intergenic | 35.0% |
| ! | TTCTGAAAAGAGAAATGCCA+AGG | + | chr5_2:28646411-28646430 | None:intergenic | 35.0% |
| TGTTGAAGGATCACAACAAA+CGG | - | chr5_2:28646564-28646583 | Msa0766670:intron | 35.0% | |
| CAAACGGGACCTTTATTATA+TGG | - | chr5_2:28646580-28646599 | Msa0766670:intron | 35.0% | |
| TCCACTCCACAACTATTATT+TGG | - | chr5_2:28646615-28646634 | Msa0766670:intron | 35.0% | |
| TCCAAATAATAGTTGTGGAG+TGG | + | chr5_2:28646619-28646638 | None:intergenic | 35.0% | |
| CACTAACATAGACATTAGCT+TGG | + | chr5_2:28646723-28646742 | None:intergenic | 35.0% | |
| ! | GTCTATGTTAGTGTTACTAG+TGG | - | chr5_2:28646730-28646749 | Msa0766670:intron | 35.0% |
| ! | TAGTGTTACTAGTGGTTTCA+AGG | - | chr5_2:28646738-28646757 | Msa0766670:intron | 35.0% |
| ! | AGTGTTACTAGTGGTTTCAA+GGG | - | chr5_2:28646739-28646758 | Msa0766670:intron | 35.0% |
| TAACATTGTGAAATCACCCT+AGG | - | chr5_2:28646798-28646817 | Msa0766670:intron | 35.0% | |
| TAAGGGATATGAGCAATTAC+AGG | + | chr5_2:28646848-28646867 | None:intergenic | 35.0% | |
| GTGACCAGCTTAACAAATAA+GGG | + | chr5_2:28646865-28646884 | None:intergenic | 35.0% | |
| TGTGACCAGCTTAACAAATA+AGG | + | chr5_2:28646866-28646885 | None:intergenic | 35.0% | |
| !! | ACTTAACAAGGGTTGATATG+TGG | - | chr5_2:28646903-28646922 | Msa0766670:intron | 35.0% |
| ! | GTCTTTCTTGGTGATTGATT+AGG | + | chr5_2:28647314-28647333 | None:intergenic | 35.0% |
| GATTCATCTTCAGTCTTTCT+TGG | + | chr5_2:28647326-28647345 | None:intergenic | 35.0% | |
| AAAGACTGAAGATGAATCTG+AGG | - | chr5_2:28647328-28647347 | Msa0766670:intron | 35.0% | |
| GACACAAGAAAGATAAAGAG+AGG | - | chr5_2:28647480-28647499 | Msa0766670:intron | 35.0% | |
| ACAAGAAAGATAAAGAGAGG+AGG | - | chr5_2:28647483-28647502 | Msa0766670:intron | 35.0% | |
| ATTGAATACTCACTCCTCTT+GGG | - | chr5_2:28647519-28647538 | Msa0766670:intron | 35.0% | |
| TCGCATTGGATGATATTGAT+GGG | + | chr5_2:28647549-28647568 | None:intergenic | 35.0% | |
| TTCGCATTGGATGATATTGA+TGG | + | chr5_2:28647550-28647569 | None:intergenic | 35.0% | |
| !! | GCCATTTTGGCATTATTATG+AGG | - | chr5_2:28647671-28647690 | Msa0766670:intron | 35.0% |
| ATCAAGATACTTCATGAGCT+TGG | + | chr5_2:28647730-28647749 | None:intergenic | 35.0% | |
| ATTTATAGTTAGGCCTACCA+TGG | - | chr5_2:28647800-28647819 | Msa0766670:intron | 35.0% | |
| GTCAATAAGATAGCTTCTGA+TGG | - | chr5_2:28647905-28647924 | Msa0766670:intron | 35.0% | |
| ATCAGAAGATTCATTCCGAT+CGG | + | chr5_2:28647937-28647956 | None:intergenic | 35.0% | |
| ATCGGAATGAATCTTCTGAT+AGG | - | chr5_2:28647937-28647956 | Msa0766670:intron | 35.0% | |
| AGATACTCTCCGATAAATTG+AGG | - | chr5_2:28647973-28647992 | Msa0766670:exon | 35.0% | |
| GATACTCTCCGATAAATTGA+GGG | - | chr5_2:28647974-28647993 | Msa0766670:exon | 35.0% | |
| ATACTCTCCGATAAATTGAG+GGG | - | chr5_2:28647975-28647994 | Msa0766670:exon | 35.0% | |
| !! | CATTTTGAGTCTGACTACAT+AGG | - | chr5_2:28648062-28648081 | Msa0766670:five_prime_UTR | 35.0% |
| TCTTCCAACAACAACGAAAG+GGG | + | chr5_2:28642667-28642686 | None:intergenic | 40.0% | |
| GTTCTTCCAACAACAACGAA+AGG | + | chr5_2:28642669-28642688 | None:intergenic | 40.0% | |
| ! | CGAGTTGGATGATACATGTT+TGG | + | chr5_2:28642734-28642753 | None:intergenic | 40.0% |
| AACATGTATCATCCAACTCG+AGG | - | chr5_2:28642734-28642753 | Msa0766670:three_prime_UTR | 40.0% | |
| GTTAAAATTCTGCTGCACGA+TGG | + | chr5_2:28643259-28643278 | None:intergenic | 40.0% | |
| ! | CACTTGAAGAGTGTGATCTA+AGG | + | chr5_2:28643579-28643598 | None:intergenic | 40.0% |
| CTTAGATCACACTCTTCAAG+TGG | - | chr5_2:28643577-28643596 | Msa0766670:intron | 40.0% | |
| AGCTTATAAATGTGACCGGA+GGG | + | chr5_2:28643655-28643674 | None:intergenic | 40.0% | |
| TAGCTTATAAATGTGACCGG+AGG | + | chr5_2:28643656-28643675 | None:intergenic | 40.0% | |
| AGCTTGAATAATACTCCCTC+TGG | + | chr5_2:28643830-28643849 | None:intergenic | 40.0% | |
| !! | GGGAGTATTATTCAAGCTGA+AGG | - | chr5_2:28643832-28643851 | Msa0766670:intron | 40.0% |
| TAGGATAAAGTGCAGGCTTA+AGG | + | chr5_2:28644248-28644267 | None:intergenic | 40.0% | |
| ! | AAGCACTGCATATGCTAAGT+TGG | - | chr5_2:28644365-28644384 | Msa0766670:intron | 40.0% |
| !! | ACTGCATATGCTAAGTTGGT+TGG | - | chr5_2:28644369-28644388 | Msa0766670:intron | 40.0% |
| AGAAGCTAGAAAGGTTGAAG+AGG | - | chr5_2:28644481-28644500 | Msa0766670:intron | 40.0% | |
| GAAGCTAGAAAGGTTGAAGA+GGG | - | chr5_2:28644482-28644501 | Msa0766670:intron | 40.0% | |
| CTACCCTTTATAAGCAACCT+AGG | + | chr5_2:28644553-28644572 | None:intergenic | 40.0% | |
| AGGTTGCTTATAAAGGGTAG+AGG | - | chr5_2:28644553-28644572 | Msa0766670:intron | 40.0% | |
| GGTTGCTTATAAAGGGTAGA+GGG | - | chr5_2:28644554-28644573 | Msa0766670:intron | 40.0% | |
| !!! | CAACAGGGAAAGACCTTTTT+TGG | - | chr5_2:28644658-28644677 | Msa0766670:intron | 40.0% |
| !!! | AGACCTTTTTTGGTATACCC+GGG | - | chr5_2:28644668-28644687 | Msa0766670:intron | 40.0% |
| TATCCCGGGTATACCAAAAA+AGG | + | chr5_2:28644674-28644693 | None:intergenic | 40.0% | |
| GTCCCAAAATGAAGAAATGG+AGG | - | chr5_2:28644698-28644717 | Msa0766670:intron | 40.0% | |
| ! | CAGCCTCCATTTCTTCATTT+TGG | + | chr5_2:28644704-28644723 | None:intergenic | 40.0% |
| TTATCAAGACGGTTACCTTG+AGG | + | chr5_2:28644813-28644832 | None:intergenic | 40.0% | |
| !!! | TTCAAGGTGTTGGTTTTGCA+AGG | - | chr5_2:28644910-28644929 | Msa0766670:intron | 40.0% |
| TTTGGATAAGAACAGCTAGG+TGG | - | chr5_2:28645054-28645073 | Msa0766670:intron | 40.0% | |
| TTGGATAAGAACAGCTAGGT+GGG | - | chr5_2:28645055-28645074 | Msa0766670:intron | 40.0% | |
| GGTAACTACTAACTACAGAG+AGG | + | chr5_2:28645299-28645318 | None:intergenic | 40.0% | |
| TTGACACATTGGACTCAAAC+TGG | + | chr5_2:28645981-28646000 | None:intergenic | 40.0% | |
| TGGCAGATGAGAAACATGAA+TGG | - | chr5_2:28646218-28646237 | Msa0766670:intron | 40.0% | |
| TACAAAAATGAACCGGTAGC+AGG | - | chr5_2:28646317-28646336 | Msa0766670:intron | 40.0% | |
| !! | TATTGGTGTGCAAGAGTGTT+AGG | - | chr5_2:28646377-28646396 | Msa0766670:intron | 40.0% |
| !! | ATTGGTGTGCAAGAGTGTTA+GGG | - | chr5_2:28646378-28646397 | Msa0766670:intron | 40.0% |
| GTTGAAGGATCACAACAAAC+GGG | - | chr5_2:28646565-28646584 | Msa0766670:intron | 40.0% | |
| TTACTAGTGGTTTCAAGGGA+GGG | - | chr5_2:28646743-28646762 | Msa0766670:intron | 40.0% | |
| TTCCTCTACGTAAGATCCTA+GGG | + | chr5_2:28646817-28646836 | None:intergenic | 40.0% | |
| TTTCCTCTACGTAAGATCCT+AGG | + | chr5_2:28646818-28646837 | None:intergenic | 40.0% | |
| ! | CTTGGTGATTGATTAGGCAT+AGG | + | chr5_2:28647308-28647327 | None:intergenic | 40.0% |
| AAAAGAGAAGACGGGAAGAA+AGG | - | chr5_2:28647363-28647382 | Msa0766670:intron | 40.0% | |
| AGGAAGAGAAACGTGAAAAG+CGG | - | chr5_2:28647387-28647406 | Msa0766670:intron | 40.0% | |
| TCTCTTGCTTTCTTTCCTCA+CGG | + | chr5_2:28647418-28647437 | None:intergenic | 40.0% | |
| ATTCTCGTGATTCAGATGAC+AGG | - | chr5_2:28647453-28647472 | Msa0766670:intron | 40.0% | |
| AGAAAGATAAAGAGAGGAGG+AGG | - | chr5_2:28647486-28647505 | Msa0766670:intron | 40.0% | |
| GATTGAATACTCACTCCTCT+TGG | - | chr5_2:28647518-28647537 | Msa0766670:intron | 40.0% | |
| TATTGATGGGAAAACCCAAG+AGG | + | chr5_2:28647536-28647555 | None:intergenic | 40.0% | |
| TAACGGTAAATACAGGCTTC+TGG | + | chr5_2:28647628-28647647 | None:intergenic | 40.0% | |
| CAGACATGGGCAAAAATTCT+TGG | - | chr5_2:28647837-28647856 | Msa0766670:intron | 40.0% | |
| CATGGGCAAAAATTCTTGGA+AGG | - | chr5_2:28647841-28647860 | Msa0766670:intron | 40.0% | |
| TTCTGATGGAAAAAGCCGAT+CGG | - | chr5_2:28647919-28647938 | Msa0766670:intron | 40.0% | |
| CTTCTGATAGGTTTGTGCAT+TGG | - | chr5_2:28647949-28647968 | Msa0766670:CDS | 40.0% | |
| TCAAAGGCCCCTCAATTTAT+CGG | + | chr5_2:28647985-28648004 | None:intergenic | 40.0% | |
| ATGTATCATCCAACTCGAGG+TGG | - | chr5_2:28642737-28642756 | Msa0766670:three_prime_UTR | 45.0% | |
| TTGTGGAAATCAGGGTTGTG+TGG | + | chr5_2:28642935-28642954 | None:intergenic | 45.0% | |
| ! | TTAATTGGGGTTAGTGCAGC+AGG | + | chr5_2:28643542-28643561 | None:intergenic | 45.0% |
| TTCTTGAAGTGTACTCCCTC+CGG | - | chr5_2:28643637-28643656 | Msa0766670:intron | 45.0% | |
| GCAGGCTTAAGGAGAAACTT+AGG | + | chr5_2:28644237-28644256 | None:intergenic | 45.0% | |
| CTGAGGATAGGATAAAGTGC+AGG | + | chr5_2:28644255-28644274 | None:intergenic | 45.0% | |
| CTGCACTTTATCCTATCCTC+AGG | - | chr5_2:28644253-28644272 | Msa0766670:intron | 45.0% | |
| TACACATGTAGCCTGAGGAT+AGG | + | chr5_2:28644267-28644286 | None:intergenic | 45.0% | |
| AATTAAGGAAGAGGAGGAGC+AGG | - | chr5_2:28644743-28644762 | Msa0766670:intron | 45.0% | |
| ACAGCAGAAGACTTAGGTGA+AGG | - | chr5_2:28644867-28644886 | Msa0766670:intron | 45.0% | |
| GTAGCACATCAAACACACAC+TGG | + | chr5_2:28645215-28645234 | None:intergenic | 45.0% | |
| CTGTTTAAGTCGTAGGGTGT+TGG | + | chr5_2:28645809-28645828 | None:intergenic | 45.0% | |
| !!! | CATGAATGGTTTTAGTGGGG+AGG | - | chr5_2:28646232-28646251 | Msa0766670:intron | 45.0% |
| GTTACTAGTGGTTTCAAGGG+AGG | - | chr5_2:28646742-28646761 | Msa0766670:intron | 45.0% | |
| TACTAGTGGTTTCAAGGGAG+GGG | - | chr5_2:28646744-28646763 | Msa0766670:intron | 45.0% | |
| ! | ATGTGAGACCTTTGAGGAAC+CGG | + | chr5_2:28647261-28647280 | None:intergenic | 45.0% |
| TGGTGTATGTGAGACCTTTG+AGG | + | chr5_2:28647267-28647286 | None:intergenic | 45.0% | |
| ! | GGTACATTTTCTACCACAGC+TGG | + | chr5_2:28647287-28647306 | None:intergenic | 45.0% |
| CTCTTGCTTTCTTTCCTCAC+GGG | + | chr5_2:28647417-28647436 | None:intergenic | 45.0% | |
| !! | GGATATTGGCACTGCCATTT+TGG | - | chr5_2:28647658-28647677 | Msa0766670:intron | 45.0% |
| TTCAGGGTTGAGCAACCTAA+GGG | + | chr5_2:28647880-28647899 | None:intergenic | 45.0% | |
| TTTCAGGGTTGAGCAACCTA+AGG | + | chr5_2:28647881-28647900 | None:intergenic | 45.0% | |
| GGTTGCTCAACCCTGAAAAA+AGG | - | chr5_2:28647883-28647902 | Msa0766670:intron | 45.0% | |
| CGAACCCCTTTCGTTGTTGT+TGG | - | chr5_2:28642660-28642679 | Msa0766670:three_prime_UTR | 50.0% | |
| CATAGTCTCAAGGCTCCTGT+TGG | - | chr5_2:28643156-28643175 | Msa0766670:three_prime_UTR | 50.0% | |
| ! | TCAAGGCTCCTGTTGGTAGA+TGG | - | chr5_2:28643163-28643182 | Msa0766670:three_prime_UTR | 50.0% |
| CCTTTCTGCCATCTACCAAC+AGG | + | chr5_2:28643174-28643193 | None:intergenic | 50.0% | |
| ! | CCTGTTGGTAGATGGCAGAA+AGG | - | chr5_2:28643171-28643190 | Msa0766670:three_prime_UTR | 50.0% |
| AGCTGTACACATGTAGCCTG+AGG | + | chr5_2:28644272-28644291 | None:intergenic | 50.0% | |
| CCTAGGAGAAGGAAAGAGGA+TGG | + | chr5_2:28644536-28644555 | None:intergenic | 50.0% | |
| CCATCCTCTTTCCTTCTCCT+AGG | - | chr5_2:28644533-28644552 | Msa0766670:intron | 50.0% | |
| GCAACCTAGGAGAAGGAAAG+AGG | + | chr5_2:28644540-28644559 | None:intergenic | 50.0% | |
| GGGTCTACAGCAGAAGACTT+AGG | - | chr5_2:28644861-28644880 | Msa0766670:intron | 50.0% | |
| !! | TCGTAGGGTGTTGGATAGAG+AGG | + | chr5_2:28645800-28645819 | None:intergenic | 50.0% |
| CACCCTAGGATCTTACGTAG+AGG | - | chr5_2:28646812-28646831 | Msa0766670:intron | 50.0% | |
| ! | TGTGAGACCTTTGAGGAACC+GGG | + | chr5_2:28647260-28647279 | None:intergenic | 50.0% |
| GAGAAGACGGGAAGAAAGGA+AGG | - | chr5_2:28647367-28647386 | Msa0766670:intron | 50.0% | |
| ! | AGCAAGAGAAGCGTGAGAAG+CGG | - | chr5_2:28647429-28647448 | Msa0766670:intron | 50.0% |
| TTAGGCCTACCATGGTCCTA+GGG | - | chr5_2:28647808-28647827 | Msa0766670:intron | 50.0% | |
| AATGTCCCTAGGACCATGGT+AGG | + | chr5_2:28647816-28647835 | None:intergenic | 50.0% | |
| TCCTAGGGACATTGCAGACA+TGG | - | chr5_2:28647823-28647842 | Msa0766670:intron | 50.0% | |
| CCTAGGGACATTGCAGACAT+GGG | - | chr5_2:28647824-28647843 | Msa0766670:intron | 50.0% | |
| GGTTGCTCTATAGTCCCCTT+AGG | - | chr5_2:28647862-28647881 | Msa0766670:intron | 50.0% | |
| TCAGGGTTGAGCAACCTAAG+GGG | + | chr5_2:28647879-28647898 | None:intergenic | 50.0% | |
| GGGCCTTTGAGCAAACATGA+GGG | - | chr5_2:28647995-28648014 | Msa0766670:five_prime_UTR | 50.0% | |
| GGTCCCTCATGTTTGCTCAA+AGG | + | chr5_2:28648001-28648020 | None:intergenic | 50.0% | |
| ACTTACGATCTCGACCGCCA+CGG | + | chr5_2:28642766-28642785 | None:intergenic | 55.0% | |
| AAGAGGAGGAGCAGGCAATG+AGG | - | chr5_2:28644751-28644770 | Msa0766670:intron | 55.0% | |
| AGAGGAGGAGCAGGCAATGA+GGG | - | chr5_2:28644752-28644771 | Msa0766670:intron | 55.0% | |
| CAGGCAATGAGGGAAGCTCT+CGG | - | chr5_2:28644762-28644781 | Msa0766670:intron | 55.0% | |
| AATGAGGGAAGCTCTCGGCT+TGG | - | chr5_2:28644767-28644786 | Msa0766670:intron | 55.0% | |
| TGAGGACGACTAGCACGCTT+AGG | + | chr5_2:28644795-28644814 | None:intergenic | 55.0% | |
| AAGCGTGCTAGTCGTCCTCA+AGG | - | chr5_2:28644795-28644814 | Msa0766670:intron | 55.0% | |
| AAGGTCACGCTGAAGCAGCA+AGG | - | chr5_2:28644886-28644905 | Msa0766670:intron | 55.0% | |
| AGGTCACGCTGAAGCAGCAA+GGG | - | chr5_2:28644887-28644906 | Msa0766670:intron | 55.0% | |
| GCTGAAGCAGCAAGGGTTCA+AGG | - | chr5_2:28644894-28644913 | Msa0766670:intron | 55.0% | |
| GCAGCAAGGGTTCAAGGTGT+TGG | - | chr5_2:28644900-28644919 | Msa0766670:intron | 55.0% | |
| ACAGCTAGGTGGGTGACATC+TGG | - | chr5_2:28645065-28645084 | Msa0766670:intron | 55.0% | |
| ! | AGTGTTAGGGAGCGTGACCT+TGG | - | chr5_2:28646391-28646410 | Msa0766670:intron | 55.0% |
| TCAAGGGAGGGGAGTGGAAA+TGG | - | chr5_2:28646755-28646774 | Msa0766670:intron | 55.0% | |
| GGGGAGTGGAAATGGTTGGA+TGG | - | chr5_2:28646763-28646782 | Msa0766670:intron | 55.0% | |
| AGGAACCGGGTTCTTCCCAA+GGG | + | chr5_2:28647247-28647266 | None:intergenic | 55.0% | |
| GGAAGAACCCGGTTCCTCAA+AGG | - | chr5_2:28647250-28647269 | Msa0766670:intron | 55.0% | |
| GGTCTCACATACACCAGCTG+TGG | - | chr5_2:28647271-28647290 | Msa0766670:intron | 55.0% | |
| TGAAAAGCGGCATTCCCGTG+AGG | - | chr5_2:28647400-28647419 | Msa0766670:intron | 55.0% | |
| GTTAGGCCTACCATGGTCCT+AGG | - | chr5_2:28647807-28647826 | Msa0766670:intron | 55.0% | |
| CTGCAATGTCCCTAGGACCA+TGG | + | chr5_2:28647820-28647839 | None:intergenic | 55.0% | |
| CCCATGTCTGCAATGTCCCT+AGG | + | chr5_2:28647827-28647846 | None:intergenic | 55.0% | |
| GGGGCCTTTGAGCAAACATG+AGG | - | chr5_2:28647994-28648013 | Msa0766670:five_prime_UTR | 55.0% | |
| GTGGTTTCAAGGGAGGGGAG+TGG | - | chr5_2:28646749-28646768 | Msa0766670:intron | 60.0% | |
| GGGAGGGGAGTGGAAATGGT+TGG | - | chr5_2:28646759-28646778 | Msa0766670:intron | 60.0% | |
| TGTGCAGAGAACTCCGCCCT+TGG | - | chr5_2:28647228-28647247 | Msa0766670:intron | 60.0% | |
| GTGCAGAGAACTCCGCCCTT+GGG | - | chr5_2:28647229-28647248 | Msa0766670:intron | 60.0% | |
| AACCGGGTTCTTCCCAAGGG+CGG | + | chr5_2:28647244-28647263 | None:intergenic | 60.0% | |
| GAGGAACCGGGTTCTTCCCA+AGG | + | chr5_2:28647248-28647267 | None:intergenic | 60.0% | |
| CTCCGCCCTTGGGAAGAACC+CGG | - | chr5_2:28647239-28647258 | Msa0766670:intron | 65.0% | |
| CCACGGACGCCACCTCGAGT+TGG | + | chr5_2:28642749-28642768 | None:intergenic | 70.0% | |
| CCAACTCGAGGTGGCGTCCG+TGG | - | chr5_2:28642746-28642765 | Msa0766670:three_prime_UTR | 70.0% | |
| ACTCGAGGTGGCGTCCGTGG+CGG | - | chr5_2:28642749-28642768 | Msa0766670:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 28642631 | 28648095 | 28642631 | ID=Msa0766670;Name=Msa0766670 |
| chr5_2 | mRNA | 28642631 | 28648095 | 28642631 | ID=Msa0766670-mRNA-1;Parent=Msa0766670;Name=Msa0766670-mRNA-1;_AED=0.01;_eAED=0.01;_QI=106|1|1|1|1|1|4|572|229 |
| chr5_2 | exon | 28642631 | 28643491 | 28642631 | ID=Msa0766670-mRNA-1:exon:11034;Parent=Msa0766670-mRNA-1 |
| chr5_2 | exon | 28645795 | 28646062 | 28645795 | ID=Msa0766670-mRNA-1:exon:11033;Parent=Msa0766670-mRNA-1 |
| chr5_2 | exon | 28647534 | 28647623 | 28647534 | ID=Msa0766670-mRNA-1:exon:11032;Parent=Msa0766670-mRNA-1 |
| chr5_2 | exon | 28647947 | 28648095 | 28647947 | ID=Msa0766670-mRNA-1:exon:11031;Parent=Msa0766670-mRNA-1 |
| chr5_2 | five_prime_UTR | 28647990 | 28648095 | 28647990 | ID=Msa0766670-mRNA-1:five_prime_utr;Parent=Msa0766670-mRNA-1 |
| chr5_2 | CDS | 28647947 | 28647989 | 28647947 | ID=Msa0766670-mRNA-1:cds;Parent=Msa0766670-mRNA-1 |
| chr5_2 | CDS | 28647534 | 28647623 | 28647534 | ID=Msa0766670-mRNA-1:cds;Parent=Msa0766670-mRNA-1 |
| chr5_2 | CDS | 28645795 | 28646062 | 28645795 | ID=Msa0766670-mRNA-1:cds;Parent=Msa0766670-mRNA-1 |
| chr5_2 | CDS | 28643203 | 28643491 | 28643203 | ID=Msa0766670-mRNA-1:cds;Parent=Msa0766670-mRNA-1 |
| chr5_2 | three_prime_UTR | 28642631 | 28643202 | 28642631 | ID=Msa0766670-mRNA-1:three_prime_utr;Parent=Msa0766670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
